{
  "session": {
    "name": "GSE46127_RNAseq_expression",
    "description": "Auto-generated session for GSE46127 on 2026-03-31T16:03:19",
    "views": [
      {
        "id": "lgv1",
        "type": "LinearGenomeView",
        "tracks": [
          {
            "id": "F-8qwRhumS",
            "type": "FeatureTrack",
            "configuration": "Rat GRCr8 (rn8) Genes and Transcripts-GRCr8",
            "minimized": false,
            "displays": [
              {
                "id": "uZq89S4_XC",
                "type": "LinearBasicDisplay",
                "heightPreConfig": 152,
                "configuration": "Rat GRCr8 (rn8) Genes and Transcripts-GRCr8-LinearBasicDisplay"
              }
            ]
          },
          {
            "type": "QuantitativeTrack",
            "configuration": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124036",
            "displays": [
              {
                "type": "LinearWiggleDisplay",
                "displayId": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124036-LinearWiggleDisplay",
                "color": "#1f77b4",
                "defaultRendering": "xyplot"
              }
            ]
          },
          {
            "type": "QuantitativeTrack",
            "configuration": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124037",
            "displays": [
              {
                "type": "LinearWiggleDisplay",
                "displayId": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124037-LinearWiggleDisplay",
                "color": "#1f77b4",
                "defaultRendering": "xyplot"
              }
            ]
          },
          {
            "type": "QuantitativeTrack",
            "configuration": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124038",
            "displays": [
              {
                "type": "LinearWiggleDisplay",
                "displayId": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124038-LinearWiggleDisplay",
                "color": "#ff7f0e",
                "defaultRendering": "xyplot"
              }
            ]
          },
          {
            "type": "QuantitativeTrack",
            "configuration": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124039",
            "displays": [
              {
                "type": "LinearWiggleDisplay",
                "displayId": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124039-LinearWiggleDisplay",
                "color": "#ff7f0e",
                "defaultRendering": "xyplot"
              }
            ]
          },
          {
            "type": "QuantitativeTrack",
            "configuration": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124040",
            "displays": [
              {
                "type": "LinearWiggleDisplay",
                "displayId": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124040-LinearWiggleDisplay",
                "color": "#2ca02c",
                "defaultRendering": "xyplot"
              }
            ]
          },
          {
            "type": "QuantitativeTrack",
            "configuration": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124041",
            "displays": [
              {
                "type": "LinearWiggleDisplay",
                "displayId": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124041-LinearWiggleDisplay",
                "color": "#2ca02c",
                "defaultRendering": "xyplot"
              }
            ]
          },
          {
            "type": "QuantitativeTrack",
            "configuration": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124042",
            "displays": [
              {
                "type": "LinearWiggleDisplay",
                "displayId": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124042-LinearWiggleDisplay",
                "color": "#d62728",
                "defaultRendering": "xyplot"
              }
            ]
          },
          {
            "type": "QuantitativeTrack",
            "configuration": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124043",
            "displays": [
              {
                "type": "LinearWiggleDisplay",
                "displayId": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124043-LinearWiggleDisplay",
                "color": "#d62728",
                "defaultRendering": "xyplot"
              }
            ]
          }
        ],
        "displayedRegions": [
          {
            "assemblyName": "GRCr8",
            "refName": "Chr4",
            "start": 0,
            "end": 1000000000
          }
        ],
        "bpPerPx": 1090.9315,
        "offsetPx": 11288.767443235438
      }
    ],
    "sessionTracks": [
      {
        "type": "QuantitativeTrack",
        "trackId": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124036",
        "name": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124036",
        "category": [
          "RNA-Seq",
          "pineal_body",
          "NTac_SD"
        ],
        "assemblyNames": [
          "GRCr8"
        ],
        "metadata": {
          "Sample Characteristic": "-1.0d; control condition",
          "Tissue": "pineal_body",
          "Strain": "NTac_SD",
          "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=1566440",
          "Sex": "not_specified",
          "Computed Sex": "Undetermined",
          "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE46127",
          "Project Title": "Whole transcriptome profiling of the rat pineal gland during development from embryonic day 21 to adult",
          "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE46127",
          "Project Accession ID": "GSE46127",
          "Sample Accession ID": "GSM1124036",
          "PubMed ID": "PMID:24647753",
          "Data Processing": "HPC RGD workflow",
          "Read alignment": "STAR v2.7.10b",
          "Genome version": "GCF_036323735.1 GRCr8",
          "Expression Quantification": "RSEM v1.3.1"
        },
        "adapter": {
          "type": "BigWigAdapter",
          "bigWigLocation": {
            "locationType": "UriLocation",
            "uri": "https://download.rgd.mcw.edu/expression/GSE46127/Genome-wide_read_coverage_BigWig_files/RNAseq_pineal_body_NTac_SD_not_specified_GSM1124036.bigwig"
          }
        },
        "displays": [
          {
            "type": "LinearWiggleDisplay",
            "displayId": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124036-LinearWiggleDisplay",
            "renderer": {
              "type": "XYPlotRenderer",
              "color1": "#1f77b4"
            },
            "renderers": {
              "XYPlotRenderer": {
                "type": "XYPlotRenderer",
                "color1": "#1f77b4"
              }
            },
            "defaultRendering": "xyplot"
          }
        ]
      },
      {
        "type": "QuantitativeTrack",
        "trackId": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124037",
        "name": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124037",
        "category": [
          "RNA-Seq",
          "pineal_body",
          "NTac_SD"
        ],
        "assemblyNames": [
          "GRCr8"
        ],
        "metadata": {
          "Sample Characteristic": "-1.0d; control condition",
          "Tissue": "pineal_body",
          "Strain": "NTac_SD",
          "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=1566440",
          "Sex": "not_specified",
          "Computed Sex": "Undetermined",
          "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE46127",
          "Project Title": "Whole transcriptome profiling of the rat pineal gland during development from embryonic day 21 to adult",
          "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE46127",
          "Project Accession ID": "GSE46127",
          "Sample Accession ID": "GSM1124037",
          "PubMed ID": "PMID:24647753",
          "Data Processing": "HPC RGD workflow",
          "Read alignment": "STAR v2.7.10b",
          "Genome version": "GCF_036323735.1 GRCr8",
          "Expression Quantification": "RSEM v1.3.1"
        },
        "adapter": {
          "type": "BigWigAdapter",
          "bigWigLocation": {
            "locationType": "UriLocation",
            "uri": "https://download.rgd.mcw.edu/expression/GSE46127/Genome-wide_read_coverage_BigWig_files/RNAseq_pineal_body_NTac_SD_not_specified_GSM1124037.bigwig"
          }
        },
        "displays": [
          {
            "type": "LinearWiggleDisplay",
            "displayId": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124037-LinearWiggleDisplay",
            "renderer": {
              "type": "XYPlotRenderer",
              "color1": "#1f77b4"
            },
            "renderers": {
              "XYPlotRenderer": {
                "type": "XYPlotRenderer",
                "color1": "#1f77b4"
              }
            },
            "defaultRendering": "xyplot"
          }
        ]
      },
      {
        "type": "QuantitativeTrack",
        "trackId": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124038",
        "name": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124038",
        "category": [
          "RNA-Seq",
          "pineal_body",
          "NTac_SD"
        ],
        "assemblyNames": [
          "GRCr8"
        ],
        "metadata": {
          "Sample Characteristic": "5.0d; control condition",
          "Tissue": "pineal_body",
          "Strain": "NTac_SD",
          "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=1566440",
          "Sex": "not_specified",
          "Computed Sex": "Undetermined",
          "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE46127",
          "Project Title": "Whole transcriptome profiling of the rat pineal gland during development from embryonic day 21 to adult",
          "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE46127",
          "Project Accession ID": "GSE46127",
          "Sample Accession ID": "GSM1124038",
          "PubMed ID": "PMID:24647753",
          "Data Processing": "HPC RGD workflow",
          "Read alignment": "STAR v2.7.10b",
          "Genome version": "GCF_036323735.1 GRCr8",
          "Expression Quantification": "RSEM v1.3.1"
        },
        "adapter": {
          "type": "BigWigAdapter",
          "bigWigLocation": {
            "locationType": "UriLocation",
            "uri": "https://download.rgd.mcw.edu/expression/GSE46127/Genome-wide_read_coverage_BigWig_files/RNAseq_pineal_body_NTac_SD_not_specified_GSM1124038.bigwig"
          }
        },
        "displays": [
          {
            "type": "LinearWiggleDisplay",
            "displayId": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124038-LinearWiggleDisplay",
            "renderer": {
              "type": "XYPlotRenderer",
              "color1": "#ff7f0e"
            },
            "renderers": {
              "XYPlotRenderer": {
                "type": "XYPlotRenderer",
                "color1": "#ff7f0e"
              }
            },
            "defaultRendering": "xyplot"
          }
        ]
      },
      {
        "type": "QuantitativeTrack",
        "trackId": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124039",
        "name": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124039",
        "category": [
          "RNA-Seq",
          "pineal_body",
          "NTac_SD"
        ],
        "assemblyNames": [
          "GRCr8"
        ],
        "metadata": {
          "Sample Characteristic": "5.0d; control condition",
          "Tissue": "pineal_body",
          "Strain": "NTac_SD",
          "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=1566440",
          "Sex": "not_specified",
          "Computed Sex": "Undetermined",
          "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE46127",
          "Project Title": "Whole transcriptome profiling of the rat pineal gland during development from embryonic day 21 to adult",
          "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE46127",
          "Project Accession ID": "GSE46127",
          "Sample Accession ID": "GSM1124039",
          "PubMed ID": "PMID:24647753",
          "Data Processing": "HPC RGD workflow",
          "Read alignment": "STAR v2.7.10b",
          "Genome version": "GCF_036323735.1 GRCr8",
          "Expression Quantification": "RSEM v1.3.1"
        },
        "adapter": {
          "type": "BigWigAdapter",
          "bigWigLocation": {
            "locationType": "UriLocation",
            "uri": "https://download.rgd.mcw.edu/expression/GSE46127/Genome-wide_read_coverage_BigWig_files/RNAseq_pineal_body_NTac_SD_not_specified_GSM1124039.bigwig"
          }
        },
        "displays": [
          {
            "type": "LinearWiggleDisplay",
            "displayId": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124039-LinearWiggleDisplay",
            "renderer": {
              "type": "XYPlotRenderer",
              "color1": "#ff7f0e"
            },
            "renderers": {
              "XYPlotRenderer": {
                "type": "XYPlotRenderer",
                "color1": "#ff7f0e"
              }
            },
            "defaultRendering": "xyplot"
          }
        ]
      },
      {
        "type": "QuantitativeTrack",
        "trackId": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124040",
        "name": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124040",
        "category": [
          "RNA-Seq",
          "pineal_body",
          "NTac_SD"
        ],
        "assemblyNames": [
          "GRCr8"
        ],
        "metadata": {
          "Sample Characteristic": "20.0d; control condition",
          "Tissue": "pineal_body",
          "Strain": "NTac_SD",
          "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=1566440",
          "Sex": "not_specified",
          "Computed Sex": "Undetermined",
          "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE46127",
          "Project Title": "Whole transcriptome profiling of the rat pineal gland during development from embryonic day 21 to adult",
          "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE46127",
          "Project Accession ID": "GSE46127",
          "Sample Accession ID": "GSM1124040",
          "PubMed ID": "PMID:24647753",
          "Data Processing": "HPC RGD workflow",
          "Read alignment": "STAR v2.7.10b",
          "Genome version": "GCF_036323735.1 GRCr8",
          "Expression Quantification": "RSEM v1.3.1"
        },
        "adapter": {
          "type": "BigWigAdapter",
          "bigWigLocation": {
            "locationType": "UriLocation",
            "uri": "https://download.rgd.mcw.edu/expression/GSE46127/Genome-wide_read_coverage_BigWig_files/RNAseq_pineal_body_NTac_SD_not_specified_GSM1124040.bigwig"
          }
        },
        "displays": [
          {
            "type": "LinearWiggleDisplay",
            "displayId": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124040-LinearWiggleDisplay",
            "renderer": {
              "type": "XYPlotRenderer",
              "color1": "#2ca02c"
            },
            "renderers": {
              "XYPlotRenderer": {
                "type": "XYPlotRenderer",
                "color1": "#2ca02c"
              }
            },
            "defaultRendering": "xyplot"
          }
        ]
      },
      {
        "type": "QuantitativeTrack",
        "trackId": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124041",
        "name": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124041",
        "category": [
          "RNA-Seq",
          "pineal_body",
          "NTac_SD"
        ],
        "assemblyNames": [
          "GRCr8"
        ],
        "metadata": {
          "Sample Characteristic": "20.0d; control condition",
          "Tissue": "pineal_body",
          "Strain": "NTac_SD",
          "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=1566440",
          "Sex": "not_specified",
          "Computed Sex": "Undetermined",
          "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE46127",
          "Project Title": "Whole transcriptome profiling of the rat pineal gland during development from embryonic day 21 to adult",
          "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE46127",
          "Project Accession ID": "GSE46127",
          "Sample Accession ID": "GSM1124041",
          "PubMed ID": "PMID:24647753",
          "Data Processing": "HPC RGD workflow",
          "Read alignment": "STAR v2.7.10b",
          "Genome version": "GCF_036323735.1 GRCr8",
          "Expression Quantification": "RSEM v1.3.1"
        },
        "adapter": {
          "type": "BigWigAdapter",
          "bigWigLocation": {
            "locationType": "UriLocation",
            "uri": "https://download.rgd.mcw.edu/expression/GSE46127/Genome-wide_read_coverage_BigWig_files/RNAseq_pineal_body_NTac_SD_not_specified_GSM1124041.bigwig"
          }
        },
        "displays": [
          {
            "type": "LinearWiggleDisplay",
            "displayId": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124041-LinearWiggleDisplay",
            "renderer": {
              "type": "XYPlotRenderer",
              "color1": "#2ca02c"
            },
            "renderers": {
              "XYPlotRenderer": {
                "type": "XYPlotRenderer",
                "color1": "#2ca02c"
              }
            },
            "defaultRendering": "xyplot"
          }
        ]
      },
      {
        "type": "QuantitativeTrack",
        "trackId": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124042",
        "name": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124042",
        "category": [
          "RNA-Seq",
          "pineal_body",
          "NTac_SD"
        ],
        "assemblyNames": [
          "GRCr8"
        ],
        "metadata": {
          "Sample Characteristic": "40.0d; control condition",
          "Tissue": "pineal_body",
          "Strain": "NTac_SD",
          "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=1566440",
          "Sex": "not_specified",
          "Computed Sex": "Undetermined",
          "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE46127",
          "Project Title": "Whole transcriptome profiling of the rat pineal gland during development from embryonic day 21 to adult",
          "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE46127",
          "Project Accession ID": "GSE46127",
          "Sample Accession ID": "GSM1124042",
          "PubMed ID": "PMID:24647753",
          "Data Processing": "HPC RGD workflow",
          "Read alignment": "STAR v2.7.10b",
          "Genome version": "GCF_036323735.1 GRCr8",
          "Expression Quantification": "RSEM v1.3.1"
        },
        "adapter": {
          "type": "BigWigAdapter",
          "bigWigLocation": {
            "locationType": "UriLocation",
            "uri": "https://download.rgd.mcw.edu/expression/GSE46127/Genome-wide_read_coverage_BigWig_files/RNAseq_pineal_body_NTac_SD_not_specified_GSM1124042.bigwig"
          }
        },
        "displays": [
          {
            "type": "LinearWiggleDisplay",
            "displayId": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124042-LinearWiggleDisplay",
            "renderer": {
              "type": "XYPlotRenderer",
              "color1": "#d62728"
            },
            "renderers": {
              "XYPlotRenderer": {
                "type": "XYPlotRenderer",
                "color1": "#d62728"
              }
            },
            "defaultRendering": "xyplot"
          }
        ]
      },
      {
        "type": "QuantitativeTrack",
        "trackId": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124043",
        "name": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124043",
        "category": [
          "RNA-Seq",
          "pineal_body",
          "NTac_SD"
        ],
        "assemblyNames": [
          "GRCr8"
        ],
        "metadata": {
          "Sample Characteristic": "40.0d; control condition",
          "Tissue": "pineal_body",
          "Strain": "NTac_SD",
          "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=1566440",
          "Sex": "not_specified",
          "Computed Sex": "Undetermined",
          "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE46127",
          "Project Title": "Whole transcriptome profiling of the rat pineal gland during development from embryonic day 21 to adult",
          "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE46127",
          "Project Accession ID": "GSE46127",
          "Sample Accession ID": "GSM1124043",
          "PubMed ID": "PMID:24647753",
          "Data Processing": "HPC RGD workflow",
          "Read alignment": "STAR v2.7.10b",
          "Genome version": "GCF_036323735.1 GRCr8",
          "Expression Quantification": "RSEM v1.3.1"
        },
        "adapter": {
          "type": "BigWigAdapter",
          "bigWigLocation": {
            "locationType": "UriLocation",
            "uri": "https://download.rgd.mcw.edu/expression/GSE46127/Genome-wide_read_coverage_BigWig_files/RNAseq_pineal_body_NTac_SD_not_specified_GSM1124043.bigwig"
          }
        },
        "displays": [
          {
            "type": "LinearWiggleDisplay",
            "displayId": "RNAseq_pineal_body_NTac_SD_not_specified_GSM1124043-LinearWiggleDisplay",
            "renderer": {
              "type": "XYPlotRenderer",
              "color1": "#d62728"
            },
            "renderers": {
              "XYPlotRenderer": {
                "type": "XYPlotRenderer",
                "color1": "#d62728"
              }
            },
            "defaultRendering": "xyplot"
          }
        ]
      }
    ]
  }
}