{ "session": { "name": "GSE301731_RNAseq_expression", "description": "Auto-generated combined session for GSE301731 on 2026-05-17T15:47:44", "views": [ { "id": "lgv1", "type": "LinearGenomeView", "tracks": [ { "id": "F-8qwRhumS", "type": "FeatureTrack", "configuration": "Rat GRCr8 (rn8) Genes and Transcripts-GRCr8", "minimized": false, "displays": [ { "id": "uZq89S4_XC", "type": "LinearBasicDisplay", "heightPreConfig": 152, "configuration": "Rat GRCr8 (rn8) Genes and Transcripts-GRCr8-LinearBasicDisplay" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088135", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088135-LinearWiggleDisplay", "color": "#1f77b4", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088136", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088136-LinearWiggleDisplay", "color": "#1f77b4", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088137", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088137-LinearWiggleDisplay", "color": "#1f77b4", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088138", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088138-LinearWiggleDisplay", "color": "#ff7f0e", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088139", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088139-LinearWiggleDisplay", "color": "#ff7f0e", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088140", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088140-LinearWiggleDisplay", "color": "#ff7f0e", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088141", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088141-LinearWiggleDisplay", "color": "#2ca02c", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088142", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088142-LinearWiggleDisplay", "color": "#2ca02c", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088143", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088143-LinearWiggleDisplay", "color": "#2ca02c", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088144", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088144-LinearWiggleDisplay", "color": "#d62728", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088145", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088145-LinearWiggleDisplay", "color": "#d62728", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088146", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088146-LinearWiggleDisplay", "color": "#d62728", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088147", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088147-LinearWiggleDisplay", "color": "#9467bd", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088148", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088148-LinearWiggleDisplay", "color": "#9467bd", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088149", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088149-LinearWiggleDisplay", "color": "#9467bd", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088150", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088150-LinearWiggleDisplay", "color": "#8c564b", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088151", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088151-LinearWiggleDisplay", "color": "#8c564b", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088152", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088152-LinearWiggleDisplay", "color": "#8c564b", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088153", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088153-LinearWiggleDisplay", "color": "#e377c2", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088154", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088154-LinearWiggleDisplay", "color": "#d62728", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088155", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088155-LinearWiggleDisplay", "color": "#d62728", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088156", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088156-LinearWiggleDisplay", "color": "#d62728", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_SD-Rag2em2HeraIl2rgem1Hera_Crl_F_GSM9088157", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_SD-Rag2em2HeraIl2rgem1Hera_Crl_F_GSM9088157-LinearWiggleDisplay", "color": "#7f7f7f", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_SD-Rag2em2HeraIl2rgem1Hera_Crl_F_GSM9088158", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_SD-Rag2em2HeraIl2rgem1Hera_Crl_F_GSM9088158-LinearWiggleDisplay", "color": "#7f7f7f", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_SD-Rag2em2HeraIl2rgem1Hera_Crl_F_GSM9088159", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_SD-Rag2em2HeraIl2rgem1Hera_Crl_F_GSM9088159-LinearWiggleDisplay", "color": "#7f7f7f", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_SD-Rag2em2HeraIl2rgem1Hera_Crl_F_GSM9088160", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_SD-Rag2em2HeraIl2rgem1Hera_Crl_F_GSM9088160-LinearWiggleDisplay", "color": "#7f7f7f", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088161", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088161-LinearWiggleDisplay", "color": "#bcbd22", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088162", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088162-LinearWiggleDisplay", "color": "#bcbd22", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088163", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088163-LinearWiggleDisplay", "color": "#bcbd22", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088164", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088164-LinearWiggleDisplay", "color": "#bcbd22", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088165", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088165-LinearWiggleDisplay", "color": "#17becf", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088166", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088166-LinearWiggleDisplay", "color": "#17becf", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088167", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088167-LinearWiggleDisplay", "color": "#17becf", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088168", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088168-LinearWiggleDisplay", "color": "#17becf", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088169", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088169-LinearWiggleDisplay", "color": "#17becf", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088170", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088170-LinearWiggleDisplay", "color": "#1f77b4", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088171", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088171-LinearWiggleDisplay", "color": "#1f77b4", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088172", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088172-LinearWiggleDisplay", "color": "#1f77b4", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088173", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088173-LinearWiggleDisplay", "color": "#ff7f0e", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088174", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088174-LinearWiggleDisplay", "color": "#ff7f0e", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_skin_of_back_Crl_SD_F_GSM9088175", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088175-LinearWiggleDisplay", "color": "#2ca02c", "defaultRendering": "xyplot" } ] } ], "displayedRegions": [ { "assemblyName": "GRCr8", "refName": "Chr4", "start": 0, "end": 1000000000 } ], "bpPerPx": 1090.9315, "offsetPx": 11288.767443235438 } ], "sessionTracks": [ { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088135", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088135", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;vehicle control condition;water", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_se66", "Sample Accession ID": "GSM9088135", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088135.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088135-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088136", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088136", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;vehicle control condition;water", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_se66", "Sample Accession ID": "GSM9088136", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088136.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088136-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088137", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088137", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;vehicle control condition;water", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_se66", "Sample Accession ID": "GSM9088137", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088137.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088137-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088138", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088138", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;vehicle control condition;125.0 ug/ml iron trichloride", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_se66", "Sample Accession ID": "GSM9088138", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088138.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088138-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088139", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088139", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;vehicle control condition;125.0 ug/ml iron trichloride", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_se66", "Sample Accession ID": "GSM9088139", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088139.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088139-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088140", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088140", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;vehicle control condition;125.0 ug/ml iron trichloride", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_se66", "Sample Accession ID": "GSM9088140", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088140.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088140-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088141", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088141", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;10.0 mg/kg dihydrotachysterol;water", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_se66", "Sample Accession ID": "GSM9088141", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088141.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088141-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088142", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088142", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;10.0 mg/kg dihydrotachysterol;water", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_se66", "Sample Accession ID": "GSM9088142", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088142.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088142-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088143", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088143", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;10.0 mg/kg dihydrotachysterol;water", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_se66", "Sample Accession ID": "GSM9088143", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088143.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088143-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088144", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088144", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;10.0 mg/kg dihydrotachysterol;125.0 ug/ml iron trichloride", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_se66", "Sample Accession ID": "GSM9088144", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088144.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088144-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#d62728" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#d62728" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088145", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088145", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;10.0 mg/kg dihydrotachysterol;125.0 ug/ml iron trichloride", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_se66", "Sample Accession ID": "GSM9088145", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088145.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088145-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#d62728" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#d62728" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088146", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088146", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;10.0 mg/kg dihydrotachysterol;125.0 ug/ml iron trichloride", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_se66", "Sample Accession ID": "GSM9088146", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088146.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088146-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#d62728" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#d62728" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088147", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088147", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;vehicle control condition;lipopolysaccharide", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891\r", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_pe100", "Sample Accession ID": "GSM9088147", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088147.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088147-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#9467bd" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#9467bd" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088148", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088148", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;vehicle control condition;lipopolysaccharide", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891\r", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_pe100", "Sample Accession ID": "GSM9088148", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088148.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088148-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#9467bd" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#9467bd" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088149", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088149", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;vehicle control condition;lipopolysaccharide", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891\r", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_pe100", "Sample Accession ID": "GSM9088149", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088149.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088149-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#9467bd" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#9467bd" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088150", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088150", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;10.0 mg/kg dihydrotachysterol;lipopolysaccharide", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891\r", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_pe100", "Sample Accession ID": "GSM9088150", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088150.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088150-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#8c564b" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#8c564b" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088151", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088151", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;10.0 mg/kg dihydrotachysterol;lipopolysaccharide", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891\r", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_pe100", "Sample Accession ID": "GSM9088151", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088151.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088151-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#8c564b" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#8c564b" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088152", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088152", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;10.0 mg/kg dihydrotachysterol;lipopolysaccharide", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891\r", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_pe100", "Sample Accession ID": "GSM9088152", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088152.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088152-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#8c564b" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#8c564b" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088153", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088153", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;10.0 mg/kg dihydrotachysterol;125.0 ug/ml irontrichloride", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_se50", "Sample Accession ID": "GSM9088153", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088153.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088153-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#e377c2" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#e377c2" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088154", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088154", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;10.0 mg/kg dihydrotachysterol;125.0 ug/ml iron trichloride", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_se50", "Sample Accession ID": "GSM9088154", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088154.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088154-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#d62728" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#d62728" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088155", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088155", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;10.0 mg/kg dihydrotachysterol;125.0 ug/ml iron trichloride", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_se50", "Sample Accession ID": "GSM9088155", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088155.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088155-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#d62728" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#d62728" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088156", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088156", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;10.0 mg/kg dihydrotachysterol;125.0 ug/ml iron trichloride", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_se50", "Sample Accession ID": "GSM9088156", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088156.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088156-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#d62728" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#d62728" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_SD-Rag2em2HeraIl2rgem1Hera_Crl_F_GSM9088157", "name": "RNAseq_skin_of_back_SD-Rag2em2HeraIl2rgem1Hera_Crl_F_GSM9088157", "category": [ "RNA-Seq", "skin_of_back", "SD-Rag2em2HeraIl2rgem1Hera_Crl" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;10.0 mg/kg dihydrotachysterol;125.0 ug/ml iron trichloride", "Tissue": "skin_of_back", "Strain": "SD-Rag2em2HeraIl2rgem1Hera_Crl", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=645123288", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_se50", "Sample Accession ID": "GSM9088157", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_SD-Rag2em2HeraIl2rgem1Hera_Crl_F_GSM9088157.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_SD-Rag2em2HeraIl2rgem1Hera_Crl_F_GSM9088157-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#7f7f7f" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#7f7f7f" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_SD-Rag2em2HeraIl2rgem1Hera_Crl_F_GSM9088158", "name": "RNAseq_skin_of_back_SD-Rag2em2HeraIl2rgem1Hera_Crl_F_GSM9088158", "category": [ "RNA-Seq", "skin_of_back", "SD-Rag2em2HeraIl2rgem1Hera_Crl" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;10.0 mg/kg dihydrotachysterol;125.0 ug/ml iron trichloride", "Tissue": "skin_of_back", "Strain": "SD-Rag2em2HeraIl2rgem1Hera_Crl", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=645123288", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_se50", "Sample Accession ID": "GSM9088158", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_SD-Rag2em2HeraIl2rgem1Hera_Crl_F_GSM9088158.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_SD-Rag2em2HeraIl2rgem1Hera_Crl_F_GSM9088158-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#7f7f7f" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#7f7f7f" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_SD-Rag2em2HeraIl2rgem1Hera_Crl_F_GSM9088159", "name": "RNAseq_skin_of_back_SD-Rag2em2HeraIl2rgem1Hera_Crl_F_GSM9088159", "category": [ "RNA-Seq", "skin_of_back", "SD-Rag2em2HeraIl2rgem1Hera_Crl" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;10.0 mg/kg dihydrotachysterol;125.0 ug/ml iron trichloride", "Tissue": "skin_of_back", "Strain": "SD-Rag2em2HeraIl2rgem1Hera_Crl", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=645123288", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_se50", "Sample Accession ID": "GSM9088159", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_SD-Rag2em2HeraIl2rgem1Hera_Crl_F_GSM9088159.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_SD-Rag2em2HeraIl2rgem1Hera_Crl_F_GSM9088159-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#7f7f7f" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#7f7f7f" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_SD-Rag2em2HeraIl2rgem1Hera_Crl_F_GSM9088160", "name": "RNAseq_skin_of_back_SD-Rag2em2HeraIl2rgem1Hera_Crl_F_GSM9088160", "category": [ "RNA-Seq", "skin_of_back", "SD-Rag2em2HeraIl2rgem1Hera_Crl" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;10.0 mg/kg dihydrotachysterol;125.0 ug/ml iron trichloride", "Tissue": "skin_of_back", "Strain": "SD-Rag2em2HeraIl2rgem1Hera_Crl", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=645123288", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_se50", "Sample Accession ID": "GSM9088160", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_SD-Rag2em2HeraIl2rgem1Hera_Crl_F_GSM9088160.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_SD-Rag2em2HeraIl2rgem1Hera_Crl_F_GSM9088160-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#7f7f7f" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#7f7f7f" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088161", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088161", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;phosphate buffered saline;phosphate buffered saline;10.0 mg/kg dihydrotachysterol;125.0 ug/ml iron trichloride;phosphate buffered saline", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_se66", "Sample Accession ID": "GSM9088161", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088161.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088161-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#bcbd22" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#bcbd22" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088162", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088162", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;phosphate buffered saline;phosphate buffered saline;10.0 mg/kg dihydrotachysterol;125.0 ug/ml iron trichloride;phosphate buffered saline", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_se66", "Sample Accession ID": "GSM9088162", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088162.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088162-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#bcbd22" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#bcbd22" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088163", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088163", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;phosphate buffered saline;phosphate buffered saline;10.0 mg/kg dihydrotachysterol;125.0 ug/ml iron trichloride;phosphate buffered saline", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_se66", "Sample Accession ID": "GSM9088163", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088163.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088163-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#bcbd22" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#bcbd22" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088164", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088164", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;phosphate buffered saline;phosphate buffered saline;10.0 mg/kg dihydrotachysterol;125.0 ug/ml iron trichloride;phosphate buffered saline", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_se66", "Sample Accession ID": "GSM9088164", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088164.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088164-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#bcbd22" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#bcbd22" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088165", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088165", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;150.0 mg/kg cyclophosphamide;10.0 mg/kg dihydrotachysterol;100.0 mg/kg cyclophosphamide;125.0 ug/ml iron trichloride;50.0 mg/kg cyclophosphamide", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_se66", "Sample Accession ID": "GSM9088165", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088165.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088165-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#17becf" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#17becf" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088166", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088166", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;150.0 mg/kg cyclophosphamide;10.0 mg/kg dihydrotachysterol;100.0 mg/kg cyclophosphamide;125.0 ug/ml iron trichloride;50.0 mg/kg cyclophosphamide", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_se66", "Sample Accession ID": "GSM9088166", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088166.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088166-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#17becf" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#17becf" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088167", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088167", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;150.0 mg/kg cyclophosphamide;10.0 mg/kg dihydrotachysterol;100.0 mg/kg cyclophosphamide;125.0 ug/ml iron trichloride;50.0 mg/kg cyclophosphamide", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_se66", "Sample Accession ID": "GSM9088167", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088167.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088167-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#17becf" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#17becf" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088168", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088168", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;150.0 mg/kg cyclophosphamide;10.0 mg/kg dihydrotachysterol;100.0 mg/kg cyclophosphamide;125.0 ug/ml iron trichloride;50.0 mg/kg cyclophosphamide", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_se66", "Sample Accession ID": "GSM9088168", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088168.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088168-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#17becf" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#17becf" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088169", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088169", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;150.0 mg/kg cyclophosphamide;10.0 mg/kg dihydrotachysterol;100.0 mg/kg cyclophosphamide;125.0 ug/ml iron trichloride;50.0 mg/kg cyclophosphamide", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_se66", "Sample Accession ID": "GSM9088169", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088169.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088169-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#17becf" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#17becf" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088170", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088170", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;4.0 mg/kg control IgG monoclonal antibody;10.0 mg/kg dihydrotachysterol;125.0 ug/ml iron trichloride;4.0 mg/kg control IgG monoclonal antibody", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891\r", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_pe50", "Sample Accession ID": "GSM9088170", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088170.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088170-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088171", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088171", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;4.0 mg/kg control IgG monoclonal antibody;10.0 mg/kg dihydrotachysterol;125.0 ug/ml iron trichloride;4.0 mg/kg control IgG monoclonal antibody", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891\r", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_pe50", "Sample Accession ID": "GSM9088171", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088171.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088171-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088172", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088172", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;4.0 mg/kg control IgG monoclonal antibody;10.0 mg/kg dihydrotachysterol;125.0 ug/ml iron trichloride;4.0 mg/kg control IgG monoclonal antibody", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891\r", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_pe50", "Sample Accession ID": "GSM9088172", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088172.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088172-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088173", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088173", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;4.0 mg/kg anti-interleukin-17A antibody;10.0 mg/kg dihydrotachysterol;125.0 ug/ml iron trichloride;4.0 mg/kg anti-interleukin-17A antibody", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891\r", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_pe50", "Sample Accession ID": "GSM9088173", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088173.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088173-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088174", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088174", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;4.0 mg/kg anti-interleukin-17A antibody;10.0 mg/kg dihydrotachysterol;125.0 ug/ml iron trichloride;4.0 mg/kg anti-interleukin-17A antibody", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891\r", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_pe50", "Sample Accession ID": "GSM9088174", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088174.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088174-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088175", "name": "RNAseq_skin_of_back_Crl_SD_F_GSM9088175", "category": [ "RNA-Seq", "skin_of_back", "Crl_SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "32.0-46.0d;4.0 mg/kg anti-interleukin-17A antibody;10.0 mg/kg dihydrotachysterol;4.0 mg/kg anti-interleukin-17A antibody;125.0 ug/ml iron trichloride", "Tissue": "skin_of_back", "Strain": "Crl_SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=737891\r", "Sex": "F", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE301731", "Project Title": "Pharmacological Targeting of IL17/neutrophil axis to Treat Calciphylaxis", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301731", "Project Accession ID": "GSE301731_pe50", "Sample Accession ID": "GSM9088175", "PubMed ID": "PMID:41031886", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE301731/Genome-wide_read_coverage_BigWig_files/RNAseq_skin_of_back_Crl_SD_F_GSM9088175.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_skin_of_back_Crl_SD_F_GSM9088175-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" } }, "defaultRendering": "xyplot" } ] } ] } }