# RGD-PIPELINE: ftp-file-extracts # MODULE: genes build 2025-08-22 # GENERATED-ON: 2026/04/11 # PURPOSE: information about active Black Rat genes extracted from RGD database # SPECIES: Rattus rattus (black rat) NCBI:txid10117 # CONTACT: rgd.data@mcw.edu # FORMAT: tab delimited text # NOTES: multiple values in a single column are separated by ';' # #COLUMN INFORMATION: # (First 38 columns are in common between all species) # #1 GENE_RGD_ID the RGD_ID of the gene #2 SYMBOL official gene symbol #3 NAME gene name #4 GENE_DESC gene description (if available) #5 (UNUSED) blank #6 CHROMOSOME_1 chromosome for reference assembly build 1 #7 (UNUSED) blank #8 FISH_BAND fish band information #9 (UNUSED) blank #10 (UNUSED) blank #11 (UNUSED) blank #12 START_POS_1 start position for reference assembly build 1 #13 STOP_POS_1 stop position for reference assembly build 1 #14 STRAND_1 strand information for reference assembly build 1 #15 (UNUSED) blank #16 (UNUSED) blank #17 (UNUSED) blank #18 CURATED_REF_RGD_ID RGD_ID of paper(s) used to curate gene #19 CURATED_REF_PUBMED_ID PUBMED_ID of paper(s) used to curate gene #20 UNCURATED_PUBMED_ID PUBMED ids of papers associated with the gene at NCBI but not used for curation #21 NCBI_GENE_ID NCBI Gene ID #22 UNIPROT_ID UniProtKB id(s) #23 GENE_REFSEQ_STATUS gene RefSeq Status (from NCBI) #24 GENBANK_NUCLEOTIDE GenBank Nucleotide ID(s) #25 (UNUSED) blank #26 GENBANK_PROTEIN GenBank Protein ID(s) #27 CANONICAL_PROTEIN UniProt canonical protein(s) #28 MARKER_RGD_ID RGD_ID(s) of markers associated with given gene #29 MARKER_SYMBOL marker symbol #30 OLD_SYMBOL old symbol alias(es) #31 OLD_NAME old name alias(es) #32 QTL_RGD_ID RGD_ID(s) of QTLs associated with given gene #33 QTL_SYMBOL QTL symbol #34 NOMENCLATURE_STATUS nomenclature status #35 (UNUSED) blank #36 (UNUSED) blank #37 GENE_TYPE gene type #38 ENSEMBL_ID Ensembl Gene ID #39 CHROMOSOME_ENSEMBL chromosome for primary Ensembl assembly #40 START_POS_ENSEMBL start position for primary Ensembl assembly #41 STOP_POS_ENSEMBL stop position for primary Ensembl assembly #42 STRAND_ENSEMBL strand information for primary Ensembl assembly GENE_RGD_ID SYMBOL NAME GENE_DESC (UNUSED) CHROMOSOME_1 (UNUSED) FISH_BAND (UNUSED) (UNUSED) (UNUSED) START_POS_1 STOP_POS_1 STRAND_1 (UNUSED) (UNUSED) (UNUSED) CURATED_REF_RGD_ID CURATED_REF_PUBMED_ID UNCURATED_PUBMED_ID NCBI_GENE_ID UNIPROT_ID GENE_REFSEQ_STATUS GENBANK_NUCLEOTIDE (UNUSED) GENBANK_PROTEIN CANONICAL_PROTEIN MARKER_RGD_ID MARKER_SYMBOL OLD_SYMBOL OLD_NAME QTL_RGD_ID QTL_SYMBOL NOMENCLATURE_STATUS (UNUSED) (UNUSED) GENE_TYPE ENSEMBL_ID CHROMOSOME_ENSEMBL START_POS_ENSEMBL STOP_POS_ENSEMBL STRAND_ENSEMBL 625831825 Atp10a ATPase phospholipid transporting 10A (putative) ENCODES a protein that exhibits glycosylceramide flippase activity (ortholog); phosphatidylcholine flippase activity (ortholog); INVOLVED IN positive regulation of membrane tubulation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN endoplasmic reticulum (ortholog); phospholipid-translocating ATPase complex (ortholog); plasma membrane (ortholog) 2 140515396 140675229 - 22301074;30032202 116892035 MODEL JAAIVD010000001;XM_032893496 XP_032749387 probable phospholipid-transporting ATPase VA protein-coding 625831850 Otud6b OTU deubiquitinase 6B ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); INVOLVED IN cell population proliferation (ortholog); negative regulation of translation (ortholog); positive regulation of translation (ortholog); ASSOCIATED WITH epilepsy (ortholog); genetic disease (ortholog); Intellectual Developmental Disorder with Dysmorphic Facies, Seizures, and Distal Limb Anomalies (ortholog); FOUND IN eukaryotic translation initiation factor 4F complex (ortholog) 1 128967657 128984459 + 30032202 116903227 MODEL JAAIVD010000025;XM_032905604;XM_032905612 XP_032761495;XP_032761503 deubiquitinase OTUD6B protein-coding 625831867 Rgr retinal G protein coupled receptor INVOLVED IN retinoid metabolic process (ortholog); ASSOCIATED WITH cone dystrophy (ortholog); fundus dystrophy (ortholog); optic atrophy (ortholog); FOUND IN plasma membrane (ortholog) 13 15507534 15521159 - 22301074 116914811 MODEL JAAIVD010000008;XM_032919266;XM_032919267 XP_032775157;XP_032775158 RPE-retinal G protein-coupled receptor protein-coding 625831878 LOC116911775 uncharacterized LOC116911775 10 17987385 17990312 - 116911775 MODEL JAAIVD010000005;XR_004389341 ncrna 625831884 Krt28 keratin 28 9 55071568 55081968 + 22301074;30032202 116908966 MODEL JAAIVD010000002;XM_032912427;XM_032912428 XP_032768318;XP_032768319 keratin, type I cytoskeletal 28 protein-coding 625831897 Marchf9 membrane associated ring-CH-type finger 9 ASSOCIATED WITH familial melanoma (ortholog); FOUND IN Golgi stack (ortholog); trans-Golgi network (ortholog) 1 205485322 205489574 - 22301074;30032202 116909782 MODEL JAAIVD010000025;XM_032913477 XP_032769368 E3 ubiquitin-protein ligase MARCH9 protein-coding 625831905 LOC116904666 U7 small nuclear RNA 6 41070870 41070928 - 116904666 MODEL JAAIVD010000024;XR_004388366 snrna 625831908 LOC116914866 neutrophil antibiotic peptide NP-4-like 13 64854640 64856811 - 22301074;30032202 116914866 MODEL JAAIVD010000008;XM_032919313 XP_032775204 protein-coding 625831915 Proser2 proline and serine rich 2 14 12423954 12436932 - 116883823 MODEL JAAIVD010000009;XM_032885077 XP_032740968 proline and serine-rich protein 2 protein-coding 625831922 Caln1 calneuron 1 INVOLVED IN gene expression (ortholog); Golgi organization (ortholog); long-term synaptic potentiation (ortholog); FOUND IN trans-Golgi network membrane (ortholog) 16 23133275 23595767 - 22301074 116885565 MODEL JAAIVD010000004;XM_032886858;XM_032886859 XP_032742749;XP_032742750 calcium-binding protein 8 protein-coding 625831936 LOC116914142 small nucleolar RNA SNORA17 12 27118514 27118645 + 116914142 MODEL JAAIVD010000007;XR_004389700 snorna 625831939 Shf Src homology 2 domain containing F PARTICIPATES IN platelet-derived growth factor signaling pathway 5 100456841 100476437 - 30032202 116901888 MODEL JAAIVD010000023;XM_032904095;XM_032904096;XM_032904097 XP_032759986;XP_032759987;XP_032759988 SH2 domain-containing adapter protein F protein-coding 625831952 Trnak-cuu transfer RNA lysine (anticodon CUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 863712 863784 + 116910800 MODEL JAAIVD010000002 trna 625831953 Hoxd4 homeobox D4 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic organ development (ortholog); embryonic skeletal system morphogenesis (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); FOUND IN nucleoplasm (ortholog) 5 52053254 52070463 + 22301074;30032202 116901532 MODEL JAAIVD010000023;XM_032903512 XP_032759403 homeobox protein Hox-D4 protein-coding 625831963 Sorcs3 sortilin related VPS10 domain containing receptor 3 INVOLVED IN learning (ortholog); memory (ortholog); positive regulation of synaptic transmission (ortholog); FOUND IN glutamatergic synapse (ortholog); plasma membrane (ortholog); postsynaptic density (ortholog) 2 47724147 48341429 + 22301074;30032202 116891276 MODEL JAAIVD010000001;XM_032892177 XP_032748068 VPS10 domain-containing receptor SorCS3 protein-coding 625831994 Mrpl46 mitochondrial ribosomal protein L46 ASSOCIATED WITH prostate cancer (ortholog); FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 2 121461366 121470106 + 30032202 116891955 MODEL JAAIVD010000001;XM_032893397 XP_032749288 39S ribosomal protein L46, mitochondrial protein-coding 625832002 Gzma granzyme A ENCODES a protein that exhibits protein homodimerization activity (ortholog); serine-type endopeptidase activity (ortholog); serine-type peptidase activity (ortholog); INVOLVED IN cytotoxic T cell pyroptotic cell death (ortholog); granzyme-mediated programmed cell death signaling pathway (ortholog); positive regulation of apoptotic process (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH chronic obstructive pulmonary disease (ortholog); Experimental Liver Cirrhosis (ortholog); pulmonary tuberculosis (ortholog); FOUND IN cytolytic granule (ortholog); cytoplasm (ortholog); extracellular region (ortholog) 3 183671524 183683071 + 22301074;30032202 116895651 MODEL JAAIVD010000012;XM_032896857 XP_032752748 protein-coding 625832011 LOC116898469 elongation factor 1-alpha 1-like 4 108133937 108197521 + 116898469 MODEL JAAIVD010000003 pseudo 625832012 Fancl FA complementation group L ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin protein ligase binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); gamete generation (ortholog); ASSOCIATED WITH 46 XX gonadal dysgenesis (ortholog); Fanconi anemia (ortholog); Fanconi anemia complementation group A (ortholog); FOUND IN chromatin (ortholog); Fanconi anaemia nuclear complex (ortholog); nuclear envelope (ortholog) 11 91222600 91289554 + 30032202 116912388 MODEL JAAIVD010000006;XM_032916447 XP_032772338 E3 ubiquitin-protein ligase FANCL protein-coding 625832030 Dync1i2 dynein cytoplasmic 1 intermediate chain 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); negative regulation of neuron projection development (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY AND STRUCTURAL BRAIN ANOMALIES (ortholog); NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY, HYPOTONIA, AND VARIABLE BRAIN ANOMALIES (ortholog); FOUND IN centrosome (ortholog); microtubule (ortholog); outer dynein arm (ortholog) 5 48506236 48555946 + 22301074;30032202 116901502 MODEL JAAIVD010000023;XM_032903471;XM_032903472 XP_032759362;XP_032759363 cytoplasmic dynein 1 intermediate chain 2 protein-coding 625832057 LOC116908168 uncharacterized LOC116908168 8 45583973 45588418 - 116908168 MODEL JAAIVD010000027;XM_032911466 XP_032767357 uncharacterized protein LOC116908168 protein-coding 625832065 LOC116891645 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like 2 88727669 88728101 + 116891645 MODEL JAAIVD010000001;XM_032892878 XP_032748769 protein-coding 625832070 Trnaf-gaa transfer RNA phenylalanine (anticodon GAA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 80991408 80991480 - 116895144 MODEL JAAIVD010000001 trna 625832071 LOC116902044 protein PET117 homolog, mitochondrial ASSOCIATED WITH mitochondrial complex IV deficiency nuclear type 19 (ortholog); FOUND IN mitochondrion (ortholog) 5 124009767 124014801 + 30032202 116902044 MODEL JAAIVD010000023;XM_032904329 XP_032760220 protein-coding 625832077 LOC116890410 U6 spliceosomal RNA 1 60469957 60470055 + 116890410 MODEL JAAIVD010000025 pseudo 625832078 LOC116906720 zinc finger protein 878-like 1 157258471 157262728 - 30032202 116906720 MODEL JAAIVD010000025;XM_032909534 XP_032765425 protein-coding 625832085 LOC116897839 zinc finger protein 136-like 4 13454044 13456189 + 30032202 116897839 MODEL JAAIVD010000003;XM_032899255 XP_032755146 protein-coding 625832091 Cd9 CD9 molecule ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN cell adhesion (ortholog); cellular response to low-density lipoprotein particle stimulus (ortholog); fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); breast carcinoma (ortholog); cervix carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); external side of plasma membrane (ortholog) 6 22411190 22444271 + 22301074;30032202 116903247 MODEL JAAIVD010000024;XM_032905626 XP_032761517 CD9 antigen protein-coding 625832103 Rcan1 regulator of calcineurin 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein phosphatase inhibitor activity (ortholog); INVOLVED IN calcineurin-NFAT signaling cascade (ortholog); locomotion involved in locomotory behavior (ortholog); negative regulation of calcineurin-NFAT signaling cascade (ortholog); PARTICIPATES IN calcineurin signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Cardiomegaly (ortholog); congenital heart disease (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 4 52155120 52232081 + 22301074;30032202 116898980 MODEL JAAIVD010000003;XM_032900405;XM_032900406 XP_032756296;XP_032756297 calcipressin-1 protein-coding 625832114 LOC116890542 U1 spliceosomal RNA 1 58371886 58372047 + 116890542 MODEL JAAIVD010000025;XR_004386722 snrna 625832117 Scn2b sodium voltage-gated channel beta subunit 2 ENCODES a protein that exhibits sodium channel regulator activity (ortholog); voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization (ortholog); voltage-gated sodium channel activity (ortholog); INVOLVED IN cardiac conduction (ortholog); cardiac muscle cell action potential involved in contraction (ortholog); cardiac muscle contraction (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); Experimental Seizures (ortholog); Familial Atrial Fibrillation 14 (ortholog); FOUND IN axon initial segment (ortholog); node of Ranvier (ortholog); plasma membrane (ortholog) 8 39651877 39664058 + 22301074;30032202 116906895 MODEL JAAIVD010000027;XM_032909806 XP_032765697 sodium channel subunit beta-2 protein-coding 625832125 LOC116908265 elongin-B-like 8 101588133 101590781 + 30032202 116908265 MODEL JAAIVD010000027;XM_032911515 XP_032767406 protein-coding 625832129 LOC116889620 igE-binding protein-like Y 1012637 1015150 + 22301074 116889620 MODEL JAAIVD010000015;XM_032890542 XP_032746433 protein-coding 625832134 Cnga1 cyclic nucleotide gated channel subunit alpha 1 ENCODES a protein that exhibits cAMP binding (ortholog); cGMP binding (ortholog); intracellularly cAMP-activated cation channel activity (ortholog); INVOLVED IN membrane depolarization (ortholog); regulation of cytosolic calcium ion concentration (ortholog); spermatogenesis (ortholog); PARTICIPATES IN altered visual phototransduction pathway; calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH retinitis pigmentosa (ortholog); retinitis pigmentosa 49 (ortholog); FOUND IN intracellular cyclic nucleotide activated cation channel complex (ortholog); membrane (ortholog); photoreceptor outer segment (ortholog) 11 29414558 29430401 - 30032202 116912467 MODEL JAAIVD010000006;XM_032916533 XP_032772424 cGMP-gated cation channel alpha-1 protein-coding 625832146 LOC116893266 probable 18S rRNA (guanine-N(7))-methyltransferase 2 143681821 143682841 - 116893266 MODEL JAAIVD010000001 pseudo 625832147 Rint1 RAD50 interactor 1 INVOLVED IN mitotic G2 DNA damage checkpoint signaling (ortholog); regulation of ER to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); hereditary breast ovarian cancer syndrome (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN Dsl1/NZR complex (ortholog); endoplasmic reticulum (ortholog) 6 153018781 153050450 + 22301074;30032202 116904193 MODEL JAAIVD010000024;XM_032907106 XP_032762997 RAD50-interacting protein 1 protein-coding 625832166 Serpinb10 serpin family B member 10 ENCODES a protein that exhibits peptidase inhibitor activity (ortholog); INVOLVED IN negative regulation of proteolysis (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 10 86160303 86177912 - 30032202 116911443 MODEL JAAIVD010000005;XM_032915411 XP_032771302 serpin B10 protein-coding 625832178 LOC116903465 protein-L-isoaspartate O-methyltransferase domain-containing protein 1-like 6 47055407 47057052 - 116903465 MODEL JAAIVD010000024;XM_032906017 XP_032761908 protein-coding 625832183 Dmgdh dimethylglycine dehydrogenase ENCODES a protein that exhibits dimethylglycine dehydrogenase activity (ortholog); flavin adenine dinucleotide binding (ortholog); folic acid binding (ortholog); INVOLVED IN choline catabolic process (ortholog); tetrahydrofolate interconversion (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; folate cycle metabolic pathway; ASSOCIATED WITH dimethylglycine dehydrogenase deficiency (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog) 3 202585920 202659552 - 22301074;30032202 116895686 MODEL JAAIVD010000012;XM_032896885 XP_032752776 dimethylglycine dehydrogenase, mitochondrial protein-coding 625832202 LOC116888364 protein PPP4R3C-like X 48958945 48961330 + 116888364 MODEL JAAIVD010000014 pseudo 625832203 LOC116901396 40S ribosomal protein S18-like 1 121724639 121725138 - 116901396 MODEL JAAIVD010000025 pseudo 625832204 Smim17 small integral membrane protein 17 2 179681947 179726301 - 116892737 MODEL JAAIVD010000001;XM_032894610;XM_032894611 XP_032750501;XP_032750502 protein-coding 625832216 Znf346 zinc finger protein 346 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); enzyme binding (ortholog); miRNA binding (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 14 73434501 73464036 + 22301074;30032202 116883430 MODEL JAAIVD010000009;XM_032884566 XP_032740457 protein-coding 625832227 Hmox1 heme oxygenase 1 ENCODES a protein that exhibits arachidonate omega-hydroxylase activity (ortholog); D-type glycerophospholipase activity (ortholog); enzyme binding (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to arsenic-containing substance (ortholog); cellular response to cadmium ion (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; heme degradation pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute chest syndrome (ortholog); acute kidney failure (ortholog); FOUND IN caveola (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 17 4482272 4489184 + 22301074;30032202 116886440 MODEL JAAIVD010000011;XM_032887929;XM_032887930;XM_032887931 XP_032743820;XP_032743821;XP_032743822 protein-coding 625832243 LOC116894097 olfactory receptor 52K1-like 2 103410883 103411836 - 22301074 116894097 MODEL JAAIVD010000001;XM_032895817 XP_032751708 protein-coding 625832246 C17H1orf198 chromosome 17 C1orf198 homolog FOUND IN cytosol (ortholog) 17 44155369 44181179 - 116886382 MODEL JAAIVD010000011;XM_032887849 XP_032743740 uncharacterized protein C1orf198 homolog protein-coding 625832254 Dusp16 dual specificity phosphatase 16 ENCODES a protein that exhibits JUN kinase binding (ortholog); mitogen-activated protein kinase binding (ortholog); mitogen-activated protein kinase p38 binding (ortholog); INVOLVED IN dephosphorylation (ortholog); negative regulation of MAPK cascade (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); transient cerebral ischemia (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 6 14651676 14730358 + 22301074;30032202 116903169 MODEL JAAIVD010000024;XM_032905539 XP_032761430 dual specificity protein phosphatase 16 protein-coding 625832265 LOC116907877 transcriptional activator ptaB-like 8 108987593 109160870 - 116907877 MODEL JAAIVD010000027;XM_032911063;XR_004388851 XP_032766954 protein-coding 625832274 LOC116903287 RNA-binding protein 12B-A-like 1 131424691 131432244 - 116903287 MODEL JAAIVD010000025;XR_004388269 pseudo 625832278 Zar1 zygote arrest 1 ENCODES a protein that exhibits molecular condensate scaffold activity (ortholog); mRNA 3'-UTR binding (ortholog); RNA sequestering activity (ortholog); INVOLVED IN membraneless organelle assembly (ortholog); mRNA stabilization (ortholog); negative regulation of translation (ortholog); FOUND IN cytoplasm (ortholog); ribonucleoprotein granule (ortholog) 11 29823757 29828114 + 30032202 116912725 MODEL JAAIVD010000006;XM_032916857 XP_032772748 zygote arrest protein 1 protein-coding 625832286 Mmp10 matrix metallopeptidase 10 INVOLVED IN regulation of cell migration (ortholog); ASSOCIATED WITH adrenoleukodystrophy (ortholog); asthma (ortholog); contact dermatitis (ortholog) 8 3740635 3748468 + 22301074;30032202 116907372 MODEL JAAIVD010000027;XM_032910324 XP_032766215 stromelysin-2 protein-coding 625832300 LOC116887819 glyceraldehyde-3-phosphate dehydrogenase-like X 32353684 32420304 - 116887819 MODEL JAAIVD010000014 pseudo 625832301 LOC116891346 heat shock cognate 71 kDa protein-like 2 61290267 61292485 - 116891346 MODEL JAAIVD010000001 pseudo 625832302 LOC116897108 serine hydrolase RBBP9-like 3 162751427 162751986 + 116897108 MODEL JAAIVD010000012 pseudo 625832303 Hmg20a high mobility group 20A ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of neuron differentiation (ortholog); negative regulation of protein sumoylation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH type 2 diabetes mellitus (ortholog); FOUND IN nucleus (ortholog) 8 50327351 50410664 + 30032202 116906764 MODEL JAAIVD010000027;XM_032909607 XP_032765498 high mobility group protein 20A protein-coding 625832317 LOC116893131 ATP-binding cassette sub-family A member 3-like 2 81393936 81484755 - 22301074;30032202 116893131 MODEL JAAIVD010000001;XM_032895062 XP_032750953 protein-coding 625832349 Inka1 inka box actin regulator 1 ENCODES a protein that exhibits protein kinase binding (ortholog); protein serine/threonine kinase inhibitor activity (ortholog); INVOLVED IN neural tube development (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 8 99315896 99317584 - 30032202 116907030 MODEL JAAIVD010000027;XM_032909972 XP_032765863 PAK4-inhibitor INKA1 protein-coding 625832355 LOC116900720 BPI fold-containing family A member 5 5 133500347 133506380 + 22301074;30032202 116900720 MODEL JAAIVD010000023;XM_032902427 XP_032758318 protein-coding 625832368 Taldo1 transaldolase 1 ENCODES a protein that exhibits carbohydrate binding (ortholog); identical protein binding (ortholog); monosaccharide binding (ortholog); INVOLVED IN fructose 6-phosphate metabolic process (ortholog); glyceraldehyde-3-phosphate metabolic process (ortholog); pentose-phosphate shunt (ortholog); PARTICIPATES IN pentose phosphate pathway; pentose phosphate pathway - non-oxidative phase; ribose 5-phosphate isomerase deficiency pathway; ASSOCIATED WITH carbohydrate metabolic disorder (ortholog); cataract (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 2 8080231 8090171 - 22301074;30032202 116890873 MODEL JAAIVD010000001;XM_032891454 XP_032747345 transaldolase protein-coding 625832380 LOC116911559 cysteine and glycine-rich protein 2-like 10 8635157 8635987 + 116911559 MODEL JAAIVD010000005 pseudo 625832381 LOC116904662 U7 small nuclear RNA 6 7746437 7746498 + 116904662 MODEL JAAIVD010000024;XR_004388362 snrna 625832384 Tmed3 transmembrane p24 trafficking protein 3 FOUND IN COPI vesicle coat (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) 8 81687612 81695335 + 30032202 116907583 MODEL JAAIVD010000027;XM_032910622 XP_032766513 transmembrane emp24 domain-containing protein 3 protein-coding 625832391 LOC116906988 probable threonine protease PRSS50 8 101439700 101446140 + 22301074;30032202 116906988 MODEL JAAIVD010000027;XM_032909914 XP_032765805 protein-coding 625832399 LOC116898421 heat shock 70 kDa protein 14-like 4 88771185 88778871 - 116898421 MODEL JAAIVD010000003 pseudo 625832400 Hdlbp high density lipoprotein binding protein ASSOCIATED WITH autistic disorder (ortholog); chromosome 2q37 deletion syndrome (ortholog); COVID-19 (ortholog); FOUND IN endoplasmic reticulum (ortholog); nuclear body (ortholog) 4 165340391 165410633 - 30032202 116899663 MODEL JAAIVD010000003;XM_032901675 XP_032757566 vigilin protein-coding 625832432 Prlh prolactin releasing hormone ENCODES a protein that exhibits neuropeptide hormone activity (ortholog); prolactin-releasing peptide receptor binding (ortholog); INVOLVED IN autonomic nervous system development (ortholog); eating behavior (ortholog); energy reserve metabolic process (ortholog); PARTICIPATES IN obesity pathway; ASSOCIATED WITH obesity (ortholog); FOUND IN cytoplasm (ortholog) 4 162958446 162959818 + 30032202 116898263 MODEL JAAIVD010000003;XM_032899617 XP_032755508 prolactin-releasing peptide protein-coding 625832438 Clgn calmegin ENCODES a protein that exhibits calcium ion binding (ortholog); protein folding chaperone (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); protein-containing complex assembly (ortholog); single fertilization (ortholog); ASSOCIATED WITH Dwarfism (ortholog); FOUND IN endoplasmic reticulum (ortholog); nuclear envelope (ortholog) 17 16819066 16853068 - 22301074;30032202 116886501 MODEL JAAIVD010000011;XM_032888004;XM_032888006;XM_032888007 XP_032743895;XP_032743897;XP_032743898 protein-coding 625832464 Hkdc1 hexokinase domain containing 1 ENCODES a protein that exhibits glucokinase activity (ortholog); INVOLVED IN glucose 6-phosphate metabolic process (ortholog); intracellular glucose homeostasis (ortholog); ASSOCIATED WITH Dwarfism (ortholog); Keratoconus 1 (ortholog); long QT syndrome (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); photoreceptor inner segment (ortholog) 18 28211986 28253452 - 22301074;30032202 116887298 MODEL JAAIVD010000013;XM_032888879 XP_032744770 hexokinase HKDC1 protein-coding 625832486 LOC116895003 small nucleolar RNA SNORA51 2 156739840 156739972 + 116895003 MODEL JAAIVD010000001;XR_004387191 snorna 625832489 Ubc ubiquitin C ASSOCIATED WITH COVID-19 (ortholog) 16 28520660 28525518 + 30032202 116885951 MODEL JAAIVD010000004;XM_032887270 XP_032743161 polyubiquitin-C protein-coding 625832495 LOC116900938 serine/arginine-rich splicing factor 3-like 5 86191643 86209961 + 116900938 MODEL JAAIVD010000023 pseudo 625832496 Spata6l spermatogenesis associated 6 like 2 28987470 29029236 - 30032202 116891067 MODEL JAAIVD010000001;XM_032891772 XP_032747663 spermatogenesis associated 6-like protein protein-coding 625832513 LOC116900724 60S ribosomal protein L12-like 5 134459483 134459990 - 22301074;30032202 116900724 MODEL JAAIVD010000023;XM_032902431 XP_032758322 protein-coding 625832517 LOC116907404 uncharacterized LOC116907404 8 101483477 101509655 + 116907404 MODEL JAAIVD010000027;XR_004388825 ncrna 625832522 Nfu1 NFU1 iron-sulfur cluster scaffold ENCODES a protein that exhibits 2 iron, 2 sulfur cluster binding (ortholog); 4 iron, 4 sulfur cluster binding (ortholog); iron ion binding (ortholog); INVOLVED IN iron-sulfur cluster assembly (ortholog); protein maturation (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; ASSOCIATED WITH genetic disease (ortholog); hereditary spastic paraplegia 93 (ortholog); multiple mitochondrial dysfunctions syndrome (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleus (ortholog) 6 59284281 59305027 - 22301074;30032202 116903542 MODEL JAAIVD010000024;XM_032906156 XP_032762047 NFU1 iron-sulfur cluster scaffold homolog, mitochondrial protein-coding 625832534 LOC116902554 U1 spliceosomal RNA 5 96208856 96209017 - 116902554 MODEL JAAIVD010000023;XR_004388153 snrna 625832537 LOC116892994 heat shock protein HSP 90-alpha-like 2 219029839 219031722 - 116892994 MODEL JAAIVD010000001 pseudo 625832538 LOC116907426 zinc finger protein 136-like 1 157283038 157285975 - 116907426 MODEL JAAIVD010000025 pseudo 625832539 Shank2 SH3 and multiple ankyrin repeat domains 2 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); SH3 domain binding (ortholog); structural constituent of postsynaptic density (ortholog); INVOLVED IN adult behavior (ortholog); adult locomotory behavior (ortholog); associative learning (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); bipolar disorder (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); ciliary membrane (ortholog) 2 5298441 5687447 - 30032202 116890824 MODEL JAAIVD010000001;XM_032891331;XM_032891332;XM_032891333 XP_032747222;XP_032747223;XP_032747224 SH3 and multiple ankyrin repeat domains protein 2 protein-coding 625832576 Akap3 A-kinase anchoring protein 3 ENCODES a protein that exhibits protein kinase A binding (ortholog); INVOLVED IN blastocyst hatching (ortholog); cell surface receptor protein serine/threonine kinase signaling pathway (ortholog); establishment of protein localization (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH spermatogenic failure 82 (ortholog); FOUND IN acrosomal vesicle (ortholog); motile cilium (ortholog); sperm fibrous sheath (ortholog) 6 21023966 21049437 - 30032202 116904584 MODEL JAAIVD010000024;XM_032907379;XM_032907380 XP_032763270;XP_032763271 A-kinase anchor protein 3 protein-coding 625832589 LOC116903363 adenosylhomocysteinase-like 6 30186952 30189274 - 116903363 MODEL JAAIVD010000024;XR_004388274 pseudo 625832593 LOC116895241 interferon-induced protein 44-like 3 25064216 25111724 - 116895241 MODEL JAAIVD010000012;XM_032896562 XP_032752453 protein-coding 625832602 LOC116890481 small nucleolar RNA SNORA55 1 34967702 34967834 - 116890481 MODEL JAAIVD010000025;XR_004386669 snorna 625832605 Tfap2c transcription factor AP-2 gamma ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cell differentiation (ortholog); cerebral cortex development (ortholog); dichotomous subdivision of terminal units involved in mammary gland duct morphogenesis (ortholog); ASSOCIATED WITH microcephaly (ortholog); Stomach Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 5 145443363 145451099 - 22301074;30032202 116900753 MODEL JAAIVD010000023;XM_032902462;XM_032902463 XP_032758353;XP_032758354 protein-coding 625832618 LOC116904239 uncharacterized LOC116904239 6 157245773 157249082 + 116904239 MODEL JAAIVD010000024;XR_004388337;XR_004388338 ncrna 625832625 Ntrk1 neurotrophic receptor tyrosine kinase 1 ENCODES a protein that exhibits GPI-linked ephrin receptor activity (ortholog); identical protein binding (ortholog); kinase binding (ortholog); INVOLVED IN axon guidance (ortholog); axonogenesis involved in innervation (ortholog); B cell differentiation (ortholog); ASSOCIATED WITH Alcohol-Related Disorders (ortholog); Alcoholic Intoxication (ortholog); Alzheimer's disease (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); cytoplasm (ortholog) 3 65766019 65782780 + 22301074;30032202 116896715 MODEL JAAIVD010000012;XM_032898134 XP_032754025 high affinity nerve growth factor receptor protein-coding 625832645 LOC116902700 cationic trypsin-3 6 41838377 41842272 - 22301074;30032202 116902700 MODEL JAAIVD010000024;XM_032905055 XP_032760946 protein-coding 625832654 Fgf14 fibroblast growth factor 14 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); growth factor activity (ortholog); heparin binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); chemical synaptic transmission (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH autosomal dominant cerebellar ataxia (ortholog); cartilage disease (ortholog); cerebellar ataxia (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) 12 430364 1015169 + 22301074;30032202 116913434 MODEL JAAIVD010000007;XM_032917630;XM_032917631;XM_032917632;XM_032917633 XP_032773521;XP_032773522;XP_032773523;XP_032773524 protein-coding 625832672 LOC116904155 protein piccolo-like 6 145292208 145336870 + 30032202 116904155 MODEL JAAIVD010000024;XM_032907053 XP_032762944 protein-coding 625832685 Gpc3 glypican 3 ENCODES a protein that exhibits peptidyl-dipeptidase inhibitor activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); anterior/posterior axis specification (ortholog); body morphogenesis (ortholog); PARTICIPATES IN glypican signaling pathway; Hedgehog signaling pathway; ASSOCIATED WITH Arterial Occlusive Diseases (ortholog); atypical teratoid rhabdoid tumor (ortholog); Coronary Vessel Anomalies (ortholog); FOUND IN lysosome (ortholog); plasma membrane (ortholog) X 115450239 115803102 + 22301074;30032202 116889173 MODEL JAAIVD010000014;XM_032890339 XP_032746230 glypican-3 protein-coding 625832698 LOC116911992 PRAME family member 8-like 11 48582902 48585572 - 22301074;30032202 116911992 MODEL JAAIVD010000006;XM_032915897 XP_032771788 protein-coding 625832703 LOC116899944 U2 spliceosomal RNA 4 110022781 110022942 - 116899944 MODEL JAAIVD010000003 pseudo 625832704 LOC116883710 keratin, type II cuticular Hb5 1 261558788 261565421 + 22301074;30032202 116883710 MODEL JAAIVD010000025;XM_032884928;XM_032884935 XP_032740819;XP_032740826 protein-coding 625832717 Vgll2 vestigial like family member 2 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); skeletal muscle tissue development (ortholog); ASSOCIATED WITH epilepsy (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 18 28868931 28874960 - 22301074;30032202 116887526 MODEL JAAIVD010000013;XM_032889153;XM_032889154;XM_032889155 XP_032745044;XP_032745045;XP_032745046 transcription cofactor vestigial-like protein 2 protein-coding 625832730 Ints8 integrator complex subunit 8 INVOLVED IN protein localization to chromatin (ortholog); regulation of transcription elongation by RNA polymerase II (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); NEURODEVELOPMENTAL DISORDER WITH CEREBELLAR HYPOPLASIA AND SPASTICITY (ortholog); prostate cancer (ortholog); FOUND IN chromatin (ortholog); INTAC complex (ortholog); integrator complex (ortholog) 1 132459931 132506495 + 30032202 116903415 MODEL JAAIVD010000025;XM_032905941 XP_032761832 protein-coding 625832761 LOC116893845 guanylate cyclase 2G-like 2 60922203 60963600 + 22301074;30032202 116893845 MODEL JAAIVD010000001;XM_032895564 XP_032751455 protein-coding 625832785 Iqank1 IQ motif and ankyrin repeat containing 1 1 248337698 248364501 + 22301074;30032202 116889959 MODEL JAAIVD010000025;XM_032890762 XP_032746653 putative IQ motif and ankyrin repeat domain-containing protein LOC642574 homolog protein-coding 625832800 Daxx death domain associated protein ENCODES a protein that exhibits ATP-dependent H3-H4 histone complex chaperone activity (ortholog); enzyme binding (ortholog); histone binding (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); apoptotic signaling pathway (ortholog); cell population proliferation (ortholog); PARTICIPATES IN aldosterone signaling pathway; histone modification pathway; p53 signaling pathway; ASSOCIATED WITH adrenocortical carcinoma (ortholog); appendiceal neoplasm (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN cell body (ortholog); cell cortex (ortholog); chromosome, centromeric region (ortholog) 18 6918531 6924249 + 22301074 116887575 MODEL JAAIVD010000013;XM_032889195;XM_032889196;XM_032889197;XM_032889198 XP_032745086;XP_032745087;XP_032745088;XP_032745089 death domain-associated protein 6 protein-coding 625832821 LOC116905608 zinc finger protein 844-like 7 13544919 13545599 - 116905608 MODEL JAAIVD010000026 pseudo 625832822 Ccdc150 coiled-coil domain containing 150 4 128953485 129014570 + 116898505 MODEL JAAIVD010000003;XM_032899737 XP_032755628 coiled-coil domain-containing protein 150 protein-coding 625832842 Trnaq-cug transfer RNA glutamine (anticodon CUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41778371 41778442 + 116884216 MODEL JAAIVD010000009 trna 625832843 Crtam cytotoxic and regulatory T cell molecule ENCODES a protein that exhibits identical protein binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN activated T cell proliferation (ortholog); cell recognition (ortholog); detection of stimulus (ortholog); FOUND IN immunological synapse (ortholog); plasma membrane (ortholog) 8 35559604 35572582 - 30032202 116906737 MODEL JAAIVD010000027;XM_032909559 XP_032765450 cytotoxic and regulatory T-cell molecule protein-coding 625832852 Lrch3 leucine rich repeats and calponin homology domain containing 3 INVOLVED IN septin cytoskeleton organization (ortholog); FOUND IN cytosol (ortholog) 4 17716450 17819172 + 22301074 116898786 MODEL JAAIVD010000003;XM_032900123;XM_032900124;XM_032900125;XM_032900126 XP_032756014;XP_032756015;XP_032756016;XP_032756017 DISP complex protein LRCH3 protein-coding 625832882 LOC116911434 ribose-phosphate pyrophosphokinase 1-like 10 83952825 83953616 + 116911434 MODEL JAAIVD010000005 pseudo 625832883 Trap1 TNF receptor associated protein 1 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN negative regulation of cellular respiration (ortholog); negative regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide (ortholog); translational attenuation (ortholog); ASSOCIATED WITH Disease Progression (ortholog); osteoarthritis (ortholog); Stomach Neoplasms (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrial matrix (ortholog) 9 17783008 17816525 + 22301074;30032202 116908830 MODEL JAAIVD010000002;XM_032912249 XP_032768140 heat shock protein 75 kDa, mitochondrial protein-coding 625832905 R3hcc1l R3H domain and coiled-coil containing 1 like FOUND IN exon-exon junction complex (ortholog) 2 41619747 41696210 + 116891181 MODEL JAAIVD010000001;XM_032891998 XP_032747889 coiled-coil domain-containing protein R3HCC1L protein-coding 625832916 LOC116911046 uncharacterized LOC116911046 10 61570970 61572351 - 116911046 MODEL JAAIVD010000005;XR_004389307 ncrna 625832920 LOC116898393 UPF0711 protein C18orf21 homolog 4 76337121 76337716 - 116898393 MODEL JAAIVD010000003 pseudo 625832921 Tc2n tandem C2 domains, nuclear FOUND IN nucleus (ortholog) 7 120108626 120161081 - 30032202 116905411 MODEL JAAIVD010000026;XM_032908371 XP_032764262 tandem C2 domains nuclear protein protein-coding 625832935 LOC116895002 small nucleolar RNA SNORA51 2 27869822 27869954 - 116895002 MODEL JAAIVD010000001;XR_004387190 snorna 625832938 LOC116889019 heterogeneous nuclear ribonucleoprotein A3-like X 16907761 16908787 - 116889019 MODEL JAAIVD010000014 pseudo 625832939 Raph1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 INVOLVED IN axon extension (ortholog); ASSOCIATED WITH COVID-19 (ortholog); major depressive disorder (ortholog); prostate cancer (ortholog); FOUND IN cell leading edge (ortholog); plasma membrane (ortholog) 4 134602830 134676935 - 22301074;30032202 116899438 MODEL JAAIVD010000003;XM_032901195 XP_032757086 ras-associated and pleckstrin homology domains-containing protein 1 protein-coding 625832957 LOC116902481 U6 spliceosomal RNA 5 11972786 11972890 - 116902481 MODEL JAAIVD010000023;XR_004388097 snrna 625832960 L1cam L1 cell adhesion molecule ENCODES a protein that exhibits identical protein binding (ortholog); integrin binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN axon development (ortholog); axon guidance (ortholog); axonal fasciculation (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); anxiety disorder (ortholog); aphasia (ortholog); FOUND IN axon (ortholog); axonal growth cone (ortholog); cell surface (ortholog) X 128699020 128724589 + 22301074;30032202 116888465 MODEL JAAIVD010000014;XM_032889745 XP_032745636 neural cell adhesion molecule L1 protein-coding 625832993 Lamc2 laminin subunit gamma 2 ENCODES a protein that exhibits heparin binding (ortholog); INVOLVED IN positive regulation of cell migration (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); Disease Progression (ortholog); genetic disease (ortholog); FOUND IN basement membrane (ortholog); cell cortex (ortholog); extracellular region (ortholog) 10 32601822 32663367 - 30032202 116911151 MODEL JAAIVD010000005;XM_032915006 XP_032770897 laminin subunit gamma-2 protein-coding 625833020 LOC116886916 RING-box protein 2-like 1 29150070 29150405 + 116886916 MODEL JAAIVD010000025 pseudo 625833021 Syngap1 synaptic Ras GTPase activating protein 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); protein kinase binding (ortholog); INVOLVED IN dendrite development (ortholog); maintenance of postsynaptic specialization structure (ortholog); modulation of chemical synaptic transmission (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); autosomal dominant intellectual developmental disorder 5 (ortholog); autosomal recessive intellectual developmental disorder 5 (ortholog); FOUND IN dendritic shaft (ortholog); glutamatergic synapse (ortholog); membrane (ortholog) 18 6832918 6862986 - 22301074 116887650 MODEL JAAIVD010000013;XM_032889237;XM_032889238;XM_032889239;XM_032889241;XM_032889242;XM_032889243;XM_032889244;XM_032889245;XM_032889246;XM_032889247;XM_032889248;XM_032889249;XM_032889250;XR_004386226 XP_032745128;XP_032745129;XP_032745130;XP_032745132;XP_032745133;XP_032745134;XP_032745135;XP_032745136;XP_032745137;XP_032745138;XP_032745139;XP_032745140;XP_032745141 ras/Rap GTPase-activating protein SynGAP protein-coding 625833080 Nol9 nucleolar protein 9 ENCODES a protein that exhibits ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity (ortholog); INVOLVED IN maturation of 5.8S rRNA (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) 1 8682162 8700456 - 30032202 116892358 MODEL JAAIVD010000025;XM_032894016;XM_032894024 XP_032749907;XP_032749915 polynucleotide 5'-hydroxyl-kinase NOL9 protein-coding 625833098 LOC116900613 solute carrier organic anion transporter family member 6A1-like 5 104763948 104834476 - 22301074;30032202 116900613 MODEL JAAIVD010000023;XM_032902332 XP_032758223 protein-coding 625833113 Nudt18 nudix hydrolase 18 ENCODES a protein that exhibits 8-hydroxy-dADP phosphatase activity (ortholog); 8-oxo-dGDP phosphatase activity (ortholog); 8-oxo-GDP phosphatase activity (ortholog); INVOLVED IN dADP catabolic process (ortholog); dGDP catabolic process (ortholog); GDP catabolic process (ortholog); FOUND IN Golgi apparatus (ortholog); nucleoplasm (ortholog) 12 53774413 53777204 - 30032202 116913718 MODEL JAAIVD010000007;XM_032918018 XP_032773909 8-oxo-dGDP phosphatase NUDT18 protein-coding 625833120 Actrt2 actin related protein T2 ASSOCIATED WITH Keloid (ortholog) 1 6043937 6045348 + 116886069 MODEL JAAIVD010000025;XM_032887386 XP_032743277 actin-related protein T2 protein-coding 625833125 Slc25a19 solute carrier family 25 member 19 ENCODES a protein that exhibits deoxynucleotide transmembrane transporter activity (ortholog); thiamine pyrophosphate transmembrane transporter activity (ortholog); INVOLVED IN deoxynucleotide transport (ortholog); thiamine diphosphate biosynthetic process (ortholog); thiamine pyrophosphate transmembrane transport (ortholog); ASSOCIATED WITH Amish Lethal Microcephaly (ortholog); genetic disease (ortholog); microcephaly (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 9 68477706 68488376 + 30032202 116910592 MODEL JAAIVD010000002;XM_032914516;XM_032914517 XP_032770407;XP_032770408 mitochondrial thiamine pyrophosphate carrier protein-coding 625833141 LOC116884076 small nucleolar RNA SNORA17 14 71350084 71350213 + 116884076 MODEL JAAIVD010000009;XR_004385822 snorna 625833144 LOC116903016 glycerol-3-phosphate dehydrogenase 1-like protein 6 153845358 153848632 + 22301074;30032202 116903016 MODEL JAAIVD010000024;XM_032905328;XM_032905329 XP_032761219;XP_032761220 protein-coding 625833154 LOC116899332 uncharacterized LOC116899332 4 118465707 118470101 + 116899332 MODEL JAAIVD010000003;XR_004387706 ncrna 625833158 Actl7a actin like 7A INVOLVED IN acrosome assembly (ortholog); fertilization (ortholog); spermatid development (ortholog); ASSOCIATED WITH bladder urothelial carcinoma (ortholog); male infertility (ortholog); spermatogenic failure 86 (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); Golgi apparatus (ortholog) 1 94867749 94869222 - 30032202 116888546 MODEL JAAIVD010000025;XM_032889858 XP_032745749 actin-like protein 7A protein-coding 625833163 Psmd1 proteasome 26S subunit, non-ATPase 1 ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN regulation of AMPA receptor activity (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog); synaptic vesicle (ortholog) 4 158202948 158276762 + 22301074;30032202 116898566 MODEL JAAIVD010000003;XM_032899772 XP_032755663 26S proteasome non-ATPase regulatory subunit 1 protein-coding 625833191 Cenpk centromere protein K INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH castration-resistant prostate carcinoma (ortholog); FOUND IN nucleus (ortholog) 3 193109785 193132464 - 22301074;30032202 116897227 MODEL JAAIVD010000012;XM_032898946 XP_032754837 protein-coding 625833204 Ppp3ca protein phosphatase 3 catalytic subunit alpha ENCODES a protein that exhibits ATPase binding (ortholog); calcium-dependent protein serine/threonine phosphatase activity (ortholog); calmodulin binding (ortholog); INVOLVED IN calcineurin-mediated signaling (ortholog); calcineurin-NFAT signaling cascade (ortholog); calcium ion transport (ortholog); PARTICIPATES IN calcineurin signaling pathway; dopamine signaling pathway; interleukin-12 signaling pathway; ASSOCIATED WITH Arthrogryposis, Cleft Palate, Craniosynostosis, and Impaired Intellectual Development (ortholog); autism spectrum disorder (ortholog); Brain Injuries (ortholog); FOUND IN calcineurin complex (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) 3 22179424 22452893 - 30032202 116896218 MODEL JAAIVD010000012;XM_032897274 XP_032753165 serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform protein-coding 625833222 LOC116910632 U6 spliceosomal RNA 9 83104331 83104434 + 116910632 MODEL JAAIVD010000002;XR_004389171 snrna 625833225 LOC116894080 olfactory receptor 52E2-like 2 103122820 103123754 + 116894080 MODEL JAAIVD010000001 pseudo 625833226 Ier5l immediate early response 5 like 5 5158869 5161519 + 116901178 MODEL JAAIVD010000023;XM_032902846 XP_032758737 immediate early response gene 5-like protein protein-coding 625833231 LOC116909295 collagen alpha-1(I) chain-like 9 17656228 17657081 - 116909295 MODEL JAAIVD010000002;XM_032912834 XP_032768725 protein-coding 625833235 LOC116903452 low molecular weight phosphotyrosine protein phosphatase-like 6 42463767 42464269 - 22301074 116903452 MODEL JAAIVD010000024;XM_032906005 XP_032761896 protein-coding 625833239 LOC116907865 ATP synthase F(0) complex subunit C1, mitochondrial-like 8 27969511 27969971 + 116907865 MODEL JAAIVD010000027 pseudo 625833240 LOC116899757 U6 spliceosomal RNA 4 120710253 120710356 - 116899757 MODEL JAAIVD010000003;XR_004387772 snrna 625833243 Sipa1 signal-induced proliferation-associated 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN cellular response to water deprivation (ortholog); regulation of cell cycle (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; vasopressin signaling pathway; vasopressin signaling pathway via receptor type 2; ASSOCIATED WITH chronic myeloid leukemia (ortholog); esophageal atresia (ortholog); melanoma (ortholog); FOUND IN protein-containing complex (ortholog) 2 2030540 2042579 + 22301074;30032202 116890701 MODEL JAAIVD010000001;XM_032891129;XM_032891131 XP_032747020;XP_032747022 signal-induced proliferation-associated protein 1 protein-coding 625833267 LOC116894342 orphan sodium- and chloride-dependent neurotransmitter transporter NTT5-like 2 154257757 154269294 - 22301074;30032202 116894342 MODEL JAAIVD010000001;XM_032896039;XM_032896040 XP_032751930;XP_032751931 sodium-dependent neutral amino acid transporter B(0)AT2-like protein-coding 625833289 LOC116889480 small nucleolar RNA SNORA2/SNORA34 family X 80547252 80547387 - 116889480 MODEL JAAIVD010000014;XR_004386431 snorna 625833292 LOC116895945 serine/arginine-rich splicing factor 10-like 3 135484160 135489486 - 116895945 MODEL JAAIVD010000012 pseudo 625833293 Anapc5 anaphase promoting complex subunit 5 ENCODES a protein that exhibits protein phosphatase binding (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); FOUND IN anaphase-promoting complex (ortholog); nucleus (ortholog); spindle (ortholog) 16 31003350 31036403 + 22301074;30032202 116885235 MODEL JAAIVD010000004;XM_032886473;XM_032886474 XP_032742364;XP_032742365 anaphase-promoting complex subunit 5 protein-coding 625833320 LOC116910427 uncharacterized LOC116910427 9 1004804 1007240 - 116910427 MODEL JAAIVD010000002;XR_004389150 ncrna 625833329 Irf2bp1 interferon regulatory factor 2 binding protein 1 ENCODES a protein that exhibits transcription corepressor activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); protein polyubiquitination (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 2 171615252 171617810 - 30032202 116892557 MODEL JAAIVD010000001;XM_032894336 XP_032750227 interferon regulatory factor 2-binding protein 1 protein-coding 625833334 Cimip7 ciliary microtubule inner protein 7 8 99765556 99775537 + 116907590 MODEL JAAIVD010000027;XM_032910630 XP_032766521 C8H3orf84 chromosome 8 C3orf84 homolog;uncharacterized protein C3orf84 homolog protein-coding 625833341 LOC116915087 uncharacterized LOC116915087 13 63419704 63421035 + 116915087 MODEL JAAIVD010000008;XR_004389795 ncrna 625833345 LOC116911541 ubiquitin-like 10 75997341 75997723 - 30032202 116911541 MODEL JAAIVD010000005;XM_032915529 XP_032771420 protein-coding 625833350 Plaat1 phospholipase A and acyltransferase 1 ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); glycerophospholipase activity (ortholog); glycerophospholipid phospholipase A1 activity (ortholog); INVOLVED IN ether lipid metabolic process (ortholog); N-acylphosphatidylethanolamine metabolic process (ortholog); peroxisome organization (ortholog); FOUND IN cytoplasm (ortholog); nuclear envelope lumen (ortholog); nucleus (ortholog) 4 14129180 14147323 + 30032202 116898740 MODEL JAAIVD010000003;XM_032900052 XP_032755943 protein-coding 625833358 Cfap53 cilia and flagella associated protein 53 INVOLVED IN cerebrospinal fluid circulation (ortholog); cilium assembly (ortholog); determination of left/right symmetry (ortholog); ASSOCIATED WITH dextrocardia (ortholog); genetic disease (ortholog); hypoplastic left heart syndrome (ortholog); FOUND IN 9+0 motile cilium (ortholog); 9+2 motile cilium (ortholog); axonemal A tubule inner sheath (ortholog) 15 57600995 57666412 - 116884303 MODEL JAAIVD010000010;XM_032885413 XP_032741304 cilia- and flagella-associated protein 53 protein-coding 625833370 Rhce Rh blood group CcEe antigens ASSOCIATED WITH congenital hemolytic anemia (ortholog); megacolon (ortholog); Rh-Null Disease, Amorph Type (ortholog); FOUND IN ankyrin-1 complex (ortholog) 1 23346891 23380665 - 22301074;30032202 116894623 MODEL JAAIVD010000025;XM_032896343;XM_032896349 XP_032752234;XP_032752240 blood group Rh(CE) polypeptide protein-coding 625833387 Yif1b Yip1 interacting factor homolog B, membrane trafficking protein INVOLVED IN cilium assembly (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); protein targeting to membrane (ortholog); ASSOCIATED WITH genetic disease (ortholog); Kaya-Barakat-Masson Syndrome (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog) 2 166698221 166708400 - 22301074;30032202 116892356 MODEL JAAIVD010000001;XM_032894010;XM_032894011;XM_032894012 XP_032749901;XP_032749902;XP_032749903 protein YIF1B protein-coding 625833405 LOC116902981 60S ribosomal protein L21-like 6 15853103 15854094 - 116902981 MODEL JAAIVD010000024 pseudo 625833406 Trnas-gcu transfer RNA serine (anticodon GCU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 72019579 72019660 + 116904839 MODEL JAAIVD010000024 trna 625833407 Snrnp25 small nuclear ribonucleoprotein U11/U12 subunit 25 FOUND IN nucleoplasm (ortholog); nucleus (ortholog); U12-type spliceosomal complex (ortholog) 9 3675131 3678437 - 30032202 116908882 MODEL JAAIVD010000002;XM_032912327 XP_032768218 U11/U12 small nuclear ribonucleoprotein 25 kDa protein protein-coding 625833416 LOC116886234 acylcarnitine hydrolase-like 17 24813314 24818916 + 116886234 MODEL JAAIVD010000011 pseudo 625833417 LOC116885541 uncharacterized LOC116885541 16 41758075 41759227 + 116885541 MODEL JAAIVD010000004;XR_004386020;XR_004386021 ncrna 625833424 LOC116883878 prolactin-5A1-like 14 47199106 47206391 + 22301074;30032202 116883878 MODEL JAAIVD010000009;XM_032885144 XP_032741035 protein-coding 625833432 Lpxn leupaxin ENCODES a protein that exhibits transcription coregulator activity (ortholog); INVOLVED IN negative regulation of B cell receptor signaling pathway (ortholog); negative regulation of cell adhesion (ortholog); regulation of cell adhesion mediated by integrin (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); focal adhesion (ortholog) 2 12843384 12874573 + 30032202 116890997 MODEL JAAIVD010000001;XM_032891675 XP_032747566 protein-coding 625833445 Gigyf2 GRB10 interacting GYF protein 2 ENCODES a protein that exhibits molecular adaptor activity (ortholog); proline-rich region binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); feeding behavior (ortholog); homeostasis of number of cells within a tissue (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); Parkinson's Disease 11 (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) 4 159456826 159582260 + 22301074;30032202 116899604 MODEL JAAIVD010000003;XM_032901556;XM_032901557;XM_032901558;XM_032901560 XP_032757447;XP_032757448;XP_032757449;XP_032757451 GRB10-interacting GYF protein 2 protein-coding 625833489 Rhof ras homolog family member F, filopodia associated INVOLVED IN actin filament organization (ortholog) 16 30689504 30703790 + 22301074;30032202 116885316 MODEL JAAIVD010000004;XM_032886577 XP_032742468 rho-related GTP-binding protein RhoF protein-coding 625833498 LOC116910619 olfactory receptor 1A1-like 9 92999170 93000108 + 22301074;30032202 116910619 MODEL JAAIVD010000002;XM_032914568 XP_032770459 protein-coding 625833501 Nagk N-acetylglucosamine kinase ENCODES a protein that exhibits muramyl dipeptide kinase activity (ortholog); N-acetylglucosamine kinase activity (ortholog); N-acylmannosamine kinase activity (ortholog); INVOLVED IN defense response to bacterium (ortholog); N-acetylglucosamine catabolic process (ortholog); N-acetylglucosamine metabolic process (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; amino sugar metabolic pathway; french type sialuria pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Neoplasm Metastasis (ortholog); Prostatic Neoplasms (ortholog) 6 62443880 62451496 - 30032202 116903596 MODEL JAAIVD010000024;XM_032906236;XM_032906237 XP_032762127;XP_032762128 N-acetyl-D-glucosamine kinase protein-coding 625833520 Fam220a family with sequence similarity 220 member A ENCODES a protein that exhibits STAT family protein binding (ortholog); INVOLVED IN intracellular signal transduction (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); protein dephosphorylation (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); nucleus (ortholog) 16 9571243 9600721 - 30032202 116885563 MODEL JAAIVD010000004;XM_032886856 XP_032742747 protein FAM220A protein-coding 625833526 Unc80 unc-80 subunit of NALCN channel complex INVOLVED IN regulation of neuronal action potential (ortholog); sodium ion transmembrane transport (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); brain disease (ortholog); Developmental Disabilities (ortholog); FOUND IN plasma membrane (ortholog); sodium channel complex (ortholog) 4 140170953 140352994 - 30032202 116899470 MODEL JAAIVD010000003;XM_032901292 XP_032757183 protein unc-80 homolog;unc-80 homolog, NALCN channel complex subunit protein-coding 625833595 Tspan5 tetraspanin 5 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN positive regulation of Notch signaling pathway (ortholog); protein localization to plasma membrane (ortholog); protein maturation (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN nucleoplasm (ortholog); plasma membrane (ortholog) 3 20245414 20405451 - 22301074;30032202 116896205 MODEL JAAIVD010000012;XM_032897253 XP_032753144 tetraspanin-5 protein-coding 625833607 Ofd1 OFD1 centriole and centriolar satellite protein ENCODES a protein that exhibits alpha-tubulin binding (ortholog); gamma-tubulin binding (ortholog); identical protein binding (ortholog); INVOLVED IN axoneme assembly (ortholog); centriole replication (ortholog); cilium assembly (ortholog); ASSOCIATED WITH CAKUT (ortholog); ciliopathy (ortholog); COACH syndrome (ortholog); FOUND IN centriolar satellite (ortholog); centriole (ortholog); centrosome (ortholog) X 30514276 30556212 - 22301074;30032202 116889270 MODEL JAAIVD010000014;XM_032890413 XP_032746304 oral-facial-digital syndrome 1 protein protein-coding 625833635 LOC116904543 acidic proline-rich protein PRP33-like 6 16035086 16038275 - 30032202 116904543 MODEL JAAIVD010000024;XM_032907336 XP_032763227 protein-coding 625833641 LOC116888091 60S ribosomal protein L24-like X 94132879 94133330 + 116888091 MODEL JAAIVD010000014 pseudo 625833642 Acot7 acyl-CoA thioesterase 7 ENCODES a protein that exhibits fatty acyl-CoA hydrolase activity (ortholog); fatty-acyl-CoA binding (ortholog); identical protein binding (ortholog); INVOLVED IN coenzyme A biosynthetic process (ortholog); fatty acid catabolic process (ortholog); long-chain fatty-acyl-CoA catabolic process (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 8471544 8562634 - 30032202 116892305 MODEL JAAIVD010000025;XM_032893927;XM_032893935;XM_032893943 XP_032749818;XP_032749826;XP_032749834 cytosolic acyl coenzyme A thioester hydrolase protein-coding 625833661 Sf3a2 splicing factor 3a subunit 2 INVOLVED IN mRNA processing (ortholog); mRNA splicing, via spliceosome (ortholog); positive regulation of neuron projection development (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) 1 154080548 154086989 - 22301074;30032202 116904838 MODEL JAAIVD010000025;XM_032907451;XM_032907452 XP_032763342;XP_032763343 protein-coding 625833677 Gng14 G protein subunit gamma 14 17 15224824 15225428 + 22301074;30032202 116886419 MODEL JAAIVD010000011;XM_032887902 XP_032743793 putative guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-14 protein-coding 625833683 LOC116905259 acyl-coenzyme A thioesterase 3 7 98137181 98142580 + 22301074;30032202 116905259 MODEL JAAIVD010000026;XM_032908112;XM_032908113 XP_032764003;XP_032764004 protein-coding 625833692 Klhl23 kelch like family member 23 5 47119369 47130281 + 22301074 116901488 MODEL JAAIVD010000023;XM_032903451 XP_032759342 kelch-like protein 23 protein-coding 625833701 LOC116893312 mas-related G-protein coupled receptor member B4-like 2 152104453 152106541 + 116893312 MODEL JAAIVD010000001 pseudo 625833702 LOC116898012 protein SET-like 4 71862729 71863703 - 22301074;30032202 116898012 MODEL JAAIVD010000003;XM_032899405 XP_032755296 protein-coding 625833707 LOC116895506 GTP-binding nuclear protein Ran-like 3 108767890 108769620 - 116895506 MODEL JAAIVD010000012 pseudo 625833708 LOC116889983 uncharacterized LOC116889983 1 172837359 172839208 - 116889983 MODEL JAAIVD010000025;XR_004386520 ncrna 625833712 Spx spexin hormone ENCODES a protein that exhibits neuropeptide hormone activity (ortholog); type 2 galanin receptor binding (ortholog); type 3 galanin receptor binding (ortholog); INVOLVED IN long-chain fatty acid import into cell (ortholog); negative regulation of appetite (ortholog); negative regulation of heart rate (ortholog); FOUND IN cytoplasm (ortholog); dense core granule (ortholog); extracellular region (ortholog) 6 163370 169370 + 22301074;30032202 116903066 MODEL JAAIVD010000024;XM_032905366 XP_032761257 spexin protein-coding 625833722 Ltc4s leukotriene C4 synthase ENCODES a protein that exhibits glutathione binding (ortholog); identical protein binding (ortholog); leukotriene-C4 synthase activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to vitamin A (ortholog); leukotriene biosynthetic process (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); acute promyelocytic leukemia (ortholog); allergic asthma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); nuclear envelope (ortholog) 9 32900641 32902690 - 22301074;30032202 116909293 MODEL JAAIVD010000002;XM_032912831;XM_032912832 XP_032768722;XP_032768723 protein-coding 625833734 LOC116889302 melanoma-associated antigen B18-like X 129681891 129684147 - 30032202 116889302 MODEL JAAIVD010000014;XM_032890426 XP_032746317 protein-coding 625833740 Kcng2 potassium voltage-gated channel modifier subfamily G member 2 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); INVOLVED IN regulation of potassium ion transport (ortholog) 15 51870090 51936455 + 22301074;30032202 116884790 MODEL AJ011020;JAAIVD010000010;XM_032886023;XM_032886024 CAB56852;XP_032741914;XP_032741915 Kv6.2 cardiac potassium channel subunit (Kv6.2);potassium voltage-gated channel subfamily G member 2 protein-coding 625833750 Mcm3 minichromosome maintenance complex component 3 INVOLVED IN DNA replication (ortholog); ASSOCIATED WITH Meier-Gorlin syndrome (ortholog); FOUND IN cytoplasm (ortholog); MCM complex (ortholog); nucleolus (ortholog) 4 98172509 98190605 - 22301074;30032202 116899242 MODEL JAAIVD010000003;XM_032900846 XP_032756737 DNA replication licensing factor MCM3 protein-coding 625833771 Srgap2 SLIT-ROBO Rho GTPase activating protein 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN actin filament severing (ortholog); dendritic spine development (ortholog); excitatory synapse assembly (ortholog); ASSOCIATED WITH intellectual disability (ortholog); myoclonic-atonic epilepsy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendritic spine (ortholog) 10 4300992 4521966 + 22301074;30032202 116910992 MODEL JAAIVD010000005;XM_032914706;XM_032914707 XP_032770597;XP_032770598 SLIT-ROBO Rho GTPase-activating protein 2 protein-coding 625833804 LOC116912105 zinc finger protein DZIP1-like 11 1112363 1114422 - 30032202 116912105 MODEL JAAIVD010000006;XM_032916003 XP_032771894 protein-coding 625833809 Dnaaf9 dynein axonemal assembly factor 9 5 110444437 110576561 - 116901978 MODEL JAAIVD010000023;XM_032904223 XP_032760114 C5H20orf194 chromosome 5 C20orf194 homolog;uncharacterized protein C20orf194 homolog protein-coding 625833850 LOC116901379 low-density lipoprotein receptor-related protein 1B-like 5 18255250 18548275 - 30032202 116901379 MODEL JAAIVD010000023;XM_032903247 XP_032759138 protein-coding 625833860 LOC116907777 argininosuccinate synthase-like 8 73563417 73565012 - 22301074;30032202 116907777 MODEL JAAIVD010000027;XM_032910920 XP_032766811 protein-coding 625833865 Klf6 KLF transcription factor 6 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN cellular response to endothelin (ortholog); cellular response to hydrogen peroxide (ortholog); cytokine-mediated signaling pathway (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); Hypotension (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); nucleolus (ortholog) 14 18752601 18761618 - 30032202 116883348 MODEL JAAIVD010000009;XM_032884428 XP_032740319 Krueppel-like factor 6;Kruppel like factor 6 protein-coding 625833873 LOC116895814 grancalcin-like 3 71649233 71690381 + 116895814 MODEL JAAIVD010000012 pseudo 625833874 Eef1e1 eukaryotic translation elongation factor 1 epsilon 1 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); negative regulation of cell population proliferation (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); progeria (ortholog); stomach cancer (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 14 57707576 57718365 - 30032202 116883644 MODEL JAAIVD010000009;XM_032884834 XP_032740725 eukaryotic translation elongation factor 1 epsilon-1 protein-coding 625833882 Ccdc117 coiled-coil domain containing 117 INVOLVED IN positive regulation of cell population proliferation (ortholog); positive regulation of DNA repair (ortholog); FOUND IN mitotic spindle (ortholog) 11 74474240 74485291 - 116912110 MODEL JAAIVD010000006;XM_032916011 XP_032771902 coiled-coil domain-containing protein 117 protein-coding 625833891 LOC116886985 60 kDa heat shock protein, mitochondrial-like 18 46871912 46873091 - 116886985 MODEL JAAIVD010000013 pseudo 625833892 LOC116908188 40S ribosomal protein S2-like 8 54830299 54830949 + 22301074 116908188 MODEL JAAIVD010000027;XM_032911476 XP_032767367 protein-coding 625833896 Psmg3 proteasome assembly chaperone 3 ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN chaperone-mediated protein complex assembly (ortholog); FOUND IN protein-containing complex (ortholog) 16 13365581 13368549 + 22301074;30032202 116885687 MODEL JAAIVD010000004;XM_032886994;XM_032886995 XP_032742885;XP_032742886 protein-coding 625833906 Prr36 proline rich 36 16 2340250 2347265 - 116885637 MODEL JAAIVD010000004;XM_032886944;XM_032886945;XM_032886946 XP_032742835;XP_032742836;XP_032742837 proline-rich protein 36 protein-coding 625833923 LOC116889744 neuropeptides B/W receptor type 2-like 22301074;30032202 116889744 MODEL JAAIVD010000076;XM_032890612 XP_032746503 protein-coding 625833924 Abtb3 ankyrin repeat and BTB domain containing 3 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN exploration behavior (ortholog); protein stabilization (ortholog); synaptic transmission, glutamatergic (ortholog); ASSOCIATED WITH Liver Neoplasms (ortholog); prostate cancer (ortholog); FOUND IN glutamatergic synapse (ortholog); nucleoplasm (ortholog) 1 162774546 162891050 - 22301074 116907347 MODEL JAAIVD010000025;XM_032910283;XM_032910290;XM_032910298 XP_032766174;XP_032766181;XP_032766189 Btbd11 BTB domain containing 11;ankyrin repeat and BTB/POZ domain-containing protein BTBD11 protein-coding 625833948 Fam234a family with sequence similarity 234 member A ASSOCIATED WITH basal cell carcinoma (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN cell surface (ortholog) 9 3473510 3503313 - 116909156 MODEL JAAIVD010000002;XM_032912640 XP_032768531 protein FAM234A protein-coding 625833963 LOC116886669 uncharacterized LOC116886669 17 8041704 8069021 + 116886669 MODEL JAAIVD010000011;XR_004386118 ncrna 625833969 LOC116887982 fibroblast growth factor 13 X 70323200 70329610 + 22301074;30032202 116887982 MODEL JAAIVD010000014;XM_032889418 XP_032745309 protein-coding 625833975 Ghdc GH3 domain containing FOUND IN endoplasmic reticulum (ortholog) 9 60058000 60062133 - 30032202 116910014 MODEL JAAIVD010000002;XM_032913801 XP_032769692 GH3 domain-containing protein protein-coding 625833988 Grm4 glutamate metabotropic receptor 4 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); calmodulin binding (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway (ortholog); chemical synaptic transmission (ortholog); G protein-coupled glutamate receptor signaling pathway (ortholog); ASSOCIATED WITH Nerve Degeneration (ortholog); osteosarcoma (ortholog); temporal lobe epilepsy (ortholog); FOUND IN cerebellar granule cell to Purkinje cell synapse (ortholog); cytoplasmic vesicle (ortholog); dendritic shaft (ortholog) 18 6334291 6422553 + 22301074;30032202 116887146 MODEL JAAIVD010000013;XM_032888694 XP_032744585 metabotropic glutamate receptor 4 protein-coding 625834003 Apoltp apolipoprotein lipid transfer particle homolog 9 11402358 11493421 + 22301074 116909256 MODEL JAAIVD010000002;XM_032912778 XP_032768669 LOC116909256 uncharacterized LOC116909256;uncharacterized protein LOC116909256 APPROVED protein-coding 625834064 Zbtb8a zinc finger and BTB domain containing 8A ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog) 1 28779308 28797210 + 22301074;30032202 116896162 MODEL JAAIVD010000025;XM_032897170 XP_032753061 zinc finger and BTB domain-containing protein 8A protein-coding 625834072 LOC116888617 E3 ubiquitin-protein ligase RLIM-like X 39976640 40006192 + 22301074;30032202 116888617 MODEL JAAIVD010000014;XM_032889915 XP_032745806 protein-coding 625834078 LOC116887832 E3 ubiquitin-protein ligase RNF168-like X 37135520 37136854 + 30032202 116887832 MODEL JAAIVD010000014;XM_032889345 XP_032745236 protein-coding 625834081 Bod1l1 biorientation of chromosomes in cell division 1 like 1 INVOLVED IN DNA damage response (ortholog); replication fork processing (ortholog) 11 63652704 63707832 + 116912849 MODEL JAAIVD010000006;XM_032917057;XM_032917058;XM_032917059;XM_032917060;XM_032917061;XM_032917063 XP_032772948;XP_032772949;XP_032772950;XP_032772951;XP_032772952;XP_032772954 biorientation of chromosomes in cell division protein 1-like 1 protein-coding 625834120 Rcor3 REST corepressor 3 ENCODES a protein that exhibits enzyme binding (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 10 70135882 70175855 - 30032202 116910846 MODEL JAAIVD010000005;XM_032914596 XP_032770487 protein-coding 625834135 Denr density regulated re-initiation and release factor INVOLVED IN formation of translation preinitiation complex (ortholog); IRES-dependent viral translational initiation (ortholog); ribosome disassembly (ortholog); FOUND IN cytoplasm (ortholog) 16 29930378 29951335 - 22301074;30032202 116885441 MODEL JAAIVD010000004;XM_032886724 XP_032742615 density-regulated protein protein-coding 625834147 Adgrl4 adhesion G protein-coupled receptor L4 INVOLVED IN protein-containing complex assembly (ortholog); ASSOCIATED WITH glioblastoma (ortholog); hypertrophic cardiomyopathy (ortholog); Left Ventricular Hypertrophy (ortholog); FOUND IN cytoplasmic vesicle (ortholog); plasma membrane (ortholog) 3 9445032 9549862 - 22301074;30032202 116895217 MODEL JAAIVD010000012;XM_032896548 XP_032752439 protein-coding 625834166 Cacnb2 calcium voltage-gated channel auxiliary subunit beta 2 ENCODES a protein that exhibits actin filament binding (ortholog); calcium channel regulator activity (ortholog); high voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion import (ortholog); chemical synaptic transmission (ortholog); membrane depolarization during atrial cardiac muscle cell action potential (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; calcium/calmodulin dependent kinase 2 signaling pathway; ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); autism spectrum disorder (ortholog); Brugada syndrome (ortholog); FOUND IN L-type voltage-gated calcium channel complex (ortholog); photoreceptor ribbon synapse (ortholog); voltage-gated calcium channel complex (ortholog) 14 8757848 9099314 - 22301074;30032202 116883156 MODEL JAAIVD010000009;XM_032884170;XM_032884171;XM_032884172;XM_032884173;XM_032884174;XM_032884175;XM_032884176;XM_032884177;XM_032884178;XM_032884179;XM_032884180 XP_032740061;XP_032740062;XP_032740063;XP_032740064;XP_032740065;XP_032740066;XP_032740067;XP_032740068;XP_032740069;XP_032740070;XP_032740071 voltage-dependent L-type calcium channel subunit beta-2 protein-coding 625834210 LOC116894318 glyceraldehyde-3-phosphate dehydrogenase-like 2 149943218 149944159 - 116894318 MODEL JAAIVD010000001 pseudo 625834211 Adcy1 adenylate cyclase 1 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); calcium- and calmodulin-responsive adenylate cyclase activity (ortholog); INVOLVED IN axonogenesis (ortholog); cAMP biosynthetic process (ortholog); circadian rhythm (ortholog); PARTICIPATES IN endothelin signaling pathway; G protein mediated signaling pathway via Galphas family; protein kinase A (PKA) signaling pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness 44 (ortholog); genetic disease (ortholog); Hyperkinesis (ortholog); FOUND IN axon hillock (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) 11 75972922 76078765 + 22301074;30032202 116912815 MODEL JAAIVD010000006;XM_032916983 XP_032772874 adenylate cyclase type 1 protein-coding 625834234 LOC116891908 ATP synthase subunit d, mitochondrial-like 1 5120018 5120612 + 22301074;30032202 116891908 MODEL JAAIVD010000025;XM_032893333 XP_032749224 protein-coding 625834239 LOC116897314 glyceraldehyde-3-phosphate dehydrogenase-like 3 206966774 206967763 + 116897314 MODEL JAAIVD010000012 pseudo 625834240 Golm2 golgi membrane protein 2 FOUND IN Golgi apparatus (ortholog) 5 99995606 100062030 + 116901875 MODEL JAAIVD010000023;XM_032904081;XM_032904082 XP_032759972;XP_032759973 protein CASC4 protein-coding 625834259 Ccdc12 coiled-coil domain containing 12 PARTICIPATES IN spliceosome pathway; FOUND IN nucleoplasm (ortholog) 8 101240924 101292400 + 30032202 116907677 MODEL JAAIVD010000027;XM_032910772 XP_032766663 coiled-coil domain-containing protein 12 protein-coding 625834270 Pdcd1 programmed cell death 1 ENCODES a protein that exhibits signaling receptor activity (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of immune response (ortholog); negative regulation of T cell activation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); acute myocarditis (ortholog); anogenital venereal wart (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) 4 165806356 165819479 - 30032202 116898283 MODEL JAAIVD010000003;XM_032899635 XP_032755526 programmed cell death protein 1 protein-coding 625834279 LOC116904146 uncharacterized LOC116904146 1 152670529 152676989 - 116904146 MODEL JAAIVD010000025;XR_004388332 ncrna 625834284 Kmt5b lysine methyltransferase 5B ENCODES a protein that exhibits chromatin binding (ortholog); histone H4K20 methyltransferase activity (ortholog); histone methyltransferase activity (ortholog); INVOLVED IN DNA repair (ortholog); positive regulation of double-strand break repair via nonhomologous end joining (ortholog); positive regulation of isotype switching (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal dominant intellectual developmental disorder 51 (ortholog); Developmental Disabilities (ortholog); FOUND IN condensed chromosome, centromeric region (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) 2 3828666 3845630 - 30032202 116894785 MODEL JAAIVD010000001;XM_032896436 XP_032752327 histone-lysine N-methyltransferase KMT5B protein-coding 625834294 LOC116889184 heat shock protein HSP 90-beta-like X 89059060 89061350 - 116889184 MODEL JAAIVD010000014 pseudo 625834295 Snapc4 small nuclear RNA activating complex polypeptide 4 ENCODES a protein that exhibits DNA binding (ortholog); RNA polymerase II general transcription initiation factor activity (ortholog); RNA polymerase III general transcription initiation factor activity (ortholog); INVOLVED IN snRNA transcription by RNA polymerase II (ortholog); snRNA transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH genetic disease (ortholog); long QT syndrome (ortholog); NEURODEVELOPMENTAL DISORDER WITH MOTOR REGRESSION, PROGRESSIVE SPASTIC PARAPLEGIA, AND OROMOTOR DYSFUNCTION (ortholog); FOUND IN snRNA-activating protein complex (ortholog) 5 10708642 10726080 + 116901273 MODEL JAAIVD010000023;XM_032903040 XP_032758931 snRNA-activating protein complex subunit 4 protein-coding 625834322 Impdh2 inosine monophosphate dehydrogenase 2 ENCODES a protein that exhibits identical protein binding (ortholog); IMP dehydrogenase activity (ortholog); nucleotide binding (ortholog); INVOLVED IN 'de novo' XMP biosynthetic process (ortholog); cellular response to interleukin-4 (ortholog); circadian rhythm (ortholog); PARTICIPATES IN de novo purine biosynthetic pathway; mycophenolic acid pharmacokinetics pathway; ASSOCIATED WITH Animal Disease Models (ortholog); dystonia (ortholog); lung adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 8 99890588 99895208 + 22301074;30032202 116907600 MODEL JAAIVD010000027;XM_032910650 XP_032766541 inosine-5'-monophosphate dehydrogenase 2 protein-coding 625834340 Trh thyrotropin releasing hormone ENCODES a protein that exhibits thyrotropin-releasing hormone activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adult walking behavior (ortholog); eating behavior (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amnestic disorder (ortholog); Bradycardia (ortholog); FOUND IN extracellular region (ortholog); secretory granule (ortholog) 6 54717298 54720135 + 22301074 116902722 MODEL JAAIVD010000024;XM_032905072 XP_032760963 protein-coding 625834347 Tef TEF transcription factor, PAR bZIP family member ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); double-stranded DNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog) 1 251542185 251566469 + 30032202 116914062 MODEL JAAIVD010000025;XM_032918356;XM_032918365 XP_032774247;XP_032774256 thyrotroph embryonic factor protein-coding 625834358 LOC116898385 transformer-2 protein homolog alpha-like 4 72259500 72303300 + 116898385 MODEL JAAIVD010000003 pseudo 625834359 LOC116883168 60S ribosomal protein L27a-like 14 60834332 60834764 + 116883168 MODEL JAAIVD010000009 pseudo 625834360 LOC116897928 olfactory receptor 5K3-like 4 42779404 42780330 - 116897928 MODEL JAAIVD010000003 pseudo 625834361 LOC116895658 uncharacterized LOC116895658 3 185922241 185972735 + 116895658 MODEL JAAIVD010000012;XR_004387297 ncrna 625834366 Gale UDP-galactose-4-epimerase ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); UDP-glucose 4-epimerase activity (ortholog); INVOLVED IN galactose catabolic process (ortholog); galactose catabolic process via UDP-galactose, Leloir pathway (ortholog); galactose metabolic process (ortholog); PARTICIPATES IN galactokinase deficiency pathway; galactose metabolic pathway; galactosemia pathway; ASSOCIATED WITH galactose epimerase deficiency (ortholog); galactosemia (ortholog); genetic disease (ortholog) 1 22261586 22264847 - 22301074;30032202 116894479 MODEL JAAIVD010000025;XM_032896192 XP_032752083 UDP-glucose 4-epimerase protein-coding 625834381 Mapk4 mitogen-activated protein kinase 4 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); protein kinase binding (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 15 57988683 58038315 + 22301074;30032202 116884321 MODEL JAAIVD010000010;XM_032885454 XP_032741345 protein-coding 625834390 LOC116893208 pantothenate kinase 1-like 2 108509510 108518883 - 116893208 MODEL JAAIVD010000001 pseudo 625834391 Papss2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 ENCODES a protein that exhibits adenylylsulfate kinase activity (ortholog); sulfate adenylyltransferase (ATP) activity (ortholog); INVOLVED IN 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process (ortholog); blood coagulation (ortholog); bone development (ortholog); PARTICIPATES IN sulfite oxidase deficiency pathway; ASSOCIATED WITH brachyolmia (ortholog); genetic disease (ortholog); spondyloepimetaphyseal dysplasia, Pakistani type (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) 2 32628119 32703725 + 22301074;30032202 116891092 MODEL JAAIVD010000001;XM_032891809 XP_032747700 bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2 protein-coding 625834408 LOC116911455 lymphotactin 10 44108169 44111831 - 22301074;30032202 116911455 MODEL JAAIVD010000005;XM_032915425 XP_032771316 protein-coding 625834415 Hoxc8 homeobox C8 ENCODES a protein that exhibits DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); neuron differentiation (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 1 260088960 260092019 - 22301074;30032202 116890186 MODEL JAAIVD010000025;XM_032890922 XP_032746813 homeobox protein Hox-C8 protein-coding 625834420 Ywhab tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta ENCODES a protein that exhibits enzyme binding (ortholog); histone deacetylase binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of G protein-coupled receptor signaling pathway (ortholog); negative regulation of protein import into nucleus (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; mTOR signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH brain ischemia (ortholog); Experimental Seizures (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 5 153958612 153981427 - 30032202 116902369 MODEL JAAIVD010000023;XM_032904865;XM_032904866 XP_032760756;XP_032760757 14-3-3 protein beta/alpha protein-coding 625834434 Xrn2 5'-3' exoribonuclease 2 ENCODES a protein that exhibits 5'-3' exonuclease activity (ortholog); 5'-3' RNA exonuclease activity (ortholog); identical protein binding (ortholog); INVOLVED IN hippocampus development (ortholog); neuron differentiation (ortholog); retina development in camera-type eye (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; ribosome biogenesis pathway; RNA polymerase II transcription termination pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); leiomyosarcoma (ortholog); lung cancer (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 5 126636476 126674419 + 30032202 116902067 MODEL JAAIVD010000023;XM_032904356 XP_032760247 protein-coding 625834451 Ptp4a1 protein tyrosine phosphatase 4A1 ENCODES a protein that exhibits protein tyrosine phosphatase activity (ortholog); INVOLVED IN positive regulation of cell migration (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) 4 107700100 107706973 - 22301074;30032202 116899262 MODEL JAAIVD010000003;XM_032900878;XM_032900879 XP_032756769;XP_032756770 protein tyrosine phosphatase type IVA 1 protein-coding 625834463 LOC116887279 ELAV-like protein 1 1 221090104 221120234 - 116887279 MODEL JAAIVD010000025 pseudo 625834464 Apba1 amyloid beta precursor protein binding family A member 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); identical protein binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); gamma-aminobutyric acid secretion (ortholog); glutamate secretion (ortholog); FOUND IN dendritic spine (ortholog); glutamatergic synapse (ortholog); Golgi apparatus (ortholog) 2 23999610 24065051 + 22301074;30032202 116891043 MODEL JAAIVD010000001;XM_032891727;XM_032891728 XP_032747618;XP_032747619 amyloid-beta A4 precursor protein-binding family A member 1 protein-coding 625834483 Cuedc1 CUE domain containing 1 9 82620066 82637870 - 22301074 116909485 MODEL JAAIVD010000002;XM_032913082 XP_032768973 CUE domain-containing protein 1 protein-coding 625834496 Batf3 basic leucine zipper ATF-like transcription factor 3 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN dendritic cell differentiation (ortholog); myeloid dendritic cell differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH leprosy (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 10 69189042 69200720 + 22301074;30032202 116911233 MODEL JAAIVD010000005;XM_032915133 XP_032771024 basic leucine zipper transcriptional factor ATF-like 3 protein-coding 625834503 LOC116894414 40S ribosomal protein S20-like 2 158627051 158627412 - 116894414 MODEL JAAIVD010000001 pseudo 625834504 LOC116908773 signal recognition particle 19 kDa protein-like 9 65455163 65455636 + 22301074;30032202 116908773 MODEL JAAIVD010000002;XM_032912146 XP_032768037 protein-coding 625834508 Gsdmd gasdermin D ENCODES a protein that exhibits cardiolipin binding (ortholog); phosphatidic acid binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN defense response to Gram-negative bacterium (ortholog); defense response to Gram-positive bacterium (ortholog); pore complex assembly (ortholog); ASSOCIATED WITH lung adenocarcinoma (ortholog); FOUND IN cytosol (ortholog); extracellular region (ortholog); membrane (ortholog) 1 248175688 248180356 + 30032202 116912839 MODEL JAAIVD010000025;XM_032917035 XP_032772926 gasdermin-D protein-coding 625834524 LOC116892029 rho-related GTP-binding protein RhoG-like 2 139936299 139937593 + 22301074;30032202 116892029 MODEL JAAIVD010000001;XM_032893487 XP_032749378 protein-coding 625834529 Uba52 ubiquitin A-52 residue ribosomal protein fusion product 1 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); response to insecticide (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Brain Injuries (ortholog); colon carcinoma (ortholog); Diabetic Nephropathies (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosolic large ribosomal subunit (ortholog) 13 12762939 12765169 - 22301074;30032202 116914665 MODEL JAAIVD010000008;XM_032919068;XM_032919069;XM_032919070 XP_032774959;XP_032774960;XP_032774961 ubiquitin-60S ribosomal protein L40 protein-coding 625834544 LOC116883932 cyclin-dependent kinases regulatory subunit 2-like 14 11033443 11033774 - 116883932 MODEL JAAIVD010000009 pseudo 625834545 LOC116900990 Ig kappa chain V-V region L7-like 5 109347224 109347815 - 116900990 MODEL JAAIVD010000023 pseudo 625834546 Rab37 RAB37, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); INVOLVED IN positive regulation of autophagy (ortholog); regulation of eye photoreceptor cell development (ortholog); FOUND IN endoplasmic reticulum-Golgi intermediate compartment (ortholog); photoreceptor connecting cilium (ortholog); secretory granule (ortholog) 9 68940215 69008321 - 22301074;30032202 116909548 MODEL JAAIVD010000002;XM_032913165;XM_032913166 XP_032769056;XP_032769057 ras-related protein Rab-37 protein-coding 625834563 LOC116911976 protein transport protein Sec61 subunit gamma-like 11 39036912 39037172 - 116911976 MODEL JAAIVD010000006 pseudo 625834564 Cpa4 carboxypeptidase A4 ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); INVOLVED IN hormone catabolic process (ortholog); peptide catabolic process (ortholog); FOUND IN extracellular region (ortholog) 6 108970298 108992933 - 22301074;30032202 116902910 MODEL JAAIVD010000024;XM_032905237 XP_032761128 protein-coding 625834577 LOC116894052 olfactory receptor 51F2-like 2 102717090 102718034 + 22301074 116894052 MODEL JAAIVD010000001;XM_032895773 XP_032751664 protein-coding 625834580 LOC116899892 small nucleolar RNA SNORA17 4 119024703 119024821 - 116899892 MODEL JAAIVD010000003 pseudo 625834581 Ppfia4 PPFI scaffold protein A4 ASSOCIATED WITH atrial fibrillation (ortholog); FOUND IN glutamatergic synapse (ortholog); parallel fiber to Purkinje cell synapse (ortholog); presynapse (ortholog) 10 1346447 1392589 + 22301074;30032202 116911097 MODEL JAAIVD010000005;XM_032914928 XP_032770819 PTPRF interacting protein alpha 4;liprin-alpha-4 protein-coding 625834614 Rhobtb3 Rho related BTB domain containing 3 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); small GTPase binding (ortholog); INVOLVED IN male gonad development (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog) 3 221272863 221317086 + 22301074;30032202 116897362 MODEL JAAIVD010000012;XM_032899122 XP_032755013 rho-related BTB domain-containing protein 3 protein-coding 625834626 Sox18 SRY-box transcription factor 18 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN angiogenesis (ortholog); blood vessel development (ortholog); blood vessel endothelial cell migration (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); basal cell carcinoma (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) 5 158768529 158770769 - 30032202 116900802 MODEL JAAIVD010000023;XM_032902518 XP_032758409 transcription factor SOX-18 protein-coding 625834632 Mindy4b MINDY family member 4B 4 100246785 100269323 + 30032202 116898110 MODEL JAAIVD010000003;XM_032899495 XP_032755386 inactive ubiquitin carboxyl-terminal hydrolase MINDY-4B protein-coding 625834644 Ppp2r2b protein phosphatase 2 regulatory subunit Bbeta ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN mitochondrial fission (ortholog); mitochondrial fragmentation involved in apoptotic process (ortholog); neuron differentiation (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); brain disease (ortholog); breast cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 15 2189174 2292650 - 22301074;30032202 116884783 MODEL JAAIVD010000010;XM_032886016 XP_032741907 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform protein-coding 625834655 Kat6a lysine acetyltransferase 6A ENCODES a protein that exhibits acetyltransferase activity (ortholog); chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN aorta morphogenesis (ortholog); cellular senescence (ortholog); embryonic hemopoiesis (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); Arboleda-Tham syndrome (ortholog); FOUND IN MOZ/MORF histone acetyltransferase complex (ortholog); nuclear speck (ortholog); nucleolus (ortholog) 13 63485473 63563246 - 22301074;30032202 116914894 MODEL JAAIVD010000008;XM_032919337 XP_032775228 histone acetyltransferase KAT6A protein-coding 625834677 LOC116888728 ral guanine nucleotide dissociation stimulator-like X 84817802 84818365 - 116888728 MODEL JAAIVD010000014;XM_032890018 XP_032745909 protein-coding 625834682 LOC116895198 small proline-rich protein 2B 3 739387 739629 + 22301074 116895198 MODEL JAAIVD010000012;XM_032896539 XP_032752430 protein-coding 625834685 LOC116894665 trace amine-associated receptor 3 2 210010907 210011935 + 22301074;30032202 116894665 MODEL JAAIVD010000001;XM_032896368 XP_032752259 protein-coding 625834688 LOC116911547 GTP-binding nuclear protein Ran-like 10 3901920 3903326 - 116911547 MODEL JAAIVD010000005 pseudo 625834689 LOC116911653 G1/S-specific cyclin-D2-like 10 25543058 25544684 + 30032202 116911653 MODEL JAAIVD010000005;XM_032915609 XP_032771500 protein-coding 625834694 Muc19 mucin 19, oligomeric ENCODES a protein that exhibits hydroxyapatite binding (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); B cell differentiation (ortholog); B cell proliferation (ortholog); ASSOCIATED WITH inflammatory bowel disease (ortholog); Sjogren's syndrome (ortholog) 1 264881066 264907040 + 22301074;30032202 116890335 MODEL JAAIVD010000025;XM_032891005 XP_032746896 mucin-19 protein-coding 625834725 Prag1 PEAK1 related, kinase-activating pseudokinase 1 ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); INVOLVED IN cell migration (ortholog); negative regulation of neuron projection development (ortholog); positive regulation of Rho protein signal transduction (ortholog); FOUND IN cytoplasm (ortholog); focal adhesion (ortholog); nucleus (ortholog) 13 50929912 50980123 - 22301074;30032202 116914472 MODEL JAAIVD010000008;XM_032918771 XP_032774662 inactive tyrosine-protein kinase PRAG1 protein-coding 625834734 Tchh trichohyalin ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN intermediate filament organization (ortholog); ASSOCIATED WITH Uncombable Hair Syndrome (ortholog); Uncombable Hair Syndrome 3 (ortholog) 3 121227166 121234127 - 22301074;30032202 116895547 MODEL JAAIVD010000012;XM_032896788 XP_032752679 protein-coding 625834740 LOC116914059 ran guanine nucleotide release factor-like 12 67953590 67954148 + 116914059 MODEL JAAIVD010000007 pseudo 625834741 LOC116901816 heterogeneous nuclear ribonucleoprotein A3-like 5 2825560 2827058 + 116901816 MODEL JAAIVD010000023 pseudo 625834742 Tesk2 testis associated actin remodelling kinase 2 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); focal adhesion assembly (ortholog); protein phosphorylation (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 1 40377920 40440490 + 22301074;30032202 116898478 MODEL JAAIVD010000025;XM_032899728 XP_032755619 dual specificity testis-specific protein kinase 2 protein-coding 625834756 Trnav-uac transfer RNA valine (anticodon UAC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889669 MODEL JAAIVD010000045 trna 625834757 Usp43 ubiquitin specific peptidase 43 ASSOCIATED WITH congenital heart disease (ortholog) 9 47462902 47524080 - 22301074 116908907 MODEL JAAIVD010000002;XM_032912362 XP_032768253 ubiquitin carboxyl-terminal hydrolase 43 protein-coding 625834776 LOC116899236 protection of telomeres protein 1-like 4 93148397 93215293 - 22301074;30032202 116899236 MODEL JAAIVD010000003;XM_032900838 XP_032756729 protein-coding 625834797 LOC116900409 olfactory receptor 140-like 5 70229970 70230908 + 22301074 116900409 MODEL JAAIVD010000023;XM_032902154 XP_032758045 protein-coding 625834800 LOC116902729 vomeronasal type-1 receptor 90 6 56676183 56677477 + 22301074;30032202 116902729 MODEL JAAIVD010000024;XM_032905079 XP_032760970 protein-coding 625834805 LOC116889481 small nucleolar RNA SNORA21 X 52125774 52125877 + 116889481 MODEL JAAIVD010000014;XR_004386432 snorna 625834808 LOC116893296 glyceraldehyde-3-phosphate dehydrogenase-like 2 149418761 149419857 + 116893296 MODEL JAAIVD010000001 pseudo 625834809 Sncg synuclein gamma ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-tubulin binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); aggressive behavior (ortholog); cellular response to hydrostatic pressure (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); centrosome (ortholog) 13 10142247 10146667 - 30032202 116914404 MODEL JAAIVD010000008;XM_032918642 XP_032774533 gamma-synuclein protein-coding 625834818 LOC116906656 high mobility group protein B1-like 1 156539770 156540718 + 22301074;30032202 116906656 MODEL JAAIVD010000025;XM_032909445 XP_032765336 protein-coding 625834823 Trnap-agg transfer RNA proline (anticodon AGG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 845072 845143 - 116910820 MODEL JAAIVD010000002 trna 625834824 Cenps centromere protein S ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); interstrand cross-link repair (ortholog); FOUND IN chromatin (ortholog); FANCM-MHF complex (ortholog); Fanconi anaemia nuclear complex (ortholog) 1 11637065 11646681 + 22301074;30032202 116892678 MODEL JAAIVD010000025;XM_032894520;XM_032894529 XP_032750411;XP_032750420 protein-coding 625834837 LOC116898309 60S acidic ribosomal protein P0-like 4 32915624 32916568 - 22301074;30032202 116898309 MODEL JAAIVD010000003;XM_032899651 XP_032755542 protein-coding 625834840 LOC116893723 olfactory receptor 1S1-like 2 13733064 13734053 + 22301074 116893723 MODEL JAAIVD010000001;XM_032895437 XP_032751328 protein-coding 625834843 LOC116897806 proteasome activator complex subunit 3-like 4 6940610 6941370 - 116897806 MODEL JAAIVD010000003 pseudo 625834844 LOC116907014 40S ribosomal protein S2-like 8 53103587 53104444 + 116907014 MODEL JAAIVD010000027 pseudo 625834845 Clec6a C-type lectin domain containing 6A ENCODES a protein that exhibits calcium ion binding (ortholog); carbohydrate binding (ortholog); D-mannose binding (ortholog); INVOLVED IN antifungal innate immune response (ortholog); defense response to fungus (ortholog); detection of yeast (ortholog); FOUND IN plasma membrane (ortholog) 6 23997285 24012290 + 30032202 116903303 MODEL JAAIVD010000024;XM_032905727;XM_032905728;XM_032905729 XP_032761618;XP_032761619;XP_032761620 C-type lectin domain family 6 member A protein-coding 625834855 LOC116883506 prolactin-8A5 14 46304215 46310414 + 22301074;30032202 116883506 MODEL JAAIVD010000009;XM_032884675;XM_032884676;XM_032884677 XP_032740566;XP_032740567;XP_032740568 protein-coding 625834875 Cog6 component of oligomeric golgi complex 6 INVOLVED IN Golgi organization (ortholog); retrograde transport, vesicle recycling within Golgi (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation type IIl (ortholog); genetic disease (ortholog); FOUND IN COG complex (ortholog) 3 101412945 101448974 + 22301074;30032202 116896883 MODEL JAAIVD010000012;XM_032898428 XP_032754319 conserved oligomeric Golgi complex subunit 6 protein-coding 625834898 Knop1 lysine rich nucleolar protein 1 FOUND IN nucleolus (ortholog) 2 82788378 82804243 + 116891601 MODEL JAAIVD010000001;XM_032892793;XM_032892794;XM_032892795 XP_032748684;XP_032748685;XP_032748686 lysine-rich nucleolar protein 1 protein-coding 625834911 Grhl3 grainyhead like transcription factor 3 ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN central nervous system development (ortholog); cochlea morphogenesis (ortholog); ectoderm development (ortholog); ASSOCIATED WITH cleft palate (ortholog); Fetal Death (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 1 22649880 22682436 + 30032202 116886692 MODEL JAAIVD010000025;XM_032888192 XP_032744083 grainyhead-like protein 3 homolog protein-coding 625834930 LOC116912553 60S ribosomal protein L17-like 11 93104168 93104721 - 116912553 MODEL JAAIVD010000006 pseudo 625834931 LOC116887110 keratin-associated protein 12-1-like 18 1043536 1043928 + 22301074;30032202 116887110 MODEL JAAIVD010000013;XM_032888647;XM_032888648;XM_032888649;XM_032888650 XP_032744538;XP_032744539;XP_032744540;XP_032744541 protein-coding 625834943 LOC116893634 solute carrier family 22 member 19-like 2 9391883 9447967 + 22301074;30032202 116893634 MODEL JAAIVD010000001;XM_032895346;XM_032895347 XP_032751237;XP_032751238 protein-coding 625834961 LOC116902592 small nucleolar RNA SNORA17 5 68761102 68761222 + 116902592 MODEL JAAIVD010000023 pseudo 625834962 Dapk2 death associated protein kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); calmodulin binding (ortholog); identical protein binding (ortholog); INVOLVED IN anoikis (ortholog); intracellular signal transduction (ortholog); neutrophil migration (ortholog); ASSOCIATED WITH acute promyelocytic leukemia (ortholog); colorectal cancer (ortholog); Hepatomegaly (ortholog); FOUND IN cytoplasm (ortholog) 8 60503259 60614319 + 22301074;30032202 116906831 MODEL JAAIVD010000027;XM_032909715;XM_032909716 XP_032765606;XP_032765607 death-associated protein kinase 2 protein-coding 625834980 Sprr4 small proline rich protein 4 FOUND IN cytosol (ortholog) 3 1568980 1569223 + 116895264 MODEL JAAIVD010000012;XM_032896581 XP_032752472 small proline-rich protein 4 protein-coding 625834984 LOC116896250 zinc finger protein 728-like 3 28351955 28369899 + 116896250 MODEL JAAIVD010000012 pseudo 625834985 LOC116899271 uncharacterized LOC116899271 4 110365330 110367402 + 116899271 MODEL JAAIVD010000003;XM_032900893 XP_032756784 uncharacterized protein LOC116899271 protein-coding 625834990 LOC116907057 heat shock cognate 71 kDa protein-like 8 1765586 1767475 + 116907057 MODEL JAAIVD010000027 pseudo 625834991 LOC116913467 small nuclear ribonucleoprotein-associated protein N-like 12 27875418 27876247 - 22301074;30032202 116913467 MODEL JAAIVD010000007;XM_032917671 XP_032773562 protein-coding 625834995 Ffar4 free fatty acid receptor 4 ENCODES a protein that exhibits arrestin family protein binding (ortholog); fatty acid binding (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); brown fat cell differentiation (ortholog); fat cell differentiation (ortholog); FOUND IN cilium (ortholog); endocytic vesicle (ortholog); endosome membrane (ortholog) 2 35645464 35664179 - 22301074 116891123 MODEL JAAIVD010000001;XM_032891845 XP_032747736 protein-coding 625835002 Tspear thrombospondin type laminin G domain and EAR repeats INVOLVED IN hair cycle process (ortholog); Notch signaling pathway (ortholog); regulation of Notch signaling pathway (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 98 (ortholog); ectodermal dysplasia 14 (ortholog); genetic disease (ortholog); FOUND IN cell surface (ortholog); ciliary membrane (ortholog); stereocilium (ortholog) 18 1027781 1191197 + 30032202 116887093 MODEL JAAIVD010000013;XM_032888604 XP_032744495 thrombospondin-type laminin G domain and EAR repeat-containing protein protein-coding 625835017 Dydc1 DPY30 domain containing 1 FOUND IN radial spoke (ortholog) 13 19592428 19606606 + 30032202 116915053 MODEL JAAIVD010000008;XM_032919469 XP_032775360 DPY30 domain-containing protein 1 protein-coding 625835026 LOC116896575 uncharacterized LOC116896575 3 62219122 62231790 - 116896575 MODEL JAAIVD010000012;XR_004387345 ncrna 625835031 LOC116888377 DNA-(apurinic or apyrimidinic site) lyase 2-like X 20021998 20036970 + 22301074;30032202 116888377 MODEL JAAIVD010000014;XM_032889655 XP_032745546 protein-coding 625835041 Rptor regulatory associated protein of MTOR complex 1 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); enzyme-substrate adaptor activity (ortholog); protein kinase activator activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to glucose stimulus (ortholog); cellular response to L-leucine (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH developmental coordination disorder (ortholog); lung metastasis (ortholog); nicotine dependence (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) 9 64118897 64412297 - 22301074;30032202 116910238 MODEL JAAIVD010000002;XM_032914128 XP_032770019 regulatory-associated protein of mTOR protein-coding 625835079 LOC116883788 LIM domain kinase 2-like 1 206586899 206587789 + 116883788 MODEL JAAIVD010000025 pseudo 625835080 LOC116904417 myosin light polypeptide 6-like 6 105253938 105255614 - 116904417 MODEL JAAIVD010000024 pseudo 625835081 LOC116909502 40S ribosomal protein S3a-like 9 7849113 7850085 + 22301074;30032202 116909502 MODEL JAAIVD010000002;XM_032913107 XP_032768998 protein-coding 625835087 Alkbh8 alkB homolog 8, tRNA methyltransferase ENCODES a protein that exhibits iron ion binding (ortholog); tRNA (5-carboxymethyluridine(34)-5-O)-methyltransferase activity (ortholog); tRNA (uridine) methyltransferase activity (ortholog); INVOLVED IN DNA damage response (ortholog); tRNA methylation (ortholog); tRNA wobble uridine modification (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 71 (ortholog); Breast Neoplasms (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 7 228925 327548 - 22301074;30032202 116905723 MODEL JAAIVD010000026;XM_032908692;XM_032908693 XP_032764583;XP_032764584 alkylated DNA repair protein alkB homolog 8 protein-coding 625835107 Rpl21 ribosomal protein L21 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH hypotrichosis (ortholog); hypotrichosis 12 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic large ribosomal subunit (ortholog) 16 7603575 7604064 + 22301074;30032202 116885812 MODEL JAAIVD010000004;XM_032887152 XP_032743043 60S ribosomal protein L21 protein-coding 625835111 LOC116900756 uncharacterized LOC116900756 1 76112616 76442747 + 116900756 MODEL JAAIVD010000025;XR_004387949 ncrna 625835116 Slamf7 SLAM family member 7 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN regulation of natural killer cell activation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); COVID-19 (ortholog); FOUND IN endoplasmic reticulum (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) 10 50815601 50829339 - 30032202 116911621 MODEL JAAIVD010000005;XM_032915588;XM_032915589 XP_032771479;XP_032771480 protein-coding 625835129 LOC116904786 small nucleolar RNA SNORD94 6 74908695 74908831 - 116904786 MODEL JAAIVD010000024;XR_004388450 snorna 625835132 LOC116888082 ribosome biogenesis protein NSA2 homolog X 91152718 91176104 + 116888082 MODEL JAAIVD010000014 pseudo 625835133 LOC116889550 U2 spliceosomal RNA X 109168269 109168374 - 116889550 MODEL JAAIVD010000014 pseudo 625835134 LOC116895356 60S ribosomal protein L23a-like 3 47721343 47724523 - 22301074;30032202 116895356 MODEL JAAIVD010000012;XM_032896654 XP_032752545 protein-coding 625835138 Surf4 surfeit 4 ENCODES a protein that exhibits cargo receptor activity (ortholog); COPII receptor activity (ortholog); INVOLVED IN COPII-coated vesicle cargo loading (ortholog); early endosome to Golgi transport (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN COPII-coated ER to Golgi transport vesicle (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum exit site (ortholog) 5 9721826 9734652 + 22301074;30032202 116901253 MODEL JAAIVD010000023;XM_032903008 XP_032758899 surfeit locus protein 4 protein-coding 625835148 LOC116889920 olfactory receptor 6C68-like 1 160692014 160692965 - 22301074;30032202 116889920 MODEL JAAIVD010000025;XM_032890737 XP_032746628 protein-coding 625835151 LOC116889592 RNA-binding motif protein, Y chromosome, family 1 member B-like Y 1835960 1846362 + 22301074;30032202 116889592 MODEL JAAIVD010000015;XM_032890528 XP_032746419 protein-coding 625835164 Bend5 BEN domain containing 5 INVOLVED IN negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN Golgi apparatus (ortholog) 1 44099136 44145140 + 22301074;30032202 116898894 MODEL JAAIVD010000025;XM_032900295;XM_032900303;XM_032900312;XM_032900320 XP_032756186;XP_032756194;XP_032756203;XP_032756211 BEN domain-containing protein 5 protein-coding 625835186 LOC116895480 arylacetamide deacetylase-like 2 3 95097479 95113631 - 22301074 116895480 MODEL JAAIVD010000012;XM_032896739 XP_032752630 protein-coding 625835193 LOC116891578 uncharacterized LOC116891578 2 80952660 80954946 + 116891578 MODEL JAAIVD010000001;XR_004386847 ncrna 625835197 Trpa1 transient receptor potential cation channel subfamily A member 1 ENCODES a protein that exhibits calcium channel activity (ortholog); channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN calcium ion transmembrane import into cytosol (ortholog); calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); ASSOCIATED WITH Abdominal Pain (ortholog); allergic asthma (ortholog); allergic rhinitis (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); plasma membrane (ortholog) 1 149359312 149407510 - 22301074 116889785 MODEL JAAIVD010000025;XM_032890638;XM_032890645 XP_032746529;XP_032746536 protein-coding 625835228 Ndufs8 NADH:ubiquinone oxidoreductase core subunit S8 ENCODES a protein that exhibits NADH dehydrogenase (ubiquinone) activity (ortholog); NADH dehydrogenase activity (ortholog); INVOLVED IN mitochondrial electron transport, NADH to ubiquinone (ortholog); mitochondrial respiratory chain complex I assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); Leigh disease (ortholog); mitochondrial complex I deficiency (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) 2 3737423 3741358 + 22301074;30032202 116890800 MODEL JAAIVD010000001;XM_032891280;XM_032891281;XM_032891282 XP_032747171;XP_032747172;XP_032747173 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial protein-coding 625835247 LOC116886496 uncharacterized LOC116886496 17 39320664 39329667 + 116886496 MODEL JAAIVD010000011;XM_032888000;XM_032888001 XP_032743891;XP_032743892 uncharacterized protein LOC116886496 protein-coding 625835260 LOC116890537 small nucleolar RNA SNORA17 1 237834916 237835047 + 116890537 MODEL JAAIVD010000025;XR_004386718 snorna 625835263 Cmtr2 cap methyltransferase 2 ENCODES a protein that exhibits methyltransferase cap2 activity (ortholog); INVOLVED IN 7-methylguanosine mRNA capping (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); lung adenocarcinoma (ortholog); polycystic ovary syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 17 29921737 29928644 + 30032202 116886353 MODEL JAAIVD010000011;XM_032887806 XP_032743697 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2 protein-coding 625835269 LOC116897617 small nucleolar RNA SNORA17 3 161211525 161211656 + 116897617 MODEL JAAIVD010000012;XR_004387599 snorna 625835272 LOC116884811 glyceraldehyde-3-phosphate dehydrogenase-like 15 64550503 64551504 + 116884811 MODEL JAAIVD010000010 pseudo 625835273 Cibar1 CBY1 interacting BAR domain containing 1 ENCODES a protein that exhibits phospholipid binding (ortholog); INVOLVED IN cilium assembly (ortholog); inner mitochondrial membrane organization (ortholog); limb morphogenesis (ortholog); ASSOCIATED WITH ciliopathy (ortholog); polydactyly (ortholog); Postaxial Polydactyly, Type A1 (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); ciliary base (ortholog) 1 131402031 131421047 + 22301074;30032202 116903297 MODEL JAAIVD010000025;XM_032905724;XM_032905732 XP_032761615;XP_032761623 protein FAM92A protein-coding 625835290 LOC116891427 60S ribosomal protein L10-like 2 9785470 9861855 - 116891427 MODEL JAAIVD010000001 pseudo 625835291 Asic4 acid sensing ion channel subunit family member 4 ENCODES a protein that exhibits pH-gated sodium channel activity (ortholog); INVOLVED IN behavioral fear response (ortholog) 4 148802920 148824567 + 22301074;30032202 116899535 MODEL JAAIVD010000003;XM_032901411 XP_032757302 acid-sensing ion channel 4 protein-coding 625835305 LOC116903041 vomeronasal type-1 receptor 100-like 6 159439600 159440517 + 22301074;30032202 116903041 MODEL JAAIVD010000024;XM_032905343 XP_032761234 protein-coding 625835308 Rcsd1 RCSD domain containing 1 ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN cellular hyperosmotic response (ortholog); skeletal muscle contraction (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 10 44754886 44814927 - 30032202 116911548 MODEL JAAIVD010000005;XM_032915538 XP_032771429 capZ-interacting protein protein-coding 625835319 LOC116886589 putative RNA-binding protein Luc7-like 1 17 3049177 3050076 - 116886589 MODEL JAAIVD010000011 pseudo 625835320 LOC116894983 small nucleolar RNA SNORA9 2 175311265 175311393 + 116894983 MODEL JAAIVD010000001;XR_004387174 snorna 625835323 LOC116907586 olfactory receptor 7E24-like 8 15388752 15389711 + 22301074;30032202 116907586 MODEL JAAIVD010000027;XM_032910626 XP_032766517 protein-coding 625835326 LOC116902741 gastrokine-3-like 6 58930462 58936058 + 30032202 116902741 MODEL JAAIVD010000024;XM_032905089 XP_032760980 protein-coding 625835335 Dnajb11 DnaJ heat shock protein family (Hsp40) member B11 ENCODES a protein that exhibits misfolded protein binding (ortholog); signaling receptor binding (ortholog); unfolded protein binding (ortholog); INVOLVED IN mRNA modification (ortholog); negative regulation of neurogenesis (ortholog); positive regulation of ATP-dependent activity (ortholog); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway; ASSOCIATED WITH autosomal dominant polycystic kidney disease (ortholog); cystic kidney disease (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum chaperone complex (ortholog) 4 7533376 7549582 + 22301074;30032202 116898722 MODEL JAAIVD010000003;XM_032900020 XP_032755911 dnaJ homolog subfamily B member 11 protein-coding 625835349 Nfatc3 nuclear factor of activated T cells 3 ENCODES a protein that exhibits chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN blood vessel remodeling (ortholog); branching involved in blood vessel morphogenesis (ortholog); calcineurin-NFAT signaling cascade (ortholog); PARTICIPATES IN calcineurin signaling pathway; endothelin signaling pathway; nuclear factor of activated T-cells signaling pathway; ASSOCIATED WITH keratoconus (ortholog); Left Ventricular Hypertrophy (ortholog); Right Ventricular Hypertrophy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 17 25804233 25870045 + 30032202 116886704 MODEL JAAIVD010000011;XM_032888212 XP_032744103 nuclear factor of activated T-cells, cytoplasmic 3 protein-coding 625835363 Gdi2 GDP dissociation inhibitor 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); Rab GDP-dissociation inhibitor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN negative regulation of cilium assembly (ortholog); negative regulation of protein localization to cilium (ortholog); small GTPase-mediated signal transduction (ortholog); PARTICIPATES IN Rab family mediated signaling pathway; ASSOCIATED WITH Down syndrome (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); synapse (ortholog) 14 17891416 17917430 + 22301074;30032202 116883826 MODEL JAAIVD010000009;XM_032885083 XP_032740974 rab GDP dissociation inhibitor beta protein-coding 625835378 LOC116889497 small nucleolar RNA SNORA48 X 21429373 21429504 - 116889497 MODEL JAAIVD010000014 pseudo 625835379 LOC116907746 olfactory receptor 147-like 8 31656511 31657446 + 22301074;30032202 116907746 MODEL JAAIVD010000027;XM_032910883 XP_032766774 protein-coding 625835383 Sgk1 serum/glucocorticoid regulated kinase 1 ENCODES a protein that exhibits 3-phosphoinositide-dependent protein kinase binding (ortholog); protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to aldosterone (ortholog); cellular response to insulin stimulus (ortholog); DNA damage response (ortholog); PARTICIPATES IN glucocorticoid signaling pathway; insulin signaling pathway; mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); FOUND IN nuclear speck (ortholog); perinuclear region of cytoplasm (ortholog) 2 208448634 208572960 + 22301074 116892937 MODEL JAAIVD010000001;XM_032894876;XM_032894877;XM_032894878;XM_032894879 XP_032750767;XP_032750768;XP_032750769;XP_032750770 serine/threonine-protein kinase Sgk1 protein-coding 625835410 LOC116894162 olfactory receptor 2D3-like 2 105028761 105029690 + 22301074 116894162 MODEL JAAIVD010000001;XM_032895879 XP_032751770 protein-coding 625835414 LOC116890606 small nucleolar RNA SNORA79 1 171786262 171786405 - 116890606 MODEL JAAIVD010000025;XR_004386757 snorna 625835417 LOC116885584 sulfotransferase 1C2-like 1 185211955 185213343 + 116885584 MODEL JAAIVD010000025 pseudo 625835418 LOC116890371 U6 spliceosomal RNA 1 13252373 13252479 - 116890371 MODEL JAAIVD010000025;XR_004386586 snrna 625835421 LOC116895494 60S ribosomal protein L18a-like 3 104126119 104126674 + 116895494 MODEL JAAIVD010000012 pseudo 625835422 Hnrnpl heterogeneous nuclear ribonucleoprotein L ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); mRNA CDS binding (ortholog); pre-mRNA intronic binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); circadian rhythm (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH brain cancer (ortholog); Breast Neoplasms (ortholog); Disease Progression (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 2 167180433 167193397 - 22301074;30032202 116892373 MODEL JAAIVD010000001;XM_032894033;XM_032894034;XM_032894035 XP_032749924;XP_032749925;XP_032749926 protein-coding 625835445 Npm3 nucleophosmin/nucleoplasmin 3 INVOLVED IN rRNA processing (ortholog); rRNA transcription (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); FOUND IN nucleolus (ortholog) 2 45220794 45222762 - 30032202 116891231 MODEL JAAIVD010000001;XM_032892080 XP_032747971 nucleoplasmin-3 protein-coding 625835455 LOC116911873 U6 spliceosomal RNA 10 46592647 46592753 + 116911873 MODEL JAAIVD010000005;XR_004389387 snrna 625835458 LOC116914530 ribosomal oxygenase 2-like 13 32916519 32917990 - 116914530 MODEL JAAIVD010000008 pseudo 625835459 Grb10 growth factor receptor bound protein 10 ENCODES a protein that exhibits identical protein binding (ortholog); insulin receptor binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN ERK1 and ERK2 cascade (ortholog); gene expression (ortholog); insulin receptor signaling pathway (ortholog); PARTICIPATES IN insulin signaling pathway; insulin-like growth factor signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); FOUND IN protein-containing complex (ortholog) 11 80872579 80977917 - 30032202 116912889 MODEL JAAIVD010000006;XM_032917144;XM_032917145 XP_032773035;XP_032773036 growth factor receptor-bound protein 10 protein-coding 625835485 LOC116913810 mitochondrial pyruvate carrier 1-like 12 54095150 54095427 - 116913810 MODEL JAAIVD010000007 pseudo 625835486 Kcnmb3 potassium calcium-activated channel subfamily M regulatory beta subunit 3 ENCODES a protein that exhibits calcium-activated potassium channel activity (ortholog); INVOLVED IN action potential (ortholog); detection of calcium ion (ortholog); neuronal action potential (ortholog); FOUND IN plasma membrane (ortholog); voltage-gated potassium channel complex (ortholog) 3 122512979 122527781 + 22301074;30032202 116895553 MODEL JAAIVD010000012;XM_032896791 XP_032752682 calcium-activated potassium channel subunit beta-3 protein-coding 625835494 Des desmin ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN intermediate filament organization (ortholog); nuclear envelope organization (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); arrhythmogenic right ventricular dysplasia 9 (ortholog); FOUND IN cardiac myofibril (ortholog); cell tip (ortholog); cell-cell junction (ortholog) 4 148712814 148720404 + 22301074;30032202 116899532 MODEL JAAIVD010000003;XM_032901402;XM_032901403 XP_032757293;XP_032757294 protein-coding 625835512 Lrit1 leucine rich repeat, Ig-like and transmembrane domains 1 INVOLVED IN phototransduction (ortholog); response to light stimulus (ortholog); synaptic signaling (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); synapse (ortholog); synaptic cleft (ortholog) 13 15527133 15534818 + 22301074;30032202 116915047 MODEL JAAIVD010000008;XM_032919457 XP_032775348 leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1 protein-coding 625835520 LOC116908826 keratin-associated protein 4-2-like 9 54572449 54573082 - 22301074;30032202 116908826 MODEL JAAIVD010000002;XM_032912246 XP_032768137 protein-coding 625835524 LOC116895623 60S ribosomal protein L9-like 3 172215190 172216213 + 116895623 MODEL JAAIVD010000012 pseudo 625835525 LOC116913345 cysteine and histidine-rich protein 1-like 1 248971465 248984485 - 22301074;30032202 116913345 MODEL JAAIVD010000025;XM_032917501 XP_032773392 protein-coding 625835533 LOC116890124 olfactory receptor 8K3-like 1 242004918 242005859 - 22301074;30032202 116890124 MODEL JAAIVD010000025;XM_032890863 XP_032746754 protein-coding 625835536 Kcnma1 potassium calcium-activated channel subfamily M alpha 1 ENCODES a protein that exhibits actin binding (ortholog); calcium-activated potassium channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN adult walking behavior (ortholog); blood vessel diameter maintenance (ortholog); cell maturation (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN apical plasma membrane (ortholog); caveola (ortholog); cytoplasm (ortholog) 12 93034529 93729512 - 22301074;30032202 116913130 MODEL JAAIVD010000007;XM_032917294;XM_032917295;XM_032917296;XM_032917297;XM_032917298;XM_032917300;XM_032917301;XM_032917302;XM_032917303;XM_032917304;XM_032917305;XM_032917306;XM_032917307;XM_032917308;XM_032917309;XM_032917310;XM_032917311;XM_032917312;XM_032917313;XM_032917314;XM_032917316;XM_032917317;XM_032917318;XM_032917319;XM_032917320;XM_032917321;XM_032917322;XM_032917323;XM_032917324;XM_032917325;XM_032917326;XM_032917327;XM_032917328;XM_032917329;XM_032917330;XM_032917332;XM_032917333;XM_032917334;XM_032917335;XM_032917336 XP_032773185;XP_032773186;XP_032773187;XP_032773188;XP_032773189;XP_032773191;XP_032773192;XP_032773193;XP_032773194;XP_032773195;XP_032773196;XP_032773197;XP_032773198;XP_032773199;XP_032773200;XP_032773201;XP_032773202;XP_032773203;XP_032773204;XP_032773205;XP_032773207;XP_032773208;XP_032773209;XP_032773210;XP_032773211;XP_032773212;XP_032773213;XP_032773214;XP_032773215;XP_032773216;XP_032773217;XP_032773218;XP_032773219;XP_032773220;XP_032773221;XP_032773223;XP_032773224;XP_032773225;XP_032773226;XP_032773227 calcium-activated potassium channel subunit alpha-1 protein-coding 625835641 LOC116905081 lanosterol 14-alpha demethylase-like 7 72328823 72331002 - 22301074 116905081 MODEL JAAIVD010000026;XM_032907788 XP_032763679 protein-coding 625835646 Klf9 KLF transcription factor 9 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to cortisol stimulus (ortholog); cellular response to endothelin (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH Body Weight (ortholog); diastolic heart failure (ortholog); endometriosis (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 2 23203779 23227088 + 30032202 116891038 MODEL JAAIVD010000001;XM_032891720 XP_032747611 Krueppel-like factor 9;Kruppel like factor 9 protein-coding 625835652 Ntaq1 N-terminal glutamine amidase 1 ENCODES a protein that exhibits protein-N-terminal glutamine amidohydrolase activity (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 232689625 232741239 + 30032202 116911736 MODEL JAAIVD010000025;XM_032915720;XM_032915728;XM_032915737;XM_032915744;XM_032915751 XP_032771611;XP_032771619;XP_032771628;XP_032771635;XP_032771642 protein N-terminal glutamine amidohydrolase protein-coding 625835677 LOC116890425 U7 small nuclear RNA 1 242789080 242789139 + 116890425 MODEL JAAIVD010000025;XR_004386624 snrna 625835680 Pgm5 phosphoglucomutase 5 ENCODES a protein that exhibits phosphoglucomutase activity (ortholog); ASSOCIATED WITH systemic juvenile rheumatoid arthritis (ortholog); FOUND IN adherens junction (ortholog); cell-substrate junction (ortholog); costamere (ortholog) 2 24814901 24988742 - 22301074;30032202 116891051 MODEL JAAIVD010000001;XM_032891741 XP_032747632 phosphoglucomutase-like protein 5 protein-coding 625835695 Tpx2 TPX2 microtubule nucleation factor ENCODES a protein that exhibits importin-alpha family protein binding (ortholog); molecular adaptor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); microtubule nucleation (ortholog); mitotic spindle assembly (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN axon hillock (ortholog); intercellular bridge (ortholog); microtubule cytoskeleton (ortholog) 5 132171740 132212675 + 30032202 116902128 MODEL JAAIVD010000023;XM_032904452;XM_032904453;XM_032904454;XM_032904455 XP_032760343;XP_032760344;XP_032760345;XP_032760346 targeting protein for Xklp2 protein-coding 625835722 Galnt13 polypeptide N-acetylgalactosaminyltransferase 13 ENCODES a protein that exhibits polypeptide N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation (ortholog); protein O-linked glycosylation via N-acetyl-galactosamine (ortholog); ASSOCIATED WITH Hepatomegaly (ortholog); Zimmermann-Laband Syndrome 3 (ortholog) 5 32046156 32675481 + 30032202 116901418 MODEL JAAIVD010000023;XM_032903304 XP_032759195 protein-coding 625835739 LOC116906689 peroxisomal multifunctional enzyme type 2-like 8 234357 236586 + 116906689 MODEL JAAIVD010000027;XM_032909480 XP_032765371 protein-coding 625835744 Cdsn corneodesmosin ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN amyloid fibril formation (ortholog); cell-cell adhesion (ortholog); corneocyte desquamation (ortholog); ASSOCIATED WITH alopecia (ortholog); atopic dermatitis (ortholog); hypotrichosis 2 (ortholog); FOUND IN cornified envelope (ortholog); desmosome (ortholog); extracellular region (ortholog) 18 8759327 8763527 + 30032202 116887457 MODEL JAAIVD010000013;XM_032889065 XP_032744956 protein-coding 625835749 Znf335 zinc finger protein 335 ENCODES a protein that exhibits transcription cis-regulatory region binding (ortholog); INVOLVED IN brain development (ortholog); epigenetic regulation of gene expression (ortholog); neuron projection morphogenesis (ortholog); ASSOCIATED WITH Aminoacylase 1 Deficiency (ortholog); autistic disorder (ortholog); autosomal recessive primary microcephaly (ortholog); FOUND IN histone methyltransferase complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 5 153047499 153067755 + 30032202 116902340 MODEL JAAIVD010000023;XM_032904818;XM_032904819;XM_032904820;XM_032904821;XM_032904822 XP_032760709;XP_032760710;XP_032760711;XP_032760712;XP_032760713 protein-coding 625835794 Tmc1 transmembrane channel like 1 ENCODES a protein that exhibits calcium channel activity (ortholog); mechanosensitive monoatomic ion channel activity (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN auditory receptor cell development (ortholog); calcium ion transmembrane transport (ortholog); detection of mechanical stimulus involved in sensory perception of sound (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 36 (ortholog); autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 7 (ortholog); FOUND IN external side of plasma membrane (ortholog); stereocilium (ortholog); stereocilium tip (ortholog) 2 20883240 21046161 - 30032202 116891026 MODEL JAAIVD010000001;XM_032891708 XP_032747599 transmembrane channel-like protein 1 protein-coding 625835818 LOC116895116 small nucleolar RNA U3 2 127754421 127754635 - 116895116 MODEL JAAIVD010000001;XR_004387264 snorna 625835821 Amtn amelotin INVOLVED IN amelogenesis (ortholog); enamel mineralization (ortholog); odontogenesis of dentin-containing tooth (ortholog); ASSOCIATED WITH amelogenesis imperfecta type 3A (ortholog); amelogenesis imperfecta type 3B (ortholog); FOUND IN basement membrane (ortholog); cell-cell junction (ortholog); extracellular matrix (ortholog) 11 1898640 1911219 + 22301074;30032202 116912662 MODEL JAAIVD010000006;XM_032916781 XP_032772672 protein-coding 625835834 LOC116893108 neuromedin-U receptor 1-like 2 67703507 67704725 - 116893108 MODEL JAAIVD010000001 pseudo 625835835 LOC116904388 small nuclear ribonucleoprotein-associated protein B-like 6 93340383 93343268 + 116904388 MODEL JAAIVD010000024 pseudo 625835836 LOC116911144 thrombospondin type-1 domain-containing protein 7B-like 10 6610488 6624474 - 116911144 MODEL JAAIVD010000005;XM_032914997 XP_032770888 protein-coding 625835843 LOC116896101 transcription elongation factor A protein-like 3 3 223219902 223255832 - 116896101 MODEL JAAIVD010000012;XR_004387309 pseudo 625835847 Nps neuropeptide S ENCODES a protein that exhibits neuropeptide activity (ortholog); INVOLVED IN phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); positive regulation of action potential (ortholog); positive regulation of cAMP/PKA signal transduction (ortholog); ASSOCIATED WITH Alcoholic Intoxication (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN extracellular region (ortholog) 2 66643442 66648389 - 22301074;30032202 116893107 MODEL JAAIVD010000001;XM_032895046 XP_032750937 protein-coding 625835853 Smap2 small ArfGAP2 FOUND IN cytosol (ortholog) 1 36004900 36052079 + 22301074;30032202 116897232 MODEL JAAIVD010000025;XM_032898959 XP_032754850 stromal membrane-associated protein 2 protein-coding 625835867 LOC116904489 neuroepithelial cell-transforming gene 1 protein-like 6 150408031 150408709 + 116904489 MODEL JAAIVD010000024 pseudo 625835868 LOC116907802 olfactory receptor 1174-like 8 16266175 16267170 + 22301074;30032202 116907802 MODEL JAAIVD010000027;XM_032910947 XP_032766838 protein-coding 625835871 LOC116883949 actin-related protein 2/3 complex subunit 5-like 14 17721000 17729976 - 116883949 MODEL JAAIVD010000009 pseudo 625835872 Pole DNA polymerase epsilon, catalytic subunit ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-directed DNA polymerase activity (ortholog); INVOLVED IN base-excision repair, gap-filling (ortholog); DNA biosynthetic process (ortholog); DNA replication (ortholog); PARTICIPATES IN nucleotide excision repair pathway; ASSOCIATED WITH ascending colon cancer (ortholog); astroblastoma (ortholog); breast cancer (ortholog); FOUND IN epsilon DNA polymerase complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 16 44023944 44072437 - 22301074;30032202 116885592 MODEL JAAIVD010000004;XM_032886896 XP_032742787 DNA polymerase epsilon catalytic subunit A protein-coding 625835925 Micall2 MICAL like 2 ENCODES a protein that exhibits actin filament binding (ortholog); actinin binding (ortholog); filamin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament polymerization (ortholog); bicellular tight junction assembly (ortholog); ASSOCIATED WITH Joubert syndrome 1 (ortholog); FOUND IN actin filament bundle (ortholog); bicellular tight junction (ortholog); cell-cell junction (ortholog) 16 13453953 13482780 + 22301074 116885633 MODEL JAAIVD010000004;XM_032886937 XP_032742828 MICAL-like protein 2 protein-coding 625835946 LOC116907187 40S ribosomal protein S6-like 8 10963900 10964674 + 22301074;30032202 116907187 MODEL JAAIVD010000027;XM_032910148 XP_032766039 protein-coding 625835950 LOC116909605 olfactory receptor 2T4-like 9 39687405 39688352 + 22301074 116909605 MODEL JAAIVD010000002;XM_032913227 XP_032769118 protein-coding 625835953 Pnpla8 patatin like domain 8, phospholipase A2 ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); obsolete calcium-independent phospholipase A2 activity (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); arachidonate secretion (ortholog); cardiolipin metabolic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); Mitochondrial Myopathy with Lactic Acidosis (ortholog); FOUND IN membrane (ortholog); mitochondrion (ortholog); peroxisomal membrane (ortholog) 7 57906912 57969205 + 30032202 116905007 MODEL JAAIVD010000026;XM_032907691 XP_032763582 calcium-independent phospholipase A2-gamma;patatin like phospholipase domain containing 8 protein-coding 625835967 LOC116900642 proteasome subunit beta type-3-like 5 111168866 111169574 - 22301074 116900642 MODEL JAAIVD010000023;XM_032902352 XP_032758243 protein-coding 625835971 LOC116910135 60S acidic ribosomal protein P0-like 9 17020537 17021554 + 116910135 MODEL JAAIVD010000002 pseudo 625835972 Usf2 upstream transcription factor 2, c-fos interacting ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); glucose mediated signaling pathway (ortholog); lactation (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 2 165082555 165093652 + 22301074;30032202 116892296 MODEL JAAIVD010000001;XM_032893905 XP_032749796 upstream stimulatory factor 2 protein-coding 625835986 Rbpj recombination signal binding protein for immunoglobulin kappa J region ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN angiogenesis (ortholog); aortic valve development (ortholog); arterial endothelial cell fate commitment (ortholog); PARTICIPATES IN Notch signaling pathway; Notch signaling pathway; Notch signaling pathway; ASSOCIATED WITH Adams-Oliver syndrome (ortholog); Adams-Oliver syndrome 3 (ortholog); aortic valve disease (ortholog); FOUND IN cytoplasm (ortholog); MAML1-RBP-Jkappa- ICN1 complex (ortholog); nucleolus (ortholog) 11 52493689 52556515 - 22301074;30032202 116912084 MODEL JAAIVD010000006;XM_032915963;XM_032915964;XM_032915965;XM_032915966 XP_032771854;XP_032771855;XP_032771856;XP_032771857 recombining binding protein suppressor of hairless protein-coding 625836011 LOC116897068 ubiquitin-conjugating enzyme E2 L3-like 3 154868645 154869541 - 116897068 MODEL JAAIVD010000012;XM_032898692 XP_032754583 protein-coding 625836016 LOC116913916 DNA replication complex GINS protein SLD5-like 12 27756144 27756664 - 116913916 MODEL JAAIVD010000007 pseudo 625836017 LOC116887912 alpha- and gamma-adaptin-binding protein p34-like X 54661025 54662255 - 116887912 MODEL JAAIVD010000014 pseudo 625836018 Lrp3 LDL receptor related protein 3 INVOLVED IN negative regulation of fat cell differentiation (ortholog); negative regulation of gene expression (ortholog); positive regulation of gene expression (ortholog) 2 163464780 163477677 + 22301074;30032202 116892272 MODEL JAAIVD010000001;XM_032893862 XP_032749753 low-density lipoprotein receptor-related protein 3 protein-coding 625836029 Ctbp2 C-terminal binding protein 2 ENCODES a protein that exhibits chromatin binding (ortholog); identical protein binding (ortholog); nuclear retinoic acid receptor binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); negative regulation of DNA-templated transcription (ortholog); positive regulation of retinoic acid receptor signaling pathway (ortholog); ASSOCIATED WITH Neoplasm Invasiveness (ortholog); Neoplastic Cell Transformation (ortholog); Prostatic Neoplasms (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); nucleus (ortholog) 2 68830118 68859382 + 22301074 116891389 MODEL JAAIVD010000001;XM_032892407 XP_032748298 C-terminal-binding protein 2 protein-coding 625836041 Ccn1 cellular communication network factor 1 ENCODES a protein that exhibits extracellular matrix binding (ortholog); integrin binding (ortholog); INVOLVED IN apoptotic process involved in heart morphogenesis (ortholog); atrial septum morphogenesis (ortholog); atrioventricular valve morphogenesis (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Acute Heart Injury (ortholog); acute myocardial infarction (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) 3 15225394 15228374 + 22301074 116896180 MODEL JAAIVD010000012;XM_032897219 XP_032753110 CCN family member 1 protein-coding 625836050 LOC116888067 vacuolar ATPase assembly integral membrane protein VMA21-like X 88866595 88868190 - 116888067 MODEL JAAIVD010000014 pseudo 625836051 LOC116887843 uncharacterized LOC116887843 X 40130532 40135850 - 116887843 MODEL JAAIVD010000014 pseudo 625836052 Dapk3 death associated protein kinase 3 ENCODES a protein that exhibits ATP binding (ortholog); DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); cellular response to type II interferon (ortholog); FOUND IN actin filament (ortholog); chromosome, centromeric region (ortholog); cytosol (ortholog) 1 153697736 153705155 - 22301074;30032202 116904526 MODEL JAAIVD010000025;XM_032907320;XM_032907327 XP_032763211;XP_032763218 death-associated protein kinase 3 protein-coding 625836067 LOC116899920 U1 spliceosomal RNA 4 53069801 53069961 + 116899920 MODEL JAAIVD010000003;XR_004387891 snrna 625836070 LOC116887625 olfactory receptor 12D2-like 18 10346401 10348755 + 22301074 116887625 MODEL JAAIVD010000013;XM_032889227 XP_032745118 protein-coding 625836075 LOC116898390 serine/Arginine-related protein 53-like 4 74438522 74515561 + 116898390 MODEL JAAIVD010000003 pseudo 625836076 LOC116909054 ATP synthase subunit g, mitochondrial-like 9 55608496 55609259 + 116909054 MODEL JAAIVD010000002 pseudo 625836077 Trnas-gcu transfer RNA serine (anticodon GCU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 48657160 48657241 - 116910836 MODEL JAAIVD010000002 trna 625836078 Nnat neuronatin INVOLVED IN neuron differentiation (ortholog); positive regulation of insulin secretion (ortholog); regulation of protein localization (ortholog); ASSOCIATED WITH lung non-small cell carcinoma (ortholog); neuroblastoma (ortholog); FOUND IN cytoplasm (ortholog) 5 136903575 136906038 + 30032202 116902228 MODEL JAAIVD010000023;XM_032904633;XM_032904634;XM_032904635;XM_032904636 XP_032760524;XP_032760525;XP_032760526;XP_032760527 protein-coding 625836095 LOC116897911 uncharacterized LOC116897911 4 36262712 36263916 - 116897911 MODEL JAAIVD010000003;XR_004387629 ncrna 625836099 Ctnna3 catenin alpha 3 ENCODES a protein that exhibits beta-catenin binding (ortholog); INVOLVED IN bundle of His cell-Purkinje myocyte adhesion involved in cell communication (ortholog); cell-cell adhesion (ortholog); regulation of heart rate by cardiac conduction (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular dysplasia 13 (ortholog); asthma (ortholog); childhood-onset asthma (ortholog); FOUND IN adherens junction (ortholog); fascia adherens (ortholog); lamellipodium (ortholog) 18 21725648 23220892 - 22301074;30032202 116886938 MODEL JAAIVD010000013;XM_032888434 XP_032744325 catenin alpha-3 protein-coding 625836121 Trnae-uuc transfer RNA glutamic acid (anticodon UUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 12 44858752 44858823 - 116914206 MODEL JAAIVD010000007 trna 625836122 LOC116913731 olfactory receptor 11H4-like 12 72618941 72619915 + 22301074 116913731 MODEL JAAIVD010000007;XM_032918036 XP_032773927 protein-coding 625836125 LOC116909294 olfactory receptor 1361-like 9 38403356 38404297 + 22301074;30032202 116909294 MODEL JAAIVD010000002;XM_032912833 XP_032768724 protein-coding 625836128 Meis2 Meis homeobox 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN eye development (ortholog); negative regulation of myeloid cell differentiation (ortholog); pancreas development (ortholog); ASSOCIATED WITH brain infarction (ortholog); Calcification of Aortic Valve (ortholog); cleft palate (ortholog); FOUND IN nucleus (ortholog) 5 94073904 94277146 - 30032202 116901766 MODEL JAAIVD010000023;XM_032903903;XM_032903904;XM_032903905;XM_032903906;XM_032903907;XM_032903908 XP_032759794;XP_032759795;XP_032759796;XP_032759797;XP_032759798;XP_032759799 homeobox protein Meis2 protein-coding 625836159 Begain brain enriched guanylate kinase associated INVOLVED IN evoked excitatory postsynaptic potential (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); papillary thyroid carcinoma (ortholog); FOUND IN dendrite (ortholog); glutamatergic synapse (ortholog); neuronal cell body (ortholog) 7 126715140 126750174 - 30032202 116905461 MODEL JAAIVD010000026;XM_032908418;XM_032908419;XM_032908420;XM_032908422 XP_032764309;XP_032764310;XP_032764311;XP_032764313 brain-enriched guanylate kinase-associated protein protein-coding 625836180 LOC116900539 olfactory receptor 4F15-like 5 89623635 89624573 + 22301074 116900539 MODEL JAAIVD010000023;XM_032902266 XP_032758157 protein-coding 625836183 Wfdc2 WAP four-disulfide core domain 2 ENCODES a protein that exhibits aspartic-type endopeptidase inhibitor activity (ortholog); serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN lung vasculature development (ortholog); positive regulation of lung alveolus development (ortholog); ASSOCIATED WITH Bronchiectasis and Nasal Polyposis (ortholog); Experimental Liver Cirrhosis (ortholog) 5 153403246 153409212 - 22301074;30032202 116902356 MODEL JAAIVD010000023;XM_032904844 XP_032760735 WAP four-disulfide core domain protein 2 protein-coding 625836192 LOC116904545 uncharacterized protein DDB_G0290685-like 6 16737436 16779561 - 116904545 MODEL JAAIVD010000024;XM_032907339 XP_032763230 protein-coding 625836202 Tafazzin tafazzin, phospholipid-lysophospholipid transacylase ENCODES a protein that exhibits 1-acylglycerophosphocholine O-acyltransferase activity (ortholog); INVOLVED IN cardiolipin acyl-chain remodeling (ortholog); cardiolipin metabolic process (ortholog); cristae formation (ortholog); PARTICIPATES IN cardiolipin metabolic pathway; ASSOCIATED WITH autistic disorder (ortholog); Barth syndrome (ortholog); cardiomyopathy (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) X 128285410 128293938 + 30032202 116888439 MODEL JAAIVD010000014;XM_032889713;XM_032889714;XM_032889715 XP_032745604;XP_032745605;XP_032745606 Taz protein-coding 625836223 Cldn4 claudin 4 INVOLVED IN circadian rhythm (ortholog); establishment of skin barrier (ortholog); female pregnancy (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); invasive ductal carcinoma (ortholog); malignant mesothelioma (ortholog); FOUND IN apical plasma membrane (ortholog); apicolateral plasma membrane (ortholog); basal plasma membrane (ortholog) 16 19099054 19101031 + 22301074;30032202 116885740 MODEL JAAIVD010000004;XM_032887047 XP_032742938 claudin-4 protein-coding 625836228 LOC116906495 U1 spliceosomal RNA 7 107002625 107002780 - 116906495 MODEL JAAIVD010000026;XR_004388736 snrna 625836231 Kcnq2 potassium voltage-gated channel subfamily Q member 2 ENCODES a protein that exhibits ankyrin binding (ortholog); calmodulin binding (ortholog); potassium channel activity (ortholog); INVOLVED IN action potential (ortholog); action potential initiation (ortholog); apoptosome assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); autosomal dominant nocturnal frontal lobe epilepsy (ortholog); FOUND IN axon initial segment (ortholog); cell surface (ortholog); node of Ranvier (ortholog) 5 158187800 158240745 - 22301074;30032202 116902429 MODEL JAAIVD010000023;XM_032904960;XM_032904961;XM_032904962;XM_032904963;XR_004388071 XP_032760851;XP_032760852;XP_032760853;XP_032760854 potassium voltage-gated channel subfamily KQT member 2 protein-coding 625836262 LOC116910018 olfactory receptor 2A12-like 1 38024755 38025696 + 22301074 116910018 MODEL JAAIVD010000025;XM_032914162 XP_032770053 protein-coding 625836265 Ndufa10 NADH:ubiquinone oxidoreductase subunit A10 ENCODES a protein that exhibits NADH dehydrogenase (ubiquinone) activity (ortholog); INVOLVED IN mitochondrial electron transport, NADH to ubiquinone (ortholog); response to xenobiotic stimulus (ortholog); ASSOCIATED WITH genetic disease (ortholog); Leigh disease (ortholog); mitochondrial complex I deficiency (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) 4 164404750 164440467 - 22301074;30032202 116899645 MODEL JAAIVD010000003;XM_032901654 XP_032757545 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial protein-coding 625836279 LOC116913980 60S ribosomal protein L35a-like 1 251219471 251219843 + 22301074;30032202 116913980 MODEL JAAIVD010000025;XM_032918258 XP_032774149 protein-coding 625836284 LOC116894419 keratin-associated protein 6-3-like 2 158754721 158754945 - 116894419 MODEL JAAIVD010000001;XM_032896124 XP_032752015 protein-coding 625836287 LOC116911296 ankyrin repeat domain-containing protein 49-like 10 12399479 12400478 - 116911296 MODEL JAAIVD010000005 pseudo 625836288 LOC116898319 caprin-1-like 4 40514861 40551840 + 116898319 MODEL JAAIVD010000003 pseudo 625836289 Dpp9 dipeptidyl peptidase 9 ENCODES a protein that exhibits dipeptidyl-peptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of programmed cell death (ortholog); pyroptotic inflammatory response (ortholog); ASSOCIATED WITH idiopathic pulmonary fibrosis (ortholog); Immunodeficiency 111 (ortholog); FOUND IN cell leading edge (ortholog); cytosol (ortholog); microtubule (ortholog) 4 87571389 87605686 - 22301074;30032202 116899172 MODEL JAAIVD010000003;XM_032900741;XM_032900742;XM_032900743 XP_032756632;XP_032756633;XP_032756634 protein-coding 625836323 Gnas GNAS complex locus ENCODES a protein that exhibits adenylate cyclase activator activity (ortholog); alkylglycerophosphoethanolamine phosphodiesterase activity (ortholog); alpha-tubulin binding (ortholog); INVOLVED IN adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); adenylate cyclase-activating dopamine receptor signaling pathway (ortholog); adenylate cyclase-activating G protein-coupled bile acid receptor signaling pathway (ortholog); PARTICIPATES IN adenosine signaling pathway; corticotropin-releasing hormone signaling pathway; dopamine signaling pathway via D1 family of receptors; ASSOCIATED WITH acromegaly (ortholog); ACTH-independent macronodular adrenal hyperplasia (ortholog); ACTH-independent macronodular adrenal hyperplasia 1 (ortholog); FOUND IN COPI-coated Golgi to ER transport vesicle (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) 5 143634838 143686469 - 22301074;30032202 116902268 MODEL JAAIVD010000023;XM_032904688;XM_032904689;XM_032904690;XM_032904691;XM_032904692;XM_032904693;XM_032904695;XM_032904696;XM_032904697 XP_032760579;XP_032760580;XP_032760581;XP_032760582;XP_032760583;XP_032760584;XP_032760586;XP_032760587;XP_032760588 guanine nucleotide-binding protein G(s) subunit alpha;guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas protein-coding 625836358 LOC116888984 60S ribosomal protein L19-like X 12263777 12264931 + 116888984 MODEL JAAIVD010000014 pseudo 625836359 Ufm1 ubiquitin fold modifier 1 INVOLVED IN brain development (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of protein import into nucleus (ortholog); ASSOCIATED WITH hypomyelinating leukodystrophy 14 (ortholog); long QT syndrome (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); nucleus (ortholog) 3 100546930 100555226 + 30032202 116896876 MODEL JAAIVD010000012;XM_032898422 XP_032754313 ubiquitin-fold modifier 1 protein-coding 625836369 Tram2 translocation associated membrane protein 2 INVOLVED IN collagen biosynthetic process (ortholog); protein insertion into ER membrane (ortholog) 4 98374997 98448263 - 22301074;30032202 116898106 MODEL JAAIVD010000003;XM_032899491 XP_032755382 translocating chain-associated membrane protein 2 protein-coding 625836384 LOC116910300 60S ribosomal protein L30-like 9 48504012 48506649 + 116910300 MODEL JAAIVD010000002 pseudo 625836385 LOC116912922 60S ribosomal protein L15-like 1 175485753 175488538 + 116912922 MODEL JAAIVD010000025 pseudo 625836386 LOC116898595 60S ribosomal protein L24-like 4 178490978 178492227 + 116898595 MODEL JAAIVD010000003 pseudo 625836387 Cep250 centrosomal protein 250 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN centriole-centriole cohesion (ortholog); cilium assembly (ortholog); detection of light stimulus involved in visual perception (ortholog); ASSOCIATED WITH Cone-Rod Dystrophy and Hearing Loss 2 (ortholog); fundus dystrophy (ortholog); optic atrophy (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 5 135315738 135360876 + 30032202 116902181 MODEL JAAIVD010000023;XM_032904538;XM_032904539;XM_032904541;XM_032904542;XM_032904543;XM_032904544 XP_032760429;XP_032760430;XP_032760432;XP_032760433;XP_032760434;XP_032760435 centrosome-associated protein CEP250 protein-coding 625836441 LOC116903172 uncharacterized LOC116903172 6 14735148 14736063 - 116903172 MODEL JAAIVD010000024;XR_004388257 ncrna 625836445 Mllt3 MLLT3 super elongation complex subunit ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); histone H3K18ac reader activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); gene expression (ortholog); hematopoietic stem cell differentiation (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH Diabetic Nephropathies (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription elongation factor complex (ortholog) 1 66061261 66316355 + 22301074;30032202 116900423 MODEL JAAIVD010000025;XM_032902169;XM_032902174 XP_032758060;XP_032758065 protein AF-9 protein-coding 625836463 LOC116890547 small nucleolar RNA SNORA17 1 176929123 176929267 - 116890547 MODEL JAAIVD010000025 pseudo 625836464 LOC116904442 60S ribosomal protein L21-like 6 122752425 122752943 + 116904442 MODEL JAAIVD010000024 pseudo 625836465 Psmb10 proteasome 20S subunit beta 10 INVOLVED IN cell morphogenesis (ortholog); T cell proliferation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); human immunodeficiency virus infectious disease (ortholog); immunodeficiency 121 (ortholog); FOUND IN proteasome core complex (ortholog); spermatoproteasome complex (ortholog) 17 25676071 25678622 - 22301074 116886397 MODEL JAAIVD010000011;XM_032887866 XP_032743757 proteasome subunit beta type-10 protein-coding 625836477 Myo1b myosin IB ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); ATP binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); actin filament organization (ortholog); actin filament-based movement (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); Hepatomegaly (ortholog); Weight Gain (ortholog); FOUND IN actin filament (ortholog); apical part of cell (ortholog); brush border (ortholog) 4 123529900 123694861 + 22301074;30032202 116899375 MODEL JAAIVD010000003;XM_032901091 XP_032756982 unconventional myosin-Ib protein-coding 625836512 C9H16orf91 chromosome 9 C16orf91 homolog INVOLVED IN mitochondrial respiratory chain complex III assembly (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 9 2440932 2452159 + 116909138 MODEL JAAIVD010000002;XM_032912625 XP_032768516 protein CCSMST1 protein-coding 625836517 Cabp2 calcium binding protein 2 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); INVOLVED IN sensory perception of sound (ortholog); visual perception (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 93 (ortholog); FOUND IN Golgi apparatus (ortholog); plasma membrane (ortholog) 2 3555308 3561059 - 22301074 116893600 MODEL JAAIVD010000001;XM_032895302;XM_032895303;XM_032895304;XM_032895305 XP_032751193;XP_032751194;XP_032751195;XP_032751196 calcium-binding protein 2 protein-coding 625836536 C17H16orf46 chromosome 17 C16orf46 homolog 17 36606008 36616458 - 116886096 MODEL JAAIVD010000011;XM_032887421 XP_032743312 uncharacterized protein C16orf46 homolog protein-coding 625836543 Alg1 ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase ENCODES a protein that exhibits chitobiosyldiphosphodolichol beta-mannosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH brain disease (ortholog); congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation Ig (ortholog) 9 16671174 16681330 - 30032202 116909224 MODEL JAAIVD010000002;XM_032912725 XP_032768616 chitobiosyldiphosphodolichol beta-mannosyltransferase protein-coding 625836560 LOC116903304 C-type lectin domain family 4 member A-like 6 24134930 24145126 - 116903304 MODEL JAAIVD010000024;XM_032905730 XP_032761621 protein-coding 625836570 Znf622 zinc finger protein 622 ENCODES a protein that exhibits preribosome binding (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway in response to oxidative stress (ortholog); positive regulation of apoptotic process (ortholog); positive regulation of JNK cascade (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 3 154817443 154828973 - 22301074;30032202 116897065 MODEL JAAIVD010000012;XM_032898690 XP_032754581 protein-coding 625836580 Gimap1 GTPase, IMAP family member 1 ENCODES a protein that exhibits GTP binding (ortholog); INVOLVED IN B cell differentiation (ortholog); T cell differentiation (ortholog); FOUND IN endoplasmic reticulum (ortholog) 6 92230460 92234546 - 22301074;30032202 116903847 MODEL JAAIVD010000024;XM_032906578;XM_032906579 XP_032762469;XP_032762470 GTPase IMAP family member 1 protein-coding 625836591 LOC116901695 UPF0606 protein KIAA1549L-like 5 82081475 82324361 - 116901695 MODEL JAAIVD010000023;XM_032903824 XP_032759715 protein-coding 625836612 LOC116912955 small nucleolar RNA SNORA36 family 11 15245642 15245773 + 116912955 MODEL JAAIVD010000006;XR_004389522 snorna 625836615 LOC116903792 endogenous retrovirus group K member 6 Gag polyprotein-like 6 17471745 17480159 - 22301074 116903792 MODEL JAAIVD010000024;XM_032906485 XP_032762376 protein-coding 625836619 LOC116892878 nesprin-1 2 197461723 197565342 + 22301074 116892878 MODEL JAAIVD010000001;XM_032894788 XP_032750679 protein-coding 625836670 Cd28 CD28 molecule ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase binding (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); negative regulation of gene expression (ortholog); negative thymic T cell selection (ortholog); ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); asthma (ortholog); autoimmune disease (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); immunological synapse (ortholog) 4 134828884 134854658 + 22301074;30032202 116898191 MODEL JAAIVD010000003;XM_032899554 XP_032755445 T-cell-specific surface glycoprotein CD28 protein-coding 625836678 Tmem79 transmembrane protein 79 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cornification (ortholog); cuticle development (ortholog); epithelial cell maturation (ortholog); ASSOCIATED WITH atopic dermatitis (ortholog); Charcot-Marie-Tooth disease type 2 (ortholog); FOUND IN cytoplasm (ortholog); lysosomal membrane (ortholog); trans-Golgi network membrane (ortholog) 3 65217943 65222759 + 30032202 116896693 MODEL JAAIVD010000012;XM_032898085;XM_032898087;XM_032898088;XM_032898089;XM_032898090;XM_032898091;XM_032898092 XP_032753976;XP_032753978;XP_032753979;XP_032753980;XP_032753981;XP_032753982;XP_032753983 protein-coding 625836699 Efcab12 EF-hand calcium binding domain 12 ASSOCIATED WITH autistic disorder (ortholog) 6 30886216 30902215 + 22301074 116904632 MODEL JAAIVD010000024;XM_032907424 XP_032763315 EF-hand calcium-binding domain-containing protein 12 protein-coding 625836711 LOC116890976 uncharacterized LOC116890976 2 10529244 10530183 - 116890976 MODEL JAAIVD010000001;XR_004386802 ncrna 625836715 LOC116912689 protein MEMO1 11 28349926 28351428 - 116912689 MODEL JAAIVD010000006;XM_032916824;XM_032916825 XP_032772715;XP_032772716 protein-coding 625836724 Sash1 SAM and SH3 domain containing 1 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN positive regulation of angiogenesis (ortholog); positive regulation of endothelial cell migration (ortholog); positive regulation of JUN kinase activity (ortholog); ASSOCIATED WITH Cancer, Alopecia, Pigment Dyscrasia, Onychodystrophy, and Keratoderma (ortholog); developmental and epileptic encephalopathy 13 (ortholog); Dyschromatosis Universalis Hereditaria 1 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) 2 228217023 228382492 + 22301074 116893030 MODEL JAAIVD010000001;XM_032894991;XM_032894993 XP_032750882;XP_032750884 SAM and SH3 domain-containing protein 1 protein-coding 625836751 Ubl3 ubiquitin like 3 16 5296113 5342537 + 22301074 116885133 MODEL JAAIVD010000004;XM_032886308 XP_032742199 ubiquitin-like protein 3 protein-coding 625836760 LOC116887879 glucocorticoid modulatory element-binding protein 1-like X 49008573 49009688 + 116887879 MODEL JAAIVD010000014 pseudo 625836761 LOC116904252 28S ribosomal protein S21, mitochondrial-like 6 28878701 28884686 + 116904252 MODEL JAAIVD010000024 pseudo 625836762 Psen1 presenilin 1 ENCODES a protein that exhibits aspartic endopeptidase activity, intramembrane cleaving (ortholog); aspartic-type endopeptidase activity (ortholog); ATPase binding (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); amyloid precursor protein metabolic process (ortholog); amyloid-beta formation (ortholog); PARTICIPATES IN Notch signaling pathway; Notch signaling pathway; syndecan signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Alzheimer's disease 3 (ortholog); Alzheimer's disease 4 (ortholog); FOUND IN aggresome (ortholog); axon (ortholog); cell cortex (ortholog) 7 97779759 97829705 + 22301074;30032202 116905252 MODEL JAAIVD010000026;XM_032908099 XP_032763990 presenilin-1 protein-coding 625836778 LOC116910032 spermatid-specific linker histone H1-like protein ENCODES a protein that exhibits DNA binding (inferred); INVOLVED IN cell differentiation (inferred); chromatin organization (inferred); chromosome condensation (inferred); FOUND IN nucleosome (inferred) 9 59414275 59415065 - 22301074 116910032 I6TS27 MODEL JAAIVD010000002;JQ914269;XM_032913818 AFM97411;XP_032769709 Hils1 histone H1-like protein in spermatids 1 protein-coding 625836783 Cdca4 cell division cycle associated 4 FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 7 130416073 130425272 - 30032202 116905522 MODEL JAAIVD010000026;XM_032908544;XM_032908545 XP_032764435;XP_032764436 cell division cycle-associated protein 4 protein-coding 625836792 Ndc80 NDC80 kinetochore complex component ENCODES a protein that exhibits cyclin binding (ortholog); identical protein binding (ortholog); kinetochore adaptor activity (ortholog); INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); attachment of spindle microtubules to kinetochore (ortholog); centrosome duplication (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); kinetochore (ortholog) 4 180953010 180984404 - 22301074;30032202 116899720 MODEL JAAIVD010000003;XM_032901760 XP_032757651 kinetochore protein NDC80 homolog protein-coding 625836813 Stk10 serine/threonine kinase 10 ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN lymphocyte aggregation (ortholog); protein autophosphorylation (ortholog); regulation of lymphocyte migration (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN plasma membrane (ortholog) 9 5377827 5466280 + 22301074 116909278 MODEL JAAIVD010000002;XM_032912813 XP_032768704 serine/threonine-protein kinase 10 protein-coding 625836836 Fcgrt Fc gamma receptor and transporter ENCODES a protein that exhibits beta-2-microglobulin binding (ortholog); IgG binding (ortholog); peptide antigen binding (ortholog) 2 154443009 154452871 + 2911353;30032202 116892170 MODEL JAAIVD010000001;X14323;XM_032893675;XM_032893676 CAA32503;XP_032749566;XP_032749567 Fc fragment of IgG receptor and transporter;IgG receptor FcRn large subunit p51;precursor polypetide (AA -22 to 344) protein-coding 625836850 LOC116890374 U6 spliceosomal RNA 1 36109341 36109441 - 116890374 MODEL JAAIVD010000025 pseudo 625836851 LOC116890505 small nucleolar RNA SNORA48 1 229192404 229192546 - 116890505 MODEL JAAIVD010000025;XR_004386690 snorna 625836854 LOC116888053 ras-related protein Rab-18-like X 87724266 87727148 - 116888053 MODEL JAAIVD010000014 pseudo 625836855 LOC116897606 small nucleolar RNA SNORA17 3 196907611 196907724 + 116897606 MODEL JAAIVD010000012 pseudo 625836856 Il6r interleukin 6 receptor ENCODES a protein that exhibits ciliary neurotrophic factor binding (ortholog); ciliary neurotrophic factor receptor activity (ortholog); cytokine receptor activity (ortholog); INVOLVED IN autocrine signaling (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); cell surface receptor signaling pathway via STAT (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; ASSOCIATED WITH Acute-Phase Reaction (ortholog); Alzheimer's disease (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); ciliary neurotrophic factor receptor complex (ortholog) 3 63738759 63787388 + 22301074;30032202 116896631 MODEL JAAIVD010000012;XM_032897940;XM_032897941 XP_032753831;XP_032753832 interleukin-6 receptor subunit alpha protein-coding 625836872 Cd244 CD244 molecule ENCODES a protein that exhibits MHC class I protein binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN myeloid dendritic cell activation (ortholog); natural killer cell activation (ortholog); natural killer cell activation involved in immune response (ortholog); ASSOCIATED WITH prostate cancer (ortholog); rheumatoid arthritis (ortholog); FOUND IN external side of plasma membrane (ortholog); membrane raft (ortholog) 10 50732147 50753627 + 30032202 116911543 MODEL JAAIVD010000005;XM_032915532 XP_032771423 natural killer cell receptor 2B4 protein-coding 625836885 Tasor2 transcription activation suppressor family member 2 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN negative regulation of gene expression, epigenetic (ortholog); negative regulation of type I interferon production (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); HUSH2 complex (ortholog) 14 17917910 17967365 - 30032202 116883825 MODEL JAAIVD010000009;XM_032885079;XM_032885080;XM_032885081 XP_032740970;XP_032740971;XP_032740972 protein TASOR 2 protein-coding 625836917 LOC116902992 RNA-binding protein EWS-like 6 138605369 138607325 - 116902992 MODEL JAAIVD010000024 pseudo 625836918 LOC116911003 uncharacterized LOC116911003 10 18262260 18295713 + 116911003 MODEL JAAIVD010000005;XR_004389295 ncrna 625836923 Adam10 ADAM metallopeptidase domain 10 ENCODES a protein that exhibits endopeptidase activity (ortholog); metallodipeptidase activity (ortholog); metalloendopeptidase activity (ortholog); INVOLVED IN adherens junction organization (ortholog); amyloid precursor protein catabolic process (ortholog); amyloid-beta formation (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; interleukin-6 signaling pathway; Notch signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Alzheimer's disease 18 (ortholog); Breast Neoplasms (ortholog); FOUND IN cell surface (ortholog); dendrite (ortholog); dendritic spine (ortholog) 8 65020269 65132222 + 30032202 116907958 MODEL JAAIVD010000027;XM_032911186 XP_032767077 disintegrin and metalloproteinase domain-containing protein 10 protein-coding 625836943 LOC116909448 NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial 9 4550054 4550588 + 22301074;30032202 116909448 MODEL JAAIVD010000002;XM_032913026 XP_032768917 protein-coding 625836948 Aldh1a2 aldehyde dehydrogenase 1 family member A2 ENCODES a protein that exhibits 3-chloroallyl aldehyde dehydrogenase activity (ortholog); retinal binding (ortholog); retinal dehydrogenase (NAD+) activity (ortholog); INVOLVED IN 9-cis-retinoic acid biosynthetic process (ortholog); anterior/posterior pattern specification (ortholog); blood vessel development (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; retinol metabolic pathway; vitamin A deficiency pathway; ASSOCIATED WITH Coronary Occlusion (ortholog); Diaphragmatic Hernia 4 (ortholog); DiGeorge syndrome (ortholog); FOUND IN cytoplasm (ortholog); perinuclear region of cytoplasm (ortholog) 8 65525687 65605800 + 30032202 116906699 MODEL JAAIVD010000027;XM_032909495 XP_032765386 retinal dehydrogenase 2 protein-coding 625836966 Klhl28 kelch like family member 28 7 78646748 78672400 - 22301074 116905102 MODEL JAAIVD010000026;XM_032907833 XP_032763724 kelch-like protein 28 protein-coding 625836975 LOC116905537 PRELI domain containing protein 3B-like 7 9643666 9644961 - 30032202 116905537 MODEL JAAIVD010000026;XM_032908576 XP_032764467 protein-coding 625836981 LOC116890553 small nucleolar RNA SNORA17 1 27468364 27468463 + 116890553 MODEL JAAIVD010000025 pseudo 625836982 LOC116894836 U6 spliceosomal RNA 2 101339789 101339895 + 116894836 MODEL JAAIVD010000001;XR_004387051 snrna 625836985 LOC116888702 actin, cytoplasmic 1-like X 3886673 3887685 + 116888702 MODEL JAAIVD010000014 pseudo 625836986 LOC116887963 mitochondrial glycine transporter-like X 66080360 66081439 - 30032202 116887963 MODEL JAAIVD010000014;XM_032889408 XP_032745299 protein-coding 625836989 COX2 ENCODES a protein that exhibits copper ion binding (inferred); cytochrome-c oxidase activity (inferred); metal ion binding (inferred); INVOLVED IN ATP synthesis coupled electron transport (inferred); electron transport chain (inferred); proton transmembrane transport (inferred); FOUND IN membrane (inferred); mitochondrial inner membrane (inferred) MT 6999 7682 + 7751802 B7SE64 REVIEWED EU273707 ABX45236;YP_002791019 COII cytochrome c oxidase subunit II protein-coding 625836990 LOC116899884 small nucleolar RNA SNORA17 4 173351771 173351895 + 116899884 MODEL JAAIVD010000003 pseudo 625836991 P2ry1 purinergic receptor P2Y1 ENCODES a protein that exhibits A1 adenosine receptor binding (ortholog); ADP binding (ortholog); ATP binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); blood vessel diameter maintenance (ortholog); cellular response to purine-containing compound (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); impotence (ortholog); thrombosis (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cell body (ortholog) 3 94056980 94061973 - 22301074;30032202 116896834 MODEL JAAIVD010000012;XM_032898315 XP_032754206 P2Y purinoceptor 1 protein-coding 625836997 LOC116884094 small nucleolar RNA SNORA17 14 25506084 25506211 - 116884094 MODEL JAAIVD010000009;XR_004385833 snorna 625837000 LOC116889501 small nucleolar RNA SNORA48 X 12032155 12032294 - 116889501 MODEL JAAIVD010000014;XR_004386448 snorna 625837003 Rgs18 regulator of G protein signaling 18 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); regulation of G protein-coupled receptor signaling pathway (ortholog); FOUND IN cytoplasm (ortholog) 10 24611427 24634681 - 116911164 MODEL JAAIVD010000005;XM_032915026 XP_032770917 regulator of G-protein signaling 18 protein-coding 625837012 B4galt2 beta-1,4-galactosyltransferase 2 ENCODES a protein that exhibits beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity (ortholog); INVOLVED IN brain development (ortholog); cerebellar Purkinje cell layer development (ortholog); locomotory behavior (ortholog); FOUND IN Golgi apparatus (ortholog) 1 39138586 39148428 + 22301074;30032202 116898039 MODEL JAAIVD010000025;XM_032899435 XP_032755326 protein-coding 625837023 LOC116887533 ribosyldihydronicotinamide dehydrogenase [quinone]-like 18 15255046 15255844 + 116887533 MODEL JAAIVD010000013 pseudo 625837024 LOC116904390 hsc70-interacting protein-like 6 95780147 95781221 - 116904390 MODEL JAAIVD010000024 pseudo 625837025 LOC116906637 olfactory receptor 6X1 8 34784021 34784959 + 22301074;30032202 116906637 MODEL JAAIVD010000027;XM_032909414 XP_032765305 protein-coding 625837028 LOC116902446 uncharacterized LOC116902446 5 158588102 158592582 - 116902446 MODEL JAAIVD010000023;XR_004388075 ncrna 625837033 LOC116890538 small nucleolar RNA SNORA17 1 45307215 45307341 - 116890538 MODEL JAAIVD010000025;XR_004386719 snorna 625837036 Ppm1l protein phosphatase, Mg2+/Mn2+ dependent 1L ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); INVOLVED IN cell surface receptor protein serine/threonine kinase signaling pathway (ortholog); MAPK cascade (ortholog); ASSOCIATED WITH obesity (ortholog) 3 85756567 85761334 - 30032202 116896792 MODEL JAAIVD010000012;XM_032898261 XP_032754152 protein phosphatase 1L protein-coding 625837042 LOC116890452 small nucleolar RNA SNORD38 1 40778068 40778137 - 116890452 MODEL JAAIVD010000025;XR_004386644 snorna 625837045 LOC116897885 heterogeneous nuclear ribonucleoprotein Q-like 4 29689849 29691337 - 116897885 MODEL JAAIVD010000003 pseudo 625837046 C2H10orf143 chromosome 2 C10orf143 homolog 2 64531703 64566556 + 116891376 MODEL JAAIVD010000001;XM_032892377 XP_032748268 uncharacterized protein C10orf143 homolog protein-coding 625837054 LOC116886551 uncharacterized LOC116886551 17 23920895 23924468 + 116886551 MODEL JAAIVD010000011;XR_004386112 ncrna 625837058 Xpo5 exportin 5 ENCODES a protein that exhibits mRNA binding (ortholog); nuclear export signal receptor activity (ortholog); pre-miRNA binding (ortholog); INVOLVED IN pre-miRNA export from nucleus (ortholog); protein export from nucleus (ortholog); PARTICIPATES IN microRNA pathway; ribosome biogenesis pathway; ASSOCIATED WITH breast cancer (ortholog); colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 4 83627678 83665371 - 22301074;30032202 116899118 MODEL JAAIVD010000003;XM_032900640 XP_032756531 exportin-5 protein-coding 625837094 LOC116889814 endoplasmic reticulum-Golgi intermediate compartment protein 2-like 1 150203568 150204614 + 116889814 MODEL JAAIVD010000025 pseudo 625837095 LOC116894324 40S ribosomal protein S24-like 2 151464749 151465248 + 22301074;30032202 116894324 MODEL JAAIVD010000001;XM_032896020 XP_032751911 protein-coding 625837100 Nkx2-4 NK2 homeobox 4 5 126680045 126681588 - 22301074;30032202 116900664 MODEL JAAIVD010000023;XM_032902367 XP_032758258 homeobox protein Nkx-2.4 protein-coding 625837105 Ate1 arginyltransferase 1 ENCODES a protein that exhibits arginyl-tRNA--protein transferase activity (ortholog); INVOLVED IN proteasomal protein catabolic process (ortholog); protein arginylation (ortholog); response to oxidative stress (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 71570421 71685201 + 22301074;30032202 116891422 MODEL JAAIVD010000001;XM_032892456;XM_032892457;XM_032892459;XM_032892460;XM_032892461;XM_032892462;XM_032892463 XP_032748347;XP_032748348;XP_032748350;XP_032748351;XP_032748352;XP_032748353;XP_032748354 arginyl-tRNA--protein transferase 1 protein-coding 625837135 LOC116900140 olfactory receptor 1L4-like 5 14744822 14745814 - 22301074 116900140 MODEL JAAIVD010000023;XM_032901914 XP_032757805 protein-coding 625837138 LOC116887794 small nucleolar RNA SNORA48 18 45431889 45432032 - 116887794 MODEL JAAIVD010000013;XR_004386289 snorna 625837141 LOC116884943 apoptosis inhibitor 5-like 15 23310489 23327853 - 30032202 116884943 MODEL JAAIVD010000010;XM_032886151 XP_032742042 protein-coding 625837148 Pdzk1ip1 PDZK1 interacting protein 1 INVOLVED IN D-glucose import across plasma membrane (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog) 1 41489580 41501501 - 116887537 MODEL JAAIVD010000025;XM_032889372 XP_032745263 PDZK1-interacting protein 1 protein-coding 625837156 Il17b interleukin 17B ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN positive regulation of cytokine production involved in inflammatory response (ortholog); ASSOCIATED WITH Keratoconus 1 (ortholog) 15 70264651 70269103 - 22301074 116884700 MODEL JAAIVD010000010;XM_032885888 XP_032741779 interleukin-17B protein-coding 625837163 LOC116893837 pancreatic lipase-related protein 2 2 57339547 57357943 - 22301074;30032202 116893837 MODEL JAAIVD010000001;XM_032895553 XP_032751444 protein-coding 625837179 LOC116888874 U1 small nuclear ribonucleoprotein C-like X 88241957 88242426 - 116888874 MODEL JAAIVD010000014 pseudo 625837180 Sdk1 sidekick cell adhesion molecule 1 INVOLVED IN behavioral response to cocaine (ortholog); regulation of dendritic spine development (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); megacolon (ortholog); prostate cancer (ortholog) 16 10947789 11377723 - 22301074 116885874 MODEL JAAIVD010000004;XM_032887198 XP_032743089 protein sidekick-1 protein-coding 625837227 Sntn sentan, cilia apical structure protein FOUND IN cilium (ortholog) 12 83635695 83648914 + 22301074 116914005 MODEL JAAIVD010000007;XM_032918277 XP_032774168 sentan protein-coding 625837235 Slc39a13 solute carrier family 39 member 13 ENCODES a protein that exhibits protein homodimerization activity (ortholog); zinc ion transmembrane transporter activity (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); connective tissue development (ortholog); intracellular zinc ion homeostasis (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH alcohol-associated liver disease (ortholog); bone disease (ortholog); connective tissue disease (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) 5 65230153 65238186 - 22301074;30032202 116901609 MODEL JAAIVD010000023;XM_032903646;XR_004388007 XP_032759537 zinc transporter ZIP13 protein-coding 625837253 Adgrf4 adhesion G protein-coupled receptor F4 INVOLVED IN erythrocyte development (ortholog); gene expression (ortholog); glomerular filtration (ortholog); ASSOCIATED WITH schizophrenia (ortholog) 4 93392834 93424390 + 22301074 116898084 MODEL JAAIVD010000003;XM_032899471 XP_032755362 protein-coding 625837267 LOC116906448 small nucleolar RNA SNORA17 7 44417982 44418116 + 116906448 MODEL JAAIVD010000026;XR_004388707 snorna 625837270 LOC116909165 olfactory receptor 1468-like 9 44559868 44560803 + 22301074;30032202 116909165 MODEL JAAIVD010000002;XM_032912655 XP_032768546 protein-coding 625837273 LOC116895431 Fc receptor-like protein 1 3 66175995 66209056 - 22301074;30032202 116895431 MODEL JAAIVD010000012;XM_032896708;XM_032896709;XM_032896710;XM_032896712;XM_032896713 XP_032752599;XP_032752600;XP_032752601;XP_032752603;XP_032752604 CD5 antigen-like protein-coding 625837303 C2H19orf84 chromosome 2 C19orf84 homolog ASSOCIATED WITH COVID-19 (ortholog) 2 156050147 156051141 - 116894369 MODEL JAAIVD010000001;XM_032896074 XP_032751965 uncharacterized protein C19orf84 homolog protein-coding 625837307 LOC116894388 olfactory receptor 13A1-like 2 156852174 156853124 + 22301074 116894388 MODEL JAAIVD010000001;XM_032896095 XP_032751986 protein-coding 625837311 LOC116910664 small nucleolar RNA R38 9 67398916 67398991 - 116910664 MODEL JAAIVD010000002;XR_004389196 snorna 625837314 Duoxa1 dual oxidase maturation factor 1 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN hydrogen peroxide biosynthetic process (ortholog); hydrogen peroxide metabolic process (ortholog); intracellular protein localization (ortholog); FOUND IN cell leading edge (ortholog); endoplasmic reticulum (ortholog); plasma membrane (ortholog) 5 100409682 100420192 - 22301074;30032202 116900606 MODEL JAAIVD010000023;XM_032902322;XM_032902323 XP_032758213;XP_032758214 protein-coding 625837330 LOC116904749 small nucleolar RNA SNORA17 6 92051008 92051130 - 116904749 MODEL JAAIVD010000024 pseudo 625837331 LOC116900256 olfactory receptor 2G3-like 5 63138526 63139461 + 22301074 116900256 MODEL JAAIVD010000023;XM_032902008 XP_032757899 protein-coding 625837334 Trpv3 transient receptor potential cation channel subfamily V member 3 ENCODES a protein that exhibits calcium channel activity (ortholog); identical protein binding (ortholog); monoatomic cation channel activity (ortholog); INVOLVED IN negative regulation of hair cycle (ortholog); positive regulation of calcium ion import (ortholog); response to temperature stimulus (ortholog); ASSOCIATED WITH alopecia (ortholog); atopic dermatitis (ortholog); autosomal dominant mutilating palmoplantar keratoderma with periorificial keratotic plaques (ortholog); FOUND IN cytoplasm (ortholog); lysosome (ortholog); membrane (ortholog) 9 42215606 42247894 - 22301074;30032202 116909568 MODEL JAAIVD010000002;XM_032913186 XP_032769077 protein-coding 625837356 Yaf2 YY1 associated factor 2 ENCODES a protein that exhibits transcription coactivator activity (ortholog); transcription corepressor activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of DNA-templated transcription (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 1 266217465 266271712 - 30032202 116884264 MODEL JAAIVD010000025;XM_032885352 XP_032741243 YY1-associated factor 2 protein-coding 625837364 LOC116908928 keratin-associated protein 2-1-like 9 54434927 54435325 - 116908928 MODEL JAAIVD010000002 pseudo 625837365 Dexi Dexi homolog 9 11808466 11811953 + 116909118 MODEL JAAIVD010000002;XM_032912594 XP_032768485 dexamethasone-induced protein protein-coding 625837371 Timp4 TIMP metallopeptidase inhibitor 4 INVOLVED IN Notch signaling pathway (ortholog); ovulation cycle (ortholog); response to cytokine (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Arteriovenous Fistula (ortholog); Breast Neoplasms (ortholog); FOUND IN extracellular region (ortholog); sarcomere (ortholog) 6 31460689 31467850 + 22301074;30032202 116903388 MODEL JAAIVD010000024;XM_032905884;XM_032905885 XP_032761775;XP_032761776 metalloproteinase inhibitor 4 protein-coding 625837385 Rtbdn retbindin ENCODES a protein that exhibits riboflavin binding (ortholog); ASSOCIATED WITH Ependymomas (ortholog); FOUND IN external side of plasma membrane (ortholog); interphotoreceptor matrix (ortholog) 17 15332370 15339196 - 30032202 116886039 MODEL JAAIVD010000011;XM_032887342 XP_032743233 protein-coding 625837395 Aig1 androgen induced 1 ENCODES a protein that exhibits hydrolase activity (ortholog); INVOLVED IN long-chain fatty acid catabolic process (ortholog); FOUND IN membrane (ortholog) 2 223314406 223537553 + 22301074;30032202 116893006 MODEL JAAIVD010000001;XM_032894968;XM_032894969 XP_032750859;XP_032750860 androgen-induced gene 1 protein protein-coding 625837410 LOC116904765 small nucleolar RNA SNORA17 6 49260751 49260882 - 116904765 MODEL JAAIVD010000024;XR_004388438 snorna 625837413 Htr3b 5-hydroxytryptamine receptor 3B ENCODES a protein that exhibits serotonin-gated monoatomic cation channel activity (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); positive regulation of ion transmembrane transporter activity (ortholog); serotonin receptor signaling pathway (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); Cocaine-Related Disorders (ortholog); depressive disorder (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); neuronal cell body (ortholog) 8 43426717 43456607 - 22301074;30032202 116907999 MODEL JAAIVD010000027;XM_032911255 XP_032767146 protein-coding 625837425 LOC116894208 olfactory receptor 502-like 2 106445593 106446538 + 22301074;30032202 116894208 MODEL JAAIVD010000001;XM_032895920 XP_032751811 protein-coding 625837428 Prelid1 PRELI domain containing 1 ENCODES a protein that exhibits phosphatidic acid transfer activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of mitochondrial membrane potential (ortholog); negative regulation of release of cytochrome c from mitochondria (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) 14 73646732 73649802 + 30032202 116883466 MODEL JAAIVD010000009;XM_032884618;XM_032884619 XP_032740509;XP_032740510 PRELI domain-containing protein 1, mitochondrial protein-coding 625837440 Cdpf1 cysteine rich DPF motif domain containing 1 1 255151979 255161042 - 116914688 MODEL JAAIVD010000025;XM_032919112;XM_032919119;XM_032919126 XP_032775003;XP_032775010;XP_032775017 cysteine-rich DPF motif domain-containing protein 1 protein-coding 625837458 LOC116890519 U1 spliceosomal RNA 1 157285093 157285259 - 116890519 MODEL JAAIVD010000025;XR_004386701 snrna 625837461 LOC116895846 phosphoserine aminotransferase-like 3 85661335 85662370 + 116895846 MODEL JAAIVD010000012 pseudo 625837462 LOC116893355 zinc finger protein 709-like 2 160143636 160157490 - 30032202 116893355 MODEL JAAIVD010000001;XM_032895160 XP_032751051 protein-coding 625837471 Phkb phosphorylase kinase regulatory subunit beta INVOLVED IN glucose homeostasis (ortholog); glycogen catabolic process (ortholog); positive regulation of glycogen catabolic process (ortholog); PARTICIPATES IN glycogen degradation pathway; ASSOCIATED WITH genetic disease (ortholog); glycogen storage disease IXB (ortholog); FOUND IN phosphorylase kinase complex (ortholog) 17 13263325 13438974 + 30032202 116886321 MODEL JAAIVD010000011;XM_032887765;XM_032887766;XM_032887767;XM_032887768;XM_032887769 XP_032743656;XP_032743657;XP_032743658;XP_032743659;XP_032743660 phosphorylase b kinase regulatory subunit beta protein-coding 625837522 LOC116913228 alpha-enolase-like 12 71391573 71392531 - 116913228 MODEL JAAIVD010000007 pseudo 625837523 Carnmt1 carnosine N-methyltransferase 1 ENCODES a protein that exhibits carnosine N-methyltransferase activity (ortholog); protein homodimerization activity (ortholog); protein-L-histidine N-pros-methyltransferase activity (ortholog); INVOLVED IN carnosine metabolic process (ortholog); PARTICIPATES IN histidine metabolic pathway; histidinemia pathway; ASSOCIATED WITH intellectual disability (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) 2 18683517 18713409 + 22301074;30032202 116891017 MODEL JAAIVD010000001;XM_032891695;XM_032891696;XM_032891697 XP_032747586;XP_032747587;XP_032747588 carnosine N-methyltransferase protein-coding 625837542 Mst1r macrophage stimulating 1 receptor ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN positive regulation of MAP kinase activity (ortholog); positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); response to virus (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); multiple myeloma (ortholog); nasopharynx carcinoma (ortholog); FOUND IN plasma membrane (ortholog); stress fiber (ortholog); vacuole (ortholog) 8 99239186 99252726 + 22301074;30032202 116907554 MODEL JAAIVD010000027;XM_032910576 XP_032766467 macrophage-stimulating protein receptor protein-coding 625837566 Lrig1 leucine rich repeats and immunoglobulin like domains 1 INVOLVED IN hair cycle process (ortholog); innervation (ortholog); otolith morphogenesis (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog) 6 52262013 52363909 + 22301074 116903482 MODEL JAAIVD010000024;XM_032906048 XP_032761939 leucine-rich repeats and immunoglobulin-like domains protein 1 protein-coding 625837589 LOC116908355 small nucleolar RNA SNORD50 8 81415775 81415846 + 116908355 MODEL JAAIVD010000027;XR_004388905 snorna 625837592 LOC116894840 U6 spliceosomal RNA 2 186304876 186304982 + 116894840 MODEL JAAIVD010000001;XR_004387055 snrna 625837595 LOC116888789 E3 ubiquitin-protein ligase Topors-like 1 102466342 102468890 + 30032202 116888789 MODEL JAAIVD010000025;XM_032890072 XP_032745963 protein-coding 625837600 LOC116895771 zinc finger protein 431-like 1 26628071 26635959 - 22301074 116895771 MODEL JAAIVD010000025;XM_032896925;XM_032896930 XP_032752816;XP_032752821 protein-coding 625837613 Klrk1 killer cell lectin like receptor K1 ENCODES a protein that exhibits identical protein binding (ortholog); kinase binding (ortholog); MHC class I protein binding (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); defense response to Gram-positive bacterium (ortholog); natural killer cell activation (ortholog); ASSOCIATED WITH Adenoviridae Infections (ortholog); AIDS-Related Complex (ortholog); anogenital venereal wart (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) 6 17976229 17986037 + 30032202 116903189 MODEL JAAIVD010000024;XM_032905563;XM_032905564;XM_032905565 XP_032761454;XP_032761455;XP_032761456 NKG2-D type II integral membrane protein protein-coding 625837632 Tex11 testis expressed 11 INVOLVED IN chiasma assembly (ortholog); fertilization (ortholog); male gonad development (ortholog); ASSOCIATED WITH genetic disease (ortholog); male infertility (ortholog); spermatogenic failure 3 (ortholog); FOUND IN central element (ortholog); chromosome (ortholog); condensed nuclear chromosome (ortholog) X 59461661 59622674 + 22301074;30032202 116887927 MODEL JAAIVD010000014;XM_032889391 XP_032745282 testis-expressed protein 11 protein-coding 625837653 Ube2q2 ubiquitin conjugating enzyme E2 Q2 ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN protein K48-linked ubiquitination (ortholog); ASSOCIATED WITH congenital dyserythropoietic anemia (ortholog) 8 49207530 49262153 + 22301074 116907992 MODEL JAAIVD010000027;XM_032911244;XM_032911245 XP_032767135;XP_032767136 ubiquitin-conjugating enzyme E2 Q2 protein-coding 625837673 LOC116902520 U7 small nuclear RNA 5 17445345 17445406 + 116902520 MODEL JAAIVD010000023;XR_004388129 snrna 625837676 Arr3 arrestin 3 ENCODES a protein that exhibits opsin binding (ortholog); phosphoprotein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN endocytosis (ortholog); regulation of protein phosphorylation (ortholog); PARTICIPATES IN eicosanoid signaling pathway; visual phototransduction pathway; ASSOCIATED WITH genetic disease (ortholog); Myopia 26, X-Linked, Female-Limited (ortholog); syndromic microphthalmia 5 (ortholog); FOUND IN photoreceptor inner segment (ortholog); photoreceptor outer segment (ortholog); synapse (ortholog) X 58358902 58366647 + 22301074;30032202 116887920 MODEL JAAIVD010000014;XM_032889386 XP_032745277 arrestin-C protein-coding 625837692 Lmod2 leiomodin 2 ENCODES a protein that exhibits actin binding (ortholog); actin monomer binding (ortholog); tropomyosin binding (ortholog); INVOLVED IN actin filament polymerization (ortholog); actin nucleation (ortholog); positive regulation of actin filament polymerization (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); dilated cardiomyopathy 1BB (ortholog); dilated cardiomyopathy 2G (ortholog); FOUND IN actin filament (ortholog); cardiac myofibril (ortholog); M band (ortholog) 6 114735860 114743628 - 22301074;30032202 116902928 MODEL JAAIVD010000024;XM_032905251;XM_032905252 XP_032761142;XP_032761143 leiomodin-2 protein-coding 625837703 Pfdn1 prefoldin subunit 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); protein folding chaperone (ortholog); unfolded protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); B cell activation (ortholog); cerebellum development (ortholog); FOUND IN centrosome (ortholog); prefoldin complex (ortholog) 15 7916190 7973693 + 22301074;30032202 116885003 MODEL JAAIVD010000010;XM_032886235;XM_032886236;XM_032886237;XM_032886238 XP_032742126;XP_032742127;XP_032742128;XP_032742129 protein-coding 625837720 LOC116898130 cryptic protein-like 4 110763059 110770324 + 30032202 116898130 MODEL JAAIVD010000003;XM_032899504;XM_032899505 XP_032755395;XP_032755396 protein-coding 625837734 Smim18 small integral membrane protein 18 13 53266761 53274224 + 116914501 MODEL JAAIVD010000008;XM_032918815;XM_032918816;XM_032918817;XM_032918818 XP_032774706;XP_032774707;XP_032774708;XP_032774709 protein-coding 625837750 LOC116890265 sugar transporter SWEET1-like 1 14008484 14010665 - 116890265 MODEL JAAIVD010000025 pseudo 625837751 Cryba4 crystallin beta A4 ENCODES a protein that exhibits identical protein binding (ortholog); structural constituent of eye lens (ortholog); INVOLVED IN camera-type eye development (ortholog); visual perception (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 23 (ortholog); genetic disease (ortholog) 16 41717887 41730347 + 30032202 116885717 MODEL JAAIVD010000004;XM_032887027;XM_032887028 XP_032742918;XP_032742919 beta-crystallin A4 protein-coding 625837764 Arb2a ARB2 cotranscriptional regulator A INVOLVED IN neural crest cell development (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 3 217521713 217790291 - 30032202 116896090 MODEL JAAIVD010000012;XM_032897067 XP_032752958 Fam172a cotranscriptional regulator FAM172A;family with sequence similarity 172 member A protein-coding 625837775 Tbrg4 transforming growth factor beta regulator 4 INVOLVED IN mitochondrial mRNA processing (ortholog); mRNA metabolic process (ortholog); regulation of mitochondrial mRNA stability (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 11 75546214 75554359 - 22301074;30032202 116912358 MODEL JAAIVD010000006;XM_032916413;XM_032916414;XM_032916415;XM_032916416;XM_032916417 XP_032772304;XP_032772305;XP_032772306;XP_032772307;XP_032772308 FAST kinase domain-containing protein 4 protein-coding 625837806 LOC116907211 uncharacterized LOC116907211 1 159654287 159659332 + 116907211 MODEL JAAIVD010000025;XR_004388810 ncrna 625837810 Efcab14 EF-hand calcium binding domain 14 1 39426325 39466176 + 22301074 116898087 MODEL JAAIVD010000025;XM_032899477 XP_032755368 EF-hand calcium-binding domain-containing protein 14 protein-coding 625837826 LOC116889157 peroxiredoxin-4-like X 37050253 37111339 + 116889157 MODEL JAAIVD010000014 pseudo 625837827 LOC116910308 protein transport protein Sec61 subunit gamma-like 9 49681118 49683012 - 22301074;30032202 116910308 MODEL JAAIVD010000002;XM_032914174 XP_032770065 protein-coding 625837831 Cd4 CD4 molecule ENCODES a protein that exhibits coreceptor activity (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); cellular response to granulocyte macrophage colony-stimulating factor stimulus (ortholog); cellular response to ionomycin (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; interleukin-12 signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); AIDS-Related Opportunistic Infections (ortholog); Alcohol-Related Disorders (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum lumen (ortholog); endoplasmic reticulum membrane (ortholog) 6 23009495 23027872 + 22301074;30032202 116903269 MODEL JAAIVD010000024;XM_032905682 XP_032761573 T-cell surface glycoprotein CD4 protein-coding 625837844 Sugct succinyl-CoA:glutarate-CoA transferase ENCODES a protein that exhibits succinate-hydroxymethylglutarate CoA-transferase activity (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); glutaric acidemia type 3 (ortholog); migraine (ortholog); FOUND IN mitochondrion (ortholog) 14 35630113 36422333 - 22301074 116883191 MODEL JAAIVD010000009;XM_032884226 XP_032740117 succinate--hydroxymethylglutarate CoA-transferase protein-coding 625837861 Evc2 EvC ciliary complex subunit 2 INVOLVED IN smoothened signaling pathway (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 1 (ortholog); Beemer-Langer syndrome (ortholog); FOUND IN ciliary membrane (ortholog); cilium (ortholog); nucleus (ortholog) 11 67731686 67818857 - 22301074;30032202 116912792 MODEL JAAIVD010000006;XM_032916954 XP_032772845 limbin protein-coding 625837884 Snx1 sorting nexin 1 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); identical protein binding (ortholog); insulin receptor binding (ortholog); INVOLVED IN early endosome to Golgi transport (ortholog); endosomal transport (ortholog); endosome membrane tubulation (ortholog); PARTICIPATES IN retromer-mediated pathway; FOUND IN cytoplasm (ortholog); dendritic spine (ortholog); early endosome (ortholog) 8 60422208 60460329 - 22301074;30032202 116906721 MODEL JAAIVD010000027;XM_032909530 XP_032765421 sorting nexin-1 protein-coding 625837903 Myl6 myosin light chain 6 ENCODES a protein that exhibits microfilament motor activity (ortholog); structural constituent of muscle (ortholog); FOUND IN brush border (ortholog); unconventional myosin complex (ortholog) 1 155954367 155957400 - 22301074;30032202 116906148 MODEL JAAIVD010000025;XM_032909133;XM_032909140;XM_032909143;XM_032909149 XP_032765024;XP_032765031;XP_032765034;XP_032765040 myosin light polypeptide 6 protein-coding 625837923 LOC116913160 Y-linked testis-specific protein 1-like 12 45937083 45941982 - 116913160 MODEL JAAIVD010000007 pseudo 625837924 Pde6a phosphodiesterase 6A ENCODES a protein that exhibits 3',5'-cyclic-GMP phosphodiesterase activity (ortholog); INVOLVED IN photoreceptor cell maintenance (ortholog); retina development in camera-type eye (ortholog); visual perception (ortholog); PARTICIPATES IN altered visual phototransduction pathway; retinitis pigmentosa pathway; visual phototransduction pathway; ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); Leber congenital amaurosis (ortholog); FOUND IN photoreceptor outer segment membrane (ortholog); rod photoreceptor phosphodiesterase 6 complex (ortholog) 15 70659965 70728824 - 22301074 116884769 MODEL JAAIVD010000010;XM_032885986 XP_032741877 rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha protein-coding 625837950 LOC116887659 60S ribosomal protein L17-like 1 53520783 53521355 - 116887659 MODEL JAAIVD010000025 pseudo 625837951 LOC116883456 serine/threonine-protein kinase NLK-like 14 40945956 40947525 - 116883456 MODEL JAAIVD010000009 pseudo 625837952 N4bp2l1 NEDD4 binding protein 2 like 1 16 125762 149406 - 116885560 MODEL JAAIVD010000004;XM_032886853 XP_032742744 NEDD4-binding protein 2-like 1 protein-coding 625837961 LOC116895057 small nucleolar RNA SNORA17 2 204419544 204419666 - 116895057 MODEL JAAIVD010000001 pseudo 625837962 Tep1 telomerase associated protein 1 ENCODES a protein that exhibits enzyme binding (ortholog); p53 binding (ortholog); RNA binding (ortholog); INVOLVED IN telomere maintenance via recombination (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); intrahepatic cholangiocarcinoma (ortholog); Lung Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); nuclear matrix (ortholog); ribonucleoprotein complex (ortholog) 12 72441490 72488924 + 22301074;30032202 116913428 MODEL JAAIVD010000007;XM_032917620 XP_032773511 telomerase protein component 1 protein-coding 625838021 LOC116895375 60S acidic ribosomal protein P0-like 3 53679377 53680321 - 22301074;30032202 116895375 MODEL JAAIVD010000012;XM_032896669 XP_032752560 protein-coding 625838024 LOC116897432 U6 spliceosomal RNA 3 179757404 179757510 - 116897432 MODEL JAAIVD010000012;XR_004387473 snrna 625838027 Nde1 nudE neurodevelopment protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN centrosome duplication (ortholog); cerebral cortex development (ortholog); chromosome localization (ortholog); ASSOCIATED WITH Familial Thoracic Aortic Aneurysm 4 (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN centrosome (ortholog); kinetochore (ortholog); microtubule organizing center (ortholog) 9 8038031 8077922 - 30032202 116909883 MODEL JAAIVD010000002;XM_032913621 XP_032769512 nuclear distribution protein nudE homolog 1 protein-coding 625838040 LOC116913650 olfactory receptor 8G1-like 12 56615 62312 - 22301074;30032202 116913650 MODEL JAAIVD010000007;XM_032917919 XP_032773810 protein-coding 625838046 Jph4 junctophilin 4 INVOLVED IN learning (ortholog); neuromuscular process controlling balance (ortholog); regulation of cytokine production (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN dendritic shaft (ortholog); smooth endoplasmic reticulum (ortholog) 12 69882280 69891655 + 22301074;30032202 116913499 MODEL JAAIVD010000007;XM_032917701 XP_032773592 junctophilin-4 protein-coding 625838056 Utp20 UTP20 small subunit processome component INVOLVED IN ribosomal small subunit biogenesis (ortholog); rRNA processing (ortholog); FOUND IN nucleolus (ortholog); small-subunit processome (ortholog) 1 167797561 167879274 - 30032202 116907812 MODEL JAAIVD010000025;XM_032910993 XP_032766884 small subunit processome component 20 homolog protein-coding 625838122 LOC116893680 olfactory receptor 5AN1-like 2 12379707 12380648 - 22301074;30032202 116893680 MODEL JAAIVD010000001;XM_032895397 XP_032751288 protein-coding 625838125 Ssbp3 single stranded DNA binding protein 3 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN head development (ortholog); head morphogenesis (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH Developmental Disease (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN protein-containing complex (ortholog); transcription regulator complex (ortholog) 1 47763856 47900553 - 22301074;30032202 116899333 MODEL JAAIVD010000025;XM_032901023;XM_032901029;XM_032901037;XM_032901047;XM_032901057;XM_032901066 XP_032756914;XP_032756920;XP_032756928;XP_032756938;XP_032756948;XP_032756957 single-stranded DNA-binding protein 3 protein-coding 625838162 LOC116904470 transcription termination factor 1, mitochondrial-like 6 136482080 136483146 + 116904470 MODEL JAAIVD010000024 pseudo 625838163 LOC116904796 U2 spliceosomal RNA 6 42870562 42870701 - 116904796 MODEL JAAIVD010000024 pseudo 625838164 Flrt3 fibronectin leucine rich transmembrane protein 3 ENCODES a protein that exhibits chemorepellent activity (ortholog); fibroblast growth factor receptor binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN axon guidance (ortholog); cell-cell adhesion (ortholog); embryonic morphogenesis (ortholog); ASSOCIATED WITH hypogonadotropic hypogonadism 21 with or without anosmia (ortholog); hypogonadotropic hypogonadism 7 with or without anosmia (ortholog); Spontaneous Abortions (ortholog); FOUND IN axon terminus (ortholog); axonal growth cone (ortholog); cell-cell junction (ortholog) 5 119923154 119936491 - 22301074;30032202 116899995 MODEL JAAIVD010000023;XM_032901804 XP_032757695 leucine-rich repeat transmembrane protein FLRT3 protein-coding 625838171 Sptlc1 serine palmitoyltransferase long chain base subunit 1 ENCODES a protein that exhibits serine C-palmitoyltransferase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); glycosphingolipid biosynthetic process (ortholog); positive regulation of lipophagy (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Charcot-Marie-Tooth disease (ortholog); genetic disease (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 14 71644251 71683239 - 22301074;30032202 116883375 MODEL JAAIVD010000009;XM_032884491 XP_032740382 serine palmitoyltransferase 1 protein-coding 625838190 Cdhr2 cadherin related family member 2 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); INVOLVED IN brush border assembly (ortholog); cell-cell adhesion mediated by cadherin (ortholog); epithelial cell differentiation (ortholog); FOUND IN apical plasma membrane (ortholog); brush border (ortholog); brush border membrane (ortholog) 14 73043061 73080094 + 22301074;30032202 116915229 MODEL JAAIVD010000009;XM_032919618 XP_032775509 cadherin-related family member 2 protein-coding 625838226 Znf688 zinc finger protein 688 2 74469903 74473131 + 22301074 116891475 MODEL JAAIVD010000001;XM_032892576 XP_032748467 protein-coding 625838233 LOC116900935 60S ribosomal protein L6-like 5 83212157 83213038 - 116900935 MODEL JAAIVD010000023 pseudo 625838234 LOC116897731 NEDD4-binding protein 1-like 4 93204675 93207179 - 116897731 MODEL JAAIVD010000003 pseudo 625838235 Bend6 BEN domain containing 6 ENCODES a protein that exhibits chromatin binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN negative regulation of Notch signaling pathway (ortholog); positive regulation of neuron differentiation (ortholog); FOUND IN nucleus (ortholog) 4 110107321 110137250 - 22301074;30032202 116899269 MODEL JAAIVD010000003;XM_032900892 XP_032756783 BEN domain-containing protein 6 protein-coding 625838245 Plag1 PLAG1 zinc finger ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN gland morphogenesis (ortholog); multicellular organism growth (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog) 7 72775543 72819129 + 30032202 116905087 MODEL JAAIVD010000026;XM_032907806;XM_032907807;XM_032907808 XP_032763697;XP_032763698;XP_032763699 zinc finger protein PLAG1 protein-coding 625838261 Naa35 N-alpha-acetyltransferase 35, NatC auxiliary subunit INVOLVED IN negative regulation of apoptotic process (ortholog); smooth muscle cell proliferation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); NatC complex (ortholog) 14 78494326 78548133 - 22301074;30032202 116883805 MODEL JAAIVD010000009;XM_032885052;XM_032885053;XM_032885054 XP_032740943;XP_032740944;XP_032740945 protein-coding 625838292 LOC116894999 small nucleolar RNA SNORA29 2 191647120 191647256 + 116894999 MODEL JAAIVD010000001;XR_004387188 snorna 625838295 LOC116889072 protein FAM156A/FAM156B-like X 17396279 17396691 + 116889072 MODEL JAAIVD010000014 pseudo 625838296 LOC116902589 small nucleolar RNA SNORA17 5 107650102 107650228 + 116902589 MODEL JAAIVD010000023;XR_004388181 snorna 625838299 LOC116910679 small nucleolar RNA SNORA44 9 3510078 3510183 - 116910679 MODEL JAAIVD010000002;XR_004389210 snorna 625838302 LOC116893614 tumor necrosis factor receptor superfamily member 22-like 2 6032845 6046585 + 22301074;30032202 116893614 MODEL JAAIVD010000001;XM_032895322;XM_032895323;XM_032895324;XM_032895325 XP_032751213;XP_032751214;XP_032751215;XP_032751216 protein-coding 625838320 LOC116890313 U4 spliceosomal RNA 1 38446875 38446987 + 116890313 MODEL JAAIVD010000025 pseudo 625838321 Plpp7 phospholipid phosphatase 7 (inactive) INVOLVED IN negative regulation of myotube differentiation (ortholog); FOUND IN nuclear envelope (ortholog) 5 3522410 3537041 - 30032202 116901156 MODEL JAAIVD010000023;XM_032902797 XP_032758688 inactive phospholipid phosphatase 7 protein-coding 625838327 Cabp1 calcium binding protein 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN modification of postsynaptic actin cytoskeleton (ortholog); negative regulation of cell communication by electrical coupling (ortholog); negative regulation of protein import into nucleus (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); schizophrenia (ortholog); Serotonin Syndrome (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendrite (ortholog) 16 38634337 38660134 + 22301074 116885387 MODEL JAAIVD010000004;XM_032886667 XP_032742558 calcium-binding protein 1 protein-coding 625838337 LOC116908305 serine protease 42-like 8 101378434 101383547 + 22301074 116908305 MODEL JAAIVD010000027;XM_032911582 XP_032767473 protein-coding 625838345 Ankrd30a ankyrin repeat domain 30A ASSOCIATED WITH Breast Cancer, Familial (ortholog) 6 28178338 28250474 + 22301074 116903347 MODEL JAAIVD010000024;XM_032905809 XP_032761700 ankyrin repeat domain-containing protein 30A protein-coding 625838383 Cct4 chaperonin containing TCP1 subunit 4 ENCODES a protein that exhibits protein folding chaperone (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); positive regulation of protein localization to Cajal body (ortholog); positive regulation of telomerase RNA localization to Cajal body (ortholog); ASSOCIATED WITH hereditary sensory and autonomic neuropathy (ortholog); FOUND IN cell body (ortholog); centrosome (ortholog); chaperonin-containing T-complex (ortholog) 11 93889264 93901736 - 22301074;30032202 116912289 MODEL JAAIVD010000006;XM_032916288 XP_032772179 T-complex protein 1 subunit delta protein-coding 625838401 Chkb choline kinase beta ENCODES a protein that exhibits choline kinase activity (ortholog); ethanolamine kinase activity (ortholog); INVOLVED IN muscle organ development (ortholog); phosphatidylcholine biosynthetic process (ortholog); phosphatidylethanolamine biosynthetic process (ortholog); ASSOCIATED WITH intellectual disability (ortholog); megaconial type congenital muscular dystrophy (ortholog); muscular dystrophy (ortholog) 1 258732697 258736121 - 30032202 116915162 MODEL JAAIVD010000025;XM_032919567;XM_032919569 XP_032775458;XP_032775460 choline/ethanolamine kinase protein-coding 625838419 Slc38a5 solute carrier family 38 member 5 ENCODES a protein that exhibits alanine transmembrane transporter activity (ortholog); amino acid transmembrane transporter activity (ortholog); glycine transmembrane transporter activity (ortholog); INVOLVED IN amino acid export across plasma membrane (ortholog); amino acid import across plasma membrane (ortholog); asparagine transmembrane transport (ortholog); ASSOCIATED WITH Endotoxemia (ortholog); FOUND IN plasma membrane (ortholog) X 15681661 15689739 + 30032202 116889011 MODEL JAAIVD010000014;XM_032890221 XP_032746112 sodium-coupled neutral amino acid transporter 5 protein-coding 625838437 LOC116889059 rhox homeobox family member 1-like X 103414119 103418290 - 22301074 116889059 MODEL JAAIVD010000014;XM_032890247 XP_032746138 protein-coding 625838444 Pde8b phosphodiesterase 8B ENCODES a protein that exhibits 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); INVOLVED IN behavioral fear response (ortholog); negative regulation of insulin secretion (ortholog); negative regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH basal ganglia disease (ortholog); congenital adrenal hyperplasia (ortholog); Dysarthria (ortholog) 3 201115445 201314526 + 22301074;30032202 116897281 MODEL JAAIVD010000012;XM_032899014 XP_032754905 high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8B protein-coding 625838470 Capns2 calpain small subunit 2 ENCODES a protein that exhibits calcium-dependent cysteine-type endopeptidase activity (ortholog) 22301074 116889777 MODEL JAAIVD010000238;XM_032890633 XP_032746524 protein-coding 625838471 Chst4 carbohydrate sulfotransferase 4 ENCODES a protein that exhibits N-acetylglucosamine 6-O-sulfotransferase activity (ortholog); INVOLVED IN leukocyte tethering or rolling (ortholog); N-acetylglucosamine metabolic process (ortholog); positive regulation of leukocyte tethering or rolling (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN trans-Golgi network (ortholog) 17 29730011 29741173 - 22301074;30032202 116886435 MODEL JAAIVD010000011;XM_032887918;XM_032887920 XP_032743809;XP_032743811 protein-coding 625838480 Ccr9 C-C motif chemokine receptor 9 ENCODES a protein that exhibits C-C chemokine receptor activity (ortholog); INVOLVED IN CD8-positive, gamma-delta intraepithelial T cell differentiation (ortholog); chemotaxis (ortholog); ASSOCIATED WITH allergic disease (ortholog); asthma (ortholog); COVID-19 (ortholog); FOUND IN cell surface (ortholog) 8 114886727 114889414 + 22301074;30032202 116907068 MODEL JAAIVD010000027;XM_032910023 XP_032765914 C-C chemokine receptor type 9 protein-coding 625838485 LOC116894110 olfactory receptor 52N4 2 103606945 103607910 + 22301074 116894110 MODEL JAAIVD010000001;XM_032895829 XP_032751720 protein-coding 625838488 LOC116913150 putative sperm motility kinase W 12 41496990 41498510 + 22301074;30032202 116913150 MODEL JAAIVD010000007;XM_032917362 XP_032773253 protein-coding 625838491 Ttll12 tubulin tyrosine ligase like 12 ENCODES a protein that exhibits histone H4K20 trimethyltransferase activity (ortholog); histone H4K20me2 reader activity (ortholog); tubulin-tyrosine ligase activity (ortholog); INVOLVED IN negative regulation of type I interferon-mediated signaling pathway (ortholog); regulation of mitotic cell cycle (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 1 252994448 253013655 - 22301074 116914447 MODEL JAAIVD010000025;XM_032918752 XP_032774643 tubulin--tyrosine ligase-like protein 12 protein-coding 625838509 LOC116888823 eukaryotic translation initiation factor 4B-like X 107997933 107999926 - 116888823 MODEL JAAIVD010000014;XR_004386341 pseudo 625838512 LOC116891025 aldehyde dehydrogenase, cytosolic 1 2 20779399 20833376 - 30032202 116891025 MODEL JAAIVD010000001;XM_032891706;XM_032891707 XP_032747597;XP_032747598 protein-coding 625838533 Slc39a6 solute carrier family 39 member 6 ENCODES a protein that exhibits zinc ion transmembrane transporter activity (ortholog); INVOLVED IN epithelial to mesenchymal transition (ortholog); intracellular zinc ion homeostasis (ortholog); lymphocyte activation (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); esophagus squamous cell carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN apical plasma membrane (ortholog); endoplasmic reticulum (ortholog); lamellipodium membrane (ortholog) 15 19267922 19288840 + 22301074;30032202 116884265 MODEL JAAIVD010000010;XM_032885349 XP_032741240 zinc transporter ZIP6 protein-coding 625838547 Stom stomatin ENCODES a protein that exhibits identical protein binding (ortholog); ion channel inhibitor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN host-mediated activation of viral genome replication (ortholog); positive regulation of protein targeting to membrane (ortholog); positive regulation of viral process (ortholog); FOUND IN cytoplasm (ortholog); cytoskeleton (ortholog); endoplasmic reticulum (ortholog) 5 302515 324939 + 30032202 116901101 MODEL JAAIVD010000023;XM_032902664 XP_032758555 erythrocyte band 7 integral membrane protein protein-coding 625838558 LOC116904273 polymerase delta-interacting protein 2-like 6 41823917 41825599 + 116904273 MODEL JAAIVD010000024 pseudo 625838559 C4bpa complement component 4 binding protein alpha INVOLVED IN binding of sperm to zona pellucida (ortholog); negative regulation of complement activation, classical pathway (ortholog); positive regulation of protein catabolic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Radiation Pneumonitis (ortholog); FOUND IN acrosomal matrix (ortholog); acrosomal vesicle (ortholog); cell body (ortholog) 10 5154874 5189274 + 30032202 116911290 MODEL JAAIVD010000005;XM_032915196;XM_032915197 XP_032771087;XP_032771088 C4b-binding protein alpha chain protein-coding 625838580 LOC116894632 serine/arginine-rich splicing factor 3-like 2 194009094 194009549 + 116894632 MODEL JAAIVD010000001 pseudo 625838581 Mmp8 matrix metallopeptidase 8 ENCODES a protein that exhibits calcium ion binding (ortholog); endopeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); endodermal cell differentiation (ortholog); ossification (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); brain infarction (ortholog); breast cancer (ortholog); FOUND IN extracellular region (ortholog) 8 3781693 3790685 + 22301074;30032202 116907693 MODEL JAAIVD010000027;XM_032910800 XP_032766691 neutrophil collagenase protein-coding 625838593 Esd esterase D ENCODES a protein that exhibits hydrolase activity, acting on ester bonds (ortholog); identical protein binding (ortholog); ASSOCIATED WITH Hypoxia (ortholog); osteoarthritis (ortholog); FOUND IN cytosol (ortholog) 12 49635852 49654809 - 22301074;30032202 116913512 MODEL JAAIVD010000007;XM_032917717 XP_032773608 S-formylglutathione hydrolase protein-coding 625838606 Rapgef4 Rap guanine nucleotide exchange factor 4 ENCODES a protein that exhibits cAMP binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); calcium-ion regulated exocytosis (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Burns (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); basolateral plasma membrane (ortholog) 5 49281236 49569224 + 22301074;30032202 116901511 MODEL JAAIVD010000023;XM_032903483;XM_032903485 XP_032759374;XP_032759376 protein-coding 625838646 LOC116887693 ralA-binding protein 1-like 18 23966178 23995625 - 22301074;30032202 116887693 MODEL JAAIVD010000013;XM_032889288 XP_032745179 protein-coding 625838662 Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit ENCODES a protein that exhibits mRNA binding (ortholog); mRNA m(6)A methyltransferase activity (ortholog); mRNA N6-methyladenosine dioxygenase activity (ortholog); INVOLVED IN cellular response to UV (ortholog); chromosomal DNA methylation maintenance following DNA replication (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH Emphysema (ortholog); liver cirrhosis (ortholog); multiple myeloma (ortholog); FOUND IN cytosol (ortholog); nuclear body (ortholog); nuclear speck (ortholog) 12 71588597 71599277 + 22301074;30032202 116913945 MODEL JAAIVD010000007;XM_032918209;XM_032918210 XP_032774100;XP_032774101 N6-adenosine-methyltransferase catalytic subunit;methyltransferase like 3 protein-coding 625838683 Zmynd15 zinc finger MYND-type containing 15 ENCODES a protein that exhibits histone deacetylase binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); spermatid development (ortholog); ASSOCIATED WITH male infertility (ortholog); spermatogenic failure 14 (ortholog); spermatogenic failure 3 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 9 50070359 50076459 + 30032202 116909678 MODEL JAAIVD010000002;XM_032913336;XM_032913337;XM_032913338 XP_032769227;XP_032769228;XP_032769229 zinc finger MYND domain-containing protein 15 protein-coding 625838706 LOC116893751 uncharacterized LOC116893751 2 26328972 26337812 - 116893751 MODEL JAAIVD010000001;XR_004387003 ncrna 625838711 Afap1l1 actin filament associated protein 1 like 1 ASSOCIATED WITH neuromuscular disease (ortholog) 15 70165440 70227496 + 30032202 116884724 MODEL JAAIVD010000010;XM_032885911;XM_032885912 XP_032741802;XP_032741803 actin filament-associated protein 1-like 1 protein-coding 625838738 Ntm neurotrimin ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); cerebellum development (ortholog); negative regulation of glial cell proliferation (ortholog); ASSOCIATED WITH congestive heart failure (ortholog); connective tissue disease (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); excitatory synapse (ortholog) 8 24829138 25780641 - 30032202 116906853 MODEL JAAIVD010000027;XM_032909747;XM_032909748;XM_032909749 XP_032765638;XP_032765639;XP_032765640 protein-coding 625838758 Ccr8 C-C motif chemokine receptor 8 ENCODES a protein that exhibits C-C chemokine receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN chemotaxis (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH asthma (ortholog); pulmonary fibrosis (ortholog); status epilepticus (ortholog) 8 111332033 111333094 + 22301074;30032202 116906655 MODEL JAAIVD010000027;XM_032909440 XP_032765331 C-C chemokine receptor type 8 protein-coding 625838761 Vps11 VPS11 core subunit of CORVET and HOPS complexes ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein domain specific binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN autophagosome-lysosome fusion (ortholog); endosomal vesicle fusion (ortholog); endosome to lysosome transport (ortholog); ASSOCIATED WITH dystonia 32 (ortholog); genetic disease (ortholog); hypomyelinating leukodystrophy 12 (ortholog); FOUND IN actin filament (ortholog); AP-3 adaptor complex (ortholog); CORVET complex (ortholog) 8 38904381 38918556 - 22301074;30032202 116906956 MODEL JAAIVD010000027;XM_032909877;XM_032909878;XM_032909879 XP_032765768;XP_032765769;XP_032765770 vacuolar protein sorting-associated protein 11 homolog protein-coding 625838790 LOC116900968 60S ribosomal protein L7a-like 1 119225709 119226473 - 116900968 MODEL JAAIVD010000025 pseudo 625838791 LOC116894137 olfactory receptor 52E4 2 104009385 104010329 + 22301074 116894137 MODEL JAAIVD010000001;XM_032895855 XP_032751746 protein-coding 625838795 Sun5 Sad1 and UNC84 domain containing 5 INVOLVED IN protein-containing complex assembly (ortholog); regulation of protein localization (ortholog); spermatid development (ortholog); ASSOCIATED WITH spermatogenic failure 16 (ortholog); FOUND IN nuclear inner membrane (ortholog); sperm head-tail coupling apparatus (ortholog) 5 133185739 133206122 - 30032202 116900710 MODEL JAAIVD010000023;XM_032902413;XM_032902414;XM_032902415 XP_032758304;XP_032758305;XP_032758306 SUN domain-containing protein 5 protein-coding 625838818 LOC116905028 uncharacterized LOC116905028 7 64225733 64231371 - 116905028 MODEL JAAIVD010000026;XR_004388480 ncrna 625838824 LOC116910629 U6 spliceosomal RNA 9 13663833 13663937 - 116910629 MODEL JAAIVD010000002;XR_004389168 snrna 625838827 Emid1 EMI domain containing 1 FOUND IN endoplasmic reticulum (ortholog); extracellular matrix (ortholog); Golgi apparatus (ortholog) 11 74081633 74127189 - 22301074 116912406 MODEL JAAIVD010000006;XM_032916466;XM_032916468 XP_032772357;XP_032772359 EMI domain-containing protein 1 protein-coding 625838848 Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); glycolipid binding (ortholog); sulfatide binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); action potential (ortholog); amino acid transport (ortholog); ASSOCIATED WITH cone-rod dystrophy (ortholog); Disease Progression (ortholog); fundus dystrophy (ortholog); FOUND IN autolysosome (ortholog); autophagosome (ortholog); caveola (ortholog) 2 75340955 75352557 + 22301074;30032202 116891520 MODEL JAAIVD010000001;XM_032892658 XP_032748549 battenin protein-coding 625838869 LOC116912750 ATP-binding cassette sub-family G member 3-like 11 14628157 14679282 + 22301074;30032202 116912750 MODEL JAAIVD010000006;XM_032916897 XP_032772788 protein-coding 625838888 LOC116902422 uncharacterized LOC116902422 5 158000796 158002883 - 116902422 MODEL JAAIVD010000023;XR_004388070 ncrna 625838893 LOC116895719 60S ribosomal protein L17-like 3 221876298 221876863 - 116895719 MODEL JAAIVD010000012 pseudo 625838894 LOC116894507 60S ribosomal protein L23a-like 2 173234779 173235300 - 116894507 MODEL JAAIVD010000001 pseudo 625838895 LOC116911466 60S ribosomal protein L37-like 10 69781092 69781412 + 22301074;30032202 116911466 MODEL JAAIVD010000005;XM_032915445 XP_032771336 protein-coding 625838899 Avpr1b arginine vasopressin receptor 1B ENCODES a protein that exhibits identical protein binding (ortholog); peptide hormone binding (ortholog); vasopressin receptor activity (ortholog); INVOLVED IN adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); intracellular pH reduction (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; G protein mediated signaling pathway via Galphas family; vasopressin signaling pathway; ASSOCIATED WITH ACTH-secreting pituitary adenoma (ortholog); alcohol dependence (ortholog); anxiety disorder (ortholog); FOUND IN dendrite (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) 10 4214511 4226088 - 22301074;30032202 116911417 MODEL JAAIVD010000005;XM_032915378 XP_032771269 vasopressin V1b receptor protein-coding 625838906 LOC116892714 ubiquitin carboxyl-terminal hydrolase 29-like 2 179149692 179155738 - 22301074;30032202 116892714 MODEL JAAIVD010000001;XM_032894580 XP_032750471 protein-coding 625838911 Zc3h7a zinc finger CCCH-type containing 7A ENCODES a protein that exhibits miRNA binding (ortholog); INVOLVED IN miRNA processing (ortholog); post-transcriptional regulation of gene expression (ortholog); FOUND IN cytosol (ortholog) 9 11154314 11193417 + 22301074;30032202 116908573 MODEL JAAIVD010000002;XM_032911783;XM_032911784 XP_032767674;XP_032767675 zinc finger CCCH domain-containing protein 7A protein-coding 625838941 LOC116895745 60S ribosomal protein L7-like 3 35319613 35321126 - 116895745 MODEL JAAIVD010000012 pseudo 625838942 Rbm7 RNA binding motif protein 7 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); pre-mRNA intronic binding (ortholog); RNA binding (ortholog); INVOLVED IN snRNA catabolic process (ortholog); ASSOCIATED WITH lung non-small cell carcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 8 42990114 42996604 - 30032202 116906871 MODEL JAAIVD010000027;XM_032909780;XM_032909782;XM_032909783 XP_032765671;XP_032765673;XP_032765674 RNA-binding protein 7 protein-coding 625838958 LOC116898364 pescadillo homolog 4 59404012 59427816 - 116898364 MODEL JAAIVD010000003 pseudo 625838959 LOC116893653 mortality factor 4-like protein 1 2 11025403 11026130 - 30032202 116893653 MODEL JAAIVD010000001;XM_032895370 XP_032751261 protein-coding 625838963 Zbp1 Z-DNA binding protein 1 ENCODES a protein that exhibits DNA binding (ortholog); double-stranded RNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); antiviral innate immune response (ortholog); defense response to fungus (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 5 144773566 144781390 + 22301074;30032202 116900749 MODEL JAAIVD010000023;XM_032902455 XP_032758346 Z-DNA-binding protein 1 protein-coding 625838971 LOC116889948 zinc finger protein 844-like 1 247605182 247606123 + 116889948 MODEL JAAIVD010000025;XM_032890755 XP_032746646 protein-coding 625838976 Ckap4 cytoskeleton associated protein 4 ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); lipid droplet (ortholog); rough endoplasmic reticulum (ortholog) 1 163914425 163922720 + 30032202 116907483 MODEL JAAIVD010000025;XM_032910474 XP_032766365 cytoskeleton-associated protein 4 protein-coding 625838981 LOC116905235 disintegrin and metalloproteinase domain-containing protein 21-like 7 95631309 95633856 - 22301074;30032202 116905235 MODEL JAAIVD010000026;XM_032908060 XP_032763951 protein-coding 625838986 LOC116912103 up-regulator of cell proliferation 11 74677294 74721135 - 22301074 116912103 MODEL JAAIVD010000006;XM_032915998;XM_032915999;XM_032916000 XP_032771889;XP_032771890;XP_032771891 protein-coding 625839000 Mettl1 methyltransferase 1, tRNA methylguanosine ENCODES a protein that exhibits internal mRNA (guanine-N7-)-methyltransferase activity (ortholog); tRNA (guanine(46)-N7)-methyltransferase activity (ortholog); INVOLVED IN cellular response to stress (ortholog); RNA (guanine-N7)-methylation (ortholog); tRNA (guanine-N7)-methylation (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); tRNA (m7G46) methyltransferase complex (ortholog) 1 205471714 205476052 + 22301074;30032202 116909767 MODEL JAAIVD010000025;XM_032913458;XM_032913467 XP_032769349;XP_032769358 methyltransferase like 1;tRNA (guanine-N(7)-)-methyltransferase protein-coding 625839013 Nxnl2 nucleoredoxin like 2 INVOLVED IN sensory perception of smell (ortholog); visual perception (ortholog) 14 69564480 69568818 + 30032202 116883663 MODEL JAAIVD010000009;XM_032884859 XP_032740750 nucleoredoxin-like protein 2 protein-coding 625839018 LOC116905697 high mobility group protein B1-like 1 35599558 35600199 - 116905697 MODEL JAAIVD010000025 pseudo 625839019 LOC116897546 small nucleolar RNA SNORA17 3 221235359 221235490 + 116897546 MODEL JAAIVD010000012;XR_004387560 snorna 625839022 Rnpc3 RNA binding region (RNP1, RRM) containing 3 ASSOCIATED WITH combined or isolated pituitary growth hormone deficiency 7 (ortholog); genetic disease (ortholog); isolated growth hormone deficiency (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); U12-type spliceosomal complex (ortholog) 3 45905513 45928547 + 22301074;30032202 116896344 MODEL JAAIVD010000012;XM_032897446 XP_032753337 RNA-binding region-containing protein 3 protein-coding 625839040 Chd6 chromodomain helicase DNA binding protein 6 ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); transcription coregulator binding (ortholog); INVOLVED IN cell redox homeostasis (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN nuclear factor, erythroid 2 like 2 signaling pathway; ASSOCIATED WITH neuroblastoma (ortholog); Prostatic Neoplasms (ortholog); transitional cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) 5 140234934 140348593 - 22301074 116902253 MODEL JAAIVD010000023;XM_032904670;XM_032904672;XM_032904673 XP_032760561;XP_032760563;XP_032760564 chromodomain-helicase-DNA-binding protein 6 protein-coding 625839085 Trnav-uac transfer RNA valine (anticodon UAC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 12105605 12105677 + 116895153 MODEL JAAIVD010000001 trna 625839086 Dnaja1 DnaJ heat shock protein family (Hsp40) member A1 ENCODES a protein that exhibits ATPase activator activity (ortholog); C3HC4-type RING finger domain binding (ortholog); G protein-coupled receptor binding (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); flagellated sperm motility (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH galactosemia (ortholog); mouth disease (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); microtubule cytoskeleton (ortholog) 1 117501746 117511282 - 22301074;30032202 116902591 MODEL JAAIVD010000025;XM_032905033;XM_032905034 XP_032760924;XP_032760925 dnaJ homolog subfamily A member 1 protein-coding 625839104 Tex261 testis expressed 261 INVOLVED IN positive regulation of apoptotic process (ortholog) 6 62471448 62478325 + 22301074;30032202 116903597 MODEL JAAIVD010000024;XM_032906238;XM_032906240 XP_032762129;XP_032762131 protein TEX261 protein-coding 625839116 LOC116894677 non-histone chromosomal protein HMG-17-like 1 73757660 73757987 - 116894677 MODEL JAAIVD010000025 pseudo 625839117 Defb124 defensin beta 124 INVOLVED IN canonical NF-kappaB signal transduction (ortholog); cellular response to peptidoglycan (ortholog); positive regulation of chemokine (C-C motif) ligand 5 production (ortholog) 5 131952045 131953002 - 22301074;30032202 116900702 MODEL JAAIVD010000023;XM_032902405 XP_032758296 beta-defensin 124 protein-coding 625839123 Cfap251 cilia and flagella associated protein 251 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH Asthenozoospermia (ortholog); spermatogenic failure 18 (ortholog); spermatogenic failure 33 (ortholog); FOUND IN sperm end piece (ortholog); sperm flagellum (ortholog); sperm midpiece (ortholog) 16 30524049 30593216 - 22301074;30032202 116885436 MODEL JAAIVD010000004;XM_032886720 XP_032742611 cilia- and flagella-associated protein 251 protein-coding 625839147 LOC116910294 60S ribosomal protein L15-like 9 46377449 46378070 + 116910294 MODEL JAAIVD010000002 pseudo 625839148 Mrps18c mitochondrial ribosomal protein S18C FOUND IN mitochondrial small ribosomal subunit (ortholog); mitochondrion (ortholog) 11 11022860 11028879 + 22301074;30032202 116912145 MODEL JAAIVD010000006;XM_032916060 XP_032771951 28S ribosomal protein S18c, mitochondrial protein-coding 625839158 Ptpre protein tyrosine phosphatase receptor type E ENCODES a protein that exhibits identical protein binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN cell surface receptor protein tyrosine phosphatase signaling pathway (ortholog); negative regulation of insulin receptor signaling pathway (ortholog); regulation of mast cell activation (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog) 2 66236783 66277941 - 22301074 116891379 MODEL JAAIVD010000001;XM_032892391;XM_032892392;XM_032892393 XP_032748282;XP_032748283;XP_032748284 receptor-type tyrosine-protein phosphatase epsilon protein-coding 625839189 Znf367 zinc finger protein 367 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH castration-resistant prostate carcinoma (ortholog); Colorectal Neoplasms (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 14 75398245 75417631 + 30032202 116883627 MODEL JAAIVD010000009;XM_032884815;XM_032884816 XP_032740706;XP_032740707 protein-coding 625839201 LOC116907428 olfactory receptor 7G2-like 8 15782681 15783653 + 22301074;30032202 116907428 MODEL JAAIVD010000027;XM_032910396 XP_032766287 protein-coding 625839206 LOC116906220 Ig heavy chain V region 186-1-like 7 121566462 121566933 - 116906220 MODEL JAAIVD010000026 pseudo 625839207 Cntln centlein ENCODES a protein that exhibits protein domain specific binding (ortholog); protein kinase binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN centriole-centriole cohesion (ortholog); intracellular protein localization (ortholog); protein-containing complex assembly (ortholog); ASSOCIATED WITH amenorrhea (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); cytoplasm (ortholog) 1 68788052 69041193 - 30032202 116900547 MODEL JAAIVD010000025;XM_032902276 XP_032758167 protein-coding 625839237 Haus6 HAUS augmin like complex subunit 6 INVOLVED IN centrosome cycle (ortholog); spindle assembly (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); Ovarian Neoplasms (ortholog); FOUND IN centrosome (ortholog); HAUS complex (ortholog); mitotic spindle microtubule (ortholog) 1 67374389 67408613 + 30032202 116900517 MODEL JAAIVD010000025;XM_032902249 XP_032758140 HAUS augmin-like complex subunit 6 protein-coding 625839258 LOC116890394 U6 spliceosomal RNA 1 54739538 54739636 + 116890394 MODEL JAAIVD010000025 pseudo 625839259 Snrk SNF related kinase ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN protein phosphorylation (ortholog); FOUND IN nucleus (ortholog) 8 113276666 113330694 + 22301074;30032202 116907990 MODEL JAAIVD010000027;XM_032911237;XM_032911238;XM_032911239;XM_032911240;XM_032911241 XP_032767128;XP_032767129;XP_032767130;XP_032767131;XP_032767132 SNF-related serine/threonine-protein kinase protein-coding 625839279 S1pr3 sphingosine-1-phosphate receptor 3 ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); inflammatory response (ortholog); negative regulation of establishment of endothelial barrier (ortholog); PARTICIPATES IN sphingosine 1-phosphate signaling pathway; FOUND IN plasma membrane (ortholog); presynapse (ortholog) 14 69795980 69809233 + 22301074 116883824 MODEL JAAIVD010000009;XM_032885078 XP_032740969 sphingosine 1-phosphate receptor 3 protein-coding 625839285 LOC116886676 zinc finger CCCH-type antiviral protein 1-like 17 14749063 14750580 - 116886676 MODEL JAAIVD010000011 pseudo 625839286 LOC116906432 U1 spliceosomal RNA 7 68092745 68092911 - 116906432 MODEL JAAIVD010000026;XR_004388693 snrna 625839289 LOC116888132 fumarate hydratase, mitochondrial-like X 105888099 105889503 - 116888132 MODEL JAAIVD010000014 pseudo 625839290 LOC116889770 uncharacterized LOC116889770 116889770 MODEL JAAIVD010000242;XR_004386507 ncrna 625839291 Erf ETS2 repressor factor ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN chorio-allantoic fusion (ortholog); ectodermal cell differentiation (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH Arnold-Chiari Malformation (ortholog); brain disease (ortholog); CHITAYAT SYNDROME (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 169463375 169471826 + 22301074;30032202 116892466 MODEL JAAIVD010000001;XM_032894182 XP_032750073 ETS domain-containing transcription factor ERF protein-coding 625839299 Crtc1 CREB regulated transcription coactivator 1 ENCODES a protein that exhibits cAMP response element binding protein binding (ortholog); INVOLVED IN energy homeostasis (ortholog); entrainment of circadian clock by photoperiod (ortholog); memory (ortholog); ASSOCIATED WITH esophagus adenocarcinoma (ortholog); major depressive disorder (ortholog); middle cerebral artery infarction (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) 13 12639690 12695535 - 22301074;30032202 116914260 MODEL JAAIVD010000008;XM_032918472;XM_032918473 XP_032774363;XP_032774364 CREB-regulated transcription coactivator 1 protein-coding 625839320 Slc2a8 solute carrier family 2 member 8 ENCODES a protein that exhibits D-glucose binding (ortholog); D-glucose transmembrane transporter activity (ortholog); dehydroascorbic acid transmembrane transporter activity (ortholog); INVOLVED IN D-glucose transmembrane transport (ortholog); dehydroascorbic acid transport (ortholog); fructose transmembrane transport (ortholog); FOUND IN plasma membrane (ortholog); synaptic vesicle (ortholog) 5 2649659 2658598 + 22301074 116901126 MODEL JAAIVD010000023;XM_032902715;XM_032902717;XM_032902718 XP_032758606;XP_032758608;XP_032758609 solute carrier family 2, facilitated glucose transporter member 8 protein-coding 625839338 LOC116903648 60S ribosomal protein L10a-like 6 156341720 156352217 + 116903648 MODEL JAAIVD010000024 pseudo 625839339 Gnat2 G protein subunit alpha transducin 2 INVOLVED IN background adaptation (ortholog); camera-type eye development (ortholog); cell morphogenesis (ortholog); PARTICIPATES IN visual phototransduction pathway; ASSOCIATED WITH achromatopsia (ortholog); achromatopsia 4 (ortholog); color blindness (ortholog); FOUND IN photoreceptor inner segment (ortholog); photoreceptor outer segment (ortholog); synapse (ortholog) 3 50156459 50166111 - 22301074;30032202 116896372 MODEL JAAIVD010000012;XM_032897492 XP_032753383 guanine nucleotide-binding protein G(t) subunit alpha-2 protein-coding 625839351 LOC116885616 40S ribosomal protein S13-like 16 18468710 18469165 + 22301074;30032202 116885616 MODEL JAAIVD010000004;XM_032886915 XP_032742806 protein-coding 625839354 LOC116907210 olfactory receptor 10G9 8 82813257 82814192 - 22301074 116907210 MODEL JAAIVD010000027;XM_032910179 XP_032766070 protein-coding 625839357 LOC116899854 small nucleolar RNA SNORA17 4 132208732 132208859 + 116899854 MODEL JAAIVD010000003;XR_004387850 snorna 625839360 Wdr88 WD repeat domain 88 2 163400860 163439947 + 22301074 116893362 MODEL JAAIVD010000001;XM_032895164 XP_032751055 WD repeat-containing protein 88 protein-coding 625839376 LOC116888134 40S ribosomal protein S29-like 1 70390687 70390857 + 116888134 MODEL JAAIVD010000025 pseudo 625839377 Krt10 keratin 10 ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); protein heterodimerization activity (ortholog); structural constituent of skin epidermis (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); cornification (ortholog); epidermis development (ortholog); ASSOCIATED WITH Annular Epidermolytic Ichthyosis (ortholog); Annular Epidermolytic Ichthyosis 1 (ortholog); Arsenic Poisoning (ortholog); FOUND IN cornified envelope (ortholog); cytoplasm (ortholog); keratin filament (ortholog) 9 55057397 55061912 + 30032202 116909681 MODEL JAAIVD010000002;XM_032913340 XP_032769231 keratin, type I cytoskeletal 10 protein-coding 625839389 Arhgap45 Rho GTPase activating protein 45 ASSOCIATED WITH disease of cellular proliferation (ortholog); pre-eclampsia (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) 1 154843813 154859016 - 22301074;30032202 116905444 MODEL JAAIVD010000025;XM_032908392;XM_032908400;XM_032908409 XP_032764283;XP_032764291;XP_032764300 rho GTPase-activating protein 45 protein-coding 625839421 LOC116906446 small nucleolar RNA SNORA17 7 79141286 79141414 - 116906446 MODEL JAAIVD010000026;XR_004388704 snorna 625839424 LOC116911289 60S ribosomal protein L22-like 1 223048003 223053718 + 116911289 MODEL JAAIVD010000025 pseudo 625839425 LOC116898628 RIMS-binding protein 3 4 2484697 2489921 + 22301074;30032202 116898628 MODEL JAAIVD010000003;XM_032899842 XP_032755733 protein-coding 625839429 LOC116883985 zinc finger CCCH domain-containing protein 15-like 14 41574536 41575821 - 22301074;30032202 116883985 MODEL JAAIVD010000009;XM_032885220 XP_032741111 protein-coding 625839433 Trnak-cuu transfer RNA lysine (anticodon CUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60869111 60869183 - 116897687 MODEL JAAIVD010000012 trna 625839434 LOC116903314 heat shock cognate 71 kDa protein-like 6 24931086 24933199 + 22301074;30032202 116903314 MODEL JAAIVD010000024;XM_032905749 XP_032761640 protein-coding 625839439 Proc protein C, inactivator of coagulation factors Va and VIIIa ENCODES a protein that exhibits identical protein binding (ortholog); oligopeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN liver development (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of blood coagulation (ortholog); PARTICIPATES IN coagulation cascade pathway; protease mediated signaling via protease-activated receptor 1; protein C anticoagulant pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog); Golgi apparatus (ortholog) 15 12095696 12107547 + 22301074;30032202 116884558 MODEL JAAIVD010000010;XM_032885699 XP_032741590 vitamin K-dependent protein C protein-coding 625839452 Wrnip1 WRN helicase interacting protein 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); identical protein binding (ortholog); INVOLVED IN DNA synthesis involved in DNA repair (ortholog); regulation of DNA-templated DNA replication initiation (ortholog); FOUND IN chromosome, telomeric region (ortholog); nucleus (ortholog); perinuclear region of cytoplasm (ortholog) 14 51834756 51854732 + 22301074;30032202 116883447 MODEL JAAIVD010000009;XM_032884594 XP_032740485 ATPase WRNIP1 protein-coding 625839463 Zdhhc9 zDHHC palmitoyltransferase 9 ENCODES a protein that exhibits palmitoyltransferase activity (ortholog); protein-cysteine S-palmitoyltransferase activity (ortholog); Ras palmitoyltransferase activity (ortholog); INVOLVED IN peptidyl-L-cysteine S-palmitoylation (ortholog); positive regulation of cGAS/STING signaling pathway (ortholog); positive regulation of pyroptotic inflammatory response (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) X 110201898 110237261 + 30032202 116888429 MODEL JAAIVD010000014;XM_032889704;XM_032889705 XP_032745595;XP_032745596 palmitoyltransferase ZDHHC9;zinc finger DHHC-type palmitoyltransferase 9 protein-coding 625839480 LOC116912713 cytochrome c oxidase subunit 7B2, mitochondrial INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog) 11 28271362 28339542 - 22301074;30032202 116912713 MODEL JAAIVD010000006;XM_032916840 XP_032772731 protein-coding 625839486 LOC116914951 ral guanine nucleotide dissociation stimulator-like 13 11833341 11835370 + 116914951 MODEL JAAIVD010000008 pseudo 625839487 LOC116889039 uncharacterized LOC116889039 X 19888501 19890783 + 30032202 116889039 MODEL JAAIVD010000014;XM_032890234 XP_032746125 uncharacterized protein LOC116889039 protein-coding 625839491 LOC116893499 vomeronasal type-2 receptor 116-like 2 184934201 184947781 + 116893499 MODEL JAAIVD010000001 pseudo 625839492 LOC116902998 KH homology domain-containing protein 1-like 6 102115549 102115965 - 22301074;30032202 116902998 MODEL JAAIVD010000024;XM_032905311 XP_032761202 protein-coding 625839495 Pitpnm1 phosphatidylinositol transfer protein membrane associated 1 ENCODES a protein that exhibits calcium ion binding (ortholog); phosphatidic acid binding (ortholog); phosphatidylcholine binding (ortholog); INVOLVED IN 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate metabolic process (ortholog); phospholipid transport (ortholog); positive regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN cell body (ortholog); cytosol (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog) 2 3528061 3541694 - 22301074;30032202 116890788 MODEL JAAIVD010000001;XM_032891259;XM_032891260;XM_032891261 XP_032747150;XP_032747151;XP_032747152 membrane-associated phosphatidylinositol transfer protein 1 protein-coding 625839527 LOC116899146 obg-like ATPase 1 1 102992142 102992923 + 116899146 MODEL JAAIVD010000025 pseudo 625839528 LOC116896080 60S ribosomal protein L19-like 3 214124629 214129420 - 116896080 MODEL JAAIVD010000012 pseudo 625839529 Kdr kinase insert domain receptor ENCODES a protein that exhibits cadherin binding (ortholog); coreceptor activity (ortholog); growth factor binding (ortholog); INVOLVED IN branching involved in blood vessel morphogenesis (ortholog); branching morphogenesis of an epithelial tube (ortholog); calcium ion homeostasis (ortholog); PARTICIPATES IN altered vascular endothelial growth factor signaling pathway involving proteins affecting its expression; altered vascular endothelial growth factor signaling pathway involving the main players; axitinib pharmacodynamics pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); adenocarcinoma (ortholog); adhesions of uterus (ortholog); FOUND IN cell junction (ortholog); cell periphery (ortholog); cell surface (ortholog) 11 32697838 32740235 - 22301074;30032202 116912596 MODEL JAAIVD010000006;XM_032916717 XP_032772608 vascular endothelial growth factor receptor 2 protein-coding 625839563 Vgll4 vestigial like family member 4 INVOLVED IN negative regulation of cardiac muscle cell proliferation (ortholog); negative regulation of cell growth (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN nucleus (ortholog) 6 31736278 31807142 + 30032202 116903391 MODEL JAAIVD010000024;XM_032905888;XM_032905889 XP_032761779;XP_032761780 transcription cofactor vestigial-like protein 4 protein-coding 625839575 LOC116889646 adenosine kinase-like 22301074 116889646 MODEL JAAIVD010000041;XM_032890551 XP_032746442 protein-coding 625839576 LOC116892947 zinc finger protein 260-like 1 13038316 13066957 + 30032202 116892947 MODEL JAAIVD010000025;XM_032894900 XP_032750791 protein-coding 625839583 LOC116884601 O-acyltransferase like protein 15 65520889 65573190 - 22301074 116884601 MODEL JAAIVD010000010;XM_032885741 XP_032741632 protein-coding 625839602 LOC116909550 uncharacterized LOC116909550 9 41845950 41852387 - 116909550 MODEL JAAIVD010000002;XR_004389080 ncrna 625839607 Dsg3 desmoglein 3 ENCODES a protein that exhibits protein dimerization activity (ortholog); INVOLVED IN actin filament organization (ortholog); adherens junction assembly (ortholog); cell-cell adhesion (ortholog); ASSOCIATED WITH BLISTERING, ACANTHOLYTIC, OF ORAL AND LARYNGEAL MUCOSA (ortholog); pemphigus vulgaris (ortholog); FOUND IN cell junction (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) 15 23114486 23144874 - 22301074;30032202 116884544 MODEL JAAIVD010000010;XM_032885681;XM_032885682 XP_032741572;XP_032741573 desmoglein-3 protein-coding 625839629 LOC116899964 E3 SUMO-protein ligase PIAS2-like 5 71813090 71814189 + 116899964 MODEL JAAIVD010000023 pseudo 625839630 LOC116898270 olfactory receptor 6B2-like 4 164456220 164457155 - 22301074 116898270 MODEL JAAIVD010000003;XM_032899622 XP_032755513 protein-coding 625839633 Ccdc106 coiled-coil domain containing 106 FOUND IN nucleoplasm (ortholog) 2 177634911 177639499 + 30032202 116892685 MODEL JAAIVD010000001;XM_032894534;XM_032894535;XM_032894536;XM_032894537;XM_032894538;XM_032894539;XM_032894540;XM_032894541 XP_032750425;XP_032750426;XP_032750427;XP_032750428;XP_032750429;XP_032750430;XP_032750431;XP_032750432 coiled-coil domain-containing protein 106 protein-coding 625839664 LOC116889307 synaptobrevin homolog YKT6-like X 38438930 38439496 + 116889307 MODEL JAAIVD010000014 pseudo 625839665 LOC116913170 coiled-coil-helix-coiled-coil-helix domain-containing protein 2-like 12 51935629 51936128 - 116913170 MODEL JAAIVD010000007 pseudo 625839666 Trnam-cau transfer RNA methionine (anticodon CAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41781488 41781559 + 116884217 MODEL JAAIVD010000009 trna 625839667 LOC116904650 U6 spliceosomal RNA 6 15711326 15711431 - 116904650 MODEL JAAIVD010000024;XR_004388353 snrna 625839670 Irak2 interleukin 1 receptor associated kinase 2 ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); interleukin-1-mediated signaling pathway (ortholog); lipopolysaccharide-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; Toll-like receptor signaling pathway 6 32841469 32898597 - 22301074;30032202 116903401 MODEL JAAIVD010000024;XM_032905912 XP_032761803 interleukin-1 receptor-associated kinase-like 2 protein-coding 625839687 LOC116888070 transformer-2 protein homolog beta-like X 89041694 89042403 - 116888070 MODEL JAAIVD010000014 pseudo 625839688 LOC116910902 platelet-activating factor acetylhydrolase IB subunit gamma-like 10 47254347 47254971 - 116910902 MODEL JAAIVD010000005 pseudo 625839689 LOC116911033 uncharacterized LOC116911033 10 40326378 40327893 + 116911033 MODEL JAAIVD010000005;XR_004389303;XR_004389304;XR_004389305 ncrna 625839699 Ccdc14 coiled-coil domain containing 14 INVOLVED IN protein localization to centrosome (ortholog); substantia nigra development (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog) 4 19470240 19504658 + 30032202 116898801 MODEL JAAIVD010000003;XM_032900151 XP_032756042 coiled-coil domain-containing protein 14 protein-coding 625839716 Tmbim4 transmembrane BAX inhibitor motif containing 4 INVOLVED IN locomotory behavior (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of neuron apoptotic process (ortholog); ASSOCIATED WITH ovarian cyst (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog); Golgi stack (ortholog) 1 198185541 198200747 + 30032202 116909427 MODEL JAAIVD010000025;XM_032913005 XP_032768896 protein lifeguard 4 protein-coding 625839727 Spata45 spermatogenesis associated 45 10 69124863 69130624 + 116911504 MODEL JAAIVD010000005;XM_032915491 XP_032771382 spermatogenesis-associated protein 45 protein-coding 625839734 LOC116898926 programmed cell death protein 7-like 4 46421884 46427000 + 116898926 MODEL JAAIVD010000003 pseudo 625839735 Tacc2 transforming acidic coiled-coil containing protein 2 ENCODES a protein that exhibits nuclear receptor binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN astral microtubule organization (ortholog); cell population proliferation (ortholog); cerebral cortex development (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 2 71320382 71511691 - 30032202 116891420 MODEL JAAIVD010000001;XM_032892446;XM_032892447;XM_032892449;XM_032892450;XM_032892451;XM_032892452;XM_032892453;XM_032892454;XM_032892455 XP_032748337;XP_032748338;XP_032748340;XP_032748341;XP_032748342;XP_032748343;XP_032748344;XP_032748345;XP_032748346 transforming acidic coiled-coil-containing protein 2 protein-coding 625839782 Trnap-agg transfer RNA proline (anticodon AGG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 110176329 110176400 - 116904859 MODEL JAAIVD010000024 trna 625839783 LOC116897394 U6 spliceosomal RNA 3 52052864 52052970 + 116897394 MODEL JAAIVD010000012;XR_004387438 snrna 625839786 Ube2f ubiquitin conjugating enzyme E2 F (putative) ENCODES a protein that exhibits NEDD8 conjugating enzyme activity (ortholog); NEDD8 transferase activity (ortholog); INVOLVED IN protein neddylation (ortholog) 4 163251524 163286835 + 30032202 116899635 MODEL JAAIVD010000003;XM_032901623;XM_032901624;XM_032901626;XM_032901627 XP_032757514;XP_032757515;XP_032757517;XP_032757518 NEDD8-conjugating enzyme UBE2F protein-coding 625839807 LOC116903436 regenerating islet-derived protein 3-gamma 6 37614872 37617146 - 30032202 116903436 MODEL JAAIVD010000024;XM_032905989 XP_032761880 protein-coding 625839816 Mcts1 MCTS1 re-initiation and release factor ENCODES a protein that exhibits ribosomal small subunit binding (ortholog); RNA cap binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN formation of translation preinitiation complex (ortholog); IRES-dependent viral translational initiation (ortholog); ribosome disassembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); immunodeficiency 118 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) X 101771315 101781386 - 22301074;30032202 116889394 MODEL JAAIVD010000014;XM_032890496;XM_032890497;XM_032890498 XP_032746387;XP_032746388;XP_032746389 malignant T-cell-amplified sequence 1 protein-coding 625839832 Nhej1 non-homologous end joining factor 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA end binding (ortholog); DNA polymerase binding (ortholog); INVOLVED IN B cell differentiation (ortholog); double-strand break repair via nonhomologous end joining (ortholog); immunoglobulin V(D)J recombination (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH choroid disease (ortholog); genetic disease (ortholog); Microphthalmia/Coloboma 13 (ortholog); FOUND IN DNA-dependent protein kinase-DNA ligase 4 complex (ortholog); fibrillar center (ortholog); nonhomologous end joining complex (ortholog) 4 148387911 148485324 - 22301074;30032202 116899520 MODEL JAAIVD010000003;XM_032901378 XP_032757269 non-homologous end-joining factor 1 protein-coding 625839845 Gtf3c2 general transcription factor IIIC subunit 2 ENCODES a protein that exhibits DNA binding (ortholog); RNA polymerase III general transcription initiation factor activity (ortholog); INVOLVED IN transcription by RNA polymerase III (ortholog); transcription initiation at RNA polymerase III promoter (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription factor TFIIIC complex (ortholog) 7 22906713 22931044 + 22301074;30032202 116905981 MODEL JAAIVD010000026;XM_032908992;XM_032908993;XM_032908995;XM_032908996;XM_032908997;XM_032908998 XP_032764883;XP_032764884;XP_032764886;XP_032764887;XP_032764888;XP_032764889 general transcription factor 3C polypeptide 2 protein-coding 625839881 LOC116905884 60S ribosomal protein L19-like 7 117639237 117639773 - 22301074;30032202 116905884 MODEL JAAIVD010000026;XM_032908874 XP_032764765 protein-coding 625839884 LOC116892566 destrin-like 2 171813334 171813856 - 116892566 MODEL JAAIVD010000001 pseudo 625839885 LOC116889876 40S ribosomal protein S15-like 1 156008438 156008844 - 22301074;30032202 116889876 MODEL JAAIVD010000025;XM_032890701 XP_032746592 protein-coding 625839890 LOC116894387 olfactory receptor 13A1-like 2 156836658 156837608 - 22301074 116894387 MODEL JAAIVD010000001;XM_032896093 XP_032751984 protein-coding 625839894 LOC116890575 small nucleolar RNA SNORA17 1 102020108 102020232 + 116890575 MODEL JAAIVD010000025 pseudo 625839895 Trim37 tripartite motif containing 37 ENCODES a protein that exhibits chromatin binding (ortholog); histone H2AK119 ubiquitin ligase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN aggresome assembly (ortholog); negative regulation of centriole replication (ortholog); negative regulation of gene expression, epigenetic (ortholog); ASSOCIATED WITH Craniofacial Abnormalities (ortholog); Dwarfism (ortholog); Fibrous Dysplasia of Bone (ortholog); FOUND IN aggresome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 83519659 83661336 - 22301074;30032202 116908620 MODEL JAAIVD010000002;XM_032911859;XM_032911860;XM_032911861;XM_032911862;XM_032911863;XM_032911865;XM_032911866;XM_032911867;XR_004389001;XR_004389002;XR_004389003 XP_032767750;XP_032767751;XP_032767752;XP_032767753;XP_032767754;XP_032767756;XP_032767757;XP_032767758 E3 ubiquitin-protein ligase TRIM37 protein-coding 625839954 LOC116894511 vomeronasal type-1 receptor 4-like 2 173785320 173786267 - 22301074;30032202 116894511 MODEL JAAIVD010000001;XM_032896213 XP_032752104 protein-coding 625839957 LOC116911266 60S ribosomal protein L17-like 10 56694237 56694853 - 22301074;30032202 116911266 MODEL JAAIVD010000005;XM_032915172 XP_032771063 protein-coding 625839962 Gpr84 G protein-coupled receptor 84 FOUND IN signaling receptor complex (ortholog) 1 259772899 259775045 + 22301074;30032202 116890184 MODEL JAAIVD010000025;XM_032890919;XM_032890920 XP_032746810;XP_032746811 G-protein coupled receptor 84 protein-coding 625839971 LOC116894905 small nucleolar RNA SNORA73 family 2 108475893 108476019 + 116894905 MODEL JAAIVD010000001;XR_004387107 snorna 625839974 LOC116911508 olfactory receptor 6K3-like 10 52810713 52811669 + 22301074 116911508 MODEL JAAIVD010000005;XM_032915495 XP_032771386 protein-coding 625839978 LOC116893711 olfactory receptor 5B3-like 2 13422892 13423809 + 22301074;30032202 116893711 MODEL JAAIVD010000001;XM_032895428 XP_032751319 protein-coding 625839982 LOC116900296 olfactory receptor 8K3-like 5 63678915 63679856 - 22301074;30032202 116900296 MODEL JAAIVD010000023;XM_032902051 XP_032757942 protein-coding 625839985 Cdkn2aip CDKN2A interacting protein ENCODES a protein that exhibits p53 binding (ortholog); INVOLVED IN DNA damage response (ortholog); negative regulation of cell growth (ortholog); positive regulation of cell growth (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN granular component (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 13 40313005 40318232 + 30032202 116914551 MODEL JAAIVD010000008;XM_032918900;XM_032918901 XP_032774791;XP_032774792 CDKN2A-interacting protein protein-coding 625839997 Camk2a calcium/calmodulin dependent protein kinase II alpha ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); calmodulin binding (ortholog); glutamate receptor binding (ortholog); INVOLVED IN angiotensin-activated signaling pathway (ortholog); calcium ion transport (ortholog); cellular response to interferon-beta (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; fibroblast growth factor signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Alzheimer's disease (ortholog); autism spectrum disorder (ortholog); FOUND IN axon (ortholog); calcium- and calmodulin-dependent protein kinase complex (ortholog); dendrite (ortholog) 15 70959958 71023712 - 22301074;30032202 116884968 MODEL JAAIVD010000010;XM_032886176 XP_032742067 calcium/calmodulin-dependent protein kinase type II subunit alpha protein-coding 625840019 LOC116889315 mitochondrial intermembrane space import and assembly protein 40-like X 51885896 51886756 + 30032202 116889315 MODEL JAAIVD010000014;XM_032890441 XP_032746332 protein-coding 625840022 LOC116904305 60S ribosomal protein L23a-like 6 49513352 49520018 + 116904305 MODEL JAAIVD010000024 pseudo 625840023 LOC116907017 baculoviral IAP repeat-containing protein 3 8 4048952 4076232 - 22301074;30032202 116907017 MODEL JAAIVD010000027;XM_032909952;XM_032909953;XM_032909954;XM_032909955 XP_032765843;XP_032765844;XP_032765845;XP_032765846 protein-coding 625840045 LOC116899551 cytochrome c, somatic-like 4 152811271 152813150 - 116899551 MODEL JAAIVD010000003 pseudo 625840046 LOC116914167 U6 spliceosomal RNA 12 38494729 38494835 - 116914167 MODEL JAAIVD010000007;XR_004389712 snrna 625840049 Psmb7 proteasome 20S subunit beta 7 ENCODES a protein that exhibits threonine-type endopeptidase activity (ortholog); INVOLVED IN proteasomal protein catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); regulation of proteasomal protein catabolic process (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); coat/hair pigmentation trait (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) 5 16358787 16417261 - 22301074 116901366 MODEL JAAIVD010000023;XM_032903228 XP_032759119 proteasome subunit beta type-7 protein-coding 625840061 LOC116898075 uncharacterized protein C9orf40 homolog 4 90359407 90359901 - 116898075 MODEL JAAIVD010000003 pseudo 625840062 Eps15 epidermal growth factor receptor pathway substrate 15 ENCODES a protein that exhibits identical protein binding (ortholog); polyubiquitin modification-dependent protein binding (ortholog); ubiquitin binding (ortholog); INVOLVED IN clathrin coat assembly (ortholog); endocytic recycling (ortholog); Golgi to endosome transport (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; Notch signaling pathway; FOUND IN aggresome (ortholog); AP-2 adaptor complex (ortholog); apical plasma membrane (ortholog) 1 45472958 45572794 - 22301074;30032202 116898979 MODEL JAAIVD010000025;XM_032900408 XP_032756299 epidermal growth factor receptor substrate 15 protein-coding 625840091 LOC116883697 probable G-protein coupled receptor 141 14 38482029 38482928 - 22301074;30032202 116883697 MODEL JAAIVD010000009;XM_032884910 XP_032740801 protein-coding 625840094 LOC116905092 60S ribosomal protein L21-like 7 124050876 124051356 - 116905092 MODEL JAAIVD010000026 pseudo 625840095 LOC116908344 U7 small nuclear RNA 8 44744954 44745013 - 116908344 MODEL JAAIVD010000027;XR_004388895 snrna 625840098 LOC116894861 U6 spliceosomal RNA 2 206548532 206548638 + 116894861 MODEL JAAIVD010000001;XR_004387075 snrna 625840101 LOC116900591 high mobility group protein B4-like 5 94595334 94595880 + 116900591 MODEL JAAIVD010000023 pseudo 625840102 LOC116883308 olfactory receptor 14A16-like 14 74504383 74505330 - 22301074;30032202 116883308 MODEL JAAIVD010000009;XM_032884362 XP_032740253 protein-coding 625840105 LOC116898697 EEF1AKMT4-ECE2 readthrough transcript protein ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); INVOLVED IN peptide hormone processing (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog) 4 5436309 5472018 + 22301074;30032202 116898697 MODEL JAAIVD010000003;XM_032899959;XM_032899961 XP_032755850;XP_032755852 EEF1A lysine methyltransferase 4 protein-coding 625840131 LOC116904607 murinoglobulin-1 6 24959100 25009014 - 22301074;30032202 116904607 MODEL JAAIVD010000024;XM_032907403 XP_032763294 protein-coding 625840171 LOC116902349 protein BEX4-like 1 128521382 128571879 + 30032202 116902349 MODEL JAAIVD010000025;XM_032904877 XP_032760768 protein-coding 625840175 LOC116900373 olfactory receptor 5W2-like 5 69481677 69482624 + 22301074;30032202 116900373 MODEL JAAIVD010000023;XM_032902121 XP_032758012 protein-coding 625840179 LOC116892791 vomeronasal type-2 receptor 116-like 2 186155197 186164637 + 116892791 MODEL JAAIVD010000001 pseudo 625840180 LOC116906019 transcription factor BTF3-like 7 24303492 24303973 - 116906019 MODEL JAAIVD010000026 pseudo 625840181 Grin2b glutamate ionotropic receptor NMDA type subunit 2B ENCODES a protein that exhibits beta-catenin binding (ortholog); calcium channel activity (ortholog); cell adhesion molecule binding (ortholog); INVOLVED IN action potential (ortholog); associative learning (ortholog); auditory behavior (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; excitatory synaptic transmission pathway; long term potentiation; ASSOCIATED WITH alcohol use disorder (ortholog); Alzheimer's disease (ortholog); astigmatism (ortholog); FOUND IN apical dendrite (ortholog); cell surface (ortholog); ciliary tip (ortholog) 6 13267567 13771078 + 22301074;30032202 116903157 MODEL JAAIVD010000024;XM_032905523;XM_032905524;XM_032905525 XP_032761414;XP_032761415;XP_032761416 glutamate receptor ionotropic, NMDA 2B protein-coding 625840205 Npc1 NPC intracellular cholesterol transporter 1 ENCODES a protein that exhibits cholesterol transfer activity (ortholog); INVOLVED IN adult walking behavior (ortholog); autophagy (ortholog); cellular response to low-density lipoprotein particle stimulus (ortholog); ASSOCIATED WITH Ataxia (ortholog); atherosclerosis (ortholog); brucellosis (ortholog); FOUND IN cytoplasmic side of lysosomal membrane (ortholog); endoplasmic reticulum (ortholog); endosome (ortholog) 15 31427147 31471931 + 22301074 116884258 MODEL JAAIVD010000010;XM_032885343 XP_032741234 protein-coding 625840234 LOC116898471 RCC1 and BTB domain-containing protein 1-like 4 110792543 110808683 + 116898471 MODEL JAAIVD010000003 pseudo 625840235 Appbp2 amyloid beta precursor protein binding protein 2 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN negative regulation of beige fat cell differentiation (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ubiquitin-dependent protein catabolic process via the C-end degron rule pathway (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); cytoplasmic vesicle membrane (ortholog); nucleoplasm (ortholog) 9 85487662 85527624 + 22301074;30032202 116908562 MODEL JAAIVD010000002;XM_032911766 XP_032767657 amyloid protein-binding protein 2 protein-coding 625840252 LOC116895721 ATP synthase F(0) complex subunit C2, mitochondrial-like 3 222624104 222624700 - 22301074;30032202 116895721 MODEL JAAIVD010000012;XM_032896904 XP_032752795 protein-coding 625840257 Kbtbd4 kelch repeat and BTB domain containing 4 5 65076257 65082332 + 22301074 116901602 MODEL JAAIVD010000023;XM_032903628;XM_032903629;XM_032903630 XP_032759519;XP_032759520;XP_032759521 kelch repeat and BTB domain-containing protein 4 protein-coding 625840271 Syne2 spectrin repeat containing nuclear envelope protein 2 ENCODES a protein that exhibits actin binding (ortholog); cytoskeleton-nuclear membrane anchor activity (ortholog); INVOLVED IN centrosome localization (ortholog); establishment or maintenance of cell polarity (ortholog); fibroblast migration (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); autosomal dominant Emery-Dreifuss muscular dystrophy 2 (ortholog); autosomal dominant Emery-Dreifuss muscular dystrophy 5 (ortholog); FOUND IN cytoplasm (ortholog); filopodium membrane (ortholog); focal adhesion (ortholog) 7 90016791 90284940 + 22301074 116905176 MODEL JAAIVD010000026;XM_032907953;XM_032907954 XP_032763844;XP_032763845 nesprin-2 protein-coding 625840395 LOC116886644 cytosolic purine 5'-nucleotidase-like 17 20601014 20603870 + 116886644 MODEL JAAIVD010000011 pseudo 625840396 Cdc45 cell division cycle 45 INVOLVED IN DNA replication (ortholog); ASSOCIATED WITH androgen insensitivity syndrome (ortholog); Androgen Insensitivity Syndrome due to Coactivator Deficiency (ortholog); COVID-19 (ortholog); FOUND IN ciliary basal body (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 4 4049378 4074361 - 22301074;30032202 116898677 MODEL JAAIVD010000003;XM_032899928 XP_032755819 cell division control protein 45 homolog protein-coding 625840419 LOC116885994 small nucleolar RNA SNORD102 16 7056749 7056819 - 116885994 MODEL JAAIVD010000004;XR_004386067 snorna 625840422 Chpt1 choline phosphotransferase 1 ENCODES a protein that exhibits diacylglycerol cholinephosphotransferase activity (ortholog); phosphotransferase activity, for other substituted phosphate groups (ortholog); INVOLVED IN phosphatidylcholine biosynthetic process (ortholog); platelet activating factor biosynthetic process (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; lamivudine pharmacokinetics pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) 1 167524589 167579338 - 30032202 116907758 MODEL JAAIVD010000025;XM_032910900;XM_032910907;XM_032910915;XR_004388844 XP_032766791;XP_032766798;XP_032766806 cholinephosphotransferase 1 protein-coding 625840445 Pi4k2a phosphatidylinositol 4-kinase type 2 alpha ENCODES a protein that exhibits 1-phosphatidylinositol 4-kinase activity (ortholog); AP-3 adaptor complex binding (ortholog); ATP binding (ortholog); INVOLVED IN basophil degranulation (ortholog); phosphatidylinositol biosynthetic process (ortholog); phosphatidylinositol phosphate biosynthetic process (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH NEURODEVELOPMENTAL DISORDER WITH HYPERKINETIC MOVEMENTS, SEIZURES, AND STRUCTURAL BRAIN ABNORMALITIES (ortholog); FOUND IN BLOC-1 complex (ortholog); cytoplasmic vesicle (ortholog); dendrite (ortholog) 2 41205864 41233909 + 30032202 116891174 MODEL JAAIVD010000001;XM_032891988 XP_032747879 phosphatidylinositol 4-kinase type 2-alpha protein-coding 625840458 Cacna1e calcium voltage-gated channel subunit alpha1 E ENCODES a protein that exhibits voltage-gated calcium channel activity (ortholog); voltage-gated calcium channel activity involved in regulation of presynaptic cytosolic calcium levels (ortholog); voltage-gated monoatomic cation channel activity (ortholog); INVOLVED IN behavioral fear response (ortholog); behavioral response to pain (ortholog); calcium ion import (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Coma (ortholog); developmental and epileptic encephalopathy (ortholog); developmental and epileptic encephalopathy 69 (ortholog); FOUND IN GABA-ergic synapse (ortholog); neuronal cell body (ortholog); perikaryon (ortholog) 10 33842224 34146488 - 22301074;30032202 116910875 MODEL JAAIVD010000005;XM_032914632;XM_032914633;XM_032914634;XM_032914635;XM_032914636;XM_032914637;XM_032914638;XM_032914640 XP_032770523;XP_032770524;XP_032770525;XP_032770526;XP_032770527;XP_032770528;XP_032770529;XP_032770531 voltage-dependent R-type calcium channel subunit alpha-1E protein-coding 625840523 LOC116899397 uncharacterized LOC116899397 4 130285563 130310492 + 116899397 MODEL JAAIVD010000003;XR_004387727 ncrna 625840528 LOC116894066 GTPase NRas-like 2 102893694 102894391 - 116894066 MODEL JAAIVD010000001 pseudo 625840529 Glipr1l2 GLIPR1 like 2 1 190234684 190264155 - 30032202 116890011 MODEL JAAIVD010000025;XM_032890795;XM_032890796 XP_032746686;XP_032746687 GLIPR1-like protein 2 protein-coding 625840542 Sec63 SEC63 homolog, protein translocation regulator INVOLVED IN liver development (ortholog); nitrogen cycle metabolic process (ortholog); post-translational protein targeting to endoplasmic reticulum membrane (ortholog); ASSOCIATED WITH autosomal dominant tubulointerstitial kidney disease 2 (ortholog); genetic disease (ortholog); Glanzmann Thrombasthenia 2 (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog) 18 42469585 42537977 + 30032202 116886818 MODEL JAAIVD010000013;XM_032888245;XM_032888246 XP_032744136;XP_032744137 translocation protein SEC63 homolog protein-coding 625840569 Ttll6 tubulin tyrosine ligase like 6 ENCODES a protein that exhibits protein-glutamic acid ligase activity (ortholog); tubulin binding (ortholog); tubulin-glutamic acid ligase activity (ortholog); INVOLVED IN microtubule bundle formation (ortholog); microtubule severing (ortholog); positive regulation of cilium movement (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); ciliary basal body (ortholog); cilium (ortholog) 9 58215890 58250209 - 30032202 116910091 MODEL JAAIVD010000002;XM_032913916 XP_032769807 tubulin polyglutamylase TTLL6 protein-coding 625840589 LOC116914559 uncharacterized LOC116914559 13 2173698 2182310 - 116914559 MODEL JAAIVD010000008;XM_032918912 XP_032774803 uncharacterized protein LOC116914559 protein-coding 625840595 Etaa1 ETAA1 activator of ATR kinase ENCODES a protein that exhibits protein serine/threonine kinase activator activity (ortholog); INVOLVED IN DNA damage response (ortholog); mitotic G2/M transition checkpoint (ortholog); positive regulation of protein serine/threonine kinase activity (ortholog); ASSOCIATED WITH pancreatic cancer (ortholog); FOUND IN nuclear replication fork (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) 11 86322721 86337233 - 116912483 MODEL JAAIVD010000006;XM_032916549;XM_032916550 XP_032772440;XP_032772441 ewing's tumor-associated antigen 1 protein-coding 625840609 LOC116901770 protein NipSnap homolog 3B 1 96798040 96806931 + 30032202 116901770 MODEL JAAIVD010000025;XM_032903912 XP_032759803 protein-coding 625840619 LOC116900397 olfactory receptor 4C11-like 5 69938502 69941439 + 22301074 116900397 MODEL JAAIVD010000023;XM_032902143;XM_032902144 XP_032758034;XP_032758035 protein-coding 625840625 Nicol1 NELL2 interacting cell ontogeny regulator 1 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); transferrin receptor binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); spermatogenesis (ortholog); FOUND IN extracellular region (ortholog); perinuclear region of cytoplasm (ortholog) 11 70884469 70886079 - 116912597 MODEL JAAIVD010000006;XM_032916718;XM_032916719 XP_032772609;XP_032772610 C11H4orf48 chromosome 11 C4orf48 homolog;neuropeptide-like protein C4orf48 homolog protein-coding 625840636 Arpin actin related protein 2/3 complex inhibitor INVOLVED IN actin filament bundle assembly (ortholog); blood vessel development (ortholog); directional locomotion (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); COVID-19 (ortholog); FOUND IN lamellipodium (ortholog) 2 120316868 120325130 + 22301074;30032202 116891933 MODEL JAAIVD010000001;XM_032893373 XP_032749264 protein-coding 625840646 LOC116910203 olfactory receptor 3A1 9 93045142 93046089 - 22301074;30032202 116910203 MODEL JAAIVD010000002;XM_032914066 XP_032769957 protein-coding 625840649 Laptm4a lysosomal protein transmembrane 4 alpha FOUND IN Golgi apparatus (ortholog); late endosome membrane (ortholog); lysosomal membrane (ortholog) 7 29167234 29185133 + 30032202 116904862 MODEL JAAIVD010000026;XM_032907453 XP_032763344 lysosomal-associated transmembrane protein 4A protein-coding 625840660 Lyrm9 LYR motif containing 9 ASSOCIATED WITH lung small cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog) 9 91603215 91616581 - 116909998 MODEL JAAIVD010000002;XM_032913783;XM_032913784 XP_032769674;XP_032769675 LYR motif-containing protein 9 protein-coding 625840672 Bace2 beta-secretase 2 ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN astrocyte activation (ortholog); glucose homeostasis (ortholog); melanosome organization (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); frontotemporal dementia (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN dense core granule (ortholog); Golgi apparatus (ortholog); melanosome membrane (ortholog) 4 47136476 47218535 - 22301074;30032202 116898941 MODEL JAAIVD010000003;XM_032900357 XP_032756248 protein-coding 625840685 Fes FES proto-oncogene, tyrosine kinase ENCODES a protein that exhibits immunoglobulin receptor binding (ortholog); microtubule binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); INVOLVED IN cardiac muscle cell proliferation (ortholog); cellular response to vitamin D (ortholog); centrosome cycle (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH coronary artery disease (ortholog); esophagus squamous cell carcinoma (ortholog); female breast cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytoplasmic vesicle (ortholog) 2 119857126 119866284 + 22301074;30032202 116891917 MODEL JAAIVD010000001;XM_032893341 XP_032749232 tyrosine-protein kinase Fes/Fps protein-coding 625840708 Vav2 vav guanine nucleotide exchange factor 2 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); phosphotyrosine residue binding (ortholog); INVOLVED IN cell migration (ortholog); lamellipodium assembly (ortholog); positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; erythropoietin signaling pathway; FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) 5 9232935 9401315 + 22301074;30032202 116901240 MODEL JAAIVD010000023;XM_032902989;XM_032902990;XM_032902991 XP_032758880;XP_032758881;XP_032758882 guanine nucleotide exchange factor VAV2 protein-coding 625840744 LOC116902567 small nucleolar RNA SNORA48 5 129022023 129022165 + 116902567 MODEL JAAIVD010000023;XR_004388163 snorna 625840747 Trnar-gcg transfer RNA arginine (anticodon GCG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889723 MODEL JAAIVD010000061 trna 625840748 Klhdc8b kelch domain containing 8B INVOLVED IN mitotic cytokinetic process (ortholog); mitotic nuclear division (ortholog); nuclear chromosome segregation (ortholog); ASSOCIATED WITH Hodgkin's lymphoma (ortholog); FOUND IN cellularization cleavage furrow (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 99776235 99781180 - 22301074 116907588 MODEL JAAIVD010000027;XM_032910629 XP_032766520 kelch domain-containing protein 8B protein-coding 625840758 Msl1 MSL complex subunit 1 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); positive regulation of DNA-templated transcription (ortholog); FOUND IN MSL complex (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) 9 55631308 55640839 - 30032202 116908808 MODEL JAAIVD010000002;XM_032912213;XM_032912214 XP_032768104;XP_032768105 male-specific lethal 1 homolog protein-coding 625840772 Cblc Cbl proto-oncogene C ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); phosphotyrosine residue binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN negative regulation of epidermal growth factor receptor signaling pathway (ortholog); negative regulation of MAPK cascade (ortholog); negative regulation of neuron apoptotic process (ortholog) 2 170819082 170834454 + 22301074;30032202 116892521 MODEL JAAIVD010000001;XM_032894276 XP_032750167 E3 ubiquitin-protein ligase CBL-C protein-coding 625840785 LOC116899844 small nucleolar RNA SNORA17 4 41961077 41961209 - 116899844 MODEL JAAIVD010000003;XR_004387841 snorna 625840788 LOC116910681 U1 spliceosomal RNA 9 42633397 42633557 - 116910681 MODEL JAAIVD010000002;XR_004389212 snrna 625840791 Abcc8 ATP binding cassette subfamily C member 8 ENCODES a protein that exhibits ADP binding (ortholog); ATP binding (ortholog); ATPase-coupled monoatomic cation transmembrane transporter activity (ortholog); INVOLVED IN action potential (ortholog); cellular response to nutrient levels (ortholog); female pregnancy (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; altered insulin secretion pathway; ASSOCIATED WITH atrial heart septal defect (ortholog); brain edema (ortholog); Brain Injuries (ortholog); FOUND IN inward rectifying potassium channel (ortholog); plasma membrane (ortholog); presynaptic membrane (ortholog) 2 153324398 153405223 + 22301074;30032202 116892109 MODEL JAAIVD010000001;XM_032893587;XM_032893588 XP_032749478;XP_032749479 ATP-binding cassette sub-family C member 8 protein-coding 625840837 LOC116896611 ATP synthase F(0) complex subunit C2, mitochondrial-like 1 83613362 83624422 - 116896611 MODEL JAAIVD010000025 pseudo 625840838 LOC116888505 uncharacterized LOC116888505 X 18070689 18087260 - 116888505 MODEL JAAIVD010000014;XM_032889797;XM_032889798 XP_032745688;XP_032745689 uncharacterized protein LOC116888505 protein-coding 625840850 LOC116896176 sorting nexin-6-like 3 14913910 14915488 + 22301074;30032202 116896176 MODEL JAAIVD010000012;XM_032897214 XP_032753105 protein-coding 625840855 LOC116883677 spermatogenesis-associated protein 31D3-like 14 78397680 78403565 + 116883677 MODEL JAAIVD010000009;XM_032884886 XP_032740777 protein-coding 625840863 LOC116899652 uncharacterized LOC116899652 4 164909491 164910491 - 116899652 MODEL JAAIVD010000003;XR_004387747 ncrna 625840867 LOC116900447 olfactory receptor 4C15-like 5 70973969 70974904 - 22301074 116900447 MODEL JAAIVD010000023;XM_032902188 XP_032758079 protein-coding 625840870 Rs1 retinoschisin 1 ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN protein homooligomerization (ortholog); retina layer formation (ortholog); visual perception (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); retinoschisis (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) X 32127270 32156640 + 116888304 MODEL JAAIVD010000014;XM_032889578 XP_032745469 retinoschisin protein-coding 625840879 Arl3 ARF like GTPase 3 ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN cilium assembly (ortholog); Golgi to plasma membrane transport (ortholog); intraciliary transport (ortholog); ASSOCIATED WITH autosomal recessive polycystic kidney disease (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN axoneme (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 2 45999920 46045153 - 22301074;30032202 116891252 MODEL JAAIVD010000001;XM_032892132 XP_032748023 ADP ribosylation factor like GTPase 3;ADP-ribosylation factor-like protein 3 protein-coding 625840889 LOC116904255 uncharacterized protein C9orf85 homolog 6 29668868 29669106 - 116904255 MODEL JAAIVD010000024 pseudo 625840890 LOC116887734 small nucleolar RNA SNORA17 18 15035258 15035381 - 116887734 MODEL JAAIVD010000013 pseudo 625840891 Rspo3 R-spondin 3 ENCODES a protein that exhibits frizzled binding (ortholog); heparin binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN angiogenesis (ortholog); blood vessel remodeling (ortholog); branching involved in labyrinthine layer morphogenesis (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); hepatocellular carcinoma (ortholog); FOUND IN extracellular region (ortholog) 5 5580500 5617681 - 116900001 MODEL JAAIVD010000023;XM_032901806 XP_032757697 R-spondin-3 protein-coding 625840898 LOC116887733 small nucleolar RNA SNORA17 18 40928920 40929053 + 116887733 MODEL JAAIVD010000013;XR_004386245 snorna 625840901 Kctd8 potassium channel tetramerization domain containing 8 ENCODES a protein that exhibits G protein-coupled neurotransmitter receptor activity (ortholog); obsolete G protein-coupled neurotransmitter receptor activity involved in regulation of presynaptic membrane potential (ortholog); INVOLVED IN regulation of G protein-coupled receptor signaling pathway (ortholog); FOUND IN postsynapse (ortholog); presynaptic active zone membrane (ortholog); presynaptic membrane (ortholog) 11 26170394 26406463 - 22301074;30032202 116912140 MODEL JAAIVD010000006;XM_032916054 XP_032771945 BTB/POZ domain-containing protein KCTD8 protein-coding 625840907 LOC116887807 small nuclear ribonucleoprotein G-like X 82292937 82293092 + 30032202 116887807 MODEL JAAIVD010000014;XM_032889332 XP_032745223 protein-coding 625840910 Dusp8 dual specificity phosphatase 8 ENCODES a protein that exhibits phosphatase activity (ortholog); INVOLVED IN dephosphorylation (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway 2 7424047 7440622 + 22301074;30032202 116890850 MODEL JAAIVD010000001;XM_032891391;XM_032891392 XP_032747282;XP_032747283 dual specificity protein phosphatase 8 protein-coding 625840924 LOC116900738 stress-70 protein, mitochondrial-like 5 141994041 141996094 + 116900738 MODEL JAAIVD010000023 pseudo 625840925 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92643699 92643770 + 116904830 MODEL JAAIVD010000024 trna 625840926 Spred1 sprouty related EVH1 domain containing 1 ENCODES a protein that exhibits phosphatase binding (ortholog); protein kinase binding (ortholog); protein serine/threonine kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of angiogenesis (ortholog); negative regulation of cell migration involved in sprouting angiogenesis (ortholog); negative regulation of epithelial to mesenchymal transition (ortholog); ASSOCIATED WITH Cafe-au-Lait Spots (ortholog); Costello syndrome (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) 5 95268323 95332960 + 22301074;30032202 116901771 MODEL JAAIVD010000023;XM_032903911 XP_032759802 sprouty-related, EVH1 domain-containing protein 1 protein-coding 625840937 Krt12 keratin 12 INVOLVED IN cornea development in camera-type eye (ortholog); epithelium development (ortholog); morphogenesis of an epithelium (ortholog); ASSOCIATED WITH corneal dystrophy (ortholog); genetic disease (ortholog); Meesmann corneal dystrophy (ortholog) 9 55022332 55029363 + 22301074;30032202 116908916 MODEL JAAIVD010000002;XM_032912372 XP_032768263 keratin, type I cytoskeletal 12 protein-coding 625840949 Pecam1 platelet and endothelial cell adhesion molecule 1 ENCODES a protein that exhibits protein homodimerization activity (ortholog); protein phosphatase binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN angiogenesis (ortholog); bicellular tight junction assembly (ortholog); cell adhesion (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Acute Lung Injury (ortholog); atherosclerosis (ortholog); FOUND IN cell periphery (ortholog); cell surface (ortholog); cell-cell contact zone (ortholog) 9 72417008 72476718 + 30032202 116909861 MODEL JAAIVD010000002;XM_032913587 XP_032769478 platelet endothelial cell adhesion molecule protein-coding 625840969 Cct8l2 chaperonin containing TCP1 subunit 8 like 2 6 154695698 154697778 + 22301074;30032202 116903020 MODEL JAAIVD010000024;XM_032905333 XP_032761224 T-complex protein 1 subunit theta-like 2 protein-coding 625840974 LOC116911519 olfactory receptor 6K3-like 10 52840454 52841401 + 22301074 116911519 MODEL JAAIVD010000005;XM_032915512 XP_032771403 protein-coding 625840977 LOC116893391 interferon alpha-C-like 1 65584241 65584822 + 22301074;30032202 116893391 MODEL JAAIVD010000025;XM_032895203 XP_032751094 protein-coding 625840980 LOC116909564 olfactory receptor 1361-like 9 38640844 38641785 - 22301074;30032202 116909564 MODEL JAAIVD010000002;XM_032913183 XP_032769074 protein-coding 625840983 Klhl10 kelch like family member 10 INVOLVED IN cell morphogenesis (ortholog); fertilization (ortholog); homeostasis of number of cells within a tissue (ortholog); ASSOCIATED WITH spermatogenic failure 11 (ortholog); spermatogenic failure 3 (ortholog); FOUND IN cytoplasm (ortholog) 9 59745304 59761659 + 22301074 116910621 MODEL JAAIVD010000002;XM_032914570 XP_032770461 kelch-like protein 10 protein-coding 625840992 LOC116903005 vomeronasal type-1 receptor 95 6 146637570 146638514 - 22301074;30032202 116903005 MODEL JAAIVD010000024;XM_032905317 XP_032761208 protein-coding 625840995 Cnbd1 cyclic nucleotide binding domain containing 1 1 124506434 124827286 + 116889224 MODEL JAAIVD010000025;XM_032890379 XP_032746270 cyclic nucleotide-binding domain-containing protein 1 protein-coding 625841010 Zmynd8 zinc finger MYND-type containing 8 ENCODES a protein that exhibits histone H3K14ac reader activity (ortholog); histone H3K4me1 reader activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); modulation of excitatory postsynaptic potential (ortholog); negative regulation of cell migration (ortholog); ASSOCIATED WITH intellectual disability (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); dendritic shaft (ortholog) 5 152079713 152182971 + 22301074 116902328 MODEL JAAIVD010000023;XM_032904782;XM_032904783;XM_032904784;XM_032904785;XM_032904786;XM_032904787;XM_032904788;XM_032904790;XM_032904791;XM_032904792;XM_032904793;XM_032904794;XM_032904795;XM_032904796;XM_032904797;XM_032904798;XM_032904799;XM_032904800 XP_032760673;XP_032760674;XP_032760675;XP_032760676;XP_032760677;XP_032760678;XP_032760679;XP_032760681;XP_032760682;XP_032760683;XP_032760684;XP_032760685;XP_032760686;XP_032760687;XP_032760688;XP_032760689;XP_032760690;XP_032760691 protein kinase C-binding protein 1 protein-coding 625841076 Zdhhc15 zDHHC palmitoyltransferase 15 ENCODES a protein that exhibits palmitoyltransferase activity (ortholog); protein-cysteine S-palmitoyltransferase activity (ortholog); INVOLVED IN establishment of protein localization (ortholog); peptidyl-L-cysteine S-palmitoylation (ortholog); positive regulation of dendrite development (ortholog); ASSOCIATED WITH non-syndromic X-linked intellectual disability 91 (ortholog); oculocutaneous albinism type IB (ortholog); spastic diplegia (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); plasma membrane (ortholog) X 67124965 67220296 - 30032202 116887973 MODEL JAAIVD010000014;XM_032889412 XP_032745303 palmitoyltransferase ZDHHC15;zinc finger DHHC-type palmitoyltransferase 15 protein-coding 625841090 Pcm1 pericentriolar material 1 ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN centrosome cycle (ortholog); cilium assembly (ortholog); cytoplasmic microtubule organization (ortholog); ASSOCIATED WITH schizophrenia (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN apical part of cell (ortholog); centriolar satellite (ortholog); centriole (ortholog) 13 46236555 46331171 - 30032202 116914617 MODEL JAAIVD010000008;XM_032918979 XP_032774870 pericentriolar material 1 protein protein-coding 625841133 LOC116889172 ribosome biogenesis protein NSA2 homolog X 60732669 60733442 - 116889172 MODEL JAAIVD010000014 pseudo 625841134 Prc1 protein regulator of cytokinesis 1 ENCODES a protein that exhibits identical protein binding (ortholog); kinesin binding (ortholog); protein kinase binding (ortholog); INVOLVED IN positive regulation of cell population proliferation (ortholog); regulation of cytokinesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); hepatocellular carcinoma (ortholog); FOUND IN contractile ring (ortholog); microtubule cytoskeleton (ortholog); midbody (ortholog) 2 119931853 119952852 - 30032202 116891921 MODEL JAAIVD010000001;XM_032893348;XM_032893349;XM_032893350;XM_032893351;XM_032893352;XM_032893353 XP_032749239;XP_032749240;XP_032749241;XP_032749242;XP_032749243;XP_032749244 protein-coding 625841165 LOC116885719 60S ribosome subunit biogenesis protein NIP7 homolog 16 11993273 11993808 + 116885719 MODEL JAAIVD010000004 pseudo 625841166 Usp40 ubiquitin specific peptidase 40 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); FOUND IN cytoplasm (ortholog) 4 160054653 160123592 - 22301074;30032202 116899616 MODEL JAAIVD010000003;XM_032901577 XP_032757468 ubiquitin carboxyl-terminal hydrolase 40 protein-coding 625841201 LOC116914766 cytochrome P450 4V2 INVOLVED IN fatty acid omega-oxidation (ortholog); ASSOCIATED WITH Bietti crystalline corneoretinal dystrophy (ortholog); Choroideremia (ortholog); corneal dystrophy (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 13 42513127 42539162 + 22301074 116914766 MODEL JAAIVD010000008;XM_032919215 XP_032775106 protein-coding 625841216 LOC116912490 uncharacterized LOC116912490 1 247115616 247159450 - 116912490 MODEL JAAIVD010000025;XR_004389463;XR_004389464 ncrna 625841224 Ppm1b protein phosphatase, Mg2+/Mn2+ dependent 1B ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN N-terminal protein myristoylation (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of defense response to virus (ortholog); ASSOCIATED WITH hypotonia-cystinuria syndrome (ortholog); Lynch syndrome (ortholog); Myocardial Ischemia (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) 7 7907651 7965953 - 22301074;30032202 116905775 MODEL JAAIVD010000026;XM_032908747;XM_032908748;XM_032908749;XM_032908750 XP_032764638;XP_032764639;XP_032764640;XP_032764641 protein phosphatase 1B protein-coding 625841247 LOC116895773 ATP synthase subunit O, mitochondrial-like 3 48102593 48103156 - 116895773 MODEL JAAIVD010000012 pseudo 625841248 Stac SH3 and cysteine rich domain ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN cellular response to heat (ortholog); muscle contraction (ortholog); positive regulation of cation channel activity (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); T-tubule (ortholog) 8 102542679 102662401 - 30032202 116906881 MODEL JAAIVD010000027;XM_032909793 XP_032765684 SH3 and cysteine-rich domain-containing protein protein-coding 625841264 Sapcd2 suppressor APC domain containing 2 INVOLVED IN establishment of mitotic spindle orientation (ortholog); negative regulation of protein localization to cell cortex (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN apical cortex (ortholog); apical junction complex (ortholog); cytosol (ortholog) 5 11806501 11811666 - 116901305 MODEL JAAIVD010000023;XM_032903107 XP_032758998 suppressor APC domain-containing protein 2 protein-coding 625841274 LOC116906231 la-related protein 4B-like 7 121778047 121780453 - 116906231 MODEL JAAIVD010000026 pseudo 625841275 LOC116889947 olfactory receptor 10P1-like 1 161550243 161551166 + 22301074 116889947 MODEL JAAIVD010000025;XM_032890753 XP_032746644 protein-coding 625841278 Bmpr1b bone morphogenetic protein receptor type 1B ENCODES a protein that exhibits ATP binding (ortholog); BMP binding (ortholog); BMP receptor activity (ortholog); INVOLVED IN BMP signaling pathway (ortholog); bone development (ortholog); camera-type eye development (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH acromesomelic dysplasia 3 (ortholog); acromesomelic dysplasia, Hunter-Thompson type (ortholog); asthma (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog); plasma membrane (ortholog) 3 19327175 19369915 - 22301074;30032202 116896201 MODEL JAAIVD010000012;XM_032897250;XM_032897251 XP_032753141;XP_032753142 bone morphogenetic protein receptor type-1B protein-coding 625841295 LOC116897579 small nucleolar RNA SNORA17 3 66501677 66501806 - 116897579 MODEL JAAIVD010000012;XR_004387587 snorna 625841298 LOC116883310 uncharacterized LOC116883310 14 52567192 52576961 - 116883310 MODEL JAAIVD010000009;XR_004385744 ncrna 625841303 LOC116898345 elongin-B-like 4 48941900 48943018 - 22301074;30032202 116898345 MODEL JAAIVD010000003;XM_032899666 XP_032755557 protein-coding 625841309 LOC116897635 small Cajal body-specific RNA 2 3 49708320 49708739 + 116897635 MODEL JAAIVD010000012;XR_004387614 ncrna 625841312 Pno1 partner of NOB1 homolog INVOLVED IN ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; FOUND IN nucleolus (ortholog); small-subunit processome (ortholog) 11 85672944 85680791 - 22301074;30032202 116912661 MODEL JAAIVD010000006;XM_032916780 XP_032772671 RNA-binding protein PNO1 protein-coding 625841323 Arrdc1 arrestin domain containing 1 ENCODES a protein that exhibits arrestin family protein binding (ortholog); identical protein binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN extracellular transport (ortholog); extracellular vesicle biogenesis (ortholog); negative regulation of Notch signaling pathway (ortholog); FOUND IN cytoplasmic vesicle (ortholog); extracellular exosome (ortholog); extracellular vesicle (ortholog) 5 12255399 12262542 + 30032202 116901332 MODEL JAAIVD010000023;XM_032903153;XM_032903154;XM_032903155 XP_032759044;XP_032759045;XP_032759046 arrestin domain-containing protein 1 protein-coding 625841342 Tex14 testis expressed 14, intercellular bridge forming factor ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); cellular response to leukemia inhibitory factor (ortholog); intercellular bridge organization (ortholog); ASSOCIATED WITH prostate cancer (ortholog); spermatogenic failure 23 (ortholog); spermatogenic failure 3 (ortholog); FOUND IN intercellular bridge (ortholog); kinetochore (ortholog); midbody (ortholog) 9 83244030 83339632 - 22301074;30032202 116910101 MODEL JAAIVD010000002;XM_032913928 XP_032769819 inactive serine/threonine-protein kinase TEX14 protein-coding 625841375 Kif4a kinesin family member 4A INVOLVED IN mitotic cytokinesis (ortholog); mitotic spindle midzone assembly (ortholog); ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); cerebellar hypoplasia (ortholog); COVID-19 (ortholog); FOUND IN midbody (ortholog) X 58740239 58798787 - 22301074;30032202 116887923 MODEL JAAIVD010000014;XM_032889389 XP_032745280 chromosome-associated kinesin KIF4A protein-coding 625841403 LOC116890232 testis-specific H1 histone INVOLVED IN sperm DNA condensation (ortholog); spermatid nucleus elongation (ortholog); FOUND IN chromatin (ortholog) 1 271085553 271086881 - 116890232 MODEL JAAIVD010000025;XM_032890962 XP_032746853 protein-coding 625841408 LOC116895834 voltage-dependent anion-selective channel protein 1-like 3 78807135 78807927 - 116895834 MODEL JAAIVD010000012 pseudo 625841409 Grin2d glutamate ionotropic receptor NMDA type subunit 2D ENCODES a protein that exhibits glutamate binding (ortholog); glutamate-gated calcium ion channel activity (ortholog); glutamate-gated receptor activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); calcium ion transmembrane import into cytosol (ortholog); cellular response to L-glutamate (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 46 (ortholog); Developmental Disease (ortholog); epilepsy (ortholog); FOUND IN glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog); NMDA selective glutamate receptor complex (ortholog) 2 153648088 153684948 + 22301074;30032202 116892121 MODEL JAAIVD010000001;XM_032893602;XM_032893603 XP_032749493;XP_032749494 glutamate receptor ionotropic, NMDA 2D protein-coding 625841432 LOC116895832 heterogeneous nuclear ribonucleoprotein A3-like 3 78129776 78130910 - 116895832 MODEL JAAIVD010000012 pseudo 625841433 Ralgapa2 Ral GTPase activating protein catalytic subunit alpha 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN activation of GTPase activity (ortholog); Ral protein signal transduction (ortholog); regulation of exocyst localization (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 5 125865805 126136191 - 22301074;30032202 116902064 MODEL JAAIVD010000023;XM_032904353 XP_032760244 ral GTPase-activating protein subunit alpha-2 protein-coding 625841478 Rsc1a1 regulator of solute carriers 1 ENCODES a protein that exhibits sodium channel inhibitor activity (ortholog); INVOLVED IN intestinal absorption (ortholog); negative regulation of D-glucose transmembrane transport (ortholog); negative regulation of Golgi to plasma membrane protein transport (ortholog); ASSOCIATED WITH obesity (ortholog); FOUND IN brush border (ortholog); Golgi apparatus (ortholog); membrane (ortholog) 1 16459061 16468303 + 116893252 MODEL JAAIVD010000025;XM_032895116 XP_032751007 regulatory solute carrier protein family 1 member 1 protein-coding 625841485 LOC116900934 gamma-aminobutyric acid receptor-associated protein-like 2 5 83003490 83020082 + 116900934 MODEL JAAIVD010000023 pseudo 625841486 Kiaa1210 KIAA1210 ortholog FOUND IN acrosomal vesicle (ortholog); basal ectoplasmic specialization (ortholog) X 102601173 102645643 - 116888735 MODEL JAAIVD010000014;XM_032890026 XP_032745917 acrosomal protein KIAA1210 homolog protein-coding 625841504 LOC116903569 importin-7-like 6 60637741 60642467 + 22301074;30032202 116903569 MODEL JAAIVD010000024;XM_032906188 XP_032762079 protein-coding 625841509 LOC116893202 olfactory receptor-like protein COR9 2 106746882 106750737 + 116893202 MODEL JAAIVD010000001 pseudo 625841510 LOC116901085 uncharacterized LOC116901085 5 151971048 151973367 + 116901085 MODEL JAAIVD010000023;XM_032902648 XP_032758539 uncharacterized protein LOC116901085 protein-coding 625841516 Lrrc29 Leucine-rich repeat-containing protein 29 ASSOCIATED WITH pneumoconiosis (ortholog) 17 25038263 25052255 - 22301074;30032202 116886375 MODEL JAAIVD010000011;XM_032887840;XM_032887841;XM_032887842 XP_032743731;XP_032743732;XP_032743733 leucine rich repeat containing 29 protein-coding 625841531 LOC116888015 dystrophin-like X 79927226 79946852 - 30032202 116888015 MODEL JAAIVD010000014;XM_032889429 XP_032745320 protein-coding 625841538 LOC116914363 zinc finger protein Pegasus-like 13 75072413 75073603 - 30032202 116914363 MODEL JAAIVD010000008;XM_032918572 XP_032774463 protein-coding 625841541 LOC116888929 uncharacterized LOC116888929 X 63370 96993 - 22301074;30032202 116888929 MODEL JAAIVD010000014;XM_032890171 XP_032746062 uncharacterized protein LOC116888929 protein-coding 625841551 Abcf1 ATP binding cassette subfamily F member 1 ENCODES a protein that exhibits ATP binding (ortholog); ribosome binding (ortholog); translation activator activity (ortholog); INVOLVED IN positive regulation of translation (ortholog); ribosome biogenesis (ortholog); translational initiation (ortholog); ASSOCIATED WITH allergic disease (ortholog); Disease Progression (ortholog); long QT syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear envelope (ortholog) 18 9149234 9162109 - 22301074;30032202 116887479 MODEL JAAIVD010000013;XM_032889098;XM_032889099 XP_032744989;XP_032744990 ATP-binding cassette sub-family F member 1 protein-coding 625841582 LOC116914444 uncharacterized LOC116914444 1 188555521 188588991 - 116914444 MODEL JAAIVD010000025 pseudo 625841583 LOC116904684 small nucleolar RNA SNORA2/SNORA34 family 6 59525822 59525958 - 116904684 MODEL JAAIVD010000024;XR_004388382 snorna 625841586 LOC116889886 vomeronasal type-1 receptor 4-like 1 158278863 158279795 - 22301074;30032202 116889886 MODEL JAAIVD010000025;XM_032890708 XP_032746599 protein-coding 625841590 Psmc5 proteasome 26S subunit, ATPase 5 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); DNA-binding transcription factor binding (ortholog); general transcription initiation factor binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of inclusion body assembly (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); PARTICIPATES IN retinoic acid signaling pathway; ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); Neurodevelopmental Disorders (ortholog); Stevens-Johnson syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) 9 72857877 72863803 - 22301074;30032202 116908757 MODEL JAAIVD010000002;XM_032912108 XP_032767999 26S proteasome regulatory subunit 8 protein-coding 625841606 LOC116900251 olfactory receptor 1013-like 5 63075229 63076164 - 22301074;30032202 116900251 MODEL JAAIVD010000023;XM_032902003 XP_032757894 protein-coding 625841609 Txndc5 thioredoxin domain containing 5 ENCODES a protein that exhibits protein disulfide isomerase activity (ortholog); protein-disulfide reductase activity (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Arthritis (ortholog); Neoplasm Metastasis (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog) 14 57558303 57585087 - 22301074;30032202 116883277 MODEL JAAIVD010000009;XM_032884265 XP_032740156 thioredoxin domain-containing protein 5 protein-coding 625841623 LOC116884043 uncharacterized LOC116884043 14 569726 572104 - 116884043 MODEL JAAIVD010000009;XR_004385812 ncrna 625841627 Fbxo34 F-box protein 34 12 75509616 75576547 - 22301074 116913099 MODEL JAAIVD010000007;XM_032917232;XM_032917233;XM_032917234;XM_032917235;XM_032917236;XR_004389597 XP_032773123;XP_032773124;XP_032773125;XP_032773126;XP_032773127 F-box only protein 34 protein-coding 625841650 Icam2 intercellular adhesion molecule 2 ENCODES a protein that exhibits integrin binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN cell adhesion mediated by integrin (ortholog); dendritic cell migration (ortholog); leukocyte cell-cell adhesion (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); malignant mesothelioma (ortholog); Stomach Neoplasms (ortholog); FOUND IN cell periphery (ortholog); cleavage furrow (ortholog); microvillus (ortholog) 9 72741031 72745700 + 22301074;30032202 116909952 MODEL JAAIVD010000002;XM_032913727 XP_032769618 protein-coding 625841659 LOC116896860 uncharacterized LOC116896860 3 98356912 98360692 - 116896860 MODEL JAAIVD010000012;XR_004387374 ncrna 625841664 LOC116904692 small nucleolar RNA SNORA48 6 76278418 76278557 + 116904692 MODEL JAAIVD010000024;XR_004388388 snorna 625841667 Nosip nitric oxide synthase interacting protein ENCODES a protein that exhibits molecular sequestering activity (ortholog); INVOLVED IN negative regulation of catalytic activity (ortholog); negative regulation of nitric-oxide synthase activity (ortholog); regulation of nitric oxide biosynthetic process (ortholog); ASSOCIATED WITH holoprosencephaly (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 154468341 154483279 - 22301074;30032202 116892172 MODEL JAAIVD010000001;XM_032893678;XM_032893679 XP_032749569;XP_032749570 nitric oxide synthase-interacting protein protein-coding 625841684 Has3 hyaluronan synthase 3 ENCODES a protein that exhibits hyaluronan synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN extracellular matrix assembly (ortholog); hyaluronan biosynthetic process (ortholog); polysaccharide biosynthetic process (ortholog); ASSOCIATED WITH pulmonary hypertension (ortholog); steatotic liver disease (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); hyaluranon cable (ortholog) 17 26594899 26603626 + 30032202 116886068 MODEL JAAIVD010000011;XM_032887382 XP_032743273 protein-coding 625841692 Ptk7 protein tyrosine kinase 7 (inactive) ENCODES a protein that exhibits ATP binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); axis elongation (ortholog); cell migration (ortholog); PARTICIPATES IN Wnt signaling, the planar cell polarity pathway; ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN cell-cell junction (ortholog); membrane (ortholog); plasma membrane (ortholog) 4 83231613 83299402 + 22301074;30032202 116898405 MODEL JAAIVD010000003;XM_032899693 XP_032755584 inactive tyrosine-protein kinase 7 protein-coding 625841717 LOC116890412 small nucleolar RNA SNORA73 family 1 25900439 25900642 + 116890412 MODEL JAAIVD010000025;XR_004386613 snorna 625841720 Terb2 telomere repeat binding bouquet formation protein 2 INVOLVED IN double-strand break repair involved in meiotic recombination (ortholog); homologous chromosome pairing at meiosis (ortholog); meiotic attachment of telomere to nuclear envelope (ortholog); ASSOCIATED WITH spermatogenic failure 3 (ortholog); spermatogenic failure 59 (ortholog); FOUND IN chromosome, telomeric region (ortholog); nuclear envelope (ortholog); nuclear inner membrane (ortholog) 5 100296579 100314670 + 30032202 116900605 MODEL JAAIVD010000023;XM_032902321 XP_032758212 telomere repeats-binding bouquet formation protein 2 protein-coding 625841731 KEG97_t06 tRNA-Met MT 3833 3901 + 64988240 trna 625841732 LOC116909465 uncharacterized LOC116909465 9 35012228 35102540 + 116909465 MODEL JAAIVD010000002;XR_004389074 ncrna 625841737 Ttc22 tetratricopeptide repeat domain 22 1 48167935 48184930 - 22301074 116899403 MODEL JAAIVD010000025;XM_032901140 XP_032757031 tetratricopeptide repeat protein 22 protein-coding 625841748 Emc10 ER membrane protein complex subunit 10 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN positive regulation of angiogenesis (ortholog); positive regulation of endothelial cell migration (ortholog); positive regulation of endothelial cell proliferation (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); Neurodevelopmental Disorder with Dysmorphic Facies and Variable Seizures (ortholog); FOUND IN EMC complex (ortholog); endoplasmic reticulum membrane (ortholog); extracellular region (ortholog) 2 155037537 155043796 + 30032202 116892207 MODEL JAAIVD010000001;XM_032893761 XP_032749652 protein-coding 625841759 Cdh15 cadherin 15 ASSOCIATED WITH autosomal dominant intellectual developmental disorder 1 (ortholog); autosomal dominant intellectual developmental disorder 3 (ortholog); intellectual disability (ortholog); FOUND IN caveola (ortholog); neuromuscular junction (ortholog); plasma membrane (ortholog) 17 42479094 42499380 + 22301074;30032202 116886485 MODEL JAAIVD010000011;XM_032887988 XP_032743879 cadherin-15 protein-coding 625841777 Cfi complement factor I INVOLVED IN cellular response to interleukin-6 (ortholog); complement activation (ortholog); glomerulus development (ortholog); ASSOCIATED WITH age related macular degeneration 13 (ortholog); atypical hemolytic-uremic syndrome (ortholog); C3 Glomerulopathy 3 (ortholog); FOUND IN extracellular region (ortholog) 3 29430890 29466129 - 22301074 116895318 MODEL JAAIVD010000012;XM_032896627 XP_032752518 protein-coding 625841795 Diaph2 diaphanous related formin 2 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN actin filament polymerization (ortholog); axon midline choice point recognition (ortholog); ephrin receptor signaling pathway (ortholog); ASSOCIATED WITH primary ovarian insufficiency (ortholog); primary ovarian insufficiency 2A (ortholog) X 82907463 83094166 - 22301074;30032202 116888029 MODEL JAAIVD010000014;XM_032889437 XP_032745328 protein diaphanous homolog 2 protein-coding 625841815 Pipox pipecolic acid and sarcosine oxidase ENCODES a protein that exhibits L-pipecolate oxidase activity (ortholog); sarcosine oxidase activity (ortholog); INVOLVED IN L-lysine catabolic process (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; glutaric aciduria type I pathway; hyperlysinemia pathway; ASSOCIATED WITH peroxisomal disease (ortholog); FOUND IN peroxisome (ortholog) 9 96561757 96575286 - 22301074;30032202 116908701 A0A8A1UAE8 MODEL JAAIVD010000002;XM_032912031 XP_032767922 peroxisomal sarcosine oxidase protein-coding 625841827 LOC116912208 ribosomal protein 63, mitochondrial-like 11 79570820 79571133 - 116912208 MODEL JAAIVD010000006 pseudo 625841828 LOC116913878 60S ribosomal protein L29-like 1 250544201 250544885 + 22301074;30032202 116913878 MODEL JAAIVD010000025;XM_032918170 XP_032774061 protein-coding 625841832 Vpreb1 V-set pre-B cell surrogate light chain 1 ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN B cell proliferation (ortholog); cell morphogenesis (ortholog); hemopoiesis (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) 4 2152833 2153666 - 30032202 116897771 MODEL JAAIVD010000003;XM_032899201 XP_032755092 immunoglobulin iota chain protein-coding 625841838 Pom121l12 POM121 transmembrane nucleoporin like 12 11 83330722 83331747 + 116912225 MODEL JAAIVD010000006;XM_032916184 XP_032772075 POM121-like protein 12 protein-coding 625841842 LOC116896957 uncharacterized LOC116896957 1 34494469 34507903 - 116896957 MODEL JAAIVD010000025;XR_004387386;XR_004387387 ncrna 625841850 Abi3 ABI family member 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN defense response to tumor cell (ortholog); modification of postsynaptic actin cytoskeleton (ortholog); negative regulation of lamellipodium assembly (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); lamellipodium (ortholog) 9 58551393 58562473 + 30032202 116909461 MODEL JAAIVD010000002;XM_032913045 XP_032768936 ABI gene family member 3 protein-coding 625841862 Trim2 tripartite motif containing 2 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); regulation of neuron apoptotic process (ortholog); ASSOCIATED WITH axonal neuropathy (ortholog); Charcot-Marie-Tooth disease type 2R (ortholog); osteoarthritis (ortholog); FOUND IN cytoplasm (ortholog) 3 69321276 69434428 + 22301074;30032202 116896738 MODEL JAAIVD010000012;XM_032898167;XM_032898168;XM_032898169;XM_032898170;XM_032898171;XM_032898172 XP_032754058;XP_032754059;XP_032754060;XP_032754061;XP_032754062;XP_032754063 tripartite motif-containing protein 2 protein-coding 625841894 LOC116911287 dimethylaniline monooxygenase [N-oxide-forming] 5-like 10 45655214 45673500 - 22301074;30032202 116911287 MODEL JAAIVD010000005;XM_032915194 XP_032771085 protein-coding 625841904 Mcoln3 mucolipin TRP cation channel 3 ENCODES a protein that exhibits monoatomic anion channel activity (ortholog); potassium channel activity (ortholog); sodium channel activity (ortholog); INVOLVED IN inner ear auditory receptor cell differentiation (ortholog); locomotory behavior (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) 3 14762626 14797548 - 30032202 116896173 MODEL JAAIVD010000012;XM_032897210;XM_032897211 XP_032753101;XP_032753102 mucolipin 3;mucolipin-3 protein-coding 625841924 LOC116902451 uncharacterized LOC116902451 1 116673525 116675371 + 116902451 MODEL JAAIVD010000025;XR_004388077 ncrna 625841928 Selenom selenoprotein M INVOLVED IN adipose tissue development (ortholog); corticosterone secretion (ortholog); hormone metabolic process (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) 11 72512212 72514745 + 30032202 116912209 MODEL JAAIVD010000006;XM_032916156 XP_032772047 protein-coding 625841937 LOC116908515 60S ribosomal protein L29-like 9 32403342 32403811 + 116908515 MODEL JAAIVD010000002 pseudo 625841938 LOC116902733 60S ribosomal protein L34-like 6 58419891 58420237 + 116902733 MODEL JAAIVD010000024 pseudo 625841939 Edn1 endothelin 1 ENCODES a protein that exhibits cytokine activity (ortholog); endothelin A receptor binding (ortholog); endothelin B receptor binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); artery smooth muscle contraction (ortholog); axon extension (ortholog); PARTICIPATES IN endothelin signaling pathway; hypoxia inducible factor pathway; inflammatory response pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); adult respiratory distress syndrome (ortholog); FOUND IN basal part of cell (ortholog); cytoplasm (ortholog); extracellular region (ortholog) 14 61273066 61279563 + 22301074;30032202 116883784 MODEL JAAIVD010000009;XM_032885026 XP_032740917 endothelin-1 protein-coding 625841948 Eif4b eukaryotic translation initiation factor 4B PARTICIPATES IN mTOR signaling pathway; translation initiation pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); major depressive disorder (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog); postsynapse (ortholog) 1 260977264 260998285 - 22301074 116883603 MODEL JAAIVD010000025;XM_032884789;XM_032884798 XP_032740680;XP_032740689 protein-coding 625841969 Hao1 hydroxyacid oxidase 1 ENCODES a protein that exhibits (S)-2-hydroxy-acid oxidase activity (ortholog); FMN binding (ortholog); glyoxylate oxidase activity (ortholog); INVOLVED IN fatty acid alpha-oxidation (ortholog); glycolate catabolic process (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); nephrolithiasis (ortholog); Prostatic Neoplasms (ortholog); FOUND IN peroxisomal matrix (ortholog); peroxisome (ortholog) 5 114194421 114250905 - 22301074 116900650 MODEL JAAIVD010000023;XM_032902361 XP_032758252 protein-coding 625841981 LOC116912212 non-histone chromosomal protein HMG-14-like 11 55144132 55144424 - 116912212 MODEL JAAIVD010000006 pseudo 625841982 LOC116898526 pumilio homolog 3-like 4 139878515 139891831 - 116898526 MODEL JAAIVD010000003 pseudo 625841983 LOC116892896 zinc finger protein 208-like 2 199667394 199683033 + 22301074 116892896 MODEL JAAIVD010000001;XM_032894808 XP_032750699 protein-coding 625841991 Elf2 E74 like ETS transcription factor 2 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of DNA-templated transcription (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH cerebellar ataxia, neuropathy, and vestibular areflexia syndrome (ortholog); systemic juvenile rheumatoid arthritis (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) 3 103111374 103199643 + 22301074;30032202 116896893 MODEL JAAIVD010000012;XM_032898439 XP_032754330 ETS-related transcription factor Elf-2 protein-coding 625842005 LOC116901889 sodium/nucleoside cotransporter 2 5 100523322 100546871 + 22301074;30032202 116901889 MODEL JAAIVD010000023;XM_032904098 XP_032759989 protein-coding 625842027 LOC116897413 U6 spliceosomal RNA 3 144243212 144243318 - 116897413 MODEL JAAIVD010000012;XR_004387455 snrna 625842030 LOC116889512 small nucleolar RNA SNORA17 X 83412332 83412462 - 116889512 MODEL JAAIVD010000014;XR_004386457 snorna 625842033 LOC116915187 small nucleolar RNA SNORD113/SNORD114 family 13 6512159 6512234 + 116915187 MODEL JAAIVD010000008 pseudo 625842034 Crnkl1 crooked neck pre-mRNA splicing factor 1 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN cellular response to brain-derived neurotrophic factor stimulus (ortholog); cellular response to leukemia inhibitory factor (ortholog); cerebral cortex development (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleus (ortholog); spliceosomal complex (ortholog) 5 125555750 125573485 - 22301074;30032202 116902057 MODEL JAAIVD010000023;XM_032904347 XP_032760238 crooked neck-like protein 1 protein-coding 625842052 Il12rb2 interleukin 12 receptor subunit beta 2 ENCODES a protein that exhibits coreceptor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN interleukin-12-mediated signaling pathway (ortholog); peptidyl-tyrosine phosphorylation (ortholog); positive regulation of natural killer cell proliferation (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH Brain Injuries (ortholog); primary biliary cholangitis 3 (ortholog); FOUND IN external side of plasma membrane (ortholog) 6 76839956 76906237 - 22301074;30032202 116903711 MODEL JAAIVD010000024;XM_032906387 XP_032762278 interleukin-12 receptor subunit beta-2 protein-coding 625842071 Mbp myelin basic protein ENCODES a protein that exhibits calmodulin binding (ortholog); lipid binding (ortholog); protease binding (ortholog); INVOLVED IN membrane organization (ortholog); myelin assembly (ortholog); myelination (ortholog); ASSOCIATED WITH angiostrongyliasis (ortholog); Brain Hypoxia-Ischemia (ortholog); Brain Injuries (ortholog); FOUND IN cell periphery (ortholog); cell surface (ortholog); compact myelin (ortholog) 15 49732626 49818803 - 22301074;30032202 116884849 MODEL JAAIVD010000010;XM_032886088;XM_032886089;XM_032886090;XM_032886091;XM_032886092;XM_032886093;XM_032886094 XP_032741979;XP_032741980;XP_032741981;XP_032741982;XP_032741983;XP_032741984;XP_032741985 protein-coding 625842092 LOC116891811 heat shock cognate 71 kDa protein-like 2 103877478 103879680 + 116891811 MODEL JAAIVD010000001 pseudo 625842093 Nthl1 nth like DNA glycosylase 1 ENCODES a protein that exhibits class I DNA-(apurinic or apyrimidinic site) endonuclease activity (ortholog); damaged DNA binding (ortholog); DNA N-glycosylase activity (ortholog); INVOLVED IN base-excision repair, AP site formation (ortholog); nucleotide-excision repair (ortholog); ASSOCIATED WITH Acute Hepatitis (ortholog); familial adenomatous polyposis (ortholog); familial adenomatous polyposis 1 (ortholog); FOUND IN mitochondrion (ortholog); nucleus (ortholog) 9 1914150 1920028 + 22301074;30032202 116909157 MODEL JAAIVD010000002;XM_032912641;XM_032912643;XM_032912644 XP_032768532;XP_032768534;XP_032768535 endonuclease III-like protein 1 protein-coding 625842109 Prodh proline dehydrogenase 1 ENCODES a protein that exhibits amino acid binding (ortholog); FAD binding (ortholog); oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor (ortholog); INVOLVED IN L-proline catabolic process (ortholog); regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; guanidinoacetate methyltransferase deficiency pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 4 3328494 3345633 - 30032202 116898660 MODEL JAAIVD010000003;XM_032899895 XP_032755786 proline dehydrogenase 1, mitochondrial protein-coding 625842127 LOC116892565 peptidyl-prolyl cis-trans isomerase FKBP1A-like 2 171811526 171812838 - 22301074 116892565 MODEL JAAIVD010000001;XM_032894343 XP_032750234 protein-coding 625842132 Taar1 trace amine associated receptor 1 ENCODES a protein that exhibits G protein-coupled amine receptor activity (ortholog); G protein-coupled receptor activity (ortholog); trace-amine receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN endomembrane system (ortholog); plasma membrane (ortholog) 2 209982371 209983412 + 22301074;30032202 116894662 MODEL JAAIVD010000001;XM_032896365 XP_032752256 trace amine-associated receptor 1 protein-coding 625842136 Bdp1 BDP1 general transcription factor IIIB subunit INVOLVED IN positive regulation of transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness 112 (ortholog); Deafness (ortholog); Hearing Loss (ortholog); FOUND IN nucleoplasm (ortholog) 3 196495038 196587349 + 30032202 116896045 MODEL JAAIVD010000012;XM_032897045 XP_032752936 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB;transcription factor TFIIIB component B'' homolog protein-coding 625842179 Nnt nicotinamide nucleotide transhydrogenase ENCODES a protein that exhibits NADP binding (ortholog); INVOLVED IN cell redox homeostasis (ortholog); cellular oxidant detoxification (ortholog); intracellular oxygen homeostasis (ortholog); PARTICIPATES IN niacin metabolic pathway; nicotinamide adenine dinucleotide metabolic pathway; ASSOCIATED WITH genetic disease (ortholog); glucocorticoid deficiency 1 (ortholog); glucocorticoid deficiency 4 with or without mineralocorticoid deficiency (ortholog); FOUND IN mitochondrion (ortholog) 3 177364721 177458712 + 22301074;30032202 116897172 MODEL JAAIVD010000012;XM_032898851;XM_032898852;XM_032898853;XM_032898854;XM_032898856;XM_032898857 XP_032754742;XP_032754743;XP_032754744;XP_032754745;XP_032754747;XP_032754748 NAD(P) transhydrogenase, mitochondrial protein-coding 625842220 Plxnd1 plexin D1 ENCODES a protein that exhibits protein domain specific binding (ortholog); semaphorin receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); aorta development (ortholog); branching involved in blood vessel morphogenesis (ortholog); ASSOCIATED WITH Congenital Heart Defects, Multiple Types, 9 (ortholog); diastolic heart failure (ortholog); DiGeorge syndrome (ortholog); FOUND IN axon (ortholog); cell body (ortholog); glutamatergic synapse (ortholog) 6 30735991 30776018 + 22301074;30032202 116903373 MODEL JAAIVD010000024;XM_032905860 XP_032761751 plexin-D1 protein-coding 625842260 Gdf10 growth differentiation factor 10 INVOLVED IN cerebellum development (ortholog); fat cell differentiation (ortholog); negative regulation of ossification (ortholog); ASSOCIATED WITH Arterial Occlusive Diseases (ortholog); Breast Neoplasms (ortholog); Mesothelioma (ortholog); FOUND IN extracellular region (ortholog) 13 9693479 9705477 + 22301074;30032202 116914813 MODEL JAAIVD010000008;XM_032919269 XP_032775160 growth/differentiation factor 10 protein-coding 625842267 LOC116894961 small nucleolar RNA SNORA31 2 225355529 225355655 - 116894961 MODEL JAAIVD010000001;XR_004387155 snorna 625842270 Polr2i RNA polymerase II subunit I INVOLVED IN transcription by RNA polymerase II (ortholog); transcription elongation by RNA polymerase II (ortholog); transcription initiation at RNA polymerase II promoter (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase II, core complex (ortholog) 2 165775587 165777029 - 22301074;30032202 116892330 MODEL JAAIVD010000001;XM_032893958 XP_032749849 DNA-directed RNA polymerase II subunit RPB9 protein-coding 625842280 LOC116890122 huntingtin-interacting protein K-like 1 241720075 241720443 + 30032202 116890122 MODEL JAAIVD010000025;XM_032890860 XP_032746751 protein-coding 625842284 LOC116904435 nucleoside diphosphate kinase B-like 6 118565237 118565692 - 116904435 MODEL JAAIVD010000024 pseudo 625842285 Flywch1 FLYWCH-type zinc finger 1 ENCODES a protein that exhibits transcription coactivator binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN DNA damage response (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Silver-Russell syndrome (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); pericentric heterochromatin (ortholog) 9 1054092 1076830 - 116909112 MODEL JAAIVD010000002;XM_032912588 XP_032768479 FLYWCH-type zinc finger-containing protein 1 protein-coding 625842295 LOC116912494 14-3-3 protein sigma-like 11 18733869 18734823 - 116912494 MODEL JAAIVD010000006 pseudo 625842296 C6 complement C6 ENCODES a protein that exhibits wide pore channel activity (ortholog); INVOLVED IN complement activation (ortholog); complement activation, GZMK pathway (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH alcohol-associated liver disease (ortholog); C6 Deficiency, Subtotal (ortholog); calcinosis (ortholog); FOUND IN extracellular region (ortholog); membrane attack complex (ortholog); other organism cell membrane (ortholog) 3 175474927 175542057 - 22301074 116895633 MODEL JAAIVD010000012;XM_032896841 XP_032752732 complement component C6 protein-coding 625842317 Itpkc inositol-trisphosphate 3-kinase C ENCODES a protein that exhibits inositol-1,4,5-trisphosphate 3-kinase activity (ortholog); kinase activity (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); phosphatidylinositol phosphate biosynthetic process (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); coronary aneurysm (ortholog); Kawasaki disease (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleus (ortholog) 2 168714290 168736017 + 22301074;30032202 116892439 MODEL JAAIVD010000001;XM_032894128 XP_032750019 protein-coding 625842328 LOC116892215 40S ribosomal protein S27-like 1 8286964 8287215 - 116892215 MODEL JAAIVD010000025 pseudo 625842329 LOC116903015 COMM domain-containing protein 1-like 6 153833722 153834335 + 22301074;30032202 116903015 MODEL JAAIVD010000024;XM_032905327 XP_032761218 protein-coding 625842334 Gadl1 glutamate decarboxylase like 1 ASSOCIATED WITH Liver Neoplasms (ortholog) 8 107197595 107338990 + 22301074;30032202 116907083 MODEL JAAIVD010000027;XM_032910039 XP_032765930 acidic amino acid decarboxylase GADL1 protein-coding 625842352 LOC116895298 alcohol dehydrogenase 6 3 20759623 20788633 - 22301074;30032202 116895298 MODEL JAAIVD010000012;XM_032896610 XP_032752501 protein-coding 625842362 LOC116912993 small nucleolar RNA SNORA17 11 8808928 8809059 + 116912993 MODEL JAAIVD010000006;XR_004389556 snorna 625842365 Plagl1 PLAG1 like zinc finger 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); regulation of gene expression (ortholog); skeletal muscle cell differentiation (ortholog); ASSOCIATED WITH myoepithelioma (ortholog); Stomach Neoplasms (ortholog); transient neonatal diabetes mellitus 1 (ortholog); FOUND IN nuclear body (ortholog) 2 224070399 224076797 - 30032202 116893012 MODEL JAAIVD010000001;XM_032894975 XP_032750866 zinc finger protein PLAGL1 protein-coding 625842371 Haus4 HAUS augmin like complex subunit 4 INVOLVED IN centrosome cycle (ortholog); spindle assembly (ortholog); FOUND IN centrosome (ortholog); HAUS complex (ortholog); mitotic spindle microtubule (ortholog) 12 70453507 70464714 + 22301074;30032202 116913821 MODEL JAAIVD010000007;XM_032918133 XP_032774024 HAUS augmin-like complex subunit 4 protein-coding 625842385 LOC116893352 protein Mis18-beta-like 2 157954426 157957512 - 116893352 MODEL JAAIVD010000001 pseudo 625842386 Rab11fip4 RAB11 family interacting protein 4 ENCODES a protein that exhibits protein homodimerization activity (ortholog); small GTPase binding (ortholog); INVOLVED IN neural retina development (ortholog); positive regulation of G1 to G0 transition (ortholog); regulation of cytokinesis (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cleavage furrow (ortholog); endocytic vesicle (ortholog); endosome (ortholog) 9 90744211 90849494 - 22301074;30032202 116908586 MODEL JAAIVD010000002;XM_032911802 XP_032767693 rab11 family-interacting protein 4 protein-coding 625842404 LOC116897990 keratin-associated protein 13-2-like 4 55066454 55067585 - 116897990 MODEL JAAIVD010000003;XM_032899393 XP_032755284 protein-coding 625842409 LOC116887863 phosphoenolpyruvate carboxykinase [GTP], mitochondrial-like X 45141519 45146599 + 116887863 MODEL JAAIVD010000014 pseudo 625842410 Ahi1 Abelson helper integration site 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cell junction assembly (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cilium assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); cerebellar disease (ortholog); FOUND IN adherens junction (ortholog); cell-cell junction (ortholog); centriole (ortholog) 2 215493701 215626061 - 22301074;30032202 116892970 MODEL JAAIVD010000001;XM_032894926;XM_032894927;XM_032894928;XM_032894929;XR_004386990 XP_032750817;XP_032750818;XP_032750819;XP_032750820 jouberin protein-coding 625842450 Tnfrsf25 TNF receptor superfamily member 25 FOUND IN plasma membrane (ortholog) 1 8621482 8626657 - 22301074;30032202 116892352 MODEL JAAIVD010000025;XM_032894005 XP_032749896 tumor necrosis factor receptor superfamily member 25 protein-coding 625842463 LOC116893560 DDB1- and CUL4-associated factor 12-like 2 215078160 215080860 + 116893560 MODEL JAAIVD010000001 pseudo 625842464 Pdk4 pyruvate dehydrogenase kinase 4 ENCODES a protein that exhibits ATP binding (ortholog); protein kinase activity (ortholog); pyruvate dehydrogenase (acetyl-transferring) kinase activity (ortholog); INVOLVED IN cellular response to fatty acid (ortholog); cellular response to starvation (ortholog); glucose homeostasis (ortholog); PARTICIPATES IN pyruvate metabolic pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Experimental Diabetes Mellitus (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog) 6 133130842 133142939 + 30032202 116904096 MODEL JAAIVD010000024;XM_032906966 XP_032762857 pyruvate dehydrogenase kinase, isozyme 4 protein-coding 625842479 Cox7a2l cytochrome c oxidase subunit 7A2 like ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN mitochondrial respirasome assembly (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 7 9443813 9455337 + 22301074;30032202 116905790 MODEL JAAIVD010000026;XM_032908768 XP_032764659 cytochrome c oxidase subunit 7A-related protein, mitochondrial protein-coding 625842486 Nrl neural retina leucine zipper ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); leucine zipper domain binding (ortholog); INVOLVED IN positive regulation of gene expression (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH enhanced S-cone syndrome (ortholog); enhanced S-cone syndrome 2 (ortholog); Foveal Hypoplasia (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 12 69486146 69488147 + 30032202 116913805 MODEL JAAIVD010000007;XM_032918111;XM_032918112 XP_032774002;XP_032774003 neural retina-specific leucine zipper protein protein-coding 625842494 LOC116886728 small nucleolar RNA SNORA19 17 151030 151139 - 116886728 MODEL JAAIVD010000011 pseudo 625842495 Huwe1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 ENCODES a protein that exhibits DNA binding (ortholog); histone ubiquitin ligase activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN base-excision repair (ortholog); circadian regulation of gene expression (ortholog); negative regulation of mitochondrial fusion (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); blepharophimosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear membrane (ortholog) X 12830320 12958759 - 22301074;30032202 116888416 MODEL JAAIVD010000014;XM_032889688 XP_032745579 E3 ubiquitin-protein ligase HUWE1 protein-coding 625842584 Cenpu centromere protein U INVOLVED IN chordate embryonic development (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centriolar satellite (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 13 41343979 41366602 - 30032202 116914316 MODEL JAAIVD010000008;XM_032918551 XP_032774442 protein-coding 625842600 Cacna1a calcium voltage-gated channel subunit alpha1 A ENCODES a protein that exhibits calmodulin binding (ortholog); high voltage-gated calcium channel activity (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN adult walking behavior (ortholog); behavioral response to pain (ortholog); calcium ion import (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH Alternating Hemiplegia of Childhood 1 (ortholog); amyotrophic lateral sclerosis (ortholog); Ataxia (ortholog); FOUND IN calyx of Held (ortholog); cytoplasm (ortholog); dendrite (ortholog) 17 15653693 15949541 - 22301074;30032202 116886239 MODEL JAAIVD010000011;XM_032887650 XP_032743541 voltage-dependent P/Q-type calcium channel subunit alpha-1A protein-coding 625842654 LOC116908635 olfactory receptor 2T27-like 9 39734050 39735057 + 22301074 116908635 MODEL JAAIVD010000002;XM_032911890 XP_032767781 protein-coding 625842657 LOC116908322 U6 spliceosomal RNA 8 16373204 16373310 - 116908322 MODEL JAAIVD010000027;XR_004388879 snrna 625842660 LOC116884120 U6 spliceosomal RNA 14 12696007 12696108 - 116884120 MODEL JAAIVD010000009;XR_004385850 snrna 625842663 LOC116889305 heterogeneous nuclear ribonucleoprotein A1-like X 16458050 16458983 - 116889305 MODEL JAAIVD010000014 pseudo 625842664 LOC116893824 pyrethroid hydrolase Ces2e-like 2 54823785 54831184 - 30032202 116893824 MODEL JAAIVD010000001;XM_032895538;XM_032895539 XP_032751429;XP_032751430 protein-coding 625842679 Gmeb1 glucocorticoid modulatory element binding protein 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); Hsp27 protein binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 25986545 26027501 + 30032202 116895595 MODEL JAAIVD010000025;XM_032896819;XM_032896822;XM_032896823 XP_032752710;XP_032752713;XP_032752714 glucocorticoid modulatory element-binding protein 1 protein-coding 625842699 LOC116889146 protein FAM156A/FAM156B-like 1 121912538 121913160 + 116889146 MODEL JAAIVD010000025 pseudo 625842700 LOC116906361 small nucleolar RNA SNORD113/SNORD114 family 7 127261794 127261868 + 116906361 MODEL JAAIVD010000026;XR_004388632 snorna 625842703 LOC116884389 mitogen-activated protein kinase 4-like 15 58049478 58064661 + 116884389 MODEL JAAIVD010000010 pseudo 625842704 LOC116906661 prothymosin alpha-like 1 35792331 35792789 - 30032202 116906661 MODEL JAAIVD010000025;XM_032909843 XP_032765734 protein-coding 625842708 Zfhx4 zinc finger homeobox 4 ASSOCIATED WITH Congenital Corneal Opacities, Cornea Guttata, and Corectopia (ortholog); hereditary congenital ptosis 1 (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN nucleus (ortholog) 3 138148134 138329670 - 22301074;30032202 116897015 MODEL JAAIVD010000012;XM_032898618 XP_032754509 zinc finger homeobox protein 4 protein-coding 625842723 LOC116910094 ubiquitin-like protein FUBI 9 82693928 82694424 + 22301074;30032202 116910094 MODEL JAAIVD010000002;XM_032913918 XP_032769809 protein-coding 625842728 C4H3orf70 chromosome 4 C3orf70 homolog ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 4 6320320 6367884 - 116898709 MODEL JAAIVD010000003;XM_032900000 XP_032755891 UPF0524 protein C3orf70 homolog protein-coding 625842734 LOC116908248 proline-rich protein 23B-like 8 90249866 90250588 + 116908248 MODEL JAAIVD010000027;XM_032911504 XP_032767395 protein-coding 625842738 LOC116890026 transmembrane protein 186-like 1 196044240 196044890 - 30032202 116890026 MODEL JAAIVD010000025;XM_032890804 XP_032746695 protein-coding 625842741 Gtf2a2 general transcription factor IIA subunit 2 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); RNA polymerase II general transcription initiation factor activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription initiation by RNA polymerase II (ortholog); RNA polymerase II preinitiation complex assembly (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription factor TFIIA complex (ortholog) 8 64355473 64368417 + 22301074;30032202 116908146 MODEL JAAIVD010000027;XM_032911440;XM_032911441 XP_032767331;XP_032767332 transcription initiation factor IIA subunit 2 protein-coding 625842753 LOC116886817 40S ribosomal protein S20-like 1 24391055 24391444 + 22301074;30032202 116886817 MODEL JAAIVD010000025;XM_032888248 XP_032744139 protein-coding 625842757 Tbx21 T-box transcription factor 21 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN leukocyte migration involved in inflammatory response (ortholog); lymphocyte migration (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH allergic asthma (ortholog); aspirin-induced respiratory disease (ortholog); asthma (ortholog); FOUND IN cytoplasm (ortholog); neuronal cell body (ortholog); nucleus (ortholog) 9 57275432 57291934 + 22301074;30032202 116909374 MODEL JAAIVD010000002;XM_032912928 XP_032768819 T-box transcription factor TBX21 protein-coding 625842767 LOC116885842 CD209 antigen-like protein E 16 1928306 1939406 + 116885842 MODEL JAAIVD010000004;XM_032887181 XP_032743072 protein-coding 625842775 Plbd1 phospholipase B domain containing 1 ENCODES a protein that exhibits aminopeptidase activity (ortholog); glycerophospholipase activity (ortholog); INVOLVED IN lysosomal protein catabolic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN extracellular region (ortholog); lysosome (ortholog) 6 12795783 12854406 + 22301074;30032202 116903155 MODEL JAAIVD010000024;XM_032905519 XP_032761410 phospholipase B-like 1 protein-coding 625842790 LOC116914197 U1 spliceosomal RNA 12 38125091 38125251 - 116914197 MODEL JAAIVD010000007;XR_004389732 snrna 625842793 LOC116909848 secreted and transmembrane protein 1A-like 9 62952980 62964061 + 30032202 116909848 MODEL JAAIVD010000002;XM_032913573 XP_032769464 protein-coding 625842803 LOC116907880 uncharacterized LOC116907880 8 46613799 46654153 - 116907880 MODEL JAAIVD010000027;XR_004388852 ncrna 625842808 Hpse2 heparanase 2 (inactive) ENCODES a protein that exhibits heparan sulfate proteoglycan binding (ortholog); heparanase activity (ortholog); INVOLVED IN extracellular matrix organization (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH CAKUT (ortholog); genetic disease (ortholog); urofacial syndrome (ortholog); FOUND IN extracellular matrix (ortholog) 2 41882475 42887080 - 22301074;30032202 116891183 MODEL JAAIVD010000001;XM_032892000;XM_032892001;XM_032892002 XP_032747891;XP_032747892;XP_032747893 inactive heparanase-2 protein-coding 625842825 Myo19 myosin XIX ENCODES a protein that exhibits actin binding (ortholog); ATP hydrolysis activity (ortholog); myosin light chain binding (ortholog); INVOLVED IN mitochondrion migration along actin filament (ortholog); mitocytosis (ortholog); regulation of cytokinesis (ortholog); FOUND IN cytosol (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 9 85793670 85823146 - 22301074;30032202 116909192 MODEL JAAIVD010000002;XM_032912690 XP_032768581 unconventional myosin-XIX protein-coding 625842855 LOC116908238 40S ribosomal protein S2-like 8 84347885 84363191 + 116908238 MODEL JAAIVD010000027 pseudo 625842856 Ei24 EI24 autophagy associated transmembrane protein ENCODES a protein that exhibits importin-alpha family protein binding (ortholog); INVOLVED IN autophagy (ortholog); cellular response to UV-C (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cytosol (ortholog) 8 32960494 32972729 - 30032202 116906908 MODEL JAAIVD010000027;XM_032909825 XP_032765716 etoposide-induced protein 2.4 homolog protein-coding 625842870 Rpl37 ribosomal protein L37 ENCODES a protein that exhibits MDM2/MDM4 family protein binding (ortholog); structural constituent of ribosome (ortholog); ubiquitin ligase inhibitor activity (ortholog); INVOLVED IN cytoplasmic translation (ortholog); positive regulation of signal transduction by p53 class mediator (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog) 3 175203321 175205365 - 22301074;30032202 116897153 MODEL JAAIVD010000012;XM_032898823 XP_032754714 60S ribosomal protein L37 protein-coding 625842878 Ushbp1 USH1 protein network component harmonin binding protein 1 ENCODES a protein that exhibits PDZ domain binding (ortholog) 13 13605883 13616251 + 116915105 MODEL JAAIVD010000008;XM_032919535 XP_032775426 Usher syndrome type-1C protein-binding protein 1 protein-coding 625842894 LOC116898814 E3 ubiquitin-protein ligase DTX3L-like 4 20911053 20920899 - 30032202 116898814 MODEL JAAIVD010000003;XM_032900167;XM_032900168 XP_032756058;XP_032756059 protein-coding 625842906 Polr2g RNA polymerase II subunit G INVOLVED IN transcription by RNA polymerase II (ortholog); transcription elongation by RNA polymerase II (ortholog); transcription initiation at RNA polymerase II promoter (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase II, core complex (ortholog) 2 9148556 9152088 + 22301074;30032202 116890926 MODEL JAAIVD010000001;XM_032891566 XP_032747457 DNA-directed RNA polymerase II subunit RPB7 protein-coding 625842918 Pacs1 phosphofurin acidic cluster sorting protein 1 ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN lymphocyte homeostasis (ortholog); positive regulation of protein binding (ortholog); protein localization to Golgi apparatus (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN COPI-coated vesicle (ortholog); perinuclear region of cytoplasm (ortholog) 2 2390668 2520331 + 30032202 116890738 MODEL JAAIVD010000001;XM_032891196 XP_032747087 protein-coding 625842947 Usp24 ubiquitin specific peptidase 24 ASSOCIATED WITH Dwarfism (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 1 48377278 48506353 - 22301074;30032202 116899426 MODEL JAAIVD010000025;XM_032901177 XP_032757068 ubiquitin carboxyl-terminal hydrolase 24 protein-coding 625843019 LOC116884962 DNA methyltransferase 1-associated protein 1-like 15 45729839 45732865 - 116884962 MODEL JAAIVD010000010 pseudo 625843020 Ciapin1 cytokine induced apoptosis inhibitor 1 ENCODES a protein that exhibits 2 iron, 2 sulfur cluster binding (ortholog); iron ion binding (ortholog); INVOLVED IN hemopoiesis (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN cytosolic iron-sulfur cluster protein assembly pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 17 1702762 1718423 - 22301074;30032202 116886209 MODEL JAAIVD010000011;XM_032887597;XM_032887598;XM_032887599;XM_032887600 XP_032743488;XP_032743489;XP_032743490;XP_032743491 anamorsin protein-coding 625843041 Usp1 ubiquitin specific peptidase 1 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); peptidase activity (ortholog); INVOLVED IN monoubiquitinated protein deubiquitination (ortholog); positive regulation of receptor signaling pathway via JAK-STAT (ortholog); protein deubiquitination (ortholog); ASSOCIATED WITH Fanconi anemia (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 1 55579022 55596221 - 22301074;30032202 116899923 MODEL JAAIVD010000025;XM_032901787;XM_032901788 XP_032757678;XP_032757679 ubiquitin carboxyl-terminal hydrolase 1 protein-coding 625843059 Acly ATP citrate lyase ENCODES a protein that exhibits ATP citrate synthase activity (ortholog); INVOLVED IN acetyl-CoA biosynthetic process (ortholog); acetyl-CoA metabolic process (ortholog); acyl-CoA biosynthetic process (ortholog); PARTICIPATES IN fatty acid biosynthetic pathway; ASSOCIATED WITH congestive heart failure (ortholog); hepatocellular carcinoma (ortholog); obesity (ortholog); FOUND IN cytosol (ortholog) 9 59780983 59823393 - 22301074;30032202 116910565 MODEL JAAIVD010000002;XM_032914478;XM_032914479 XP_032770369;XP_032770370 ATP-citrate synthase protein-coding 625843091 Spata3 spermatogenesis associated 3 FOUND IN sperm flagellum (ortholog) 4 158152541 158164838 + 116898250 MODEL JAAIVD010000003;XM_032899600;XM_032899601 XP_032755491;XP_032755492 spermatogenesis-associated protein 3 protein-coding 625843105 LOC116890071 olfactory receptor 12-like 1 214990307 214991254 + 22301074;30032202 116890071 MODEL JAAIVD010000025;XM_032890833 XP_032746724 protein-coding 625843108 LOC116906403 small nucleolar RNA SNORD113/SNORD114 family 7 127249212 127249285 + 116906403 MODEL JAAIVD010000026;XR_004388669 snorna 625843111 LOC116885839 rho guanine nucleotide exchange factor 18-like 16 1272306 1305640 + 116885839 MODEL JAAIVD010000004;XM_032887178 XP_032743069 protein-coding 625843125 Chst2 carbohydrate sulfotransferase 2 ENCODES a protein that exhibits N-acetylglucosamine 6-O-sulfotransferase activity (ortholog); sulfotransferase activity (ortholog); INVOLVED IN N-acetylglucosamine metabolic process (ortholog); positive regulation of leukocyte tethering or rolling (ortholog); sulfur compound metabolic process (ortholog); FOUND IN Golgi apparatus (ortholog); trans-Golgi network (ortholog) 8 86865821 86872170 - 22301074;30032202 116907001 MODEL JAAIVD010000027;XM_032909929 XP_032765820 protein-coding 625843131 LOC116883582 histone H4-like 14 42572942 42573259 - 22301074;30032202 116883582 MODEL JAAIVD010000009;XM_032884762 XP_032740653 protein-coding 625843135 Kpna4 karyopherin subunit alpha 4 ENCODES a protein that exhibits nuclear import signal receptor activity (ortholog); nuclear localization sequence binding (ortholog); INVOLVED IN NLS-bearing protein import into nucleus (ortholog); protein import into nucleus (ortholog); response to hydrogen peroxide (ortholog); FOUND IN cytoplasm (ortholog); nuclear pore (ortholog); nucleoplasm (ortholog) 3 86169707 86226079 + 22301074;30032202 116896794 MODEL JAAIVD010000012;XM_032898263 XP_032754154 importin subunit alpha-3 protein-coding 625843156 LOC116895783 glyceraldehyde-3-phosphate dehydrogenase-like 3 55043468 55067491 - 116895783 MODEL JAAIVD010000012 pseudo 625843157 LOC116906171 protein LSM14 homolog A-like 7 103819679 103822829 - 116906171 MODEL JAAIVD010000026 pseudo 625843158 Ern2 endoplasmic reticulum to nucleus signaling 2 ENCODES a protein that exhibits ATP binding (ortholog); endonuclease activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN apoptotic chromosome condensation (ortholog); intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum quality control compartment (ortholog); IRE1-TRAF2-ASK1 complex (ortholog) 2 79642929 79659331 + 22301074;30032202 116891556 MODEL JAAIVD010000001;XM_032892728;XM_032892729 XP_032748619;XP_032748620 serine/threonine-protein kinase/endoribonuclease IRE2 protein-coding 625843186 Trnaw-cca transfer RNA tryptophan (anticodon CCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 1 170258382 170258453 - 116890645 MODEL JAAIVD010000025 trna 625843187 LOC116887788 small nucleolar RNA SNORA18 18 27317345 27317475 + 116887788 MODEL JAAIVD010000013;XR_004386284 snorna 625843190 LOC116904573 ovostatin homolog 6 19118445 19160645 + 22301074 116904573 MODEL JAAIVD010000024;XM_032907372 XP_032763263 protein-coding 625843227 Socs7 suppressor of cytokine signaling 7 ENCODES a protein that exhibits phosphorylation-dependent protein binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN cerebral cortex radially oriented cell migration (ortholog); fat cell differentiation (ortholog); insulin receptor signaling pathway (ortholog); PARTICIPATES IN insulin signaling pathway; Jak-Stat signaling pathway; ASSOCIATED WITH ovarian carcinoma (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) 9 56986837 57024993 - 22301074;30032202 116908627 MODEL JAAIVD010000002;XM_032911879 XP_032767770 protein-coding 625843241 LOC116887183 peptidyl-prolyl cis-trans isomerase NIMA-interacting 4-like 18 470081 470515 + 116887183 MODEL JAAIVD010000013 pseudo 625843242 Spag4 sperm associated antigen 4 ENCODES a protein that exhibits identical protein binding (ortholog); FOUND IN microtubule (ortholog) 5 135426434 135431058 + 30032202 116902194 MODEL JAAIVD010000023;XM_032904558;XM_032904559 XP_032760449;XP_032760450 sperm-associated antigen 4 protein protein-coding 625843261 LOC116889841 28S ribosomal protein L42, mitochondrial 30032202 116889841 MODEL JAAIVD010001822;XM_032890674 XP_032746565 protein-coding 625843262 Ehd1 EH domain containing 1 ENCODES a protein that exhibits identical protein binding (ortholog); small GTPase binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); cholesterol homeostasis (ortholog); cilium assembly (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH Disease Progression (ortholog); high grade glioma (ortholog); Neoplasm Recurrence, Local (ortholog); FOUND IN ciliary pocket membrane (ortholog); ciliary transition zone (ortholog); cilium (ortholog) 2 1388026 1410637 - 22301074;30032202 116890667 MODEL JAAIVD010000001;XM_032891073 XP_032746964 EH domain-containing protein 1 protein-coding 625843271 Dmkn dermokine INVOLVED IN cornified envelope assembly (ortholog); establishment of skin barrier (ortholog); gene expression (ortholog); FOUND IN extracellular region (ortholog) 2 165236045 165252000 - 30032202 116894454 MODEL JAAIVD010000001;XM_032896158;XM_032896159;XM_032896160;XM_032896161 XP_032752049;XP_032752050;XP_032752051;XP_032752052 protein-coding 625843298 LOC116889685 elongation factor Tu-like 22301074;30032202 116889685 MODEL JAAIVD010000051;XM_032890573 XP_032746464 protein-coding 625843299 Dsc1 desmocollin 1 INVOLVED IN desmosome maintenance (ortholog); establishment of skin barrier (ortholog); hair follicle morphogenesis (ortholog); ASSOCIATED WITH Chronic Periodontitis (ortholog); melanoma (ortholog); FOUND IN desmosome (ortholog) 15 23417776 23443229 + 22301074;30032202 116884690 MODEL JAAIVD010000010;XM_032885873;XM_032885874;XM_032885875;XM_032885876 XP_032741764;XP_032741765;XP_032741766;XP_032741767 desmocollin-1 protein-coding 625843323 Fam163b family with sequence similarity 163 member B 5 9517577 9547857 + 116901243 MODEL JAAIVD010000023;XM_032902993 XP_032758884 protein FAM163B protein-coding 625843330 Pnoc prepronociceptin ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN behavioral response to ethanol (ortholog); cellular response to ethanol (ortholog); chemical synaptic transmission (ortholog); ASSOCIATED WITH Acute Alcohol Sensitivity (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN synaptic membrane (ortholog) 12 59006224 59033496 + 22301074;30032202 116913822 MODEL JAAIVD010000007;XM_032918134;XM_032918135;XM_032918136 XP_032774025;XP_032774026;XP_032774027 protein-coding 625843344 Tfe3 transcription factor binding to IGHM enhancer 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN humoral immune response (ortholog); lysosome organization (ortholog); negative regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog); INTELLECTUAL DEVELOPMENTAL DISORDER, X-LINKED, SYNDROMIC, WITH PIGMENTARY MOSAICISM AND COARSE FACIES (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lysosomal membrane (ortholog) X 14357966 14370491 - 22301074;30032202 116888741 MODEL JAAIVD010000014;XM_032890034 XP_032745925 transcription factor E3 protein-coding 625843358 Hrg histidine rich glycoprotein ENCODES a protein that exhibits heme binding (ortholog); heparan sulfate proteoglycan binding (ortholog); heparin binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); defense response to fungus (ortholog); negative regulation of angiogenesis (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Carotid Atherosclerosis (ortholog); hemorrhagic disease (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog) 4 7621990 7632672 + 22301074;30032202 116897810 MODEL JAAIVD010000003;XM_032899225 XP_032755116 histidine-rich glycoprotein protein-coding 625843369 LOC116888561 spindlin-2-like X 19291502 19292331 - 22301074;30032202 116888561 MODEL JAAIVD010000014;XM_032889866 XP_032745757 protein-coding 625843374 Inpp5f inositol polyphosphate-5-phosphatase F ENCODES a protein that exhibits inositol monophosphate 4-phosphatase activity (ortholog); phosphatidylinositol phosphate 4-phosphatase activity (ortholog); phosphatidylinositol phosphate 5-phosphatase activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); cardiac muscle hypertrophy in response to stress (ortholog); clathrin-dependent endocytosis (ortholog); FOUND IN axon (ortholog); clathrin-coated endocytic vesicle (ortholog); clathrin-coated pit (ortholog) 2 73250815 73329728 - 30032202 116891431 MODEL JAAIVD010000001;XM_032892484;XM_032892485;XM_032892486 XP_032748375;XP_032748376;XP_032748377 phosphatidylinositide phosphatase SAC2 protein-coding 625843404 Tigar TP53 induced glycolysis regulatory phosphatase ENCODES a protein that exhibits fructose-2,6-bisphosphate 2-phosphatase activity (ortholog); INVOLVED IN cellular response to cobalt ion (ortholog); cellular response to hypoxia (ortholog); DNA damage response (ortholog); ASSOCIATED WITH Nerve Degeneration (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial outer membrane (ortholog) 6 20799726 20814642 + 30032202 116903829 MODEL JAAIVD010000024;XM_032906541 XP_032762432 fructose-2,6-bisphosphatase TIGAR protein-coding 625843414 Psmc2 proteasome 26S subunit, ATPase 2 ENCODES a protein that exhibits general transcription initiation factor binding (ortholog); proteasome-activating activity (ortholog); TBP-class protein binding (ortholog); INVOLVED IN regulation of AMPA receptor activity (ortholog); ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); cytosol (ortholog); P-body (ortholog) 6 151089514 151104003 + 22301074;30032202 116904181 MODEL JAAIVD010000024;XM_032907090 XP_032762981 26S proteasome regulatory subunit 7 protein-coding 625843430 LOC116886667 histone H3.3A-like 17 8089275 8089794 + 22301074;30032202 116886667 MODEL JAAIVD010000011;XM_032888161 XP_032744052 protein-coding 625843435 LOC116885032 small Cajal body-specific RNA 17 15 57217500 57217639 + 116885032 MODEL JAAIVD010000010;XR_004385919 ncrna 625843438 LOC116889165 melanoma-associated antigen 10-like X 124417275 124422624 + 30032202 116889165 MODEL JAAIVD010000014;XM_032890333 XP_032746224 protein-coding 625843446 LOC116886593 dynactin subunit 6-like 17 5581742 5657387 - 116886593 MODEL JAAIVD010000011 pseudo 625843447 LOC116904681 small nucleolar RNA SNORA44 6 53079525 53079655 - 116904681 MODEL JAAIVD010000024;XR_004388379 snorna 625843450 LOC116897637 small Cajal body-specific RNA 7 3 86213578 86213904 + 116897637 MODEL JAAIVD010000012;XR_004387616 ncrna 625843453 Arhgef15 Rho guanine nucleotide exchange factor 15 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN negative regulation of synapse maturation (ortholog); positive regulation of Rho protein signal transduction (ortholog); positive regulation of stress fiber assembly (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH brain small vessel disease 5 with osteoporosis (ortholog); developmental and epileptic encephalopathy (ortholog); prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) 9 48541099 48554210 - 22301074;30032202 116910100 MODEL JAAIVD010000002;XM_032913927 XP_032769818 protein-coding 625843474 Nkx6-2 NK6 homeobox 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell differentiation (ortholog); central nervous system myelination (ortholog); endocrine pancreas development (ortholog); ASSOCIATED WITH genetic disease (ortholog); spastic ataxia 8 (ortholog); FOUND IN nucleus (ortholog) 2 62275057 62276603 + 22301074;30032202 116891360 MODEL JAAIVD010000001;XM_032892356 XP_032748247 homeobox protein Nkx-6.2 protein-coding 625843481 LOC116900850 40S ribosomal protein S7-like 5 61824229 61827063 - 116900850 MODEL JAAIVD010000023 pseudo 625843482 LOC116887613 HLA class I histocompatibility antigen, alpha chain F-like 18 9711504 9720744 - 116887613 MODEL JAAIVD010000013 pseudo 625843483 LOC116894328 growth factor receptor-bound protein 2-like 2 151697731 151698845 + 116894328 MODEL JAAIVD010000001 pseudo 625843484 Ppef2 protein phosphatase with EF-hand domain 2 ENCODES a protein that exhibits Hsp70 protein binding (ortholog); Hsp90 protein binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); negative regulation of apoptotic signaling pathway (ortholog); negative regulation of MAPK cascade (ortholog) 11 5072798 5098579 - 22301074;30032202 116912648 MODEL JAAIVD010000006;XM_032916766 XP_032772657 serine/threonine-protein phosphatase with EF-hands 2 protein-coding 625843503 Casp4 caspase 4 ENCODES a protein that exhibits CARD domain binding (ortholog); cysteine-type endopeptidase activity (ortholog); lipid binding (ortholog); INVOLVED IN cellular response to amyloid-beta (ortholog); defense response to bacterium (ortholog); defense response to Gram-positive bacterium (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); intellectual disability (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 8 2175169 2210060 - 22301074;30032202 116907192 MODEL JAAIVD010000027;XM_032910154;XM_032910155;XR_004388809 XP_032766045;XP_032766046 caspase-4 protein-coding 625843521 LOC116885119 small nucleolar RNA SNORA2/SNORA34 family 15 36225631 36225759 + 116885119 MODEL JAAIVD010000010 pseudo 625843522 LOC116885380 cytochrome P450 3A1-like 1 43281079 43316027 + 22301074;30032202 116885380 MODEL JAAIVD010000025;XM_032886661 XP_032742552 protein-coding 625843537 Bmal1 basic helix-loop-helix ARNT like 1 ENCODES a protein that exhibits aryl hydrocarbon receptor binding (ortholog); bHLH transcription factor binding (ortholog); DNA binding (ortholog); INVOLVED IN autophagy (ortholog); circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol withdrawal syndrome (ortholog); antidepressant type abuse (ortholog); FOUND IN chromatoid body (ortholog); CLOCK-BMAL transcription complex (ortholog); cytoplasm (ortholog) 2 88215187 88280082 - 22301074;30032202 116891641 MODEL JAAIVD010000001;XM_032892855;XM_032892856;XM_032892857;XM_032892858;XM_032892859;XM_032892860 XP_032748746;XP_032748747;XP_032748748;XP_032748749;XP_032748750;XP_032748751 Arntl aryl hydrocarbon receptor nuclear translocator like;aryl hydrocarbon receptor nuclear translocator-like protein 1 protein-coding 625843577 LOC116912058 zinc finger protein 54-like 11 96658411 96688939 - 30032202 116912058 MODEL JAAIVD010000006;XM_032915923 XP_032771814 protein-coding 625843585 LOC116904056 26S proteasome non-ATPase regulatory subunit 1-like 1 142770625 142812345 - 116904056 MODEL JAAIVD010000025 pseudo 625843586 Faf1 Fas associated factor 1 ENCODES a protein that exhibits heat shock protein binding (ortholog); NF-kappaB binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN Fas signaling pathway (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of DNA replication (ortholog); PARTICIPATES IN aldosterone signaling pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear envelope (ortholog) 1 42324655 42660984 + 22301074;30032202 116890141 MODEL JAAIVD010000025;XM_032890912 XP_032746803 FAS-associated factor 1 protein-coding 625843611 LOC116887355 ferritin heavy polypeptide-like 17 18 44996042 44997130 + 22301074;30032202 116887355 MODEL JAAIVD010000013;XM_032888949 XP_032744840 protein-coding 625843615 LOC116905701 glyceraldehyde-3-phosphate dehydrogenase-like 7 20601571 20602575 + 116905701 MODEL JAAIVD010000026 pseudo 625843616 Prg3 proteoglycan 3, pro eosinophil major basic protein 2 INVOLVED IN basophil activation (ortholog); histamine biosynthetic process (ortholog); leukotriene biosynthetic process (ortholog) 5 62357871 62362888 + 22301074;30032202 116900231 MODEL JAAIVD010000023;XM_032901982 XP_032757873 proteoglycan 3 protein-coding 625843625 Fry FRY microtubule binding protein ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); INVOLVED IN negative regulation of tubulin deacetylation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hereditary breast ovarian cancer syndrome (ortholog); intellectual disability (ortholog) 16 3350452 3588001 - 30032202 116885536 MODEL JAAIVD010000004;XM_032886834 XP_032742725 protein furry homolog protein-coding 625843690 Iqgap2 IQ motif containing GTPase activating protein 2 ENCODES a protein that exhibits actin filament binding (ortholog); Arp2/3 complex binding (ortholog); calmodulin binding (ortholog); INVOLVED IN Arp2/3 complex-mediated actin nucleation (ortholog); regulation of actin cytoskeleton organization (ortholog); thrombin-activated receptor signaling pathway (ortholog); ASSOCIATED WITH Brain Neoplasms (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); filopodium (ortholog) 3 200637845 200912264 + 22301074;30032202 116896052 MODEL JAAIVD010000012;XM_032897047 XP_032752938 ras GTPase-activating-like protein IQGAP2 protein-coding 625843727 LOC116913187 ATP synthase F(0) complex subunit C3, mitochondrial-like 12 63154823 63157668 - 116913187 MODEL JAAIVD010000007 pseudo 625843728 LOC116914787 ubiquitin-40S ribosomal protein S27a-like 13 30585427 30586773 + 116914787 MODEL JAAIVD010000008 pseudo 625843729 Hif1an hypoxia inducible factor 1 subunit alpha inhibitor ENCODES a protein that exhibits [protein]-asparagine 3-dioxygenase activity (ortholog); ankyrin repeat binding (ortholog); carboxylic acid binding (ortholog); INVOLVED IN negative regulation of Notch signaling pathway (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of myoblast differentiation (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 2 44066280 44080152 + 30032202 116891214 MODEL JAAIVD010000001;XM_032892048 XP_032747939 hypoxia-inducible factor 1-alpha inhibitor protein-coding 625843741 Ccdc157 coiled-coil domain containing 157 ASSOCIATED WITH oligoasthenoteratozoospermia (ortholog) 11 73125209 73143689 - 116912845 MODEL JAAIVD010000006;XM_032917051 XP_032772942 coiled-coil domain-containing protein 157 protein-coding 625843757 LOC116888311 developmental pluripotency-associated protein 4-like X 48163444 48164255 + 116888311 MODEL JAAIVD010000014 pseudo 625843758 LOC116889332 uncharacterized LOC116889332 X 17145460 17147517 + 30032202 116889332 MODEL JAAIVD010000014;XM_032890450 XP_032746341 uncharacterized protein LOC116889332 protein-coding 625843762 Cdkn1c cyclin dependent kinase inhibitor 1C ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase inhibitor activity (ortholog); molecular function inhibitor activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN adrenal gland development (ortholog); camera-type eye development (ortholog); digestive system development (ortholog); PARTICIPATES IN G1/S transition pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Beckwith-Wiedemann syndrome (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 2 6238583 6241274 + 22301074 116890834 MODEL JAAIVD010000001;XM_032891355;XM_032891356;XM_032891357;XM_032891358 XP_032747246;XP_032747247;XP_032747248;XP_032747249 cyclin-dependent kinase inhibitor 1C protein-coding 625843777 Rsf1 remodeling and spacing factor 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); histone binding (ortholog); histone octamer slider activity (ortholog); INVOLVED IN chromatin organization (ortholog); chromatin remodeling (ortholog); DNA-templated transcription initiation (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RSF complex (ortholog) 2 95902178 96018058 + 30032202 116891704 MODEL JAAIVD010000001;XM_032892968 XP_032748859 protein-coding 625843797 LOC116905573 polyadenylate-binding protein 1-like 7 97130596 97131892 + 116905573 MODEL JAAIVD010000026 pseudo 625843798 Ptdss2 phosphatidylserine synthase 2 ENCODES a protein that exhibits CDP-diacylglycerol-serine O-phosphatidyltransferase activity (ortholog); L-serine-phosphatidylethanolamine phosphatidyltransferase activity (ortholog); INVOLVED IN phosphatidylserine biosynthetic process (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; FOUND IN endoplasmic reticulum membrane (ortholog); membrane (ortholog) 2 8317419 8341587 - 22301074 116890885 MODEL JAAIVD010000001;XM_032891495;XM_032891496;XM_032891497 XP_032747386;XP_032747387;XP_032747388 protein-coding 625843820 Ttll4 tubulin tyrosine ligase like 4 ENCODES a protein that exhibits protein-glutamic acid ligase activity (ortholog); tubulin binding (ortholog); tubulin-glutamic acid ligase activity (ortholog); INVOLVED IN peptidyl-glutamic acid modification (ortholog); protein polyglutamylation (ortholog); regulation of blastocyst development (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); ciliary basal body (ortholog) 4 148086070 148122439 + 30032202 116899510 MODEL JAAIVD010000003;XM_032901365 XP_032757256 tubulin polyglutamylase TTLL4 protein-coding 625843844 LOC116911892 U6 spliceosomal RNA 10 29141328 29141433 - 116911892 MODEL JAAIVD010000005;XR_004389402 snrna 625843847 LOC116897765 DNA-directed RNA polymerase II subunit GRINL1A-like 4 736183 737217 - 22301074;30032202 116897765 MODEL JAAIVD010000003;XM_032899196;XM_032899197 XP_032755087;XP_032755088 protein-coding 625843853 Nrarp NOTCH regulated ankyrin repeat protein INVOLVED IN blood vessel endothelial cell proliferation involved in sprouting angiogenesis (ortholog); branching involved in blood vessel morphogenesis (ortholog); negative regulation of Notch signaling pathway (ortholog); ASSOCIATED WITH Brain Neoplasms (ortholog) 5 12002334 12004896 - 22301074;30032202 116901321 MODEL JAAIVD010000023;XM_032903134 XP_032759025 notch-regulated ankyrin repeat-containing protein protein-coding 625843858 LOC116899290 glyceraldehyde-3-phosphate dehydrogenase-like 1 103144136 103144532 + 116899290 MODEL JAAIVD010000025 pseudo 625843859 Brms1l BRMS1 like transcriptional repressor FOUND IN nucleoplasm (ortholog) 7 69215367 69247454 + 30032202 116905065 MODEL JAAIVD010000026;XM_032907768 XP_032763659 breast cancer metastasis-suppressor 1-like protein protein-coding 625843873 LOC116893909 60S ribosomal protein L13-like 2 76951102 76951732 - 116893909 MODEL JAAIVD010000001 pseudo 625843874 LOC116896485 myomegalin 3 59420730 59617156 + 22301074 116896485 MODEL JAAIVD010000012;XM_032897650 XP_032753541 protein-coding 625843925 LOC116909407 hemoglobin subunit alpha-like 9 3565561 3566407 - 22301074;30032202 116909407 MODEL JAAIVD010000002;XM_032912974 XP_032768865 protein-coding 625843932 Crot carnitine O-octanoyltransferase ENCODES a protein that exhibits carnitine O-octanoyltransferase activity (ortholog); INVOLVED IN carnitine metabolic process (ortholog); cellular response to norepinephrine stimulus (ortholog); coenzyme A metabolic process (ortholog); PARTICIPATES IN adrenoleukodystrophy pathway; carnitine-acylcarnitine translocase deficiency; fatty acid beta degradation pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Left Ventricular Hypertrophy (ortholog); FOUND IN peroxisome (ortholog) 6 140816792 140848807 - 30032202 116904145 MODEL JAAIVD010000024;XM_032907040;XM_032907041;XM_032907042 XP_032762931;XP_032762932;XP_032762933 peroxisomal carnitine O-octanoyltransferase protein-coding 625843961 Kif22 kinesin family member 22 INVOLVED IN metaphase chromosome alignment (ortholog); mitotic metaphase chromosome alignment (ortholog); sister chromatid cohesion (ortholog); ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog); spondyloepimetaphyseal dysplasia with joint laxity type 2 (ortholog); FOUND IN chromatin (ortholog); mitotic spindle (ortholog); nuclear speck (ortholog) 2 74852172 74865678 + 22301074;30032202 116891489 MODEL JAAIVD010000001;XM_032892593 XP_032748484 kinesin-like protein KIF22 protein-coding 625843979 LOC116886937 eukaryotic translation initiation factor 3 subunit G-like 18 23003140 23004058 + 116886937 MODEL JAAIVD010000013 pseudo 625843980 LOC116889875 uncharacterized LOC116889875 1 155727117 155728573 + 30032202 116889875 MODEL JAAIVD010000025;XM_032890700 XP_032746591 uncharacterized protein LOC116889875 protein-coding 625843986 Lpar2 lysophosphatidic acid receptor 2 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); positive regulation of MAPK cascade (ortholog); positive regulation of Rho protein signal transduction (ortholog); FOUND IN cell surface (ortholog); endocytic vesicle (ortholog); glutamatergic synapse (ortholog) 13 12084722 12089667 + 22301074 116914905 MODEL JAAIVD010000008;XM_032919345 XP_032775236 protein-coding 625843993 LOC116890734 stimulated by retinoic acid gene 6 protein-like 1 620783 661027 - 22301074;30032202 116890734 MODEL JAAIVD010000025;XM_032891193 XP_032747084 protein-coding 625844015 Kdelr2 KDEL endoplasmic reticulum protein retention receptor 2 ENCODES a protein that exhibits KDEL sequence binding (ortholog); INVOLVED IN maintenance of protein localization in endoplasmic reticulum (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); ASSOCIATED WITH osteogenesis imperfecta type 21 (ortholog); FOUND IN cis-Golgi network (ortholog); COPI-coated vesicle membrane (ortholog); endoplasmic reticulum (ortholog) 16 9724803 9742963 - 22301074;30032202 116885346 MODEL JAAIVD010000004;XM_032886621;XM_032886622 XP_032742512;XP_032742513 ER lumen protein-retaining receptor 2 protein-coding 625844028 Lax1 lymphocyte transmembrane adaptor 1 ENCODES a protein that exhibits protein kinase binding (ortholog); SH2 domain binding (ortholog); INVOLVED IN antigen receptor-mediated signaling pathway (ortholog); B cell activation (ortholog); immune response (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); membrane (ortholog) 10 1999452 2010173 + 22301074;30032202 116911315 MODEL JAAIVD010000005;XM_032915230 XP_032771121 lymphocyte transmembrane adapter 1 protein-coding 625844038 LOC116906498 U2 spliceosomal RNA 7 52855738 52855913 + 116906498 MODEL JAAIVD010000026 pseudo 625844039 LOC116907184 nucleolysin TIAR-like 8 1557434 1558222 - 116907184 MODEL JAAIVD010000027 pseudo 625844040 LOC116908110 zinc finger protein 345-like 8 16751492 16759691 + 30032202 116908110 MODEL JAAIVD010000027;XM_032911390;XM_032911391 XP_032767281;XP_032767282 protein-coding 625844052 Cfap418 cilia and flagella associated protein 418 INVOLVED IN photoreceptor cell morphogenesis (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome 21 (ortholog); cone-rod dystrophy (ortholog); cone-rod dystrophy 16 (ortholog); FOUND IN ciliary base (ortholog); cytoplasm (ortholog); photoreceptor inner segment (ortholog) 1 132796044 132814729 - 30032202 116903472 MODEL JAAIVD010000025;XM_032906042;XM_032906049 XP_032761933;XP_032761940 C1H8orf37 chromosome 1 C8orf37 homolog;protein C8orf37 homolog protein-coding 625844064 Dyrk2 dual specificity tyrosine phosphorylation regulated kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); manganese ion binding (ortholog); INVOLVED IN DNA damage response (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); negative regulation of calcineurin-NFAT signaling cascade (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 1 196815645 196828812 - 22301074;30032202 116909378 MODEL JAAIVD010000025;XM_032912935 XP_032768826 dual specificity tyrosine-phosphorylation-regulated kinase 2 protein-coding 625844071 Ptchd1 patched domain containing 1 INVOLVED IN cognition (ortholog); smoothened signaling pathway (ortholog); social behavior (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN dendritic spine (ortholog); plasma membrane (ortholog) X 34543288 34598627 - 30032202 116888542 MODEL JAAIVD010000014;XM_032889853 XP_032745744 patched domain-containing protein 1 protein-coding 625844078 Casz1 castor zinc finger 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of amacrine cell differentiation (ortholog); negative regulation of cell differentiation (ortholog); negative regulation of neuron differentiation (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); autism spectrum disorder (ortholog); chromosome 1p36 deletion syndrome (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog) 1 11819391 11870936 - 30032202 116892709 MODEL JAAIVD010000025;XM_032894574 XP_032750465 zinc finger protein castor homolog 1 protein-coding 625844101 LOC116884348 G2/mitotic-specific cyclin-B2-like 15 34626127 34627986 - 116884348 MODEL JAAIVD010000010 pseudo 625844102 Neurl2 neuralized E3 ubiquitin protein ligase 2 INVOLVED IN myofibril assembly (ortholog); sarcomere organization (ortholog); PARTICIPATES IN Notch signaling pathway; FOUND IN muscle tendon junction (ortholog); VCB complex (ortholog) 5 153125596 153128328 + 22301074;30032202 116902343 MODEL JAAIVD010000023;XM_032904825 XP_032760716 neuralized-like protein 2 protein-coding 625844108 LOC116894727 serine/threonine-protein kinase PAK 1-like 2 42087154 42089575 - 116894727 MODEL JAAIVD010000001 pseudo 625844109 LOC116914327 60S ribosomal protein L7-like 13 45887755 45893334 - 116914327 MODEL JAAIVD010000008 pseudo 625844110 LOC116910362 uncharacterized LOC116910362 9 74152568 74167868 - 116910362 MODEL JAAIVD010000002;XM_032914214 XP_032770105 uncharacterized protein LOC116910362 protein-coding 625844121 LOC116899805 small nucleolar RNA SNORA63 4 7902103 7902231 + 116899805 MODEL JAAIVD010000003;XR_004387807 snorna 625844124 Polr1b RNA polymerase I subunit B ENCODES a protein that exhibits DNA-directed RNA polymerase activity (ortholog); DNA/RNA hybrid binding (ortholog); zinc ion binding (ortholog); INVOLVED IN embryo implantation (ortholog); nucleologenesis (ortholog); rRNA transcription (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH Mandibulofacial Dysostosis (ortholog); Treacher Collins syndrome (ortholog); Treacher Collins syndrome 4 (ortholog); FOUND IN chromosome (ortholog); fibrillar center (ortholog); nucleolus (ortholog) 5 107871216 107894762 + 22301074;30032202 116901955 MODEL JAAIVD010000023;XM_032904192 XP_032760083 DNA-directed RNA polymerase I subunit RPA2 protein-coding 625844143 Stat1 signal transducer and activator of transcription 1 ENCODES a protein that exhibits CCR5 chemokine receptor binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN blood circulation (ortholog); cell population proliferation (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; erythropoietin signaling pathway; fibroblast growth factor signaling pathway; ASSOCIATED WITH angiomyolipoma (ortholog); Brain Injuries (ortholog); breast cancer (ortholog); FOUND IN axon (ortholog); chromatin (ortholog); cytoplasm (ortholog) 4 123267793 123306466 - 30032202 116899374 MODEL JAAIVD010000003;XM_032901090 XP_032756981 signal transducer and activator of transcription 1-alpha/beta protein-coding 625844172 Barhl1 BarH like homeobox 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN midbrain development (ortholog); negative regulation of neuron apoptotic process (ortholog); neuron migration (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Hearing Loss (ortholog); high grade glioma (ortholog); FOUND IN nucleus (ortholog) 5 7756803 7764300 + 22301074;30032202 116901222 MODEL JAAIVD010000023;XM_032902947 XP_032758838 barH-like 1 homeobox protein protein-coding 625844179 LOC116900131 olfactory receptor 3 5 14518505 14519446 - 22301074;30032202 116900131 MODEL JAAIVD010000023;XM_032901904 XP_032757795 protein-coding 625844182 Eva1b eva-1 homolog B 1 32140911 32142471 - 116896680 MODEL JAAIVD010000025;XM_032898065;XM_032898078;XM_032898086;XM_032898095;XR_004387356 XP_032753956;XP_032753969;XP_032753977;XP_032753986 protein eva-1 homolog B protein-coding 625844203 Pdcl2 phosducin like 2 INVOLVED IN acrosome assembly (ortholog); flagellated sperm motility (ortholog); sperm axoneme assembly (ortholog); ASSOCIATED WITH male infertility (ortholog); FOUND IN endoplasmic reticulum (ortholog) 11 33050233 33070264 - 30032202 116912351 MODEL JAAIVD010000006;XM_032916405 XP_032772296 phosducin-like protein 2 protein-coding 625844213 Sack1b scaffolding CK1 anchoring protein B ENCODES a protein that exhibits D-type glycerophospholipase activity (ortholog); epidermal growth factor receptor binding (ortholog); phosphatidylinositol 3-kinase catalytic subunit binding (ortholog); INVOLVED IN cell population proliferation (ortholog); positive regulation of epidermal growth factor receptor signaling pathway (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog) 8 70753567 70805257 - 30032202 116907493 MODEL JAAIVD010000027;XM_032910485 XP_032766376 Fam83b family with sequence similarity 83 member B;protein FAM83B APPROVED protein-coding 625844221 LOC116891950 uncharacterized LOC116891950 2 121197611 121226518 + 116891950 MODEL JAAIVD010000001;XR_004386874;XR_004386875 ncrna 625844229 LOC116893271 sperm motility kinase X-like 2 143819929 143820983 + 116893271 MODEL JAAIVD010000001 pseudo 625844230 Ppp1r36 protein phosphatase 1 regulatory subunit 36 ASSOCIATED WITH autistic disorder (ortholog) 7 90574185 90594005 + 22301074;30032202 116905183 MODEL JAAIVD010000026;XM_032907967 XP_032763858 protein-coding 625844245 Ly6d lymphocyte antigen 6 family member D INVOLVED IN lymphocyte differentiation (ortholog); response to stilbenoid (ortholog); FOUND IN cell surface (ortholog) 1 247500793 247502327 - 30032202 116890133 MODEL JAAIVD010000025;XM_032890870 XP_032746761 lymphocyte antigen 6D protein-coding 625844252 Marveld1 MARVEL domain containing 1 ASSOCIATED WITH COVID-19 (ortholog); disease of cellular proliferation (ortholog) 2 41257123 41261725 + 22301074;30032202 116893071 MODEL JAAIVD010000001;XM_032895029 XP_032750920 MARVEL domain-containing protein 1 protein-coding 625844258 Grin3a glutamate ionotropic receptor NMDA type subunit 3A ENCODES a protein that exhibits calcium channel activity (ortholog); glutamate-gated receptor activity (ortholog); glycine binding (ortholog); INVOLVED IN calcium ion transport (ortholog); dendrite development (ortholog); ionotropic glutamate receptor signaling pathway (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH impotence (ortholog); myoepithelioma (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); membrane (ortholog) 7 57041420 57234313 + 22301074;30032202 116904994 MODEL JAAIVD010000026;XM_032907677;XM_032907678;XM_032907679 XP_032763568;XP_032763569;XP_032763570 glutamate receptor ionotropic, NMDA 3A protein-coding 625844275 LOC116893566 60S ribosomal protein L10a-like 2 217772833 217773535 - 22301074 116893566 MODEL JAAIVD010000001;XM_032895272 XP_032751163 protein-coding 625844278 LOC116905267 40S ribosomal protein S25-like 7 51035754 51036130 + 116905267 MODEL JAAIVD010000026 pseudo 625844279 Asb1 ankyrin repeat and SOCS box containing 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN male genitalia development (ortholog); protein ubiquitination (ortholog); FOUND IN ubiquitin ligase complex (ortholog) 4 163526328 163542123 + 22301074;30032202 116899643 MODEL JAAIVD010000003;XM_032901644;XM_032901645 XP_032757535;XP_032757536 ankyrin repeat and SOCS box protein 1 protein-coding 625844292 Mtcl2 microtubule crosslinking factor 2 INVOLVED IN chromosome segregation (ortholog); insulin receptor signaling pathway (ortholog); negative regulation of gluconeogenesis (ortholog); FOUND IN extracellular region (ortholog); microtubule (ortholog); midbody (ortholog) 5 136350615 136418522 - 22301074;30032202 116902216 MODEL JAAIVD010000023;XM_032904619 XP_032760510 Soga1 protein SOGA1;suppressor of glucose, autophagy associated 1 protein-coding 625844311 LOC116900663 60S ribosomal protein L18-like 5 126587233 126587804 - 116900663 MODEL JAAIVD010000023 pseudo 625844312 LOC116887447 selection and upkeep of intraepithelial T-cells protein 7-like 1 44563192 44571629 + 30032202 116887447 MODEL JAAIVD010000025;XM_032889058 XP_032744949 protein-coding 625844320 LOC116900675 cystatin-9-like 5 128376249 128379073 + 22301074;30032202 116900675 MODEL JAAIVD010000023;XM_032902380 XP_032758271 protein-coding 625844327 Timm8a translocase of inner mitochondrial membrane 8A ENCODES a protein that exhibits identical protein binding (ortholog); zinc ion binding (ortholog); INVOLVED IN protein insertion into mitochondrial inner membrane (ortholog); protein localization to mitochondrion (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; ASSOCIATED WITH Animal Disease Models (ortholog); Auditory Neuropathy (ortholog); deafness-dystonia-optic neuronopathy syndrome (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrial intermembrane space chaperone complex (ortholog); mitochondrion (ortholog) X 86843307 86847478 - 116888954 MODEL JAAIVD010000014;XM_032890182 XP_032746073 mitochondrial import inner membrane translocase subunit Tim8 A protein-coding 625844333 LOC116888904 eukaryotic translation initiation factor 5-like X 99860498 99861998 - 22301074;30032202 116888904 MODEL JAAIVD010000014;XM_032890162 XP_032746053 protein-coding 625844338 Gucy2c guanylate cyclase 2C ENCODES a protein that exhibits guanylate cyclase activity (ortholog); toxic substance binding (ortholog); INVOLVED IN regulation of cell population proliferation (ortholog); response to toxic substance (ortholog); ASSOCIATED WITH abdominal obesity-metabolic syndrome (ortholog); Colorectal Neoplasms (ortholog); congenital diarrhea 6 (ortholog) 6 12683005 12760992 + 22301074;30032202 116903154 MODEL JAAIVD010000024;XM_032905518 XP_032761409 heat-stable enterotoxin receptor protein-coding 625844369 Ripk3 receptor interacting serine/threonine kinase 3 ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); amyloid fibril formation (ortholog); cellular response to hydrogen peroxide (ortholog); ASSOCIATED WITH Acute-On-Chronic Liver Failure (ortholog); adult respiratory distress syndrome (ortholog); avian influenza (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 12 69214912 69218677 + 22301074;30032202 116913783 MODEL JAAIVD010000007;XM_032918089 XP_032773980 receptor-interacting serine/threonine-protein kinase 3 protein-coding 625844382 LOC116907651 microtubule-associated protein 4 8 100546833 100642999 + 30032202 116907651 MODEL JAAIVD010000027;XM_032910739;XM_032910740;XM_032910741 XP_032766630;XP_032766631;XP_032766632 protein-coding 625844402 Fgf3 fibroblast growth factor 3 INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); negative regulation of cardiac muscle tissue development (ortholog); organ induction (ortholog); ASSOCIATED WITH Acute Otitis Media (ortholog); Breast Neoplasms (ortholog); cleft lip (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog) 2 4891468 4895673 - 22301074;30032202 116893611 MODEL JAAIVD010000001;XM_032895318 XP_032751209 protein-coding 625844409 Steep1 STING1 ER exit protein 1 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN endoplasmic reticulum membrane organization (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH non-syndromic X-linked intellectual disability 107 (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) X 103031032 103042325 - 116889351 MODEL JAAIVD010000014;XM_032890461 XP_032746352 CXHXorf56 UPF0428 protein CXorf56 homolog;chromosome X CXorf56 homolog protein-coding 625844420 Asb16 ankyrin repeat and SOCS box containing 16 9 61565892 61572000 + 22301074;30032202 116910244 MODEL JAAIVD010000002;XM_032914131 XP_032770022 ankyrin repeat and SOCS box protein 16 protein-coding 625844428 LOC116889200 60S ribosomal protein L35-like X 51558167 51558563 + 116889200 MODEL JAAIVD010000014 pseudo 625844429 Vps54 VPS54 subunit of GARP complex INVOLVED IN apoptotic DNA fragmentation (ortholog); astrocyte differentiation (ortholog); cellular response to progesterone stimulus (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); Nerve Degeneration (ortholog); tooth agenesis (ortholog); FOUND IN cytoplasm (ortholog); GARP complex (ortholog); Golgi apparatus (ortholog) 11 89428683 89504206 + 22301074;30032202 116912431 MODEL JAAIVD010000006;XM_032916499 XP_032772390 vacuolar protein sorting-associated protein 54 protein-coding 625844455 LOC116885601 40S ribosomal protein S13-like 16 19061764 19062326 + 116885601 MODEL JAAIVD010000004 pseudo 625844456 Gpr65 G protein-coupled receptor 65 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cellular response to acidic pH (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH ulcerative colitis (ortholog); FOUND IN early endosome membrane (ortholog); late endosome membrane (ortholog); plasma membrane (ortholog) 7 111442599 111444521 + 22301074 116905853 MODEL JAAIVD010000026;XM_032908830 XP_032764721 psychosine receptor protein-coding 625844461 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92691004 92691075 + 116904836 MODEL JAAIVD010000024 trna 625844462 LOC116907366 olfactory receptor 143-like 8 32167141 32168094 + 22301074;30032202 116907366 MODEL JAAIVD010000027;XM_032910317 XP_032766208 protein-coding 625844466 Cnksr2 connector enhancer of kinase suppressor of Ras 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase binding (ortholog); INVOLVED IN intracellular signal transduction (ortholog); postsynapse organization (ortholog); postsynaptic specialization organization (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN extrinsic component of postsynaptic density membrane (ortholog); glutamatergic synapse (ortholog); neuronal cell body (ortholog) X 36461492 36688780 + 22301074 116887830 MODEL JAAIVD010000014;XM_032889343 XP_032745234 protein-coding 625844491 LOC116889106 BTB/POZ domain-containing protein 10-like X 90355848 90357145 - 22301074;30032202 116889106 MODEL JAAIVD010000014;XM_032890272 XP_032746163 protein-coding 625844495 Prelid3b PRELI domain containing 3B FOUND IN mitochondrion (ortholog) 5 143506126 143514150 + 30032202 116902263 MODEL JAAIVD010000023;XM_032904683 XP_032760574 PRELI domain containing protein 3B protein-coding 625844505 Prdm10 PR/SET domain 10 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Birt-Hogg-Dube syndrome (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 8 27002378 27103109 + 30032202 116906633 MODEL JAAIVD010000027;XM_032909393;XM_032909394 XP_032765284;XP_032765285 PR domain zinc finger protein 10 protein-coding 625844532 LOC116893066 cytochrome P450 2C6-like 2 38843396 38851537 + 116893066 MODEL JAAIVD010000001 pseudo 625844533 LOC116913283 elongation factor Tu, mitochondrial-like 12 87632218 87633584 - 116913283 MODEL JAAIVD010000007 pseudo 625844534 Syn2 synapsin II ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN calcium-ion regulated exocytosis (ortholog); neurotransmitter secretion (ortholog); synaptic vesicle clustering (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); COVID-19 (ortholog); epilepsy (ortholog); FOUND IN extrinsic component of synaptic vesicle membrane (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) 6 31427870 31542973 - 22301074;30032202 116903386 MODEL JAAIVD010000024;XM_032905883 XP_032761774 synapsin-2 protein-coding 625844551 LOC116887628 olfactory receptor 11A1-like 18 10409057 10409624 - 116887628 MODEL JAAIVD010000013 pseudo 625844552 Plekhh2 pleckstrin homology, MyTH4 and FERM domain containing H2 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN negative regulation of actin filament depolymerization (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cortical actin cytoskeleton (ortholog); cytoplasm (ortholog); lamellipodium (ortholog) 7 8291196 8395806 - 22301074;30032202 116905779 MODEL JAAIVD010000026;XM_032908753 XP_032764644 pleckstrin homology domain-containing family H member 2 protein-coding 625844586 LOC116904668 small nucleolar RNA SNORA72 6 157806357 157806484 - 116904668 MODEL JAAIVD010000024;XR_004388368 snorna 625844589 LOC116895510 serine/arginine-rich splicing factor 3-like 3 113412735 113413320 + 116895510 MODEL JAAIVD010000012 pseudo 625844590 LOC116890328 U6 spliceosomal RNA 1 17062487 17062593 - 116890328 MODEL JAAIVD010000025;XR_004386551 snrna 625844593 Srrm3 serine/arginine repetitive matrix 3 INVOLVED IN negative regulation of insulin secretion (ortholog); RNA splicing (ortholog) 16 18149174 18189841 - 30032202 116885236 MODEL JAAIVD010000004;XM_032886475;XM_032886476 XP_032742366;XP_032742367 serine/arginine repetitive matrix protein 3 protein-coding 625844617 Nyap1 neuronal tyrosine phosphorylated phosphoinositide-3-kinase adaptor 1 INVOLVED IN neuron projection morphogenesis (ortholog); phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog) 16 16282132 16293479 + 30032202 116885472 MODEL JAAIVD010000004;XM_032886754 XP_032742645 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 1 protein-coding 625844628 Siglec1 sialic acid binding Ig like lectin 1 ENCODES a protein that exhibits virion binding (ortholog); INVOLVED IN clathrin-dependent endocytosis (ortholog); clathrin-dependent endocytosis of virus by host cell (ortholog); negative regulation of phagocytosis (ortholog); ASSOCIATED WITH Human Influenza (ortholog); FOUND IN early endosome (ortholog); endocytic vesicle (ortholog); late endosome (ortholog) 5 110804315 110823391 - 116900638 MODEL JAAIVD010000023;XM_032902350 XP_032758241 sialoadhesin protein-coding 625844652 LOC116888397 claudin-34-like X 36839482 36840117 - 30032202 116888397 MODEL JAAIVD010000014;XM_032889674 XP_032745565 protein-coding 625844655 Tslp thymic stromal lymphopoietin ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-7 receptor binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); cytokine-mediated signaling pathway (ortholog); ASSOCIATED WITH Albuminuria (ortholog); allergic contact dermatitis (ortholog); allergic disease (ortholog); FOUND IN extracellular region (ortholog) 15 11440205 11445795 - 22301074;30032202 116884921 MODEL JAAIVD010000010;XM_032886143 XP_032742034 protein-coding 625844663 C3H1orf54 chromosome 3 C1orf54 homolog 3 61397518 61407431 + 116896532 MODEL JAAIVD010000012;XM_032897712;XM_032897713 XP_032753603;XP_032753604 uncharacterized protein C1orf54 homolog protein-coding 625844678 Srgn serglycin ENCODES a protein that exhibits collagen binding (ortholog); INVOLVED IN granzyme-mediated programmed cell death signaling pathway (ortholog); maintenance of granzyme B location in T cell secretory granule (ortholog); maintenance of protease location in mast cell secretory granule (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN extracellular region (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) 18 28323067 28343154 - 30032202 116887033 MODEL JAAIVD010000013;XM_032888525 XP_032744416 protein-coding 625844687 Spn sialophorin ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); cell surface receptor signaling pathway (ortholog); chronic inflammatory response (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); calcinosis (ortholog); Experimental Arthritis (ortholog); FOUND IN basement membrane (ortholog); cell surface (ortholog); cleavage furrow (ortholog) 2 74744429 74755537 + 30032202 116893898 MODEL JAAIVD010000001;XM_032895620;XM_032895621 XP_032751511;XP_032751512 leukosialin protein-coding 625844695 Dele1 DAP3 binding cell death enhancer 1 ENCODES a protein that exhibits protein kinase binding (ortholog); protein serine/threonine kinase activator activity (ortholog); INVOLVED IN cellular response to stress (ortholog); DNA damage response (ortholog); extrinsic apoptotic signaling pathway via death domain receptors (ortholog); FOUND IN cytosol (ortholog); mitochondrial inner membrane (ortholog); mitochondrial outer membrane (ortholog) 15 6665118 6678217 - 22301074 116884501 MODEL JAAIVD010000010;XM_032885631;XM_032885632 XP_032741522;XP_032741523 death ligand signal enhancer protein-coding 625844713 Pptc7 protein phosphatase targeting COQ7 ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN negative regulation of mitophagy (ortholog); positive regulation of ubiquinone biosynthetic process (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 16 31525594 31564035 - 116885806 MODEL JAAIVD010000004;XM_032887139 XP_032743030 protein phosphatase PTC7 homolog protein-coding 625844723 Rem2 RRAD and GEM like GTPase 2 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog) 12 70518872 70523118 - 22301074;30032202 116913826 MODEL JAAIVD010000007;XM_032918139 XP_032774030 GTP-binding protein REM 2 protein-coding 625844732 Rpl19 ribosomal protein L19 ENCODES a protein that exhibits 5.8S rRNA binding (ortholog); large ribosomal subunit rRNA binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); liver regeneration (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH congenital hypoplastic anemia (ortholog); Diamond-Blackfan anemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic large ribosomal subunit (ortholog) 9 56354298 56357678 - 22301074;30032202 116909511 MODEL JAAIVD010000002;XM_032913115 XP_032769006 60S ribosomal protein L19 protein-coding 625844742 LOC116888678 forkhead box protein E1 1 99423772 99426586 + 30032202 116888678 MODEL JAAIVD010000025;XM_032889976 XP_032745867 protein-coding 625844747 Hfm1 helicase for meiosis 1 INVOLVED IN resolution of meiotic recombination intermediates (ortholog); ASSOCIATED WITH azoospermia (ortholog); hereditary breast ovarian cancer syndrome (ortholog); primary ovarian insufficiency 16 (ortholog); FOUND IN Golgi apparatus (ortholog) 11 16607398 16689392 - 22301074 116912477 MODEL JAAIVD010000006;XM_032916541 XP_032772432 probable ATP-dependent DNA helicase HFM1 protein-coding 625844789 LOC116907978 zinc finger and SCAN domain containing protein 4F-like 1 158346396 158349552 + 30032202 116907978 MODEL JAAIVD010000025;XM_032911257 XP_032767148 protein-coding 625844795 LOC116895010 small nucleolar RNA SNORA48 2 177749160 177749301 + 116895010 MODEL JAAIVD010000001;XR_004387198 snorna 625844798 Ccdc87 coiled-coil domain containing 87 INVOLVED IN positive regulation of acrosome reaction (ortholog); positive regulation of fertilization (ortholog) 2 2817324 2819923 - 116893596 MODEL JAAIVD010000001;XM_032895299 XP_032751190 coiled-coil domain-containing protein 87 protein-coding 625844802 Kif1b kinesin family member 1B ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); kinase binding (ortholog); microtubule motor activity (ortholog); INVOLVED IN anterograde neuronal dense core vesicle transport (ortholog); anterograde synaptic vesicle transport (ortholog); apoptotic process involved in development (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH adrenal gland pheochromocytoma (ortholog); amyotrophic lateral sclerosis (ortholog); arthrogryposis multiplex congenita (ortholog); FOUND IN cytoplasmic vesicle (ortholog); mitochondrion (ortholog); neuron projection (ortholog) 1 11468855 11599593 + 22301074 116892686 MODEL JAAIVD010000025;XM_032894543 XP_032750434 kinesin-like protein KIF1B protein-coding 625844855 Znf473 zinc finger protein 473 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); INVOLVED IN mRNA 3'-end processing by stem-loop binding and cleavage (ortholog); negative regulation of transcription initiation by RNA polymerase II (ortholog); ASSOCIATED WITH breast ductal carcinoma (ortholog); invasive ductal carcinoma (ortholog); FOUND IN Cajal body (ortholog); nucleoplasm (ortholog) 2 154783729 154802801 + 22301074;30032202 116892195 MODEL JAAIVD010000001;XM_032893726;XM_032893727 XP_032749617;XP_032749618 protein-coding 625844867 LOC116909001 60S ribosomal protein L31 9 16924948 16925390 - 22301074;30032202 116909001 MODEL JAAIVD010000002;XM_032912470 XP_032768361 protein-coding 625844872 LOC116893951 guanylate cyclase 2D 2 96716817 96751571 + 22301074;30032202 116893951 MODEL JAAIVD010000001;XM_032895668 XP_032751559 protein-coding 625844895 Postn periostin ENCODES a protein that exhibits heparin binding (ortholog); metal ion binding (ortholog); INVOLVED IN bone regeneration (ortholog); cell adhesion (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); aggressive periodontitis (ortholog); aspirin-induced respiratory disease (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog); neuromuscular junction (ortholog) 3 100025138 100056220 - 22301074 116896874 MODEL JAAIVD010000012;XM_032898416;XM_032898417;XM_032898418;XM_032898419 XP_032754307;XP_032754308;XP_032754309;XP_032754310 protein-coding 625844925 LOC116913861 uncharacterized LOC116913861 12 23966 25415 - 116913861 MODEL JAAIVD010000007 pseudo 625844926 Fkbp8 FKBP prolyl isomerase 8 ENCODES a protein that exhibits calmodulin binding (ortholog); disordered domain specific binding (ortholog); identical protein binding (ortholog); INVOLVED IN camera-type eye development (ortholog); cell fate specification (ortholog); dorsal/ventral neural tube patterning (ortholog); ASSOCIATED WITH clubfoot (ortholog); Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); spina bifida (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondrial envelope (ortholog); mitochondrion (ortholog) 13 12780672 12787661 + 22301074 116914262 MODEL JAAIVD010000008;XM_032918475;XM_032918476;XM_032918477;XM_032918478;XM_032918479;XM_032918480;XM_032918481 XP_032774366;XP_032774367;XP_032774368;XP_032774369;XP_032774370;XP_032774371;XP_032774372 peptidyl-prolyl cis-trans isomerase FKBP8 protein-coding 625844954 LOC116889254 ADP/ATP translocase 2-like X 73537157 73538045 - 116889254 MODEL JAAIVD010000014 pseudo 625844955 Prr14 proline rich 14 FOUND IN nucleoplasm (ortholog) 2 74424049 74429536 - 30032202 116891473 MODEL JAAIVD010000001;XM_032892572;XM_032892573;XM_032892574 XP_032748463;XP_032748464;XP_032748465 proline-rich protein 14 protein-coding 625844977 LOC116903664 regenerating islet-derived protein 3-alpha 6 67941212 67943985 - 30032202 116903664 MODEL JAAIVD010000024;XM_032906320 XP_032762211 protein-coding 625844987 Ubxn10 UBX domain protein 10 INVOLVED IN cilium assembly (ortholog); FOUND IN cilium (ortholog); intraciliary transport particle B (ortholog) 1 19483689 19489337 + 30032202 116893815 MODEL JAAIVD010000025;XM_032895533 XP_032751424 UBX domain-containing protein 10 protein-coding 625844993 Ms4a2 membrane spanning 4-domains A2 ENCODES a protein that exhibits IgE binding (ortholog); phosphoprotein binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); cytokine production (ortholog); immune response (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH aspirin-induced respiratory disease (ortholog); asthma (ortholog); atopic dermatitis (ortholog); FOUND IN endosome (ortholog); external side of plasma membrane (ortholog); Fc-epsilon receptor I complex (ortholog) 2 11238992 11245945 + 30032202 116893658 A0A8A1UCC0 MODEL JAAIVD010000001;XM_032895374;XM_032895375;XM_032895376 XP_032751265;XP_032751266;XP_032751267 high affinity immunoglobulin epsilon receptor subunit beta protein-coding 625845010 LOC116914847 zinc finger protein 844-like 13 20212408 20215033 - 116914847 MODEL JAAIVD010000008;XM_032919300 XP_032775191 protein-coding 625845017 Sumo3 small ubiquitin like modifier 3 ENCODES a protein that exhibits protein tag activity (ortholog); SUMO transferase activity (ortholog); INVOLVED IN positive regulation of ubiquitin-dependent protein catabolic process (ortholog); protein localization to nucleus (ortholog); protein sumoylation (ortholog); FOUND IN glutamatergic synapse (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 18 950517 961210 + 30032202 116887039 MODEL JAAIVD010000013;XM_032888532 XP_032744423 small ubiquitin-related modifier 3 protein-coding 625845025 Ddit3 DNA damage inducible transcript 3 ENCODES a protein that exhibits cAMP response element binding protein binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN anterior/posterior axis specification (ortholog); apoptotic process (ortholog); artery development (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); Acute-Phase Reaction (ortholog); FOUND IN CHOP-ATF3 complex (ortholog); CHOP-ATF4 complex (ortholog); CHOP-C/EBP complex (ortholog) 1 205725495 205730292 + 30032202 116909986 MODEL JAAIVD010000025;XM_032913772;XM_032913780 XP_032769663;XP_032769671 DNA damage-inducible transcript 3 protein protein-coding 625845036 Slc25a20 solute carrier family 25 member 20 ENCODES a protein that exhibits carnitine:O-acyl-L-carnitine antiporter activity (ortholog); O-acyl-L-carnitine transmembrane transporter activity (ortholog); INVOLVED IN carnitine shuttle (ortholog); carnitine transmembrane transport (ortholog); in utero embryonic development (ortholog); PARTICIPATES IN adrenoleukodystrophy pathway; carnitine-acylcarnitine translocase deficiency; fatty acid beta degradation pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); carnitine-acylcarnitine translocase deficiency (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) 8 99998410 100018298 + 30032202 116907607 MODEL JAAIVD010000027;XM_032910662 XP_032766553 mitochondrial carnitine/acylcarnitine carrier protein protein-coding 625845049 Amhr2 anti-Mullerian hormone receptor type 2 ENCODES a protein that exhibits anti-Mullerian hormone receptor activity (ortholog); hormone binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN anti-Mullerian hormone receptor signaling pathway (ortholog); female gonad development (ortholog); male gonad development (ortholog); ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); dysgerminoma (ortholog); Endometrial Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) 1 260626136 260635210 - 22301074;30032202 116883449 MODEL JAAIVD010000025;XM_032884599;XM_032884606;XM_032884614 XP_032740490;XP_032740497;XP_032740505 anti-Muellerian hormone type-2 receptor protein-coding 625845069 Wdr43 WD repeat domain 43 ENCODES a protein that exhibits RNA polymerase II complex binding (ortholog); transcription elongation factor activity (ortholog); INVOLVED IN positive regulation of rRNA processing (ortholog); positive regulation of transcription by RNA polymerase I (ortholog); regulation of stem cell population maintenance (ortholog); FOUND IN chromatin (ortholog); fibrillar center (ortholog); nucleolus (ortholog) 7 21558804 21597710 - 22301074;30032202 116905956 MODEL JAAIVD010000026;XM_032908956 XP_032764847 WD repeat-containing protein 43 protein-coding 625845091 LOC116885306 60S ribosomal protein L39-like 1 2836699 2837932 - 116885306 MODEL JAAIVD010000025 pseudo 625845092 LOC116903451 ubiquitin-conjugating enzyme E2 variant 1-like 6 42380499 42380943 - 116903451 MODEL JAAIVD010000024 pseudo 625845093 Rps8 ribosomal protein S8 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Parkinson's disease (ortholog); Weight Gain (ortholog); FOUND IN cytosol (ortholog); cytosolic ribosome (ortholog); cytosolic small ribosomal subunit (ortholog) 1 40777798 40780233 - 22301074;30032202 116898646 MODEL JAAIVD010000025;XM_032899876 XP_032755767 40S ribosomal protein S8 protein-coding 625845103 Tpd52l1 TPD52 like 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN G2/M transition of mitotic cell cycle (ortholog); positive regulation of apoptotic signaling pathway (ortholog); positive regulation of JNK cascade (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); perinuclear region of cytoplasm (ortholog) 2 205429322 205544025 - 30032202 116892931 MODEL JAAIVD010000001;XM_032894867;XM_032894868;XM_032894869 XP_032750758;XP_032750759;XP_032750760 tumor protein D53 protein-coding 625845119 Abhd2 abhydrolase domain containing 2, acylglycerol lipase ENCODES a protein that exhibits acetylesterase activity (ortholog); diacylglycerol lipase activity (ortholog); hormone binding (ortholog); INVOLVED IN acrosome reaction (ortholog); acylglycerol catabolic process (ortholog); negative regulation of cell migration (ortholog); FOUND IN acrosomal vesicle (ortholog); sperm flagellum (ortholog); sperm plasma membrane (ortholog) 2 120886942 120944564 - 30032202 116891946 MODEL JAAIVD010000001;XM_032893386 XP_032749277 monoacylglycerol lipase ABHD2 protein-coding 625845132 Ar androgen receptor ENCODES a protein that exhibits androgen binding (ortholog); ATPase binding (ortholog); beta-catenin binding (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); animal organ formation (ortholog); cellular response to estrogen stimulus (ortholog); PARTICIPATES IN altered androgen signaling pathway; androgen signaling pathway; forkhead class A signaling pathway; ASSOCIATED WITH 46,XY complete gonadal dysgenesis (ortholog); acute kidney failure (ortholog); alcohol dependence (ortholog); FOUND IN axon (ortholog); chromatin (ortholog); cytoplasm (ortholog) X 56136390 56301529 + 22301074;30032202 116888632 MODEL JAAIVD010000014;XM_032889926 XP_032745817 protein-coding 625845144 LOC116907796 uncharacterized LOC116907796 8 66441510 66449714 - 116907796 MODEL JAAIVD010000027;XR_004388847 ncrna 625845152 LOC116908394 small nucleolar RNA SNORA17 8 98490471 98490601 + 116908394 MODEL JAAIVD010000027;XR_004388938 snorna 625845155 LOC116913951 WW domain-binding protein 11-like 12 70154271 70156070 + 30032202 116913951 MODEL JAAIVD010000007;XM_032918216 XP_032774107 protein-coding 625845158 Sap30l SAP30 like ENCODES a protein that exhibits DNA binding (ortholog); histone binding (ortholog); non-sequence-specific DNA binding, bending (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN fibrillar center (ortholog); histone deacetylase complex (ortholog); nucleolus (ortholog) 9 40423441 40430791 - 22301074;30032202 116909142 MODEL JAAIVD010000002;XM_032912628 XP_032768519 histone deacetylase complex subunit SAP30L protein-coding 625845166 LOC116915165 U6 spliceosomal RNA 13 24310500 24310606 - 116915165 MODEL JAAIVD010000008;XR_004389827 snrna 625845169 LOC116888200 tyrosine-protein phosphatase non-receptor type 12-like X 126384592 126386097 - 116888200 MODEL JAAIVD010000014 pseudo 625845170 Ogfr opioid growth factor receptor 5 157690618 157696834 + 22301074;30032202 116902413 MODEL JAAIVD010000023;XM_032904943;XM_032904944 XP_032760834;XP_032760835 protein-coding 625845185 Arl6ip4 ARF like GTPase 6 interacting protein 4 ENCODES a protein that exhibits identical protein binding (ortholog) 16 29747078 29750061 - 116885517 MODEL JAAIVD010000004;XM_032886812 XP_032742703 ADP ribosylation factor like GTPase 6 interacting protein 4;ADP-ribosylation factor-like protein 6-interacting protein 4 protein-coding 625845194 LOC116885091 U1 spliceosomal RNA 15 53451130 53451281 - 116885091 MODEL JAAIVD010000010 pseudo 625845195 LOC116889076 chromobox protein homolog 1-like X 25041334 25043170 + 116889076 MODEL JAAIVD010000014 pseudo 625845196 Nprl2 NPR2 like, GATOR1 complex subunit ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); negative regulation of kinase activity (ortholog); negative regulation of TORC1 signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH epilepsy (ortholog); familial focal epilepsy with variable foci (ortholog); familial focal epilepsy with variable foci 1 (ortholog); FOUND IN GATOR1 complex (ortholog); lysosomal membrane (ortholog) 8 98858335 98861578 + 30032202 116907526 MODEL JAAIVD010000027;XM_032910539 XP_032766430 GATOR complex protein NPRL2 protein-coding 625845211 Ifrd1 interferon related developmental regulator 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN adipose tissue development (ortholog); fat cell differentiation (ortholog); glial cell proliferation (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Charcot-Marie-Tooth disease (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 7 53429003 53447099 - 30032202 116904988 MODEL JAAIVD010000026;XM_032907670 XP_032763561 interferon-related developmental regulator 1 protein-coding 625845227 Inpp1 inositol polyphosphate-1-phosphatase PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; ASSOCIATED WITH autistic disorder (ortholog); cleft palate (ortholog); retinal disease (ortholog) 4 122505277 122537153 + 22301074;30032202 116899368 MODEL JAAIVD010000003;XM_032901076;XM_032901077;XM_032901078;XM_032901079 XP_032756967;XP_032756968;XP_032756969;XP_032756970 inositol polyphosphate 1-phosphatase protein-coding 625845244 LOC116894921 small nucleolar RNA SNORD15 2 97754009 97754156 - 116894921 MODEL JAAIVD010000001;XR_004387120 snorna 625845247 LOC116895691 uncharacterized LOC116895691 3 204357929 204360209 + 116895691 MODEL JAAIVD010000012;XR_004387301 ncrna 625845252 LOC116898430 ER membrane protein complex subunit 2-like 4 91592916 91593459 - 116898430 MODEL JAAIVD010000003 pseudo 625845253 Inip INTS3 and NABP interacting protein INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); double-strand break repair via homologous recombination (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); site of double-strand break (ortholog) 1 91631542 91645441 + 22301074;30032202 116901471 MODEL JAAIVD010000025;XM_032903423;XM_032903432 XP_032759314;XP_032759323 SOSS complex subunit C protein-coding 625845267 LOC116906948 uncharacterized LOC116906948 8 11110738 11111445 + 116906948 MODEL JAAIVD010000027;XR_004388787 ncrna 625845271 LOC116911993 PRAME family member 8-like 11 48608834 48611499 + 22301074;30032202 116911993 MODEL JAAIVD010000006;XM_032915898 XP_032771789 protein-coding 625845276 LOC116904759 small nucleolar RNA SNORA17 6 113064774 113064904 + 116904759 MODEL JAAIVD010000024;XR_004388435 snorna 625845279 LOC116899724 zinc finger protein 431-like 4 182318898 182334129 + 22301074 116899724 MODEL JAAIVD010000003;XM_032901764 XP_032757655 protein-coding 625845285 LOC116906050 40S ribosomal protein SA-like 7 46845603 46887828 - 116906050 MODEL JAAIVD010000026 pseudo 625845286 LOC116908891 40S ribosomal protein S15-like 9 50931426 50931907 - 22301074;30032202 116908891 MODEL JAAIVD010000002;XM_032912339 XP_032768230 protein-coding 625845291 Klhl42 kelch like family member 42 ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein polyubiquitination (ortholog); regulation of microtubule-based process (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog) 6 4756344 4775114 + 22301074 116903101 MODEL JAAIVD010000024;XM_032905425 XP_032761316 kelch-like protein 42 protein-coding 625845298 Tlr6 toll like receptor 6 ENCODES a protein that exhibits diacyl lipopeptide binding (ortholog); identical protein binding (ortholog); lipopeptide binding (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); cellular response to amyloid-beta (ortholog); cellular response to diacyl bacterial lipopeptide (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); aspergillosis (ortholog); asthma (ortholog); FOUND IN Golgi apparatus (ortholog); membrane raft (ortholog); plasma membrane (ortholog) 11 21952804 21960343 - 22301074;30032202 116912545 MODEL JAAIVD010000006;XM_032916647 XP_032772538 toll-like receptor 6 protein-coding 625845304 Atp6v1g1 ATPase H+ transporting V1 subunit G1 ENCODES a protein that exhibits ATPase binding (ortholog); proton transmembrane transporter activity (ortholog); proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN cellular response to increased oxygen levels (ortholog); intracellular iron ion homeostasis (ortholog); synaptic vesicle lumen acidification (ortholog); FOUND IN cytosol (ortholog); extrinsic component of synaptic vesicle membrane (ortholog); lysosomal membrane (ortholog) 1 90032563 90038724 - 22301074;30032202 116901252 MODEL JAAIVD010000025;XM_032903009 XP_032758900 V-type proton ATPase subunit G 1 protein-coding 625845311 Clec12b C-type lectin domain family 12 member B ENCODES a protein that exhibits protein phosphatase binding (ortholog); signaling receptor inhibitor activity (ortholog); INVOLVED IN melanocyte proliferation (ortholog); natural killer cell inhibitory signaling pathway (ortholog); negative regulation of natural killer cell mediated cytotoxicity (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN external side of plasma membrane (ortholog); protein-containing complex (ortholog) 6 18210717 18221743 + 30032202 116904566 MODEL JAAIVD010000024;XM_032907364 XP_032763255 protein-coding 625845321 LOC116895948 pre-mRNA-splicing factor 38A-like 3 136094644 136095524 - 116895948 MODEL JAAIVD010000012 pseudo 625845322 LOC116914614 60S ribosomal protein L27a-like 1 190388848 190396036 + 116914614 MODEL JAAIVD010000025 pseudo 625845323 Lpin2 lipin 2 ENCODES a protein that exhibits phosphatidate phosphatase activity (ortholog); transcription coactivator activity (ortholog); INVOLVED IN lipid metabolic process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); triglyceride biosynthetic process (ortholog); ASSOCIATED WITH Chediak-Higashi syndrome (ortholog); genetic disease (ortholog); Majeed syndrome (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum membrane (ortholog) 4 180645604 180719326 + 30032202 116899715 MODEL JAAIVD010000003;XM_032901755;XM_032901756;XM_032901757;XM_032901758 XP_032757646;XP_032757647;XP_032757648;XP_032757649 phosphatidate phosphatase LPIN2 protein-coding 625845355 LOC116913746 60S ribosomal protein L27-like 12 61615843 61616277 + 22301074;30032202 116913746 MODEL JAAIVD010000007;XM_032918054 XP_032773945 protein-coding 625845360 Tent2 terminal nucleotidyltransferase 2 ENCODES a protein that exhibits poly(A) RNA polymerase activity (ortholog); INVOLVED IN dark adaptation (ortholog); hematopoietic progenitor cell differentiation (ortholog); hippocampus development (ortholog); FOUND IN glutamatergic synapse (ortholog); nucleus (ortholog); perforant pathway to dendrate granule cell synapse (ortholog) 3 203136083 203181797 + 30032202 116897294 MODEL JAAIVD010000012;XM_032899026;XM_032899027;XM_032899029 XP_032754917;XP_032754918;XP_032754920 poly(A) RNA polymerase GLD2 protein-coding 625845386 Trnae-cuc transfer RNA glutamic acid (anticodon CUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60800244 60800315 + 116897674 MODEL JAAIVD010000012 trna 625845387 Ewsr1 EWS RNA binding protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Ewing sarcoma (ortholog); Neoplastic Processes (ortholog); FOUND IN Cajal body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 11 74046921 74075128 - 22301074;30032202 116912837 MODEL JAAIVD010000006;XM_032917024;XM_032917025;XM_032917026;XM_032917027;XM_032917028 XP_032772915;XP_032772916;XP_032772917;XP_032772918;XP_032772919 RNA-binding protein EWS protein-coding 625845420 LOC116909182 uncharacterized LOC116909182 9 51392433 51400728 - 116909182 MODEL JAAIVD010000002;XR_004389054;XR_004389055 ncrna 625845427 LOC116894993 small nucleolar RNA SNORA32 2 222015338 222015460 - 116894993 MODEL JAAIVD010000001;XR_004387184 snorna 625845430 Pak5 p21 (RAC1) activated kinase 5 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN learning (ortholog); locomotory behavior (ortholog); memory (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nuclear membrane (ortholog) 5 115714765 115905362 - 22301074;30032202 116902017 MODEL JAAIVD010000023;XM_032904288 XP_032760179 serine/threonine-protein kinase PAK 5 protein-coding 625845444 LOC116914848 glyceraldehyde-3-phosphate dehydrogenase-like 13 33050928 33052043 + 116914848 MODEL JAAIVD010000008 pseudo 625845445 Atp6v1d ATPase H+ transporting V1 subunit D ENCODES a protein that exhibits guanyl nucleotide exchange factor activator activity (ortholog); proton transmembrane transporter activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cilium assembly (ortholog); positive regulation of TORC1 signaling (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN centrosome (ortholog); cilium (ortholog); extrinsic component of synaptic vesicle membrane (ortholog) 7 92957034 92972752 - 22301074;30032202 116905198 MODEL JAAIVD010000026;XM_032907994 XP_032763885 V-type proton ATPase subunit D protein-coding 625845458 LOC116908933 keratin-associated protein 2-1 9 54442576 54442968 - 22301074 116908933 MODEL JAAIVD010000002;XM_032912390 XP_032768281 protein-coding 625845461 Agk acylglycerol kinase ENCODES a protein that exhibits acylglycerol kinase activity (ortholog); ATP-dependent diacylglycerol kinase activity (ortholog); ceramide kinase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); lipid phosphorylation (ortholog); protein insertion into mitochondrial inner membrane (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 38 (ortholog); genetic disease (ortholog); FOUND IN membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog) 6 99409395 99483160 - 30032202 116903918 MODEL JAAIVD010000024;XM_032906690 XP_032762581 acylglycerol kinase, mitochondrial protein-coding 625845481 Ppp1r15a protein phosphatase 1 regulatory subunit 15A ENCODES a protein that exhibits eukaryotic initiation factor eIF2 binding (ortholog); molecular adaptor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to antibiotic (ortholog); cellular response to calcium ion starvation (ortholog); cellular response to carbohydrate stimulus (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Acute-On-Chronic Liver Failure (ortholog); Amaurosis Fugax (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) 2 153986308 153989424 + 30032202 116892144 MODEL JAAIVD010000001;XM_032893634 XP_032749525 protein-coding 625845488 LOC116899001 uncharacterized LOC116899001 4 53396279 53408506 + 116899001 MODEL JAAIVD010000003;XR_004387679;XR_004387680 ncrna 625845496 LOC116893677 olfactory receptor 5AN1-like 2 12322647 12323585 + 22301074;30032202 116893677 MODEL JAAIVD010000001;XM_032895394 XP_032751285 protein-coding 625845499 LOC116885956 40S ribosomal protein S29-like 16 21119805 21119978 - 116885956 MODEL JAAIVD010000004 pseudo 625845500 Tcea3 transcription elongation factor A3 INVOLVED IN gene expression (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; FOUND IN nucleus (ortholog) 1 21957730 21990441 - 22301074;30032202 116894401 MODEL JAAIVD010000025;XM_032896111 XP_032752002 transcription elongation factor A protein 3 protein-coding 625845515 LOC116894911 U7 small nuclear RNA 2 111075072 111075131 + 116894911 MODEL JAAIVD010000001;XR_004387113 snrna 625845518 Kcnt2 potassium sodium-activated channel subfamily T member 2 ENCODES a protein that exhibits chloride-activated potassium channel activity (ortholog); intracellular sodium-activated potassium channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN potassium ion export across plasma membrane (ortholog); potassium ion transport (ortholog); ASSOCIATED WITH Congenital Hyperinsulinism (ortholog); developmental and epileptic encephalopathy 57 (ortholog); epilepsy (ortholog); FOUND IN plasma membrane (ortholog) 10 20506211 20773224 + 22301074;30032202 116911591 MODEL JAAIVD010000005;XM_032915567 XP_032771458 potassium channel subfamily T member 2 protein-coding 625845544 LOC116909567 olfactory receptor 2W3-like 9 39378644 39379627 - 22301074 116909567 MODEL JAAIVD010000002;XM_032913185 XP_032769076 protein-coding 625845547 Dffa DNA fragmentation factor subunit alpha ENCODES a protein that exhibits deoxyribonuclease inhibitor activity (ortholog); INVOLVED IN negative regulation of apoptotic DNA fragmentation (ortholog); negative regulation of execution phase of apoptosis (ortholog); positive regulation of apoptotic process (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); nucleus (ortholog) 1 11657463 11670523 - 22301074;30032202 116892693 MODEL JAAIVD010000025;XM_032894553 XP_032750444 protein-coding 625845557 LOC116893273 alcohol sulfotransferase A-like 2 143840322 143969769 + 22301074;30032202 116893273 MODEL JAAIVD010000001;XM_032895120 XP_032751011 protein-coding 625845570 LOC116902793 gamma-aminobutyric acid receptor-associated protein-like 2 6 77768143 77768626 - 30032202 116902793 MODEL JAAIVD010000024;XM_032905130 XP_032761021 protein-coding 625845575 Mpc1l mitochondrial pyruvate carrier 1 like INVOLVED IN pyruvate import into mitochondria (ortholog); FOUND IN mitochondrial inner membrane (ortholog) X 8733158 8734061 - 22301074 116888989 MODEL JAAIVD010000014;XM_032890207 XP_032746098 mitochondrial pyruvate carrier 1-like protein protein-coding 625845580 LOC116910451 olfactory receptor 6C6-like 1 161658870 161659823 - 116910451 MODEL JAAIVD010000025 pseudo 625845581 Gsap gamma-secretase activating protein ENCODES a protein that exhibits amyloid-beta binding (ortholog); INVOLVED IN positive regulation of amyloid-beta formation (ortholog); regulation of proteolysis (ortholog); FOUND IN trans-Golgi network (ortholog) 6 150469661 150563594 + 30032202 116904170 MODEL JAAIVD010000024;XM_032907071 XP_032762962 gamma-secretase-activating protein protein-coding 625845618 LOC116912749 ATP-binding cassette sub-family G member 3-like 11 14693856 14728837 + 116912749 MODEL JAAIVD010000006;XR_004389476 pseudo 625845636 LOC116895910 TD and POZ domain-containing protein 2-like 3 120717018 120717699 - 116895910 MODEL JAAIVD010000012 pseudo 625845637 LOC116897583 small nucleolar RNA SNORA17 3 98327961 98328089 - 116897583 MODEL JAAIVD010000012;XR_004387589 snorna 625845640 Acan aggrecan ENCODES a protein that exhibits calcium ion binding (ortholog); extracellular matrix structural constituent (ortholog); INVOLVED IN cartilage condensation (ortholog); cellular response to growth factor stimulus (ortholog); chondroblast differentiation (ortholog); ASSOCIATED WITH achondroplasia (ortholog); Brain Injuries (ortholog); congestive heart failure (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) 2 121135373 121168301 - 22301074 116891949 MODEL JAAIVD010000001;XM_032893390 XP_032749281 aggrecan core protein protein-coding 625845660 LOC116907108 phosphoglycerate kinase 1-like 8 1309658 1310900 - 22301074;30032202 116907108 MODEL JAAIVD010000027;XM_032910076 XP_032765967 protein-coding 625845663 LOC116890344 U6 spliceosomal RNA 1 190845323 190845426 + 116890344 MODEL JAAIVD010000025;XR_004386566 snrna 625845666 Ch25h cholesterol 25-hydroxylase ENCODES a protein that exhibits cholesterol 25-hydroxylase activity (ortholog); steroid hydroxylase activity (ortholog); INVOLVED IN B cell chemotaxis (ortholog); cholesterol metabolic process (ortholog); negative regulation of cholesterol metabolic process (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway 2 34108766 34110300 - 22301074;30032202 116893781 MODEL JAAIVD010000001;XM_032895484 XP_032751375 protein-coding 625845671 Oxsm 3-oxoacyl-ACP synthase, mitochondrial ENCODES a protein that exhibits 3-oxoacyl-[acyl-carrier-protein] synthase activity (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); medium-chain fatty acid biosynthetic process (ortholog); short-chain fatty acid biosynthetic process (ortholog); FOUND IN mitochondrion (ortholog) 12 85613367 85616693 - 22301074;30032202 116913680 MODEL JAAIVD010000007;XM_032917968;XM_032917969 XP_032773859;XP_032773860 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial protein-coding 625845681 LOC116897286 small nuclear ribonucleoprotein-associated protein N-like 3 202155924 202156807 - 116897286 MODEL JAAIVD010000012 pseudo 625845682 Fasn fatty acid synthase ENCODES a protein that exhibits (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity (ortholog); 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity (ortholog); [acyl-carrier-protein] S-acetyltransferase activity (ortholog); INVOLVED IN acetyl-CoA metabolic process (ortholog); cell development (ortholog); cellular response to interleukin-4 (ortholog); PARTICIPATES IN fatty acid biosynthetic pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Animal Disease Models (ortholog); autism spectrum disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); fatty acid synthase complex (ortholog) 9 63208861 63226963 + 22301074;30032202 116909856 MODEL JAAIVD010000002;XM_032913583 XP_032769474 protein-coding 625845729 Nrk Nik related kinase ENCODES a protein that exhibits protein kinase activity (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); parturition (ortholog); positive regulation of JNK cascade (ortholog); PARTICIPATES IN tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH autistic disorder (ortholog) X 91416192 91509624 + 22301074 116889163 MODEL JAAIVD010000014;XM_032890331 XP_032746222 nik-related protein kinase protein-coding 625845760 Unc13b unc-13 homolog B ENCODES a protein that exhibits calmodulin binding (ortholog); GTP-dependent protein binding (ortholog); INVOLVED IN acrosomal vesicle exocytosis (ortholog); cellular response to glucose stimulus (ortholog); chemical synaptic transmission (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN calyx of Held (ortholog); cytosol (ortholog); early phagosome (ortholog) 1 3237871 3320818 - 22301074;30032202 116891132 MODEL JAAIVD010000025;XM_032891862;XM_032891871;XM_032891880;XM_032891890;XM_032891899;XM_032891909;XM_032891920 XP_032747753;XP_032747762;XP_032747771;XP_032747781;XP_032747790;XP_032747800;XP_032747811 protein unc-13 homolog B protein-coding 625845814 LOC116886051 small nuclear ribonucleoprotein G-like 17 20396187 20396485 - 116886051 MODEL JAAIVD010000011 pseudo 625845815 LOC116914941 cofilin-1-like 13 10556189 10556860 - 116914941 MODEL JAAIVD010000008 pseudo 625845816 LOC116889469 small Cajal body-specific RNA 13 X 100888297 100888536 + 116889469 MODEL JAAIVD010000014;XR_004386421 ncrna 625845819 Fbxl3 F-box and leucine rich repeat protein 3 ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN entrainment of circadian clock by photoperiod (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein destabilization (ortholog); ASSOCIATED WITH INTELLECTUAL DEVELOPMENTAL DISORDER WITH SHORT STATURE, FACIAL ANOMALIES, AND SPEECH DEFECTS (ortholog); FOUND IN cytosol (ortholog); nuclear body (ortholog); nucleus (ortholog) 12 21619467 21639924 + 22301074;30032202 116913145 MODEL JAAIVD010000007;XM_032917350;XM_032917351;XM_032917352 XP_032773241;XP_032773242;XP_032773243 F-box/LRR-repeat protein 3 protein-coding 625845834 LOC116885006 60S ribosomal protein L31-like 15 74127198 74127611 + 22301074;30032202 116885006 MODEL JAAIVD010000010;XM_032886244 XP_032742135 protein-coding 625845838 LOC116896081 rRNA 2'-O-methyltransferase fibrillarin-like 3 214215190 214217187 + 116896081 MODEL JAAIVD010000012 pseudo 625845839 LOC116893104 nucleolin-like 2 64566972 64619466 - 116893104 MODEL JAAIVD010000001 pseudo 625845840 LOC116893525 nesprin-1-like 2 197566080 197580353 + 116893525 MODEL JAAIVD010000001;XM_032895250 XP_032751141 protein-coding 625845849 Fam53c family with sequence similarity 53 member C ASSOCIATED WITH autistic disorder (ortholog) 15 9585745 9597575 - 30032202 116884536 MODEL JAAIVD010000010;XM_032885672 XP_032741563 protein FAM53C protein-coding 625845858 LOC116884650 uncharacterized LOC116884650 15 71854430 71862211 + 116884650 MODEL JAAIVD010000010;XR_004385887 ncrna 625845863 Folr2 folate receptor beta ENCODES a protein that exhibits folic acid binding (ortholog); folic acid receptor activity (ortholog); INVOLVED IN folic acid transport (ortholog); monocyte chemotaxis (ortholog); positive regulation of cell population proliferation (ortholog); PARTICIPATES IN folate cycle metabolic pathway; folate metabolic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Experimental Liver Cirrhosis (ortholog); metabolic dysfunction-associated steatotic liver disease (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog) 2 100134189 100139896 - 30032202 116891769 MODEL JAAIVD010000001;XM_032893093;XM_032893094 XP_032748984;XP_032748985 protein-coding 625845876 Ythdf2 YTH N6-methyladenosine RNA binding protein F2 ENCODES a protein that exhibits C5-methylcytidine-containing RNA reader activity (ortholog); N6-methyladenosine-containing RNA reader activity (ortholog); INVOLVED IN gamete generation (ortholog); hematopoietic stem cell proliferation (ortholog); mRNA catabolic process (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); cytoplasmic stress granule (ortholog) 1 26039050 26064542 + 30032202 116895617 MODEL JAAIVD010000025;XM_032896831 XP_032752722 YTH N6-methyladenosine RNA binding protein 2;YTH domain-containing family protein 2 protein-coding 625845885 Kcnj9 potassium inwardly rectifying channel subfamily J member 9 ENCODES a protein that exhibits G-protein activated inward rectifier potassium channel activity (ortholog); PDZ domain binding (ortholog); INVOLVED IN regulation of presynaptic membrane potential (ortholog); FOUND IN inward rectifier potassium channel complex (ortholog); parallel fiber to Purkinje cell synapse (ortholog); presynaptic membrane (ortholog) 10 51433065 51439671 - 22301074;30032202 116911009 MODEL JAAIVD010000005;XM_032914738 XP_032770629 G protein-activated inward rectifier potassium channel 3 protein-coding 625845893 Arln allregulin INVOLVED IN negative regulation of ATPase-coupled calcium transmembrane transporter activity (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 3 36897832 36899605 - 116896294 MODEL JAAIVD010000012;XM_032897377 XP_032753268 C3H4orf3 chromosome 3 C4orf3 homolog;uncharacterized protein C4orf3 homolog protein-coding 625845899 LOC116899738 U4 spliceosomal RNA 4 60681499 60681639 + 116899738 MODEL JAAIVD010000003;XR_004387754 snrna 625845902 Tcf20 transcription factor 20 ENCODES a protein that exhibits minor groove of adenine-thymine-rich DNA binding (ortholog); transcription cis-regulatory region binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Developmental Delay with Variable Intellectual Impairment and Behavioral Abnormalities (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 252217388 252317309 - 30032202 116914343 MODEL JAAIVD010000025;XM_032918562;XM_032918567;XM_032918570 XP_032774453;XP_032774458;XP_032774461 protein-coding 625845917 C2H10orf88 chromosome 2 C10orf88 homolog ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) 2 70476729 70494613 + 116891406 MODEL JAAIVD010000001;XM_032892433;XM_032892434 XP_032748324;XP_032748325 ATPase PAAT protein-coding 625845929 Yjefn3 YjeF N-terminal domain containing 3 ASSOCIATED WITH urinary bladder cancer (ortholog) 13 12155846 12162004 - 30032202 116914541 MODEL JAAIVD010000008;XM_032918872 XP_032774763 yjeF N-terminal domain-containing protein 3 protein-coding 625845939 LOC116910910 guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5-like 10 50464105 50464369 + 116910910 MODEL JAAIVD010000005 pseudo 625845940 Iqcf3 IQ motif containing F3 8 97846500 97857593 - 30032202 116907950 MODEL JAAIVD010000027;XM_032911171;XM_032911172 XP_032767062;XP_032767063 IQ domain-containing protein F3 protein-coding 625845956 Hnrnpul2 heterogeneous nuclear ribonucleoprotein U like 2 ASSOCIATED WITH autistic disorder (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); synapse (ortholog) 2 9115657 9127571 - 22301074;30032202 116890923 MODEL JAAIVD010000001;XM_032891558;XM_032891559 XP_032747449;XP_032747450 heterogeneous nuclear ribonucleoprotein U-like protein 2 protein-coding 625845978 Mfsd2b MFSD2 lysolipid transporter B, sphingolipid INVOLVED IN lipid transport (ortholog); positive regulation of platelet aggregation (ortholog); sphingosine-1-phosphate receptor signaling pathway (ortholog); FOUND IN plasma membrane (ortholog) 7 25503127 25514296 - 30032202 116905671 MODEL JAAIVD010000026;XM_032908654 XP_032764545 major facilitator superfamily domain containing 2B;major facilitator superfamily domain-containing protein 2B protein-coding 625845994 LOC116902553 small nucleolar RNA SNORA48 5 17011274 17011406 + 116902553 MODEL JAAIVD010000023 pseudo 625845995 Rab40b RAB40B, member RAS oncogene family ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN cellular detoxification (ortholog); negative regulation of actin filament bundle assembly (ortholog); positive regulation of cell migration (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog); lamellipodium (ortholog); lamellipodium membrane (ortholog) 9 62641646 62669271 + 22301074;30032202 116909671 MODEL JAAIVD010000002;XM_032913326 XP_032769217 ras-related protein Rab-40B protein-coding 625846005 Igfbp3 insulin like growth factor binding protein 3 ENCODES a protein that exhibits fibronectin binding (ortholog); insulin-like growth factor binding (ortholog); insulin-like growth factor I binding (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); cellular response to Thyroglobulin triiodothyronine (ortholog); female pregnancy (ortholog); PARTICIPATES IN insulin-like growth factor signaling pathway; ASSOCIATED WITH acoustic neuroma (ortholog); Acute-Phase Reaction (ortholog); Alzheimer's disease (ortholog); FOUND IN extracellular region (ortholog); heterochromatin (ortholog); insulin-like growth factor binary complex (ortholog) 11 76113887 76121525 - 22301074;30032202 116912685 MODEL JAAIVD010000006;XM_032916820 XP_032772711 insulin-like growth factor-binding protein 3 protein-coding 625846014 LOC116890096 catenin beta-1-like 1 231220648 231222902 - 116890096 MODEL JAAIVD010000025 pseudo 625846015 LOC116893481 migration and invasion enhancer 1-like 1 17066494 17066906 - 116893481 MODEL JAAIVD010000025 pseudo 625846016 Mb21d2 Mab-21 domain containing 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog) 4 13758808 13858068 - 116898739 MODEL JAAIVD010000003;XM_032900051 XP_032755942 protein MB21D2 protein-coding 625846022 LOC116912687 ruvB-like 2 11 17699961 17701372 - 116912687 MODEL JAAIVD010000006 pseudo 625846023 Dpep2nb DPEP2 neighbor 17 25742161 25752155 - 116886658 MODEL JAAIVD010000011;XM_032888152 XP_032744043 DPEP2 neighbor protein protein-coding 625846027 Slx1a structure-specific endonuclease subunit SLX1A ENCODES a protein that exhibits 5'-flap endonuclease activity (ortholog); crossover junction DNA endonuclease activity (ortholog); INVOLVED IN DNA double-strand break processing involved in repair via single-strand annealing (ortholog); DNA repair (ortholog); double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH Fanconi-like syndrome (ortholog); FOUND IN nuclear chromosome (ortholog); nucleoplasm (ortholog); Slx1-Slx4 complex (ortholog) 2 75208625 75213515 + 22301074;30032202 116891513 MODEL JAAIVD010000001;XM_032892650 XP_032748541 SLX1 homolog A, structure-specific endonuclease subunit;structure-specific endonuclease subunit SLX1 protein-coding 625846037 Socs2 suppressor of cytokine signaling 2 ENCODES a protein that exhibits growth hormone receptor binding (ortholog); insulin-like growth factor receptor binding (ortholog); phosphorylation-dependent protein binding (ortholog); INVOLVED IN cellular response to hormone stimulus (ortholog); growth hormone receptor signaling pathway (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN interleukin-2 signaling pathway; ASSOCIATED WITH allergic contact dermatitis (ortholog); Breast Neoplasms (ortholog); ductal carcinoma in situ (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog) 1 174575601 174611915 - 22301074;30032202 116908425 MODEL JAAIVD010000025;XM_032911620;XM_032911621;XM_032911622;XM_032911623 XP_032767511;XP_032767512;XP_032767513;XP_032767514 protein-coding 625846056 Uroc1 urocanate hydratase 1 ENCODES a protein that exhibits urocanate hydratase activity (ortholog); INVOLVED IN L-histidine catabolic process (ortholog); PARTICIPATES IN histidine metabolic pathway; histidinemia pathway; ASSOCIATED WITH Ataxia (ortholog); hepatocellular carcinoma (ortholog); intellectual disability (ortholog); FOUND IN cytosol (ortholog) 6 56547860 56577810 - 22301074;30032202 116902724 MODEL JAAIVD010000024;XM_032905075 XP_032760966 urocanate hydratase protein-coding 625846078 LOC116914499 pinin-like 13 34281810 34284151 - 116914499 MODEL JAAIVD010000008;XR_004389754 pseudo 625846081 LOC116894988 U1 spliceosomal RNA 2 122427446 122427608 + 116894988 MODEL JAAIVD010000001;XR_004387179 snrna 625846084 LOC116913769 olfactory receptor 10G3-like 12 71535623 71536564 + 22301074 116913769 MODEL JAAIVD010000007;XM_032918075 XP_032773966 protein-coding 625846087 LOC116885891 cytochrome P450 3A9-like 16 15050689 15077872 + 22301074;30032202 116885891 MODEL JAAIVD010000004;XM_032887213 XP_032743104 protein-coding 625846104 LOC116888885 40S ribosomal protein SA-like X 63477132 63478005 + 116888885 MODEL JAAIVD010000014 pseudo 625846105 LOC116900459 olfactory receptor 4A15 5 71191210 71192157 - 22301074 116900459 MODEL JAAIVD010000023;XM_032902200 XP_032758091 protein-coding 625846109 LOC116884919 bromodomain-containing protein 8-like 15 9758282 9779504 + 22301074;30032202 116884919 MODEL JAAIVD010000010;XM_032886141 XP_032742032 protein-coding 625846118 Gpr27 G protein-coupled receptor 27 INVOLVED IN positive regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); positive regulation of phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH malignant mesothelioma (ortholog); FOUND IN plasma membrane (ortholog) 6 47377993 47380505 - 22301074;30032202 116903466 MODEL JAAIVD010000024;XM_032906018 XP_032761909 probable G-protein coupled receptor 27 protein-coding 625846123 Slc22a8 solute carrier family 22 member 8 ENCODES a protein that exhibits antiporter activity (ortholog); prostaglandin transmembrane transporter activity (ortholog); protein kinase C binding (ortholog); INVOLVED IN glutathione transport (ortholog); prostaglandin transport (ortholog); quaternary ammonium group transport (ortholog); PARTICIPATES IN ibuprofen pharmacodynamics pathway; ibuprofen pharmacokinetics pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Experimental Liver Cirrhosis (ortholog); Human Influenza (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) 2 9318762 9339310 - 22301074 116890940 MODEL JAAIVD010000001;XM_032891582 XP_032747473 protein-coding 625846139 LOC116908866 uncharacterized LOC116908866 9 31946234 31956149 + 116908866 MODEL JAAIVD010000002;XR_004389035 ncrna 625846144 Arsi arylsulfatase family member I ASSOCIATED WITH autism spectrum disorder (ortholog); hereditary spastic paraplegia (ortholog); paraplegia (ortholog) 15 71030077 71036861 - 116884590 MODEL JAAIVD010000010;XM_032885733 XP_032741624 arylsulfatase I protein-coding 625846149 Arl14ep ARF like GTPase 14 effector protein ASSOCIATED WITH Developmental Disabilities (ortholog); intellectual disability (ortholog); FOUND IN cytosol (ortholog) 5 84865484 84875993 - 30032202 116901720 MODEL JAAIVD010000023;XM_032903854 XP_032759745 ADP ribosylation factor like GTPase 14 effector protein;ARL14 effector protein protein-coding 625846158 LOC116891014 40S ribosomal protein S15-like 2 18650030 18650440 + 116891014 MODEL JAAIVD010000001 pseudo 625846159 Misp mitotic spindle positioning ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN astral microtubule organization (ortholog); cell migration (ortholog); cortical actin cytoskeleton organization (ortholog); FOUND IN actin filament (ortholog); cortical actin cytoskeleton (ortholog); focal adhesion (ortholog) 1 155044198 155054456 - 116905609 MODEL JAAIVD010000025;XM_032908602;XM_032908604 XP_032764493;XP_032764495 mitotic interactor and substrate of PLK1 protein-coding 625846170 LOC116898321 histidine triad nucleotide-binding protein 1-like 1 97744561 97744987 - 30032202 116898321 MODEL JAAIVD010000025;XM_032899673 XP_032755564 protein-coding 625846174 Amz1 archaelysin family metallopeptidase 1 16 12456264 12482703 - 22301074 116885618 MODEL JAAIVD010000004;XM_032886918 XP_032742809 archaemetzincin-1 protein-coding 625846186 Smagp small cell adhesion glycoprotein FOUND IN cell junction (ortholog); plasma membrane (ortholog) 1 262474098 262490939 + 116883938 MODEL JAAIVD010000025;XM_032885188;XM_032885196 XP_032741079;XP_032741087 protein-coding 625846197 Ppp1r2 protein phosphatase 1 regulatory inhibitor subunit 2 ENCODES a protein that exhibits molecular function inhibitor activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN negative regulation of protein binding (ortholog); FOUND IN dendritic spine (ortholog); growth cone (ortholog) 4 16156390 16180166 - 22301074;30032202 116898754 MODEL JAAIVD010000003;XM_032900072 XP_032755963 protein phosphatase inhibitor 2 protein-coding 625846207 Ldb2 LIM domain binding 2 ENCODES a protein that exhibits enzyme binding (ortholog); LIM domain binding (ortholog); INVOLVED IN epithelial structure maintenance (ortholog); hair follicle development (ortholog); positive regulation of cellular component biogenesis (ortholog); FOUND IN cell leading edge (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 11 61003534 61328529 + 30032202 116912525 MODEL JAAIVD010000006;XM_032916616;XM_032916618;XM_032916619;XM_032916620;XM_032916621;XM_032916622;XM_032916623;XM_032916624;XM_032916625;XM_032916626 XP_032772507;XP_032772509;XP_032772510;XP_032772511;XP_032772512;XP_032772513;XP_032772514;XP_032772515;XP_032772516;XP_032772517 LIM domain-binding protein 2 protein-coding 625846242 LOC116895585 fatty acid-binding protein 9 3 144245366 144259849 - 30032202 116895585 MODEL JAAIVD010000012;XM_032896810;XM_032896811;XM_032896812 XP_032752701;XP_032752702;XP_032752703 fatty acid-binding protein, adipocyte protein-coding 625846259 LOC116898998 mitogen-activated protein kinase kinase kinase kinase 4-like 1 30836500 30839056 - 116898998 MODEL JAAIVD010000025 pseudo 625846260 LOC116890556 small nucleolar RNA SNORA17 1 270877985 270878110 + 116890556 MODEL JAAIVD010000025;XR_004386730 snorna 625846263 Thap6 THAP domain containing 6 FOUND IN microtubule cytoskeleton (ortholog) 11 4790928 4801336 + 116912134 MODEL JAAIVD010000006;XM_032916045;XM_032916046;XM_032916047 XP_032771936;XP_032771937;XP_032771938 THAP domain-containing protein 6 protein-coding 625846280 Kdm4a lysine demethylase 4A ENCODES a protein that exhibits histone demethylase activity (ortholog); histone H3K36 demethylase activity (ortholog); histone H3K9 demethylase activity (ortholog); INVOLVED IN apoptotic chromosome condensation (ortholog); cardiac muscle hypertrophy in response to stress (ortholog); negative regulation of astrocyte differentiation (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; histone modification pathway; ASSOCIATED WITH alopecia areata (ortholog); breast cancer (ortholog); Cardiomegaly (ortholog); FOUND IN fibrillar center (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 38841799 38884163 + 30032202 116897934 MODEL JAAIVD010000025;XM_032899337 XP_032755228 lysine-specific demethylase 4A protein-coding 625846305 LOC116888166 cancer/testis antigen 55-like X 116892785 116904086 + 116888166 MODEL JAAIVD010000014;XM_032889489 XP_032745380 protein-coding 625846312 LOC116894581 vomeronasal type-1 receptor 2-like 2 180372680 180373600 - 22301074;30032202 116894581 MODEL JAAIVD010000001;XM_032896302 XP_032752193 protein-coding 625846315 LOC116906331 U6 spliceosomal RNA 7 79259920 79260024 + 116906331 MODEL JAAIVD010000026;XR_004388617 snrna 625846318 Hsd17b8 hydroxysteroid 17-beta dehydrogenase 8 ENCODES a protein that exhibits (3R)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity (ortholog); estradiol 17-beta-dehydrogenase [NAD(P)+] activity (ortholog); NADH binding (ortholog); INVOLVED IN androgen metabolic process (ortholog); estrogen biosynthetic process (ortholog); estrogen metabolic process (ortholog); FOUND IN membrane (ortholog); mitochondrial envelope (ortholog); mitochondrial matrix (ortholog) 18 8298301 8300328 + 30032202 116887421 MODEL JAAIVD010000013;XM_032889032;XM_032889033;XM_032889035;XM_032889036;XM_032889037;XR_004386213 XP_032744923;XP_032744924;XP_032744926;XP_032744927;XP_032744928 estradiol 17-beta-dehydrogenase 8 protein-coding 625846342 LOC116903860 SCO-spondin-like 6 92467598 92520601 - 22301074;30032202 116903860 MODEL JAAIVD010000024;XM_032906603 XP_032762494 protein-coding 625846448 LOC116885972 5S ribosomal RNA 16 33744449 33744557 - 116885972 MODEL JAAIVD010000004 pseudo 625846449 LOC116913540 translation initiation factor IF-2-like 12 83844957 83882731 + 116913540 MODEL JAAIVD010000007;XM_032917740 XP_032773631 protein-coding 625846454 LOC116884897 serine protease inhibitor Kazal-type 1-like 15 1273221 1283130 - 22301074 116884897 MODEL JAAIVD010000010;XM_032886126 XP_032742017 protein-coding 625846461 Hapstr2 HUWE1 associated protein modifying stress responses 2 ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN protein stabilization (ortholog); FOUND IN nucleus (ortholog) X 119623377 119625447 + 116889236 MODEL JAAIVD010000014;XM_032890386 XP_032746277 UPF0472 protein C16orf72 protein-coding 625846466 Ssbp2 single stranded DNA binding protein 2 ASSOCIATED WITH bipolar disorder (ortholog); prostate cancer (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog) 3 204527838 204781784 - 22301074;30032202 116897304 MODEL JAAIVD010000012;XM_032899048;XM_032899049;XM_032899050;XM_032899051;XM_032899052;XM_032899053;XM_032899054 XP_032754939;XP_032754940;XP_032754941;XP_032754942;XP_032754943;XP_032754944;XP_032754945 single-stranded DNA-binding protein 2 protein-coding 625846501 Lmtk3 lemur tyrosine kinase 3 2 153712513 153731912 - 22301074;30032202 116893322 MODEL JAAIVD010000001;XM_032895140 XP_032751031 serine/threonine-protein kinase LMTK3 protein-coding 625846521 LOC116914931 ubiquitin-conjugating enzyme E2 R1-like 13 6629390 6630020 - 116914931 MODEL JAAIVD010000008 pseudo 625846522 LOC116883732 serine/threonine-protein phosphatase 2A catalytic subunit 14 46608626 46609561 + 116883732 MODEL JAAIVD010000009 pseudo 625846523 LOC116904373 creatine kinase U-type, mitochondrial-like 6 87889336 87897334 + 116904373 MODEL JAAIVD010000024 pseudo 625846524 Fgl2 fibrinogen like 2 ENCODES a protein that exhibits peptidase activator activity (ortholog); INVOLVED IN negative regulation of defense response to virus (ortholog); negative regulation of dendritic cell antigen processing and presentation (ortholog); negative regulation of macrophage antigen processing and presentation (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); autoimmune glomerulonephritis (ortholog); COVID-19 (ortholog); FOUND IN cell surface (ortholog) 6 150654550 150660308 + 30032202 116904172 MODEL JAAIVD010000024;XM_032907073 XP_032762964 fibroleukin protein-coding 625846530 Pccb propionyl-CoA carboxylase subunit beta ENCODES a protein that exhibits propionyl-CoA carboxylase activity (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 8 92347217 92397477 - 30032202 116907249 MODEL JAAIVD010000027;XM_032910206 XP_032766097 propionyl-CoA carboxylase beta chain, mitochondrial protein-coding 625846549 LOC116889097 nucleophosmin-like X 113342838 113343690 - 116889097 MODEL JAAIVD010000014 pseudo 625846550 LOC116895890 eukaryotic initiation factor 4A-I-like 3 114392887 114393660 + 116895890 MODEL JAAIVD010000012 pseudo 625846551 Ccer2 coiled-coil glutamate rich protein 2 2 167247505 167250366 - 116892383 MODEL JAAIVD010000001;XM_032894048 XP_032749939 coiled-coil domain-containing glutamate-rich protein 2 protein-coding 625846559 Znf513 zinc finger protein 513 ENCODES a protein that exhibits DNA binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN retina development in camera-type eye (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); optic atrophy (ortholog); retinitis pigmentosa (ortholog); FOUND IN nucleus (ortholog) 7 22883899 22887202 + 30032202 116905980 MODEL JAAIVD010000026;XM_032908991 XP_032764882 protein-coding 625846566 C7 complement C7 ENCODES a protein that exhibits wide pore channel activity (ortholog); INVOLVED IN complement activation (ortholog); complement activation, GZMK pathway (ortholog); intracellular sodium ion homeostasis (ortholog); ASSOCIATED WITH complement component 7 deficiency (ortholog); Experimental Liver Cirrhosis (ortholog); Experimental Seizures (ortholog); FOUND IN membrane attack complex (ortholog); other organism cell membrane (ortholog) 3 175254868 175329097 + 22301074 116896010 MODEL JAAIVD010000012;XM_032897030 XP_032752921 complement component C7 protein-coding 625846587 Commd8 COMM domain containing 8 FOUND IN cytosol (ortholog); nucleoplasm (ortholog); protein-containing complex (ortholog) 11 28979103 28989576 - 116912547 MODEL JAAIVD010000006;XM_032916648 XP_032772539 COMM domain-containing protein 8 protein-coding 625846596 LOC116887745 small nucleolar RNA SNORD98 18 28576891 28576955 - 116887745 MODEL JAAIVD010000013;XR_004386251 snorna 625846599 Ctrl chymotrypsin like ENCODES a protein that exhibits peptidase activity (ortholog); serine-type peptidase activity (ortholog); INVOLVED IN proteolysis (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); FOUND IN extracellular region (ortholog) 17 25672342 25675679 - 22301074;30032202 116886398 MODEL JAAIVD010000011;XM_032887867 XP_032743758 chymotrypsin-like protease CTRL-1 protein-coding 625846610 LOC116895962 prefoldin subunit 3-like 3 144788144 144788792 - 116895962 MODEL JAAIVD010000012 pseudo 625846611 Chmp5 charged multivesicular body protein 5 INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); cellular response to lipopolysaccharide (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); cytosol (ortholog) 1 117217009 117234144 - 30032202 116902527 MODEL JAAIVD010000025;XM_032905029 XP_032760920 protein-coding 625846623 Hexa hexosaminidase subunit alpha ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); beta-N-acetylhexosaminidase activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN adult walking behavior (ortholog); cell morphogenesis involved in neuron differentiation (ortholog); dermatan sulfate proteoglycan catabolic process (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; sialic acid storage disease pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); GM2 gangliosidosis (ortholog); FOUND IN azurophil granule (ortholog); extracellular region (ortholog); lysosome (ortholog) 8 53376633 53402727 + 22301074;30032202 116906709 MODEL JAAIVD010000027;XM_032909515 XP_032765406 beta-hexosaminidase subunit alpha protein-coding 625846641 Trnar-ccu transfer RNA arginine (anticodon CCU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). X 67678153 67678225 - 116889588 MODEL JAAIVD010000014 trna 625846642 LOC116892028 small nuclear ribonucleoprotein-associated protein N 2 139967084 139972658 + 22301074;30032202 116892028 MODEL JAAIVD010000001;XM_032893486 XP_032749377 protein-coding 625846653 LOC116911569 ubiquitin-conjugating enzyme E2 S-A-like 10 11392641 11400727 + 116911569 MODEL JAAIVD010000005 pseudo 625846654 LOC116885293 2'-5'-oligoadenylate synthase 1A-like 16 33029717 33038295 - 30032202 116885293 MODEL JAAIVD010000004;XM_032886542 XP_032742433 protein-coding 625846665 LOC116912764 zinc finger protein GLI4-like 1 247959924 247965259 + 30032202 116912764 MODEL JAAIVD010000025;XM_032916918;XM_032916925 XP_032772809;XP_032772816 protein-coding 625846677 Cdca2 cell division cycle associated 2 ENCODES a protein that exhibits protein phosphatase regulator activity (ortholog); INVOLVED IN chromosome segregation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); myoepithelioma (ortholog); FOUND IN chromosome (ortholog); nucleoplasm (ortholog) 12 56764464 56810087 + 30032202 116913781 MODEL JAAIVD010000007;XM_032918087 XP_032773978 cell division cycle-associated protein 2 protein-coding 625846696 LOC116888101 leucine-rich repeat and calponin homology domain-containing protein 2-like X 98247377 98268818 - 22301074 116888101 MODEL JAAIVD010000014;XM_032889462 XP_032745353 protein-coding 625846706 Flt3 fms related receptor tyrosine kinase 3 ENCODES a protein that exhibits cytokine receptor activity (ortholog); nuclear glucocorticoid receptor binding (ortholog); phosphatidylinositol 3-kinase binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); B cell differentiation (ortholog); cellular response to cytokine stimulus (ortholog); ASSOCIATED WITH Acute Erythroleukemia (ortholog); acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); protein-containing complex (ortholog) 16 6442365 6517263 + 22301074;30032202 116885690 MODEL JAAIVD010000004;XM_032886997 XP_032742888 receptor-type tyrosine-protein kinase FLT3 protein-coding 625846734 LOC116903863 uncharacterized LOC116903863 1 144703781 144705926 - 116903863 MODEL JAAIVD010000025;XR_004388306;XR_004388307 ncrna 625846742 LOC116900122 olfactory receptor 50-like 5 14298162 14299085 + 22301074;30032202 116900122 MODEL JAAIVD010000023;XM_032901897 XP_032757788 protein-coding 625846745 Pkm pyruvate kinase M1/2 ENCODES a protein that exhibits ADP binding (ortholog); histone H3T11 kinase activity (ortholog); identical protein binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); canonical glycolysis (ortholog); glucose metabolic process (ortholog); PARTICIPATES IN glycolysis pathway; hypoxia inducible factor pathway; pyruvate metabolic pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); COVID-19 (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 53497467 53518958 + 22301074;30032202 116906546 MODEL JAAIVD010000027;XM_032909248;XM_032909251 XP_032765139;XP_032765142 pyruvate kinase PKM protein-coding 625846762 Ppp2r2c protein phosphatase 2 regulatory subunit Bgamma ASSOCIATED WITH Emphysema (ortholog) 11 68195668 68280249 - 22301074;30032202 116912082 MODEL JAAIVD010000006;XM_032915961;XM_032915962 XP_032771852;XP_032771853 protein phosphatase 2, regulatory subunit B, gamma protein-coding 625846778 Rnase6 ribonuclease A family member 6 ENCODES a protein that exhibits RNA nuclease activity (ortholog); INVOLVED IN antibacterial humoral response (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); defense response to Gram-negative bacterium (ortholog); ASSOCIATED WITH liver disease (ortholog); toxic encephalopathy (ortholog); FOUND IN cytoplasmic vesicle (ortholog); extracellular region (ortholog) 12 72147213 72149790 + 22301074;30032202 116914042 MODEL JAAIVD010000007;XM_032918321 XP_032774212 ribonuclease A family member k6;ribonuclease K6 protein-coding 625846784 Ngef neuronal guanine nucleotide exchange factor ENCODES a protein that exhibits ephrin receptor binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN ephrin receptor signaling pathway (ortholog); negative regulation of dendritic spine morphogenesis (ortholog); regulation of synapse pruning (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog) 4 159601397 159698108 - 22301074;30032202 116899606 MODEL JAAIVD010000003;XM_032901562;XM_032901563 XP_032757453;XP_032757454 ephexin-1 protein-coding 625846806 LOC116891840 probable ribosome biogenesis protein RLP24 2 108246249 108246739 + 30032202 116891840 MODEL JAAIVD010000001;XM_032893207 XP_032749098 protein-coding 625846809 Phykpl 5-phosphohydroxy-L-lysine phospho-lyase ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH Phosphohydroxylysinuria (ortholog) 9 34171646 34193134 + 22301074;30032202 116910512 MODEL JAAIVD010000002;XM_032914410;XM_032914411;XM_032914412;XM_032914413 XP_032770301;XP_032770302;XP_032770303;XP_032770304 protein-coding 625846841 LOC116897725 Y-box-binding protein 1-like 4 75276944 75281398 - 116897725 MODEL JAAIVD010000003 pseudo 625846842 Crtap cartilage associated protein INVOLVED IN negative regulation of post-translational protein modification (ortholog); peptidyl-proline hydroxylation to 3-hydroxy-L-proline (ortholog); protein stabilization (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); osteogenesis imperfecta (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog) 8 104971377 104987090 - 22301074;30032202 116907811 MODEL JAAIVD010000027;XM_032910989 XP_032766880 cartilage-associated protein protein-coding 625846853 LOC116910015 60S ribosomal protein L12-like 9 90461262 90461778 + 116910015 MODEL JAAIVD010000002 pseudo 625846854 LOC116889599 probable ubiquitin carboxyl-terminal hydrolase FAF-X Y 2135647 2265417 + 22301074;30032202 116889599 MODEL JAAIVD010000015;XM_032890532 XP_032746423 protein-coding 625846900 Pnmt phenylethanolamine N-methyltransferase ENCODES a protein that exhibits phenylethanolamine N-methyltransferase activity (ortholog); INVOLVED IN adrenal gland development (ortholog); cellular response to dexamethasone stimulus (ortholog); cellular response to growth factor stimulus (ortholog); PARTICIPATES IN alkaptonuria pathway; aromatic L-amino acid decarboxylase deficiency pathway; catecholamine biosynthetic pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Contusions (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); neuronal cell body (ortholog) 9 56005929 56007492 - 30032202 116909705 MODEL JAAIVD010000002;XM_032913375 XP_032769266 protein-coding 625846907 Rpap3 RNA polymerase II associated protein 3 FOUND IN cytosol (ortholog); R2TP complex (ortholog) 1 270491380 270521785 - 22301074 116884529 MODEL JAAIVD010000025;XM_032885668 XP_032741559 RNA polymerase II-associated protein 3 protein-coding 625846928 Arfip1 ARF interacting protein 1 ENCODES a protein that exhibits phosphatidylinositol-4-phosphate binding (ortholog); INVOLVED IN intracellular protein transport (ortholog); negative regulation of retrograde transport, endosome to Golgi (ortholog); regulation of protein secretion (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) 3 69017132 69100281 + 22301074;30032202 116896736 MODEL JAAIVD010000012;XM_032898160;XM_032898161;XM_032898163;XM_032898164 XP_032754051;XP_032754052;XP_032754054;XP_032754055 ADP ribosylation factor interacting protein 1;arfaptin-1 protein-coding 625846952 Arhgef28 Rho guanine nucleotide exchange factor 28 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN central nervous system neuron axonogenesis (ortholog); neurofilament cytoskeleton organization (ortholog); ASSOCIATED WITH Meniere's disease (ortholog) 3 198385056 198681000 + 22301074;30032202 116897261 MODEL JAAIVD010000012;XM_032898997 XP_032754888 protein-coding 625846992 Gtf3c1 general transcription factor IIIC subunit 1 ENCODES a protein that exhibits RNA polymerase III general transcription initiation factor activity (ortholog); INVOLVED IN transcription initiation at RNA polymerase III promoter (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH esophageal atresia/tracheoesophageal fistula (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); ribonucleoprotein complex (ortholog) 2 76222545 76289272 + 30032202 116891535 MODEL JAAIVD010000001;XM_032892690 XP_032748581 general transcription factor 3C polypeptide 1 protein-coding 625847033 LOC116885177 autism susceptibility gene 2 protein homolog 16 21435849 21922337 + 116885177 MODEL JAAIVD010000004;XM_032886391 XP_032742282 protein-coding 625847041 LOC116913136 cytochrome b-c1 complex subunit 10-like 12 7719943 7720109 + 22301074;30032202 116913136 MODEL JAAIVD010000007;XM_032917340 XP_032773231 protein-coding 625847044 LOC116888169 mRNA decay activator protein ZFP36L3-like X 116926801 116931990 + 22301074;30032202 116888169 MODEL JAAIVD010000014;XM_032889491 XP_032745382 protein-coding 625847050 Ffar2 free fatty acid receptor 2 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN cell surface pattern recognition receptor signaling pathway (ortholog); cellular response to fatty acid (ortholog); fat cell differentiation (ortholog); ASSOCIATED WITH essential hypertension (ortholog); FOUND IN cell projection (ortholog); plasma membrane (ortholog) 2 165194515 165195591 + 22301074;30032202 116894451 MODEL JAAIVD010000001;XM_032896156 XP_032752047 protein-coding 625847054 Ube2h ubiquitin conjugating enzyme E2 H ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein K11-linked ubiquitination (ortholog); protein K48-linked ubiquitination (ortholog); ASSOCIATED WITH autistic disorder (ortholog); polycystic ovary syndrome (ortholog) 6 109251481 109344630 + 30032202 116904004 MODEL JAAIVD010000024;XM_032906813;XM_032906814 XP_032762704;XP_032762705 ubiquitin-conjugating enzyme E2 H protein-coding 625847066 Nme9 NME/NM23 family member 9 8 90795779 90813108 + 116908253 MODEL JAAIVD010000027;XM_032911507 XP_032767398 thioredoxin domain-containing protein 6 protein-coding 625847082 Gtf2e1 general transcription factor IIE subunit 1 ENCODES a protein that exhibits RNA polymerase II general transcription initiation factor activity (ortholog); INVOLVED IN RNA polymerase II preinitiation complex assembly (ortholog); transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription factor TFIID complex (ortholog) 4 22484101 22515328 - 22301074;30032202 116898832 MODEL JAAIVD010000003;XM_032900185 XP_032756076 protein-coding 625847091 Gltp glycolipid transfer protein ENCODES a protein that exhibits glycolipid binding (ortholog); glycolipid transfer activity (ortholog); identical protein binding (ortholog); INVOLVED IN intermembrane lipid transfer (ortholog); regulation of glucosylceramide biosynthetic process (ortholog); response to immobilization stress (ortholog); FOUND IN cytosol (ortholog) 16 39259163 39279641 + 22301074;30032202 116885604 MODEL JAAIVD010000004;XM_032886906 XP_032742797 protein-coding 625847100 LOC116888684 KAT8 regulatory NSL complex subunit 2-like X 70132196 70133460 + 30032202 116888684 MODEL JAAIVD010000014;XM_032889978 XP_032745869 protein-coding 625847103 Tbr1 T-box brain transcription factor 1 ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN amygdala development (ortholog); cerebral cortex development (ortholog); chromatin remodeling (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); complex cortical dysplasia with other brain malformations (ortholog); FOUND IN nucleus (ortholog) 5 39447955 39459135 + 22301074;30032202 116901445 MODEL JAAIVD010000023;XM_032903379 XP_032759270 T-box brain protein 1 protein-coding 625847113 LOC116886177 uncharacterized LOC116886177 1 11326093 11327599 + 116886177 MODEL JAAIVD010000025;XR_004386092 ncrna 625847117 Stk38 serine/threonine kinase 38 ENCODES a protein that exhibits ATP binding (ortholog); histone reader activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN DNA damage checkpoint signaling (ortholog); DNA damage response (ortholog); intracellular signal transduction (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) 18 4859673 4892819 + 22301074;30032202 116886922 MODEL JAAIVD010000013;XM_032888402 XP_032744293 serine/threonine-protein kinase 38 protein-coding 625847135 Fetub fetuin B ENCODES a protein that exhibits metalloendopeptidase inhibitor activity (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); negative regulation of endopeptidase activity (ortholog); single fertilization (ortholog); ASSOCIATED WITH Spontaneous Abortions (ortholog) 4 7601630 7612579 + 22301074;30032202 116897809 A0A8A1UA06;A0A8A1UCI7 MODEL JAAIVD010000003;XM_032899222;XM_032899223 XP_032755113;XP_032755114 fetuin-B protein-coding 625847150 Moap1 modulator of apoptosis 1 ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); extrinsic apoptotic signaling pathway in absence of ligand (ortholog); extrinsic apoptotic signaling pathway via death domain receptors (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial outer membrane (ortholog) 7 114015323 114031033 - 30032202 116905361 MODEL JAAIVD010000026;XM_032908283;XM_032908284;XM_032908285 XP_032764174;XP_032764175;XP_032764176 protein-coding 625847161 LOC116900352 olfactory receptor 5W2-like 5 69175078 69176019 - 22301074;30032202 116900352 MODEL JAAIVD010000023;XM_032902105 XP_032757996 protein-coding 625847165 Rarg retinoic acid receptor gamma ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); bone development (ortholog); bone morphogenesis (ortholog); PARTICIPATES IN retinoic acid signaling pathway; ASSOCIATED WITH Cardiotoxicity (ortholog); cleft palate (ortholog); heart disease (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 260817589 260839271 + 22301074;30032202 116883531 MODEL JAAIVD010000025;XM_032884707;XM_032884713 XP_032740598;XP_032740604 protein-coding 625847182 LOC116900887 olfactory receptor 4S2-like 5 70000213 70001070 + 116900887 MODEL JAAIVD010000023 pseudo 625847183 LOC116897736 uncharacterized LOC116897736 4 102583151 102588524 - 116897736 MODEL JAAIVD010000003;XM_032899180 XP_032755071 uncharacterized protein LOC116897736 protein-coding 625847191 Utp11 UTP11 small subunit processome component INVOLVED IN nervous system development (ortholog); positive regulation of apoptotic process (ortholog); ribosomal small subunit biogenesis (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); nucleolus (ortholog) 1 33607740 33623379 + 22301074;30032202 116896904 MODEL JAAIVD010000025;XM_032898460 XP_032754351 probable U3 small nucleolar RNA-associated protein 11 protein-coding 625847203 LOC116898528 splicing regulatory glutamine/lysine-rich protein 1-like 4 140780134 140822235 + 116898528 MODEL JAAIVD010000003 pseudo 625847204 Jhy junctional cadherin complex regulator INVOLVED IN axoneme assembly (ortholog); brain development (ortholog); cell differentiation (ortholog) 8 35494430 35552223 - 30032202 116907906 MODEL JAAIVD010000027;XM_032911106 XP_032766997 jhy protein homolog protein-coding 625847217 LOC116889556 U2 spliceosomal RNA X 98688015 98688182 - 116889556 MODEL JAAIVD010000014 pseudo 625847218 LOC116904798 U4 spliceosomal RNA 6 43116298 43116418 + 116904798 MODEL JAAIVD010000024 pseudo 625847219 LOC116894022 olfactory receptor 51V1-like 2 101963824 101964768 + 22301074 116894022 MODEL JAAIVD010000001;XM_032895738 XP_032751629 protein-coding 625847222 Plekhm3 pleckstrin homology domain containing M3 INVOLVED IN myoblast differentiation (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) 4 138675018 138833587 - 116899455 MODEL JAAIVD010000003;XM_032901233;XM_032901234;XM_032901236;XM_032901237 XP_032757124;XP_032757125;XP_032757127;XP_032757128 pleckstrin homology domain-containing family M member 3 protein-coding 625847243 LOC116895608 RNA-binding protein FUS-like 3 158437852 158439384 + 116895608 MODEL JAAIVD010000012 pseudo 625847244 Eipr1 EARP complex and GARP complex interacting protein 1 INVOLVED IN endocytic recycling (ortholog); positive regulation of endocytic recycling (ortholog); positive regulation of retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH substance-related disorder (ortholog); FOUND IN EARP complex (ortholog); GARP complex (ortholog); nucleolus (ortholog) 7 42276265 42319286 + 22301074;30032202 116904933 MODEL JAAIVD010000026;XM_032907565 XP_032763456 EARP and GARP complex-interacting protein 1 protein-coding 625847255 LOC116893404 uncharacterized LOC116893404 2 173184441 173192051 - 30032202 116893404 MODEL JAAIVD010000001;XM_032895189 XP_032751080 uncharacterized protein LOC116893404 protein-coding 625847263 Spin1 spindlin 1 ENCODES a protein that exhibits histone H3K4me3 reader activity (ortholog); histone reader activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of Wnt signaling pathway (ortholog); protein localization to chromatin (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN chromatin (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 14 69494165 69544662 + 22301074;30032202 116884025 MODEL JAAIVD010000009;XM_032885261 XP_032741152 spindlin-1 protein-coding 625847273 Marchf11 membrane associated ring-CH-type finger 11 3 154414257 154513756 - 22301074;30032202 116897064 MODEL JAAIVD010000012;XM_032898688;XM_032898689 XP_032754579;XP_032754580 E3 ubiquitin-protein ligase MARCH11 protein-coding 625847286 Ciita class II major histocompatibility complex transactivator ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); histone deacetylase binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cellular response to electrical stimulus (ortholog); cellular response to exogenous dsRNA (ortholog); cellular response to type II interferon (ortholog); ASSOCIATED WITH acute kidney tubular necrosis (ortholog); Addison's disease (ortholog); Albuminuria (ortholog); FOUND IN cell surface (ortholog); nucleoplasm (ortholog); PML body (ortholog) 9 11822224 11869434 - 22301074;30032202 116908900 MODEL JAAIVD010000002;XM_032912353;XM_032912354 XP_032768244;XP_032768245 MHC class II transactivator protein-coding 625847312 LOC116902728 vomeronasal type-1 receptor 94-like 6 56638940 56639942 - 22301074;30032202 116902728 MODEL JAAIVD010000024;XM_032905078 XP_032760969 protein-coding 625847316 LOC116907749 uncharacterized LOC116907749 8 33256694 33327790 - 116907749 MODEL JAAIVD010000027;XR_004388841 ncrna 625847320 Serac1 serine active site containing 1 INVOLVED IN extracellular matrix organization (ortholog); intracellular cholesterol transport (ortholog); phosphatidylglycerol acyl-chain remodeling (ortholog); ASSOCIATED WITH 3-methylglutaconic aciduria with deafness, encephalopathy, and Leigh-like syndrome (ortholog); Deafness (ortholog); dystonia (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); extracellular matrix (ortholog) 2 192736383 192771966 + 116892855 MODEL JAAIVD010000001;XM_032894750 XP_032750641 protein SERAC1 protein-coding 625847341 Bdh2 3-hydroxybutyrate dehydrogenase 2 ENCODES a protein that exhibits 3-hydroxybutyrate dehydrogenase activity (ortholog); NAD binding (ortholog); oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); fatty acid beta-oxidation (ortholog); siderophore biosynthetic process (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 3 23789971 23806497 - 30032202 116895311 MODEL JAAIVD010000012;XM_032896621 XP_032752512 3-hydroxybutyrate dehydrogenase type 2 protein-coding 625847354 LOC116903870 uncharacterized LOC116903870 1 144661901 144670162 - 116903870 MODEL JAAIVD010000025;XR_004388308 ncrna 625847359 Upp2 uridine phosphorylase 2 ENCODES a protein that exhibits deoxyuridine phosphorylase activity (ortholog); identical protein binding (ortholog); pyrimidine-nucleoside phosphorylase activity (ortholog); INVOLVED IN CMP catabolic process (ortholog); dCMP catabolic process (ortholog); dTMP catabolic process (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; dihydropyrimidinase deficiency pathway; mitochondrial neurogastrointestinal encephalopathy syndrome pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN cytosol (ortholog); type III intermediate filament (ortholog) 5 36518187 36556034 + 22301074;30032202 116900181 MODEL JAAIVD010000023;XM_032901935;XM_032901937;XM_032901938 XP_032757826;XP_032757828;XP_032757829 protein-coding 625847377 Vipr1 vasoactive intestinal peptide receptor 1 ENCODES a protein that exhibits peptide hormone binding (ortholog); pituitary adenylate cyclase-activating polypeptide receptor activity (ortholog); vasoactive intestinal polypeptide receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger (ortholog); ASSOCIATED WITH achalasia (ortholog); Crohn's disease (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN signaling receptor complex (ortholog) 8 112806203 112832742 + 22301074;30032202 116907972 MODEL JAAIVD010000027;XM_032911202;XM_032911203;XM_032911204 XP_032767093;XP_032767094;XP_032767095 vasoactive intestinal polypeptide receptor 1 protein-coding 625847401 Ahrr aryl-hydrocarbon receptor repressor INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); nitric oxide metabolic process (ortholog); ASSOCIATED WITH hypertension (ortholog); Prenatal Exposure Delayed Effects (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 203675214 203720673 - 22301074;30032202 116893540 MODEL JAAIVD010000001;XM_032895260 XP_032751151 aryl hydrocarbon receptor repressor protein-coding 625847410 Rbm25 RNA binding motif protein 25 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN regulation of alternative mRNA splicing, via spliceosome (ortholog); regulation of apoptotic process (ortholog); FOUND IN nuclear speck (ortholog) 7 97726586 97774233 + 22301074;30032202 116905250 MODEL JAAIVD010000026;XM_032908096;XM_032908097;XM_032908098 XP_032763987;XP_032763988;XP_032763989 RNA-binding protein 25 protein-coding 625847438 LOC116899841 5S ribosomal RNA 4 132337952 132338070 - 116899841 MODEL JAAIVD010000003;XR_004387838 rrna 625847441 LOC116902620 small nucleolar RNA SNORD67 5 65747738 65747847 + 116902620 MODEL JAAIVD010000023;XR_004388198 snorna 625847444 LOC116895850 serine/Arginine-related protein 53-like 3 87935855 88241292 - 30032202 116895850 MODEL JAAIVD010000012;XM_032896959 XP_032752850 protein-coding 625847456 Ilf2 interleukin enhancer binding factor 2 ENCODES a protein that exhibits DNA binding (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 3 63131372 63142970 - 116896604 MODEL JAAIVD010000012;XM_032897855 XP_032753746 interleukin enhancer-binding factor 2 protein-coding 625847474 LOC116908211 60S ribosomal protein L27a-like 8 71994130 71994657 - 116908211 MODEL JAAIVD010000027 pseudo 625847475 LOC116894529 vomeronasal type-1 receptor 4-like 2 175754120 175755046 + 22301074;30032202 116894529 MODEL JAAIVD010000001;XM_032896233 XP_032752124 protein-coding 625847479 LOC116902276 GA-binding protein subunit beta-1-like 1 127668756 127696421 + 116902276 MODEL JAAIVD010000025 pseudo 625847480 LOC116898945 translin-associated protein X-like 4 47605775 47606654 - 116898945 MODEL JAAIVD010000003 pseudo 625847481 LOC116913847 ribosome biogenesis protein NOP53-like 12 58593623 58598061 + 116913847 MODEL JAAIVD010000007 pseudo 625847482 LOC116907248 heterogeneous nuclear ribonucleoprotein A1-like 8 12776159 12780413 + 116907248 MODEL JAAIVD010000027 pseudo 625847483 Dlg5 discs large MAGUK scaffold protein 5 ENCODES a protein that exhibits beta-catenin binding (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN apical protein localization (ortholog); epithelial to mesenchymal transition (ortholog); epithelial tube branching involved in lung morphogenesis (ortholog); ASSOCIATED WITH YUKSEL-VOGEL-BAUER SYNDROME (ortholog); FOUND IN adherens junction (ortholog); cell junction (ortholog); ciliary basal body (ortholog) 12 93851074 93958807 - 22301074 116914073 MODEL JAAIVD010000007;XM_032918379;XM_032918380 XP_032774270;XP_032774271 disks large homolog 5 protein-coding 625847522 Ccdc102a coiled-coil domain containing 102A 17 1780474 1796087 - 22301074 116886535 MODEL JAAIVD010000011;XM_032888055 XP_032743946 coiled-coil domain-containing protein 102A protein-coding 625847535 Trim7 tripartite motif containing 7 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 9 31436695 31450529 + 22301074 116909963 MODEL JAAIVD010000002;XM_032913738 XP_032769629 E3 ubiquitin-protein ligase TRIM7 protein-coding 625847546 Icmt isoprenylcysteine carboxyl methyltransferase ENCODES a protein that exhibits cAMP response element binding protein binding (ortholog); protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity (ortholog); INVOLVED IN bone mineralization (ortholog); C-terminal protein methylation (ortholog); CAAX-box protein maturation (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 1 8439684 8446505 - 22301074;30032202 116892271 MODEL JAAIVD010000025;XM_032893863 XP_032749754 protein-S-isoprenylcysteine O-methyltransferase protein-coding 625847555 Bmp4 bone morphogenetic protein 4 ENCODES a protein that exhibits BMP receptor binding (ortholog); chemoattractant activity (ortholog); co-receptor binding (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); anatomical structure regression (ortholog); angiogenesis (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; glypican signaling pathway; ASSOCIATED WITH ACTH-secreting pituitary adenoma (ortholog); Acute Otitis Media (ortholog); Alzheimer's disease (ortholog); FOUND IN extracellular region (ortholog); vesicle (ortholog) 12 76673818 76680803 + 22301074;30032202 116913799 MODEL JAAIVD010000007;XM_032918105 XP_032773996 protein-coding 625847563 Zeb2 zinc finger E-box binding homeobox 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); R-SMAD binding (ortholog); INVOLVED IN astrocyte activation (ortholog); cell proliferation in forebrain (ortholog); central nervous system development (ortholog); ASSOCIATED WITH Brain Hypoxia-Ischemia (ortholog); Breast Neoplasms (ortholog); cerebellar disease (ortholog); FOUND IN chromatin (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 5 22989056 23120256 - 30032202 116901386 MODEL JAAIVD010000023;XM_032903254;XM_032903256;XM_032903257 XP_032759145;XP_032759147;XP_032759148 zinc finger E-box-binding homeobox 2 protein-coding 625847585 LOC116890524 small nucleolar RNA SNORA17 1 138041768 138041898 - 116890524 MODEL JAAIVD010000025;XR_004386706 snorna 625847588 LOC116889107 26S proteasome regulatory subunit 10B-like X 110657965 110659274 - 22301074;30032202 116889107 MODEL JAAIVD010000014;XM_032890273 XP_032746164 protein-coding 625847593 LOC116900290 olfactory receptor 8K3-like 5 63608041 63608856 - 22301074;30032202 116900290 MODEL JAAIVD010000023;XM_032902045 XP_032757936 protein-coding 625847596 LOC116915059 beta-defensin 39 13 65049697 65053421 + 22301074;30032202 116915059 MODEL JAAIVD010000008;XM_032919476 XP_032775367 protein-coding 625847601 Rab12 RAB12, member RAS oncogene family ENCODES a protein that exhibits GDP binding (ortholog); INVOLVED IN cellular response to type II interferon (ortholog); endosome to lysosome transport (ortholog); positive regulation of macroautophagy (ortholog); ASSOCIATED WITH Myocardial Ischemia (ortholog); FOUND IN autophagosome (ortholog); lysosome (ortholog); phagocytic vesicle (ortholog) 4 176165321 176191384 - 22301074;30032202 116899700 MODEL JAAIVD010000003;XM_032901724 XP_032757615 ras-related protein Rab-12 protein-coding 625847611 Slc50a1 solute carrier family 50 member 1 ENCODES a protein that exhibits glucoside transmembrane transporter activity (ortholog); FOUND IN endomembrane system (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) 3 64404434 64406829 + 22301074;30032202 116896653 MODEL JAAIVD010000012;XM_032897985 XP_032753876 sugar transporter SWEET1 protein-coding 625847621 Scamp5 secretory carrier membrane protein 5 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN negative regulation of endocytosis (ortholog); positive regulation of calcium ion-dependent exocytosis (ortholog); positive regulation of cytokine production (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal recessive intellectual developmental disorder 41 (ortholog); basal cell carcinoma (ortholog); FOUND IN Golgi membrane (ortholog); membrane (ortholog); plasma membrane (ortholog) 8 51333005 51359163 - 22301074;30032202 116908084 MODEL JAAIVD010000027;XM_032911361;XM_032911362;XM_032911363;XM_032911364 XP_032767252;XP_032767253;XP_032767254;XP_032767255 secretory carrier-associated membrane protein 5 protein-coding 625847640 LOC116906874 eukaryotic translation initiation factor 1-like 8 67637061 67637711 - 22301074;30032202 116906874 MODEL JAAIVD010000027;XM_032909786 XP_032765677 protein-coding 625847645 Mlc1 modulator of VRAC current 1 ENCODES a protein that exhibits identical protein binding (ortholog); monoatomic ion channel activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN caveolin-mediated endocytosis (ortholog); cellular response to cholesterol (ortholog); monoatomic ion transmembrane transport (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); cerebellar ataxia (ortholog); genetic disease (ortholog); FOUND IN apical plasma membrane (ortholog); astrocyte end-foot (ortholog); basolateral plasma membrane (ortholog) 1 258274350 258294156 - 30032202 116914893 MODEL JAAIVD010000025;XM_032919340 XP_032775231 membrane protein MLC1 protein-coding 625847661 Eif4ebp1 eukaryotic translation initiation factor 4E binding protein 1 ENCODES a protein that exhibits eukaryotic initiation factor 4E binding (ortholog); protein phosphatase 2A binding (ortholog); translation initiation factor binding (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cellular response to hypoxia (ortholog); G1/S transition of mitotic cell cycle (ortholog); PARTICIPATES IN insulin signaling pathway; mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); human immunodeficiency virus infectious disease (ortholog); Inflammation (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); nucleoplasm (ortholog) 13 59257609 59272187 - 22301074;30032202 116914480 MODEL JAAIVD010000008;XM_032918783 XP_032774674 eukaryotic translation initiation factor 4E-binding protein 1 protein-coding 625847668 Ptcra pre T cell antigen receptor alpha INVOLVED IN alpha-beta T cell differentiation (ortholog); negative regulation of thymocyte apoptotic process (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH Immunodeficiency 126 (ortholog); polycystic ovary syndrome (ortholog); FOUND IN plasma membrane (ortholog) 4 83103882 83112599 + 30032202 116898045 MODEL JAAIVD010000003;XM_032899438 XP_032755329 pre T-cell antigen receptor alpha protein-coding 625847675 Zic1 Zic family zinc finger 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN adult walking behavior (ortholog); brain development (ortholog); central nervous system development (ortholog); ASSOCIATED WITH craniosynostosis (ortholog); craniosynostosis 6 (ortholog); Dandy-Walker syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 8 83101629 83106418 - 30032202 116906914 MODEL JAAIVD010000027;XM_032909834;XM_032909835 XP_032765725;XP_032765726 Zic family member 1;zinc finger protein ZIC 1 protein-coding 625847686 LOC116890487 small nucleolar RNA SNORD37 1 153709773 153709836 - 116890487 MODEL JAAIVD010000025;XR_004386674 snorna 625847689 Wls Wnt ligand secretion mediator ENCODES a protein that exhibits identical protein binding (ortholog); mu-type opioid receptor binding (ortholog); INVOLVED IN anterior/posterior axis specification (ortholog); cementum mineralization (ortholog); exocrine pancreas development (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Zaki syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); dendrite cytoplasm (ortholog) 3 2283674 2380963 + 30032202 116896121 A0A8A1UE35 MODEL JAAIVD010000012;XM_032897085;XM_032897086 XP_032752976;XP_032752977 protein wntless homolog protein-coding 625847710 LOC116903747 MICOS complex subunit Mic26-like 6 84968983 84969571 - 116903747 MODEL JAAIVD010000024 pseudo 625847711 LOC116886616 carboxylesterase 1C-like 17 14592218 14601258 - 30032202 116886616 MODEL JAAIVD010000011;XM_032888124 XP_032744015 protein-coding 625847718 LOC116892742 protein phosphatase 1 regulatory subunit 14C-like 2 180474210 180476121 - 22301074;30032202 116892742 MODEL JAAIVD010000001;XM_032894615 XP_032750506 protein-coding 625847723 Slc7a7 solute carrier family 7 member 7 ENCODES a protein that exhibits basic amino acid transmembrane transporter activity (ortholog); INVOLVED IN amino acid import across plasma membrane (ortholog); L-arginine transmembrane transport (ortholog); L-leucine transport (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); Chediak-Higashi syndrome (ortholog); genetic disease (ortholog); FOUND IN basolateral plasma membrane (ortholog) 12 70583774 70631829 + 22301074;30032202 116913432 MODEL JAAIVD010000007;XM_032917624;XM_032917625;XM_032917627;XM_032917628 XP_032773515;XP_032773516;XP_032773518;XP_032773519 Y+L amino acid transporter 1 protein-coding 625847747 LOC116915156 U4 spliceosomal RNA 13 59967401 59967528 + 116915156 MODEL JAAIVD010000008 pseudo 625847748 LOC116899752 U6 spliceosomal RNA 4 103561121 103561224 + 116899752 MODEL JAAIVD010000003;XR_004387767 snrna 625847751 LOC116908465 U6 spliceosomal RNA 8 106879007 106879112 - 116908465 MODEL JAAIVD010000027;XR_004388983 snrna 625847754 Jph1 junctophilin 1 ENCODES a protein that exhibits structural constituent of muscle (ortholog); INVOLVED IN muscle organ development (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease axonal type 2K (ortholog); congenital myopathy (ortholog); congenital myopathy 25 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); junctional membrane complex (ortholog) 1 151112238 151208794 - 22301074;30032202 116904100 MODEL JAAIVD010000025;XM_032906972;XM_032906981;XM_032906990;XM_032906998 XP_032762863;XP_032762872;XP_032762881;XP_032762889 junctophilin-1 protein-coding 625847771 LOC116885680 leukosialin-like 16 14659960 14664771 - 116885680 MODEL JAAIVD010000004 pseudo 625847772 LOC116889159 ubiquitin-conjugating enzyme E2 variant 1-like X 51941375 51941876 - 116889159 MODEL JAAIVD010000014 pseudo 625847773 Mgst2 microsomal glutathione S-transferase 2 ENCODES a protein that exhibits glutathione binding (ortholog); glutathione peroxidase activity (ortholog); glutathione transferase activity (ortholog); INVOLVED IN glutathione biosynthetic process (ortholog); leukotriene biosynthetic process (ortholog); lipid catabolic process (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); Liver Reperfusion Injury (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog); plasma membrane (ortholog) 3 102777246 102799051 - 22301074;30032202 116896886 MODEL JAAIVD010000012;XM_032898432;XM_032898433 XP_032754323;XP_032754324 protein-coding 625847787 Dand5 DAN domain BMP antagonist family member 5 ENCODES a protein that exhibits morphogen activity (ortholog); receptor ligand inhibitor activity (ortholog); INVOLVED IN atrial septum development (ortholog); determination of heart left/right asymmetry (ortholog); determination of left/right asymmetry in lateral mesoderm (ortholog); ASSOCIATED WITH visceral heterotaxy (ortholog); visceral heterotaxy 13 (ortholog); visceral heterotaxy 5 (ortholog) 17 15470943 15476893 + 30032202 116886029 MODEL JAAIVD010000011;XM_032887320 XP_032743211 DAN domain family member 5 protein-coding 625847792 LOC116889347 barrier-to-autointegration factor-like X 54685655 54685917 + 116889347 MODEL JAAIVD010000014 pseudo 625847793 LOC116888423 embryonic testis differentiation protein-like X 130338623 130338812 - 116888423 MODEL JAAIVD010000014;XM_032889692 XP_032745583 protein-coding 625847798 LOC116909435 casein kinase II subunit alpha-like 9 36593675 36594617 - 116909435 MODEL JAAIVD010000002 pseudo 625847799 LOC116900273 olfactory receptor 1038 5 63357370 63358329 + 22301074;30032202 116900273 MODEL JAAIVD010000023;XM_032902025 XP_032757916 protein-coding 625847802 LOC116887876 actin, clone 302-like X 48469802 48490708 - 116887876 MODEL JAAIVD010000014 pseudo 625847803 LOC116900805 kunitz-type protease inhibitor 4-like 5 153260048 153262366 - 22301074 116900805 MODEL JAAIVD010000023;XM_032902521 XP_032758412 protein-coding 625847807 Chpf chondroitin polymerizing factor ENCODES a protein that exhibits acetylgalactosaminyltransferase activity (ortholog); glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity (ortholog); glycosyltransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog) 4 148824836 148829538 - 22301074;30032202 116899536 MODEL JAAIVD010000003;XM_032901412;XM_032901413 XP_032757303;XP_032757304 chondroitin sulfate synthase 2 protein-coding 625847818 Ppp2ca protein phosphatase 2 catalytic subunit alpha ENCODES a protein that exhibits beta-2 adrenergic receptor binding (ortholog); enzyme binding (ortholog); GABA receptor binding (ortholog); INVOLVED IN cardiac ventricle development (ortholog); cellular response to calcium ion (ortholog); cellular response to cytokine stimulus (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; ataxia telangiectasia-mutated (ATM) signaling pathway; calcium/calmodulin dependent kinase 2 signaling pathway; ASSOCIATED WITH asthma (ortholog); congestive heart failure (ortholog); Experimental Liver Neoplasms (ortholog); FOUND IN chromatin (ortholog); chromosome, centromeric region (ortholog); cytoplasm (ortholog) 9 34685976 34706593 + 2554256;30032202 116908563 MODEL JAAIVD010000002;X16043;XM_032911767 CAA34166;XP_032767658 serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform protein-coding 625847829 Aldoa aldolase, fructose-bisphosphate A ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); fructose binding (ortholog); fructose-bisphosphate aldolase activity (ortholog); INVOLVED IN ATP biosynthetic process (ortholog); binding of sperm to zona pellucida (ortholog); canonical glycolysis (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Neoplasms (ortholog); Endotoxemia (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); extracellular exosome (ortholog) 2 75098106 75102098 + 22301074;30032202 116891506 MODEL JAAIVD010000001;XM_032892639 XP_032748530 fructose-bisphosphate aldolase A protein-coding 625847843 Megf8 multiple EGF like domains 8 INVOLVED IN aorta development (ortholog); BMP signaling pathway (ortholog); cell migration involved in gastrulation (ortholog); ASSOCIATED WITH Carpenter syndrome (ortholog); Carpenter syndrome 2 (ortholog); craniosynostosis (ortholog); FOUND IN nucleus (ortholog); ubiquitin ligase complex (ortholog) 2 169350586 169398556 - 22301074 116892461 MODEL JAAIVD010000001;XM_032894177 XP_032750068 multiple epidermal growth factor-like domains protein 8 protein-coding 625847888 LOC116893889 integrin alpha-X 2 73775368 73795930 - 22301074;30032202 116893889 MODEL JAAIVD010000001;XM_032895608;XM_032895609 XP_032751499;XP_032751500 protein-coding 625847925 Si sucrase-isomaltase ENCODES a protein that exhibits alpha-1,4-glucosidase activity (ortholog); beta-fructofuranosidase activity (ortholog); oligo-1,6-glucosidase activity (ortholog); INVOLVED IN carbohydrate utilization (ortholog); intestinal epithelial cell maturation (ortholog); response to cortisone (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; glycogen storage disease type III pathway; glycogen storage disease type IV pathway; ASSOCIATED WITH colitis (ortholog); congenital sucrase-isomaltase deficiency (ortholog); exocrine pancreatic insufficiency (ortholog); FOUND IN apical plasma membrane (ortholog); brush border (ortholog); brush border membrane (ortholog) 3 83222673 83303117 + 22301074;30032202 116895461 MODEL JAAIVD010000012;XM_032896729 XP_032752620 sucrase-isomaltase, intestinal protein-coding 625847976 LOC116897776 60S ribosomal protein L31-like 4 3001422 3001808 + 116897776 MODEL JAAIVD010000003 pseudo 625847977 Ccl22 C-C motif chemokine ligand 22 INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); monocyte chemotaxis (ortholog); ASSOCIATED WITH anti-basement membrane glomerulonephritis (ortholog); asthma (ortholog); atopic dermatitis (ortholog); FOUND IN extracellular region (ortholog) 17 1634770 1640980 + 22301074;30032202 116886467 MODEL JAAIVD010000011;XM_032887969 XP_032743860 C-C motif chemokine 22 protein-coding 625847984 LOC116902688 HIG1 domain family member 1A, mitochondrial-like 6 39855511 39855785 + 116902688 MODEL JAAIVD010000024 pseudo 625847985 Rgmb repulsive guidance molecule BMP co-receptor b ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cell adhesion (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH Prostatic Neoplasms (ortholog); rheumatoid arthritis (ortholog); FOUND IN endoplasmic reticulum-Golgi intermediate compartment (ortholog); plasma membrane (ortholog) 14 186946 213168 + 30032202 116883300 MODEL JAAIVD010000009;XM_032884345;XM_032884346;XM_032884347;XM_032884348 XP_032740236;XP_032740237;XP_032740238;XP_032740239 RGM domain family member B protein-coding 625848002 Panx1 pannexin 1 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); ATP transmembrane transporter activity (ortholog); INVOLVED IN ATP transport (ortholog); calcium ion transport (ortholog); cell-cell signaling (ortholog); PARTICIPATES IN neuron-to-neuron signaling pathway via the electrical synapse; ASSOCIATED WITH Acute Liver Failure (ortholog); autosomal recessive polycystic kidney disease (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN bleb (ortholog); endoplasmic reticulum (ortholog); gap junction (ortholog) 8 10803798 10841293 - 30032202 116906795 MODEL JAAIVD010000027;XM_032909661 XP_032765552 pannexin-1 protein-coding 625848011 Atad5 ATPase family AAA domain containing 5 ENCODES a protein that exhibits DNA clamp unloader activity (ortholog); INVOLVED IN cell population proliferation (ortholog); DNA damage response (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); ASSOCIATED WITH Developmental Disease (ortholog); neurilemmoma (ortholog); ovarian carcinoma (ortholog); FOUND IN Elg1 RFC-like complex (ortholog); nucleus (ortholog) 9 90293627 90341150 - 22301074;30032202 116909126 MODEL JAAIVD010000002;XM_032912602;XM_032912603 XP_032768493;XP_032768494 ATPase family AAA domain-containing protein 5 protein-coding 625848039 LOC116903054 taste receptor type 2 member 129-like 6 15918645 15919608 + 22301074;30032202 116903054 MODEL JAAIVD010000024;XM_032905353 XP_032761244 protein-coding 625848042 Tigd5 tigger transposable element derived 5 1 248228932 248233030 + 22301074;30032202 116912694 MODEL JAAIVD010000025;XM_032916828 XP_032772719 tigger transposable element-derived protein 5 protein-coding 625848047 Tceal9 transcription elongation factor A like 9 ENCODES a protein that exhibits WW domain binding (ortholog) X 88249168 88251199 + 116888875 MODEL JAAIVD010000014;XM_032890139;XM_032890140;XM_032890141 XP_032746030;XP_032746031;XP_032746032 transcription elongation factor A protein-like 9 protein-coding 625848062 Med14 mediator complex subunit 14 ENCODES a protein that exhibits transcription coactivator activity (ortholog); transcription coregulator activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription initiation by RNA polymerase II (ortholog); PARTICIPATES IN cortisol signaling pathway; RNA polymerase II transcription pathway; ASSOCIATED WITH endometriosis (ortholog); intellectual disability (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN mediator complex (ortholog); nucleus (ortholog) X 8631948 8714990 + 22301074;30032202 116888990 MODEL JAAIVD010000014;XM_032890208 XP_032746099 mediator of RNA polymerase II transcription subunit 14 protein-coding 625848097 Supt7l SPT7 like, STAGA complex subunit gamma ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN maintenance of protein location in nucleus (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH FISCHER-ZIRNSAK PROGEROID SYNDROME (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); SAGA complex (ortholog) 7 22642572 22653525 + 22301074;30032202 116905967 MODEL JAAIVD010000026;XM_032908972 XP_032764863 STAGA complex 65 subunit gamma protein-coding 625848106 Igfbp6 insulin like growth factor binding protein 6 ENCODES a protein that exhibits identical protein binding (ortholog); insulin-like growth factor I binding (ortholog); insulin-like growth factor II binding (ortholog); INVOLVED IN cell migration (ortholog); positive regulation of MAPK cascade (ortholog); positive regulation of stress-activated MAPK cascade (ortholog); PARTICIPATES IN insulin-like growth factor signaling pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); breast cancer (ortholog); contact dermatitis (ortholog); FOUND IN extracellular region (ortholog); insulin-like growth factor binary complex (ortholog) 1 260925911 260930882 - 22301074;30032202 116890197 MODEL JAAIVD010000025;XM_032890932 XP_032746823 insulin-like growth factor-binding protein 6 protein-coding 625848114 LOC116910036 macrophage migration inhibitory factor-like 9 69918357 69918706 + 30032202 116910036 MODEL JAAIVD010000002;XM_032913821 XP_032769712 protein-coding 625848118 Pkdcc protein kinase domain containing, cytoplasmic ENCODES a protein that exhibits non-membrane spanning protein tyrosine kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN bone mineralization (ortholog); embryonic digestive tract development (ortholog); limb morphogenesis (ortholog); ASSOCIATED WITH genetic disease (ortholog); intrinsic asthma (ortholog); RHIZOMELIC LIMB SHORTENING WITH DYSMORPHIC FEATURES (ortholog); FOUND IN extracellular region (ortholog); Golgi apparatus (ortholog) 7 9714142 9723883 - 22301074;30032202 116905799 MODEL JAAIVD010000026;XM_032908773 XP_032764664 extracellular tyrosine-protein kinase PKDCC protein-coding 625848129 LOC116904614 taste receptor type 2 member 7 6 16728006 16728944 + 22301074;30032202 116904614 MODEL JAAIVD010000024;XM_032907407 XP_032763298 protein-coding 625848132 Lsm1 LSM1 homolog, mRNA degradation associated ENCODES a protein that exhibits mRNA binding (ortholog); pre-mRNA binding (ortholog); INVOLVED IN histone mRNA catabolic process (ortholog); negative regulation of neuron differentiation (ortholog); stem cell population maintenance (ortholog); ASSOCIATED WITH cryptorchidism (ortholog); developmental and epileptic encephalopathy 11 (ortholog); Developmental Disabilities (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendrite (ortholog) 13 60697417 60713458 - 30032202 116914278 MODEL JAAIVD010000008;XM_032918501 XP_032774392 U6 snRNA-associated Sm-like protein LSm1 protein-coding 625848140 LOC116900257 40S ribosomal protein S15-like 5 63150002 63150425 - 116900257 MODEL JAAIVD010000023 pseudo 625848141 LOC116911895 U6 spliceosomal RNA 10 22092688 22092749 + 116911895 MODEL JAAIVD010000005 pseudo 625848142 Tor3a torsin family 3 member A ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) 10 35998738 36024525 - 22301074;30032202 116911106 MODEL JAAIVD010000005;XM_032914948 XP_032770839 torsin-3A protein-coding 625848152 LOC116908260 40S ribosomal protein SA-like 8 98610871 98611729 - 116908260 MODEL JAAIVD010000027 pseudo 625848153 Pcid2 PCI domain containing 2 INVOLVED IN negative regulation of gene expression, epigenetic (ortholog); negative regulation of lymphoid progenitor cell differentiation (ortholog); poly(A)+ mRNA export from nucleus (ortholog); FOUND IN cytoplasm (ortholog); nuclear pore nuclear basket (ortholog); nucleoplasm (ortholog) 13 70581986 70609113 + 30032202 116914593 MODEL JAAIVD010000008;XM_032918954 XP_032774845 PCI domain-containing protein 2 protein-coding 625848171 Tmem207 transmembrane protein 207 ASSOCIATED WITH epidermal appendage tumor (ortholog); FOUND IN early endosome membrane (ortholog) 4 13677043 13696052 + 116897840 MODEL JAAIVD010000003;XM_032899256 XP_032755147 protein-coding 625848179 Kcnk3 potassium two pore domain channel subfamily K member 3 ENCODES a protein that exhibits monoatomic ion channel activity (ortholog); open rectifier potassium channel activity (ortholog); outward rectifier potassium channel activity (ortholog); INVOLVED IN cellular response to acidic pH (ortholog); cellular response to hypoxia (ortholog); cellular response to zinc ion (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Deafness (ortholog); genetic disease (ortholog); FOUND IN plasma membrane (ortholog) 7 23453006 23490667 - 22301074;30032202 116906005 MODEL JAAIVD010000026;XM_032909045 XP_032764936 potassium channel subfamily K member 3 protein-coding 625848185 LOC116905618 L-lactate dehydrogenase A chain-like 7 17651183 17652166 - 116905618 MODEL JAAIVD010000026 pseudo 625848186 LOC116883597 cathepsin R 14 77109100 77114623 + 30032202 116883597 MODEL JAAIVD010000009;XM_032884778 XP_032740669 protein-coding 625848198 LOC116914607 uncharacterized LOC116914607 13 14415757 14427928 + 116914607 MODEL JAAIVD010000008;XR_004389756 ncrna 625848203 Epb41l2 erythrocyte membrane protein band 4.1 like 2 ENCODES a protein that exhibits PH domain binding (ortholog); spectrin binding (ortholog); INVOLVED IN positive regulation of protein localization to cell cortex (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cell cortex (ortholog); cell junction (ortholog); COP9 signalosome (ortholog) 2 211413571 211576492 + 22301074;30032202 116892955 MODEL JAAIVD010000001;XM_032894906 XP_032750797 band 4.1-like protein 2 protein-coding 625848227 LOC116885933 purine nucleoside phosphorylase-like 16 21232594 21233498 - 116885933 MODEL JAAIVD010000004 pseudo 625848228 LOC116891804 olfactory receptor 52B4-like 2 102491373 102492323 + 22301074 116891804 MODEL JAAIVD010000001;XM_032893160 XP_032749051 protein-coding 625848231 Adgrg5 adhesion G protein-coupled receptor G5 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); FOUND IN plasma membrane (ortholog) 17 1801665 1820506 + 22301074;30032202 116886263 MODEL JAAIVD010000011;XM_032887685 XP_032743576 adhesion G-protein coupled receptor G5 protein-coding 625848247 LOC116913239 dnaJ homolog subfamily B member 6-like 12 75413997 75415697 + 30032202 116913239 MODEL JAAIVD010000007;XM_032917403 XP_032773294 protein-coding 625848253 LOC116893470 homeobox protein ceh-37-like 2 180228423 180229920 + 22301074;30032202 116893470 MODEL JAAIVD010000001;XM_032895228 XP_032751119 protein-coding 625848258 LOC116912722 neo-calmodulin-like 11 58254509 58254751 - 116912722 MODEL JAAIVD010000006;XM_032916855 XP_032772746 protein-coding 625848261 Zp2 zona pellucida glycoprotein 2 ENCODES a protein that exhibits acrosin binding (ortholog); identical protein binding (ortholog); structural constituent of egg coat (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); humoral immune response mediated by circulating immunoglobulin (ortholog); prevention of polyspermy (ortholog); ASSOCIATED WITH Oocyte/Zygote/Embryo Maturation Arrest 6 (ortholog); FOUND IN egg coat (ortholog); endoplasmic reticulum (ortholog); extracellular matrix (ortholog) 2 81535856 81553831 + 30032202 116891586 MODEL JAAIVD010000001;XM_032892766 XP_032748657 zona pellucida sperm-binding protein 2 protein-coding 625848283 Stim1 stromal interaction molecule 1 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); calcium ion binding (ortholog); channel activator activity (ortholog); INVOLVED IN activation of store-operated calcium channel activity (ortholog); detection of calcium ion (ortholog); enamel mineralization (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH colorectal cancer (ortholog); common variable immunodeficiency 10 (ortholog); congenital structural myopathy (ortholog); FOUND IN cortical endoplasmic reticulum (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 2 102173443 102331809 + 22301074;30032202 116891800 MODEL JAAIVD010000001;XM_032893154;XM_032893155;XM_032893157 XP_032749045;XP_032749046;XP_032749048 protein-coding 625848307 LOC116897532 small nucleolar RNA SNORA48 3 19987980 19988121 - 116897532 MODEL JAAIVD010000012;XR_004387547 snorna 625848310 Aqp7 aquaporin 7 ENCODES a protein that exhibits glycerol channel activity (ortholog); urea channel activity (ortholog); urea transmembrane transporter activity (ortholog); INVOLVED IN glycerol transmembrane transport (ortholog); renal water absorption (ortholog); response to xenobiotic stimulus (ortholog); PARTICIPATES IN water transport pathway; ASSOCIATED WITH colitis (ortholog); Crohn's disease (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN brush border membrane (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) 1 117127798 117141913 + 30032202 116889046 MODEL JAAIVD010000025;XM_032890240;XM_032890245;XM_032890248 XP_032746131;XP_032746136;XP_032746139 aquaporin-7 protein-coding 625848327 Grik5 glutamate ionotropic receptor kainate type subunit 5 ENCODES a protein that exhibits glutamate receptor activity (ortholog); glutamate-gated receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); chemical synaptic transmission (ortholog); establishment of localization in cell (ortholog); ASSOCIATED WITH chronic obstructive pulmonary disease (ortholog); Experimental Seizures (ortholog); Reperfusion Injury (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); endoplasmic reticulum (ortholog) 2 169634743 169695614 + 22301074;30032202 116892472 MODEL JAAIVD010000001;XM_032894197 XP_032750088 glutamate receptor ionotropic, kainate 5 protein-coding 625848351 Rab2b RAB2B, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); INVOLVED IN defense response to virus (ortholog); Golgi organization (ortholog); innate immune response (ortholog); FOUND IN acrosomal vesicle (ortholog); autophagosome membrane (ortholog); Golgi apparatus (ortholog) 12 71612996 71630679 + 22301074;30032202 116913946 MODEL JAAIVD010000007;XM_032918211 XP_032774102 ras-related protein Rab-2B protein-coding 625848363 LOC116913460 tumor necrosis factor receptor superfamily member 10B-like 12 54551834 54572256 - 22301074;30032202 116913460 MODEL JAAIVD010000007;XM_032917662 XP_032773553 protein-coding 625848375 Cfap77 cilia and flagella associated protein 77 INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal B tubule inner sheath (ortholog); axonemal microtubule (ortholog); axoneme (ortholog) 5 7624577 7746851 + 116900064 MODEL JAAIVD010000023;XM_032901853 XP_032757744 cilia- and flagella-associated protein 77 protein-coding 625848385 LOC116900323 olfactory receptor 1052-like 5 64403585 64404523 - 22301074;30032202 116900323 MODEL JAAIVD010000023;XM_032902079 XP_032757970 protein-coding 625848388 LOC116898976 uncharacterized LOC116898976 4 51922059 51924354 + 116898976 MODEL JAAIVD010000003;XM_032900401 XP_032756292 uncharacterized protein LOC116898976 protein-coding 625848393 Apaf1 apoptotic peptidase activating factor 1 ENCODES a protein that exhibits cysteine-type endopeptidase activator activity involved in apoptotic process (ortholog); heat shock protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN brain development (ortholog); cardiac muscle cell apoptotic process (ortholog); cell differentiation (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH Brain Injuries (ortholog); brain ischemia (ortholog); colon cancer (ortholog); FOUND IN apoptosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 170071689 170158638 - 22301074 116908116 MODEL JAAIVD010000025;XM_032911402 XP_032767293 apoptotic protease-activating factor 1 protein-coding 625848424 Mybbp1a MYB binding protein 1a ENCODES a protein that exhibits E-box binding (ortholog); sequence-specific DNA binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN cellular response to glucose starvation (ortholog); circadian regulation of gene expression (ortholog); intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Meniere's disease (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); NLS-dependent protein nuclear import complex (ortholog); nucleolus (ortholog) 9 43068873 43079620 - 22301074;30032202 116908517 MODEL JAAIVD010000002;XM_032911692 XP_032767583 myb-binding protein 1A protein-coding 625848454 LOC116887665 60S ribosomal protein L39-like 18 28354948 28355104 + 116887665 MODEL JAAIVD010000013 pseudo 625848455 LOC116895836 glyceraldehyde-3-phosphate dehydrogenase-like 3 80778503 80779494 - 116895836 MODEL JAAIVD010000012 pseudo 625848456 LOC116903646 microtubule-associated proteins 1A/1B light chain 3B-like 6 154587959 154588565 + 116903646 MODEL JAAIVD010000024 pseudo 625848457 LOC116885848 vomeronasal type-2 receptor 116-like 16 2997157 3144659 + 116885848 MODEL JAAIVD010000004 pseudo 625848458 LOC116907762 olfactory receptor 10S1 8 82837836 82838801 + 22301074 116907762 MODEL JAAIVD010000027;XM_032910901 XP_032766792 protein-coding 625848461 LOC116884421 60S ribosomal protein L32-like 15 75521800 75522183 - 116884421 MODEL JAAIVD010000010 pseudo 625848462 Zfat zinc finger and AT-hook domain containing ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); hemopoiesis (ortholog); spongiotrophoblast layer development (ortholog); ASSOCIATED WITH autoimmune thyroiditis (ortholog) 14 40197556 40376092 + 30032202 116883743 MODEL JAAIVD010000009;XM_032884972;XM_032884973;XM_032884974;XM_032884975;XM_032884977 XP_032740863;XP_032740864;XP_032740865;XP_032740866;XP_032740868 zinc finger protein ZFAT protein-coding 625848499 Mamdc4 MAM domain containing 4 ENCODES a protein that exhibits protein histidine phosphatase activity (ortholog); INVOLVED IN protein localization to nucleus (ortholog); Wnt signaling pathway (ortholog); FOUND IN cytosol (ortholog); endosome (ortholog); Wnt signalosome (ortholog) 5 11607446 11615662 + 22301074 116900025 MODEL JAAIVD010000023;XM_032901822 XP_032757713 apical endosomal glycoprotein protein-coding 625848530 LOC116900381 olfactory receptor 5D18-like 5 69610264 69611205 - 22301074;30032202 116900381 MODEL JAAIVD010000023;XM_032902129 XP_032758020 protein-coding 625848533 Dpep1 dipeptidase 1 ENCODES a protein that exhibits beta-lactamase activity (ortholog); dipeptidase activity (ortholog); GPI anchor binding (ortholog); INVOLVED IN antibiotic metabolic process (ortholog); cellular response to calcium ion (ortholog); cellular response to insulin stimulus (ortholog); ASSOCIATED WITH Chemically-Induced Disorders (ortholog); hepatoblastoma (ortholog); osteoarthritis (ortholog); FOUND IN apical part of cell (ortholog); cell junction (ortholog); endoplasmic reticulum membrane (ortholog) 17 42799093 42806711 + 22301074;30032202 116886453 MODEL JAAIVD010000011;XM_032887953 XP_032743844 protein-coding 625848547 Tmem127 transmembrane protein 127 ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN endosome organization (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of TOR signaling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); plasma membrane (ortholog) 5 106027481 106040580 + 30032202 116901932 MODEL JAAIVD010000023;XM_032904155;XM_032904156 XP_032760046;XP_032760047 protein-coding 625848558 LOC116905752 high mobility group protein B1-like 7 77843233 77843869 + 116905752 MODEL JAAIVD010000026 pseudo 625848559 LOC116888291 DDB1- and CUL4-associated factor 12-like protein 1 X 108554754 108556910 - 22301074;30032202 116888291 MODEL JAAIVD010000014;XM_032889565 XP_032745456 protein-coding 625848565 Pygm glycogen phosphorylase, muscle associated ENCODES a protein that exhibits AMP binding (ortholog); carbohydrate binding (ortholog); glycogen phosphorylase activity (ortholog); INVOLVED IN glycogen catabolic process (ortholog); glycogen metabolic process (ortholog); intracellular calcium ion homeostasis (ortholog); PARTICIPATES IN glycogen degradation pathway; ASSOCIATED WITH cholestasis (ortholog); Experimental Diabetes Mellitus (ortholog); genetic disease (ortholog); FOUND IN sarcoplasmic reticulum (ortholog) 2 1284896 1299491 - 22301074;30032202 116890658 MODEL JAAIVD010000001;XM_032891046 XP_032746937 glycogen phosphorylase, muscle form protein-coding 625848589 Arhgef12 Rho guanine nucleotide exchange factor 12 ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); regulation of blood pressure (ortholog); Rho-activating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH glaucoma (ortholog); Weight Gain (ortholog); FOUND IN cytoplasm (ortholog) 8 37558533 37681501 - 22301074;30032202 116907118 MODEL JAAIVD010000027;XM_032910092 XP_032765983 protein-coding 625848634 LOC116895469 40S ribosomal protein S6-like 3 85348169 85348893 + 116895469 MODEL JAAIVD010000012 pseudo 625848635 Hrct1 histidine rich carboxyl terminus 1 1 2768371 2769147 - 116885852 MODEL JAAIVD010000025;XM_032887188 XP_032743079 histidine-rich carboxyl terminus protein 1 protein-coding 625848640 Tbx2 T-box transcription factor 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN aorta morphogenesis (ortholog); apoptotic process (ortholog); atrioventricular canal development (ortholog); ASSOCIATED WITH atrial heart septal defect (ortholog); Conotruncal Cardiac Defects (ortholog); coronary artery disease (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) 9 84902637 84911457 - 22301074;30032202 116908904 MODEL JAAIVD010000002;XM_032912359 XP_032768250 T-box transcription factor TBX2 protein-coding 625848650 LOC116898829 uncharacterized LOC116898829 1 41661761 41673088 - 116898829 MODEL JAAIVD010000025;XR_004387665;XR_004387666 ncrna 625848658 Glt6d1 glycosyltransferase 6 domain containing 1 5 11269920 11278385 + 22301074;30032202 116900085 MODEL JAAIVD010000023;XM_032901867 XP_032757758 putative glycosyltransferase 6 domain-containing protein 1 protein-coding 625848665 Thsd1 thrombospondin type 1 domain containing 1 ENCODES a protein that exhibits extracellular matrix binding (ortholog); INVOLVED IN focal adhesion assembly (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH aortic aneurysm (ortholog); Hydrops Fetalis (ortholog); intracranial berry aneurysm 12 (ortholog); FOUND IN cell periphery (ortholog); cell surface (ortholog); cytoplasm (ortholog) 13 64179257 64215666 - 30032202 116914796 MODEL JAAIVD010000008;XM_032919244;XM_032919245;XM_032919246 XP_032775135;XP_032775136;XP_032775137 thrombospondin type-1 domain-containing protein 1 protein-coding 625848678 Rgs7bp regulator of G protein signaling 7 binding protein INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); regulation of postsynaptic membrane potential (ortholog); PARTICIPATES IN dopamine signaling pathway via D1 family of receptors; dopamine signaling pathway via D2 family of receptors; G protein mediated signaling pathway via Galphai family; FOUND IN axon (ortholog); cytoplasm (ortholog); dendritic shaft (ortholog) 3 192303938 192420453 + 30032202 116897220 MODEL JAAIVD010000012;XM_032898939;XM_032898940;XM_032898941 XP_032754830;XP_032754831;XP_032754832 regulator of G-protein signaling 7-binding protein protein-coding 625848696 Ptpn13 protein tyrosine phosphatase non-receptor type 13 ENCODES a protein that exhibits phosphatidylinositol 3-kinase regulatory subunit binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN cellular response to toxic substance (ortholog); negative regulation of excitatory synapse assembly (ortholog); negative regulation of protein phosphorylation (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH breast cancer (ortholog); colon cancer (ortholog); colorectal cancer (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); lamellipodium (ortholog) 11 13519095 13693416 + 22301074;30032202 116912376 MODEL JAAIVD010000006;XM_032916433 XP_032772324 tyrosine-protein phosphatase non-receptor type 13 protein-coding 625848748 LOC116886427 leptin receptor overlapping transcript-like 1 17 22865141 22866603 - 30032202 116886427 MODEL JAAIVD010000011;XM_032887913 XP_032743804 protein-coding 625848753 LOC116910754 U12 minor spliceosomal RNA 9 78127964 78128114 - 116910754 MODEL JAAIVD010000002;XR_004389265 snrna 625848756 LOC116914109 small nucleolar RNA SNORA32 12 28383885 28384006 - 116914109 MODEL JAAIVD010000007;XR_004389675 snorna 625848759 LOC116891076 uncharacterized LOC116891076 2 29774694 29776255 - 116891076 MODEL JAAIVD010000001;XR_004386810 ncrna 625848764 Junb JunB proto-oncogene, AP-1 transcription factor subunit ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); cellular response to hormone stimulus (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; ASSOCIATED WITH anaplastic large cell lymphoma (ortholog); colon cancer (ortholog); colorectal adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription factor AP-1 complex (ortholog) 17 15311823 15313722 + 30032202 116886037 MODEL JAAIVD010000011;XM_032887333 XP_032743224 transcription factor jun-B protein-coding 625848769 LOC116886858 heterogeneous nuclear ribonucleoprotein A3-like 1 217059710 217060376 + 116886858 MODEL JAAIVD010000025 pseudo 625848770 LOC116900504 olfactory receptor 8K3-like 5 72354720 72355661 + 22301074;30032202 116900504 MODEL JAAIVD010000023;XM_032902240 XP_032758131 protein-coding 625848773 LOC116886726 small nucleolar RNA SNORA2/SNORA34 family 17 43518235 43518364 + 116886726 MODEL JAAIVD010000011 pseudo 625848774 LOC116896670 gametogenetin-like 3 64729280 64736750 + 116896670 MODEL JAAIVD010000012;XM_032898039 XP_032753930 protein-coding 625848780 LOC116905690 acyl-coenzyme A amino acid N-acyltransferase 2 7 57440314 57444430 + 22301074;30032202 116905690 MODEL JAAIVD010000026;XM_032908674 XP_032764565 protein-coding 625848787 LOC116901337 uncharacterized LOC116901337 5 12789531 12790066 - 116901337 MODEL JAAIVD010000023;XR_004387978 ncrna 625848791 Celsr2 cadherin EGF LAG seven-pass G-type receptor 2 INVOLVED IN cerebrospinal fluid secretion (ortholog); cilium assembly (ortholog); cilium movement (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); Developmental Disabilities (ortholog); endometrial hyperplasia (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) 3 49842272 49866622 + 22301074 116896362 MODEL JAAIVD010000012;XM_032897471;XM_032897472;XM_032897473;XM_032897474 XP_032753362;XP_032753363;XP_032753364;XP_032753365 protein-coding 625848836 LOC116897067 60S ribosomal protein L7a-like 3 154940555 154941343 + 116897067 MODEL JAAIVD010000012 pseudo 625848837 Ankrd13d ankyrin repeat domain 13D ENCODES a protein that exhibits ubiquitin-modified protein reader activity (ortholog); INVOLVED IN negative regulation of receptor internalization (ortholog); FOUND IN cytoplasm (ortholog); perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog) 2 3362959 3375076 + 22301074;30032202 116890773 MODEL JAAIVD010000001;XM_032891239 XP_032747130 ankyrin repeat domain-containing protein 13D protein-coding 625848856 LOC116908385 small nucleolar RNA SNORA48 8 30688934 30689066 + 116908385 MODEL JAAIVD010000027 pseudo 625848857 Pcca propionyl-CoA carboxylase subunit alpha ENCODES a protein that exhibits enzyme binding (ortholog); propionyl-CoA carboxylase activity (ortholog); INVOLVED IN succinyl-CoA biosynthetic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); genetic disease (ortholog); pontocerebellar hypoplasia type 2D (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 12 2006261 2310828 - 22301074;30032202 116913625 MODEL JAAIVD010000007;XM_032917889;XM_032917890;XM_032917891 XP_032773780;XP_032773781;XP_032773782 propionyl-CoA carboxylase alpha chain, mitochondrial protein-coding 625848893 LOC116888283 interferon-stimulated 20 kDa exonuclease-like 2 X 23335595 23336684 - 116888283 MODEL JAAIVD010000014 pseudo 625848894 Vsig10 V-set and immunoglobulin domain containing 10 16 36474638 36510656 - 30032202 116885499 MODEL JAAIVD010000004;XM_032886791 XP_032742682 V-set and immunoglobulin domain-containing protein 10 protein-coding 625848907 Znf324 zinc finger protein 324 INVOLVED IN cell population proliferation (ortholog); G1/S transition of mitotic cell cycle (ortholog) 2 174215257 174221117 - 30032202 116892620 MODEL JAAIVD010000001;XM_032894426;XM_032894427 XP_032750317;XP_032750318 zinc finger protein 324A protein-coding 625848919 LOC116888130 60S ribosomal protein L15-like X 105514511 105517481 + 116888130 MODEL JAAIVD010000014 pseudo 625848920 LOC116893759 tektin-5-like 2 29037861 29039322 - 30032202 116893759 MODEL JAAIVD010000001;XM_032895462 XP_032751353 protein-coding 625848925 Pik3c2g phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma ENCODES a protein that exhibits 1-phosphatidylinositol 4-kinase activity (ortholog); 1-phosphatidylinositol-3-kinase activity (ortholog); 1-phosphatidylinositol-4-phosphate 3-kinase activity (ortholog); INVOLVED IN chemotaxis (ortholog); phosphatidylinositol-3-phosphate biosynthetic process (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); esophageal atresia/tracheoesophageal fistula (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN membrane (ortholog); nuclear envelope (ortholog) 6 9599769 9895190 - 22301074;30032202 116904527 MODEL JAAIVD010000024;XM_032907317;XM_032907318;XM_032907319 XP_032763208;XP_032763209;XP_032763210 phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit gamma protein-coding 625848969 LOC116911511 olfactory receptor 10J1-like 10 52231139 52232070 - 22301074 116911511 MODEL JAAIVD010000005;XM_032915500 XP_032771391 protein-coding 625848972 LOC116883450 putative olfactory receptor 2W6 14 41279080 41280027 - 22301074 116883450 MODEL JAAIVD010000009;XM_032884596 XP_032740487 protein-coding 625848976 Srsf9 serine and arginine rich splicing factor 9 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN negative regulation of mRNA splicing, via spliceosome (ortholog); response to alkaloid (ortholog); response to toxic substance (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Experimental Autoimmune Encephalomyelitis (ortholog); human immunodeficiency virus infectious disease (ortholog); urinary bladder cancer (ortholog); FOUND IN nucleoplasm (ortholog) 16 38489549 38495673 - 30032202 116885967 MODEL JAAIVD010000004;XM_032887302;XM_032887303 XP_032743193;XP_032743194 serine/arginine-rich splicing factor 9 protein-coding 625848986 Chmp4c charged multivesicular body protein 4C ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); late endosome to lysosome transport (ortholog); ASSOCIATED WITH Ovarian Neoplasms (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); Flemming body (ortholog) 3 144415334 144442628 + 30032202 116897037 MODEL JAAIVD010000012;XM_032898658 XP_032754549 protein-coding 625848995 Awat1 acyl-CoA wax alcohol acyltransferase 1 ENCODES a protein that exhibits long-chain-alcohol O-fatty-acyltransferase activity (ortholog); PARTICIPATES IN retinol metabolic pathway; vitamin A deficiency pathway X 58321199 58327277 + 30032202 116888252 MODEL JAAIVD010000014;XM_032889535 XP_032745426 protein-coding 625849006 LOC116906066 N-alpha-acetyltransferase 10-like 7 54093072 54093601 + 116906066 MODEL JAAIVD010000026 pseudo 625849007 Matn2 matrilin 2 INVOLVED IN axon guidance (ortholog); dendrite regeneration (ortholog); glial cell migration (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); matrilin complex (ortholog) 1 207998810 208136952 + 22301074 116910461 MODEL JAAIVD010000025;XM_032914335 XP_032770226 matrilin-2 protein-coding 625849030 Mael maelstrom spermatogenic transposon silencer INVOLVED IN cell morphogenesis (ortholog); DNA damage response (ortholog); fertilization (ortholog); ASSOCIATED WITH male infertility (ortholog); FOUND IN autosome (ortholog); chromatin (ortholog); chromatoid body (ortholog) 10 45297232 45336669 - 22301074;30032202 116911160 MODEL JAAIVD010000005;XM_032915021;XM_032915022 XP_032770912;XP_032770913 protein maelstrom homolog protein-coding 625849050 Pde2a phosphodiesterase 2A ENCODES a protein that exhibits 3',5'-cGMP-stimulated cyclic-nucleotide phosphodiesterase activity (ortholog); 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); 3',5'-cyclic-GMP phosphodiesterase activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); aorta development (ortholog); cAMP catabolic process (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Neoplasms (ortholog); cardiomyopathy (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 99730216 99822123 + 30032202 116891760 MODEL JAAIVD010000001;XM_032893083;XM_032893084;XM_032893085;XM_032893086 XP_032748974;XP_032748975;XP_032748976;XP_032748977 cGMP-dependent 3',5'-cyclic phosphodiesterase protein-coding 625849096 Kiaa0825 KIAA0825 ortholog ASSOCIATED WITH Postaxial Polydactyly (ortholog); Postaxial Polydactyly, Type A1 (ortholog); Postaxial Polydactyly, Type A10 (ortholog) 3 217873504 218256517 - 116897343 MODEL JAAIVD010000012;XM_032899100 XP_032754991 uncharacterized protein KIAA0825 homolog protein-coding 625849117 Mkln1 muskelin 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell-matrix adhesion (ortholog); neurotransmitter receptor transport postsynaptic membrane to endosome (ortholog); ASSOCIATED WITH acrodermatitis (ortholog); Lung Injury (ortholog); pulmonary fibrosis (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 6 108085157 108234117 - 22301074;30032202 116903992 MODEL JAAIVD010000024;XM_032906798;XM_032906799;XM_032906800 XP_032762689;XP_032762690;XP_032762691 muskelin protein-coding 625849145 Kprp keratinocyte proline rich protein INVOLVED IN desmosome organization (ortholog); epidermis development (ortholog); establishment of skin barrier (ortholog); ASSOCIATED WITH prostate cancer (ortholog) 3 120182822 120187124 - 116895524 MODEL JAAIVD010000012;XM_032896768;XM_032896769 XP_032752659;XP_032752660 keratinocyte proline-rich protein protein-coding 625849154 LOC116909317 brain-specific serine protease 4 ENCODES a protein that exhibits hydrolase activity (inferred); peptidase activity (inferred); serine-type endopeptidase activity (inferred); INVOLVED IN proteolysis (inferred) 9 1292335 1297534 - 22301074;9722524 116909317 O88781 MODEL AJ005642;JAAIVD010000002;XM_032912852 CAA06644;XP_032768743 bsp2 serine protease protein-coding 625849164 Dnajb4 DnaJ heat shock protein family (Hsp40) member B4 ENCODES a protein that exhibits ATPase activator activity (ortholog); protein-folding chaperone binding (ortholog); ASSOCIATED WITH congenital myopathy 21 (ortholog); distal myopathy (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 3 9402503 9430857 + 22301074;30032202 116896159 MODEL JAAIVD010000012;XM_032897150;XM_032897151;XM_032897152 XP_032753041;XP_032753042;XP_032753043 dnaJ homolog subfamily B member 4 protein-coding 625849178 Naalad2 N-acetylated alpha-linked acidic dipeptidase 2 ENCODES a protein that exhibits carboxypeptidase activity (ortholog); N-formylglutamate deformylase activity (ortholog); peptidase activity (ortholog); INVOLVED IN proteolysis (ortholog); FOUND IN membrane (ortholog) 8 14077948 14146428 - 30032202 116906857 MODEL JAAIVD010000027;XM_032909755 XP_032765646 N-acetylated-alpha-linked acidic dipeptidase 2 protein-coding 625849204 Pla2g6 phospholipase A2 group VI ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); ATP-dependent protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN antibacterial humoral response (ortholog); cardiolipin acyl-chain remodeling (ortholog); maternal process involved in female pregnancy (ortholog); PARTICIPATES IN angiotensin II signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); Binge Drinking (ortholog); cerebellar hypoplasia (ortholog); FOUND IN extracellular region (ortholog); mitochondrion (ortholog); plasma membrane (ortholog) 1 262937882 262946092 - 22301074;30032202 116890219 MODEL JAAIVD010000025;XM_032890956 XP_032746847 85/88 kDa calcium-independent phospholipase A2 protein-coding 625849215 Angptl6 angiopoietin like 6 ASSOCIATED WITH COVID-19 (ortholog); gestational diabetes (ortholog); hepatocellular carcinoma (ortholog); FOUND IN secretory granule (ortholog) 8 17141956 17147953 - 30032202 116907093 MODEL JAAIVD010000027;XM_032910059;XM_032910060;XR_004388804 XP_032765950;XP_032765951 angiopoietin-related protein 6 protein-coding 625849230 Nkx6-3 NK6 homeobox 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cell fate determination (ortholog); glandular epithelial cell differentiation (ortholog); negative regulation of epithelial cell differentiation (ortholog) 13 63267425 63272565 - 22301074;30032202 116914738 MODEL JAAIVD010000008;XM_032919174 XP_032775065 homeobox protein Nkx-6.3 protein-coding 625849237 LOC116908242 40S ribosomal protein S24-like 8 84782246 84787033 - 116908242 MODEL JAAIVD010000027 pseudo 625849238 LOC116906937 platelet-activating factor acetylhydrolase IB subunit beta-like 8 77373367 77374194 + 116906937 MODEL JAAIVD010000027 pseudo 625849239 Rbbp9 RB binding protein 9, serine hydrolase ENCODES a protein that exhibits serine hydrolase activity (ortholog); INVOLVED IN positive regulation of gene expression (ortholog); regulation of cell population proliferation (ortholog); response to nematode (ortholog); FOUND IN nucleoplasm (ortholog) 5 124188119 124194352 - 22301074 116902048 MODEL JAAIVD010000023;XM_032904334 XP_032760225 serine hydrolase RBBP9 protein-coding 625849248 Ncbp3 nuclear cap binding subunit 3 ENCODES a protein that exhibits mRNA binding (ortholog); RNA 7-methylguanosine cap binding (ortholog); RNA cap binding (ortholog); INVOLVED IN defense response to virus (ortholog); mRNA export from nucleus (ortholog); snRNA export from nucleus (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 9 42432147 42462233 - 22301074;30032202 116909763 MODEL JAAIVD010000002;XM_032913449 XP_032769340 nuclear cap-binding protein subunit 3 protein-coding 625849265 Msh6 mutS homolog 6 ENCODES a protein that exhibits ADP binding (ortholog); ATP binding (ortholog); ATP-dependent activity, acting on DNA (ortholog); INVOLVED IN determination of adult lifespan (ortholog); DNA repair (ortholog); intrinsic apoptotic signaling pathway (ortholog); PARTICIPATES IN altered mismatch repair pathway; colorectal cancer pathway; endometrial cancer pathway; ASSOCIATED WITH ataxia telangiectasia (ortholog); B-lymphoblastic leukemia/lymphoma with BCR-ABL1 (ortholog); bilateral breast cancer (ortholog); FOUND IN chromatin (ortholog); MutSalpha complex (ortholog); nucleoplasm (ortholog) 7 5010975 5027614 - 22301074;30032202 116905742 MODEL JAAIVD010000026;XM_032908709 XP_032764600 DNA mismatch repair protein Msh6 protein-coding 625849279 Matr3 matrin 3 ENCODES a protein that exhibits identical protein binding (ortholog); miRNA binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); blastocyst formation (ortholog); heart valve development (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 21 (ortholog); distal myopathy (ortholog); FOUND IN nuclear matrix (ortholog); nucleus (ortholog) 15 8777040 8805189 - 22301074;30032202 116884965 MODEL JAAIVD010000010;XM_032886170;XM_032886171;XM_032886172;XM_032886173 XP_032742061;XP_032742062;XP_032742063;XP_032742064 matrin-3 protein-coding 625849306 LOC116907901 40S ribosomal protein S21-like 1 158254994 158258870 + 116907901 MODEL JAAIVD010000025 pseudo 625849307 Ube3a ubiquitin protein ligase E3A ENCODES a protein that exhibits transcription coactivator activity (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); cellular response to brain-derived neurotrophic factor stimulus (ortholog); Golgi lumen acidification (ortholog); ASSOCIATED WITH Angelman syndrome (ortholog); autistic disorder (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); nucleus (ortholog) 2 140190254 140280280 + 22301074;30032202 116892034 MODEL JAAIVD010000001;XM_032893490;XM_032893491;XM_032893492;XM_032893493;XM_032893494;XR_004386906 XP_032749381;XP_032749382;XP_032749383;XP_032749384;XP_032749385 ubiquitin-protein ligase E3A protein-coding 625849339 LOC116890433 U7 small nuclear RNA 1 63381148 63381211 - 116890433 MODEL JAAIVD010000025;XR_004386631 snrna 625849342 Pinx1 PIN2 (TERF1) interacting telomerase inhibitor 1 ENCODES a protein that exhibits protein-containing complex binding (ortholog); telomerase inhibitor activity (ortholog); telomerase RNA binding (ortholog); INVOLVED IN mitotic metaphase chromosome alignment (ortholog); negative regulation of G2/M transition of mitotic cell cycle (ortholog); negative regulation of protein ubiquitination (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN chromosome, telomeric region (ortholog); kinetochore (ortholog); nuclear chromosome (ortholog) 12 60486456 60544879 - 22301074;30032202 116914038 MODEL JAAIVD010000007;XM_032918318 XP_032774209 PIN2/TERF1-interacting telomerase inhibitor 1 protein-coding 625849353 Cd109 CD109 molecule INVOLVED IN hair follicle development (ortholog); negative regulation of keratinocyte proliferation (ortholog); negative regulation of protein phosphorylation (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Colorectal Neoplasms (ortholog); High Myopia (ortholog); FOUND IN plasma membrane (ortholog) 8 72871786 72979922 + 22301074;30032202 116907960 MODEL JAAIVD010000027;XM_032911187 XP_032767078 CD109 antigen protein-coding 625849390 LOC116894602 vomeronasal type-1 receptor 2-like 2 181844681 181845575 - 116894602 MODEL JAAIVD010000001 pseudo 625849391 LOC116893907 uncharacterized LOC116893907 2 75591760 75592871 + 116893907 MODEL JAAIVD010000001;XR_004387011 ncrna 625849396 Glce glucuronic acid epimerase ENCODES a protein that exhibits calcium ion binding (ortholog); heparosan-N-sulfate-glucuronate 5-epimerase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN heparan sulfate proteoglycan biosynthetic process (ortholog); heparin proteoglycan biosynthetic process (ortholog); negative regulation of cell projection organization (ortholog); ASSOCIATED WITH cerebrovascular disease (ortholog); hypertension (ortholog); FOUND IN Golgi apparatus (ortholog) 8 56365608 56435991 - 30032202 116906616 MODEL JAAIVD010000027;XM_032909374 XP_032765265 D-glucuronyl C5-epimerase protein-coding 625849405 LOC116914287 uncharacterized LOC116914287 13 42179527 42245748 - 116914287 MODEL JAAIVD010000008;XR_004389742 ncrna 625849410 Pbx2 PBX homeobox 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN embryonic limb morphogenesis (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); proximal/distal pattern formation (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) 18 7275352 7280481 + 22301074;30032202 116886826 MODEL JAAIVD010000013;XM_032888258 XP_032744149 pre-B-cell leukemia transcription factor 2 protein-coding 625849423 LOC116889840 DNA polymerase I-like 22301074;30032202 116889840 MODEL JAAIVD010001803;XM_032890673 XP_032746564 protein-coding 625849424 Ndufb9 NADH:ubiquinone oxidoreductase subunit B9 ASSOCIATED WITH mitochondrial complex I deficiency (ortholog); nuclear type mitochondrial complex I deficiency 24 (ortholog); Weight Gain (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) 1 233459498 233465965 + 30032202 116911850 MODEL JAAIVD010000025;XM_032915805 XP_032771696 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 protein-coding 625849432 Ano6 anoctamin 6 ENCODES a protein that exhibits calcium-activated cation channel activity (ortholog); identical protein binding (ortholog); intracellularly calcium-gated chloride channel activity (ortholog); INVOLVED IN activation of blood coagulation via clotting cascade (ortholog); bleb assembly (ortholog); blood coagulation (ortholog); ASSOCIATED WITH ankylosing spondylitis (ortholog); Congenital Hydrocephalus 2, with or without Brain or Eye Anomalies (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN chloride channel complex (ortholog); cholinergic synapse (ortholog); plasma membrane (ortholog) 1 268613213 268793707 + 22301074;30032202 116884372 MODEL JAAIVD010000025;XM_032885493;XM_032885496;XM_032885498;XM_032885502 XP_032741384;XP_032741387;XP_032741389;XP_032741393 anoctamin-6 protein-coding 625849466 LOC116898612 rRNA-processing protein FCF1 homolog 4 1507101 1507776 - 116898612 MODEL JAAIVD010000003 pseudo 625849467 Rxfp1 relaxin family peptide receptor 1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); hormone binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); cell differentiation (ortholog); ASSOCIATED WITH endometriosis (ortholog) 3 73645875 73766849 + 22301074 116896759 MODEL JAAIVD010000012;XM_032898205;XM_032898206;XM_032898207 XP_032754096;XP_032754097;XP_032754098 relaxin receptor 1 protein-coding 625849494 LOC116908186 thrombospondin type-1 domain-containing protein 4-like 8 53830484 53856547 - 30032202 116908186 MODEL JAAIVD010000027;XM_032911473 XP_032767364 protein-coding 625849502 C1galt1c1 C1GALT1 specific chaperone 1 ENCODES a protein that exhibits N-acetylgalactosaminide beta-1,3-galactosyltransferase activity (ortholog); INVOLVED IN platelet activation (ortholog); platelet morphogenesis (ortholog); protein O-linked glycosylation (ortholog); ASSOCIATED WITH atypical hemolytic-uremic syndrome (ortholog); congenital disorder of glycosylation (ortholog); HEMOLYTIC UREMIC SYNDROME, ATYPICAL, 8, WITH RHIZOMELIC SHORT STATURE (ortholog) X 101750834 101756060 + 30032202 116888807 MODEL JAAIVD010000014;XM_032890086;XM_032890087 XP_032745977;XP_032745978 C1GALT1-specific chaperone 1 protein-coding 625849513 LOC116888177 eukaryotic translation initiation factor 5-like X 117886945 117888325 + 30032202 116888177 MODEL JAAIVD010000014;XM_032889497 XP_032745388 protein-coding 625849517 LOC116912233 sulfotransferase 1 family member D1 11 1328185 1361325 + 22301074;30032202 116912233 MODEL JAAIVD010000006;XM_032916208 XP_032772099 protein-coding 625849529 LOC116889624 ribosome biogenesis regulatory protein homolog Y 1413058 1418304 + 116889624 MODEL JAAIVD010000015 pseudo 625849530 LOC116884597 40S ribosomal protein S23-like 15 40334124 40335278 + 116884597 MODEL JAAIVD010000010 pseudo 625849531 Spata2 spermatogenesis associated 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog); signaling receptor complex adaptor activity (ortholog); ubiquitin-specific protease binding (ortholog); INVOLVED IN protein K63-linked deubiquitination (ortholog); protein linear deubiquitination (ortholog); regulation of inflammatory response (ortholog); FOUND IN cytoplasm (ortholog) 5 150500774 150508788 + 30032202 116902311 MODEL JAAIVD010000023;XM_032904756 XP_032760647 spermatogenesis-associated protein 2 protein-coding 625849537 LOC116890461 small nucleolar RNA SNORD104 1 22665753 22665822 + 116890461 MODEL JAAIVD010000025;XR_004386653 snorna 625849540 Rfc1 replication factor C subunit 1 ENCODES a protein that exhibits DNA clamp unloader activity (ortholog); DNA-binding transcription factor binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN DNA-templated DNA replication (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN FasL mediated signaling pathway; mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH Bilateral Vestibulopathy (ortholog); cerebellar ataxia (ortholog); cerebellar ataxia, neuropathy, and vestibular areflexia syndrome (ortholog); FOUND IN DNA replication factor C complex (ortholog); Elg1 RFC-like complex (ortholog); nucleoplasm (ortholog) 11 22279164 22352880 - 22301074;30032202 116912211 MODEL JAAIVD010000006;XM_032916158;XM_032916159;XM_032916160;XM_032916161 XP_032772049;XP_032772050;XP_032772051;XP_032772052 protein-coding 625849574 Irs1 insulin receptor substrate 1 ENCODES a protein that exhibits insulin receptor binding (ortholog); insulin-like growth factor receptor binding (ortholog); phosphatidylinositol 3-kinase activator activity (ortholog); INVOLVED IN cellular response to angiotensin (ortholog); cellular response to brain-derived neurotrophic factor stimulus (ortholog); cellular response to fatty acid (ortholog); PARTICIPATES IN insulin signaling pathway; insulin-like growth factor signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH AIDS Dementia Complex (ortholog); Alzheimer's disease (ortholog); coronary artery disease (ortholog); FOUND IN caveola (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) 4 155129339 155184611 - 30032202 116899561 MODEL JAAIVD010000003;XM_032901457 XP_032757348 protein-coding 625849580 LOC116912565 uncharacterized LOC116912565 11 10638077 10639964 - 116912565 MODEL JAAIVD010000006;XR_004389468 ncrna 625849584 Arx aristaless related homeobox ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN axon guidance (ortholog); cell proliferation in forebrain (ortholog); cerebral cortex GABAergic interneuron migration (ortholog); ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); Aicardi syndrome (ortholog); autistic disorder (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) 7 113217391 113229272 - 22301074;30032202 116905353 MODEL JAAIVD010000026;XM_032908268 XP_032764159 homeobox protein ARX protein-coding 625849593 LOC116913897 cytochrome b-c1 complex subunit 9-like 12 22958141 22958525 + 22301074;30032202 116913897 MODEL JAAIVD010000007;XM_032918180 XP_032774071 protein-coding 625849597 Slc12a3 solute carrier family 12 member 3 ENCODES a protein that exhibits enzyme binding (ortholog); protein serine/threonine kinase binding (ortholog); sodium ion transmembrane transporter activity (ortholog); INVOLVED IN chloride transport (ortholog); renal sodium ion absorption (ortholog); response to aldosterone (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH aortic disease (ortholog); Bartter disease (ortholog); essential hypertension (ortholog); FOUND IN apical plasma membrane (ortholog); cytosol (ortholog); extracellular exosome (ortholog) 17 1236697 1272974 + 22301074;30032202 116886442 MODEL JAAIVD010000011;XM_032887934 XP_032743825 protein-coding 625849626 LOC116899824 small nucleolar RNA SNORA43 4 150370879 150371008 + 116899824 MODEL JAAIVD010000003;XR_004387824 snorna 625849629 Trnas-aga transfer RNA serine (anticodon AGA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 7 38164973 38165054 - 116906526 MODEL JAAIVD010000026 trna 625849630 LOC116890073 olfactory receptor 9K2-like 1 215025684 215026679 - 22301074;30032202 116890073 MODEL JAAIVD010000025;XM_032890836 XP_032746727 protein-coding 625849634 LOC116907015 C-C chemokine receptor type 1 8 115025981 115031536 - 22301074;30032202 116907015 MODEL JAAIVD010000027;XM_032909949 XP_032765840 protein-coding 625849640 LOC116910929 vomeronasal type-1 receptor 51-like 10 60479441 60491921 - 116910929 MODEL JAAIVD010000005 pseudo 625849641 LOC116886748 small nucleolar RNA SNORD71 17 29550585 29550668 + 116886748 MODEL JAAIVD010000011;XR_004386151 snorna 625849644 LOC116883995 NSFL1 cofactor p47-like 14 27561909 27563031 + 116883995 MODEL JAAIVD010000009 pseudo 625849645 Coasy Coenzyme A synthase ENCODES a protein that exhibits dephospho-CoA kinase activity (ortholog); pantetheine-phosphate adenylyltransferase activity (ortholog); INVOLVED IN coenzyme A biosynthetic process (ortholog); PARTICIPATES IN pantothenic acid metabolic pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness 3 (ortholog); mucopolysaccharidosis III (ortholog); Myopathy with Abnormal Lipid Metabolism (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); mitochondrial outer membrane (ortholog) 9 60377139 60381193 + 22301074;30032202 116908877 MODEL JAAIVD010000002;XM_032912322 XP_032768213 bifunctional coenzyme A synthase protein-coding 625849659 Bhlhe40 basic helix-loop-helix family member e40 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); entrainment of circadian clock by photoperiod (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH advanced sleep phase syndrome (ortholog); bipolar disorder (ortholog); COVID-19 (ortholog); FOUND IN nuclear body (ortholog); nucleus (ortholog) 6 38132293 38138492 - 22301074;30032202 116903439 MODEL JAAIVD010000024;XM_032905992 XP_032761883 class E basic helix-loop-helix protein 40 protein-coding 625849668 Srcin1 SRC kinase signaling inhibitor 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein kinase binding (ortholog); INVOLVED IN behavioral response to cocaine (ortholog); conditioned place preference (ortholog); negative regulation of cell adhesion (ortholog); ASSOCIATED WITH cocaine dependence (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN actin cytoskeleton (ortholog); axon (ortholog); cytoplasm (ortholog) 9 56810422 56872647 + 30032202 116908748 MODEL JAAIVD010000002;XM_032912101 XP_032767992 protein-coding 625849692 LOC116906075 Ig heavy chain V region 108A-like 7 62731592 62732100 - 116906075 MODEL JAAIVD010000026 pseudo 625849693 Atp13a4 ATPase 13A4 INVOLVED IN intracellular calcium ion homeostasis (ortholog); ASSOCIATED WITH congenital myopathy 1A (ortholog); FOUND IN early endosome membrane (ortholog); endoplasmic reticulum membrane (ortholog); late endosome membrane (ortholog) 4 14297726 14434361 - 22301074;30032202 116897842 MODEL JAAIVD010000003;XM_032899257 XP_032755148 probable cation-transporting ATPase 13A4 protein-coding 625849727 Cttnbp2 cortactin binding protein 2 ENCODES a protein that exhibits SH3 domain binding (ortholog); INVOLVED IN regulation of modification of postsynaptic actin cytoskeleton (ortholog); regulation of synapse organization (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Myocardial Ischemia (ortholog); prostate cancer (ortholog); FOUND IN dendritic spine (ortholog); FAR/SIN/STRIPAK complex (ortholog); glutamatergic synapse (ortholog) 6 120190256 120348485 - 22301074;30032202 116904053 MODEL JAAIVD010000024;XM_032906912 XP_032762803 cortactin-binding protein 2 protein-coding 625849754 Eef2 eukaryotic translation elongation factor 2 ENCODES a protein that exhibits 5S rRNA binding (ortholog); actin filament binding (ortholog); GTPase activity (ortholog); INVOLVED IN cellular response to brain-derived neurotrophic factor stimulus (ortholog); glial cell proliferation (ortholog); hematopoietic progenitor cell differentiation (ortholog); PARTICIPATES IN mTOR signaling pathway; translation elongation pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Alzheimer's disease (ortholog); brain glioblastoma multiforme (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) 1 153706645 153712126 - 22301074;30032202 116904541 MODEL JAAIVD010000025;XM_032907338 XP_032763229 elongation factor 2 protein-coding 625849769 Slc4a9 solute carrier family 4 member 9 ENCODES a protein that exhibits chloride:bicarbonate antiporter activity (ortholog); sodium,bicarbonate:chloride antiporter activity (ortholog); sodium:bicarbonate symporter activity (ortholog); INVOLVED IN monoatomic anion transport (ortholog); saliva secretion (ortholog); sodium ion transmembrane transport (ortholog); FOUND IN apical part of cell (ortholog); basolateral plasma membrane (ortholog); membrane (ortholog) 15 7839642 7855574 - 22301074;30032202 116884496 MODEL JAAIVD010000010;XM_032885619;XM_032885620;XM_032885621;XM_032885622;XM_032885623;XM_032885624 XP_032741510;XP_032741511;XP_032741512;XP_032741513;XP_032741514;XP_032741515 anion exchange protein 4 protein-coding 625849806 Alcam activated leukocyte cell adhesion molecule ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN axon guidance (ortholog); heterophilic cell-cell adhesion (ortholog); motor neuron axon guidance (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); basal cell carcinoma (ortholog); carcinoma (ortholog); FOUND IN axon (ortholog); external side of plasma membrane (ortholog); immunological synapse (ortholog) 4 36516752 36710837 - 30032202 116898892 MODEL JAAIVD010000003;XM_032900289;XM_032900290 XP_032756180;XP_032756181 CD166 antigen protein-coding 625849829 Pde3a phosphodiesterase 3A ENCODES a protein that exhibits 3',5'-cGMP-inhibited cyclic-nucleotide phosphodiesterase activity (ortholog); 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); 3',5'-cyclic-GMP phosphodiesterase activity (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); cellular response to cGMP (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); genetic disease (ortholog); hypertension and brachydactyly syndrome (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) 6 8075290 8341783 - 30032202 116903135 MODEL JAAIVD010000024;XM_032905490 XP_032761381 cGMP-inhibited 3',5'-cyclic phosphodiesterase A protein-coding 625849849 LOC116894002 olfactory receptor 51Q1-like 2 101622788 101623753 - 22301074 116894002 MODEL JAAIVD010000001;XM_032895718 XP_032751609 protein-coding 625849852 Tinag tubulointerstitial nephritis antigen INVOLVED IN cell adhesion (ortholog); ASSOCIATED WITH Diabetic Nephropathies (ortholog); FOUND IN basement membrane (ortholog) 8 71217446 71303425 - 22301074;30032202 116907734 MODEL JAAIVD010000027;XM_032910861 XP_032766752 protein-coding 625849867 LOC116905020 Ig heavy chain V region 102-like 7 62640115 62640568 + 116905020 MODEL JAAIVD010000026 pseudo 625849868 Ikzf2 IKAROS family zinc finger 2 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN cochlear outer hair cell electromotile response (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); adult T-cell leukemia/lymphoma (ortholog); COVID-19 (ortholog); FOUND IN nucleus (ortholog) 4 143297280 143434990 - 30032202 116899473 MODEL JAAIVD010000003;XM_032901295 XP_032757186 zinc finger protein Helios protein-coding 625849880 Hsbp1l1 heat shock factor binding protein 1 like 1 15 51990486 51996342 + 22301074;30032202 116884607 MODEL JAAIVD010000010;XM_032885748 XP_032741639 heat shock factor-binding protein 1-like protein 1 protein-coding 625849889 LOC116907571 placenta-expressed transcript 1 protein 8 44964517 44976376 + 30032202 116907571 MODEL JAAIVD010000027;XM_032910603 XP_032766494 protein-coding 625849897 Spink5 serine peptidase inhibitor Kazal type 5 ENCODES a protein that exhibits peptidase inhibitor activity (ortholog); serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN epidermal cell differentiation (ortholog); negative regulation of antibacterial peptide biosynthetic process (ortholog); negative regulation of antibacterial peptide production (ortholog); ASSOCIATED WITH aspirin-induced respiratory disease (ortholog); atopic dermatitis (ortholog); centrilobular emphysema (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 3 121162 181554 + 22301074 116895250 MODEL JAAIVD010000012;XM_032896569 XP_032752460 serine protease inhibitor Kazal-type 5 protein-coding 625849933 Nsun2 NOP2/Sun RNA methyltransferase 2 ENCODES a protein that exhibits mRNA (cytidine-5-)-methyltransferase activity (ortholog); tRNA (cytidine-N5)-methyltransferase activity (ortholog); INVOLVED IN hair follicle maturation (ortholog); in utero embryonic development (ortholog); meiotic cell cycle checkpoint signaling (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal recessive intellectual developmental disorder 5 (ortholog); genetic disease (ortholog); FOUND IN chromatoid body (ortholog); cytoplasm (ortholog); extracellular exosome (ortholog) 2 201028829 201050661 + 22301074;30032202 116892907 MODEL JAAIVD010000001;XM_032894827;XM_032894828 XP_032750718;XP_032750719 RNA cytosine C(5)-methyltransferase NSUN2 protein-coding 625849957 LOC116887354 ubiquinol-cytochrome-c reductase complex assembly factor 2 INVOLVED IN mitochondrial respiratory chain complex III assembly (ortholog); positive regulation of mitochondrial translation (ortholog); regulation of insulin secretion (ortholog); ASSOCIATED WITH mitochondrial complex III deficiency nuclear type 1 (ortholog); mitochondrial complex III deficiency nuclear type 7 (ortholog); FOUND IN Cbp3p-Cbp6 complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog) 18 6675724 6687561 + 22301074;30032202 116887354 MODEL JAAIVD010000013;XM_032888948 XP_032744839 protein-coding 625849965 Paxx PAXX non-homologous end joining factor ENCODES a protein that exhibits DNA polymerase binding (ortholog); identical protein binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN DNA damage response (ortholog); double-strand break repair via nonhomologous end joining (ortholog); ASSOCIATED WITH epilepsy (ortholog); FOUND IN Ku70:Ku80 complex (ortholog); nonhomologous end joining complex (ortholog); nucleoplasm (ortholog) 5 11721526 11723706 + 22301074;30032202 116901298 MODEL JAAIVD010000023;XM_032903096 XP_032758987 protein PAXX protein-coding 625849976 Nfil3 nuclear factor, interleukin 3 regulated ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to interleukin-4 (ortholog); natural killer cell differentiation (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH advanced sleep phase syndrome (ortholog); inflammatory bowel disease (ortholog); severe acute respiratory syndrome (ortholog) 14 71275429 71288833 - 22301074;30032202 116883675 MODEL JAAIVD010000009;XM_032884883;XM_032884884;XM_032884885 XP_032740774;XP_032740775;XP_032740776 nuclear factor interleukin-3-regulated protein protein-coding 625849988 LOC116884636 60S ribosomal protein L32-like 15 43421403 43422698 + 116884636 MODEL JAAIVD010000010 pseudo 625849989 Ttc4 tetratricopeptide repeat domain 4 INVOLVED IN defense response to virus (ortholog); innate immune response (ortholog); FOUND IN cytoplasm (ortholog); intermediate filament cytoskeleton (ortholog); nucleus (ortholog) 1 48127644 48143803 + 22301074 116899379 MODEL JAAIVD010000025;XM_032901099 XP_032756990 tetratricopeptide repeat protein 4 protein-coding 625850003 LOC116893443 leukocyte immunoglobulin-like receptor subfamily B member 3 2 176772075 176774243 + 116893443 MODEL JAAIVD010000001;XM_032895210 XP_032751101 protein-coding 625850010 LOC116894663 trace amine-associated receptor 2 2 209997818 210001778 + 22301074;30032202 116894663 MODEL JAAIVD010000001;XM_032896366 XP_032752257 protein-coding 625850014 Eif5a eukaryotic translation initiation factor 5A ENCODES a protein that exhibits RNA binding (ortholog); U6 snRNA binding (ortholog); INVOLVED IN cellular response to thyroid hormone stimulus (ortholog); cellular response to virus (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN annulate lamellae (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 49526286 49530815 - 22301074;30032202 116908506 MODEL JAAIVD010000002;XM_032911678;XM_032911679;XM_032911680 XP_032767569;XP_032767570;XP_032767571 eukaryotic translation initiation factor 5A-1 protein-coding 625850033 LOC116902531 U1 spliceosomal RNA 5 134810397 134810560 - 116902531 MODEL JAAIVD010000023;XR_004388135 snrna 625850036 LOC116904335 syntaxin-binding protein 3-like 6 67791673 67834406 - 116904335 MODEL JAAIVD010000024 pseudo 625850037 Akap11 A-kinase anchoring protein 11 ENCODES a protein that exhibits kinase regulator activity (ortholog); protein kinase A catalytic subunit binding (ortholog); protein kinase A regulatory subunit binding (ortholog); INVOLVED IN cortical actin cytoskeleton organization (ortholog); intracellular protein localization (ortholog); positive regulation of establishment of endothelial barrier (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH bipolar disorder (ortholog); Mouth Neoplasms (ortholog); schizophrenia (ortholog); FOUND IN cytosol (ortholog); peroxisome (ortholog); protein-containing complex (ortholog) 12 45761415 45804472 + 30032202 116913910 MODEL JAAIVD010000007;XM_032918185;XM_032918187 XP_032774076;XP_032774078 A-kinase anchor protein 11 protein-coding 625850056 LOC116910311 ganglioside-induced differentiation-associated protein 1-like 9 50724049 50728307 - 116910311 MODEL JAAIVD010000002 pseudo 625850057 Muc7 mucin 7, secreted INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); ASSOCIATED WITH asthma (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) 11 1878321 1879285 + 116912641 MODEL JAAIVD010000006;XM_032916760 XP_032772651 mucin-7 protein-coding 625850060 LOC116885066 small nucleolar RNA SNORA17 15 45226782 45226913 - 116885066 MODEL JAAIVD010000010;XR_004385942 snorna 625850063 Znf274 zinc finger protein 274 ENCODES a protein that exhibits chromatin binding (ortholog); neurotrophin p75 receptor binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); neuron apoptotic process (ortholog); regulation of JNK cascade (ortholog); ASSOCIATED WITH Nerve Degeneration (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 2 174337546 174352493 - 30032202 116892616 MODEL JAAIVD010000001;XM_032894421;XM_032894422;XM_032894423 XP_032750312;XP_032750313;XP_032750314 neurotrophin receptor-interacting factor homolog protein-coding 625850081 LOC116912249 60S ribosomal protein L17-like 11 18884812 18885440 - 22301074;30032202 116912249 MODEL JAAIVD010000006;XM_032916232 XP_032772123 protein-coding 625850086 C2H2orf78 chromosome 2 C2orf78 homolog 2 156478038 156483402 + 116893342 MODEL JAAIVD010000001;XM_032895152 XP_032751043 uncharacterized protein C2orf78 homolog protein-coding 625850091 LOC116888945 ribosome biogenesis protein NSA2 homolog X 16955980 16956770 - 116888945 MODEL JAAIVD010000014 pseudo 625850092 LOC116907178 protein NDRG2-like 8 889449 890688 - 30032202 116907178 MODEL JAAIVD010000027;XM_032910137 XP_032766028 protein-coding 625850099 LOC116895875 uncharacterized LOC116895875 3 106045122 106114071 - 22301074;30032202 116895875 MODEL JAAIVD010000012;XM_032896972 XP_032752863 uncharacterized protein LOC116895875 protein-coding 625850127 LOC116898504 alpha-enolase-like 4 127875400 127993127 + 116898504 MODEL JAAIVD010000003 pseudo 625850128 Armh1 armadillo like helical domain containing 1 FOUND IN cytosol (ortholog); plasma membrane (ortholog) 1 40828270 40852957 - 116887409 MODEL JAAIVD010000025;XM_032889013 XP_032744904 armadillo-like helical domain containing protein 1 protein-coding 625850143 LOC116889677 transcription elongation factor GreA-like 22301074;30032202 116889677 MODEL JAAIVD010000048;XM_032890567 XP_032746458 protein-coding 625850144 Pex5 peroxisomal biogenesis factor 5 ENCODES a protein that exhibits enzyme binding (ortholog); peroxisome matrix targeting signal-1 binding (ortholog); peroxisome membrane targeting sequence binding (ortholog); INVOLVED IN cell development (ortholog); cellular response to reactive oxygen species (ortholog); cerebral cortex cell migration (ortholog); ASSOCIATED WITH Cerebrohepatorenal Syndrome, Variant Types (ortholog); Fanconi anemia complementation group D2 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 6 23380257 23405950 + 22301074;30032202 116903294 MODEL JAAIVD010000024;XM_032905715;XM_032905716;XM_032905717;XM_032905718 XP_032761606;XP_032761607;XP_032761608;XP_032761609 protein-coding 625850171 Gp9 glycoprotein IX platelet INVOLVED IN blood coagulation (ortholog); blood coagulation, intrinsic pathway (ortholog); megakaryocyte development (ortholog); PARTICIPATES IN platelet aggregation pathway; ASSOCIATED WITH Bernard-Soulier syndrome (ortholog); Bernard-Soulier Syndrome, Type C (ortholog); genetic disease (ortholog) 6 58539507 58540850 - 22301074 116902735 MODEL JAAIVD010000024;XM_032905084 XP_032760975 platelet glycoprotein IX protein-coding 625850176 Galc galactosylceramidase ENCODES a protein that exhibits galactosylceramidase activity (ortholog); INVOLVED IN galactosylceramide catabolic process (ortholog); myelination (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH Creutzfeldt-Jakob disease (ortholog); epilepsy (ortholog); Experimental Liver Cirrhosis (ortholog) 7 111371949 111428439 - 22301074;30032202 116905342 MODEL JAAIVD010000026;XM_032908240 XP_032764131 galactocerebrosidase protein-coding 625850197 Ppil1 peptidylprolyl isomerase like 1 ENCODES a protein that exhibits disordered domain specific binding (ortholog); peptidyl-prolyl cis-trans isomerase activity (ortholog); INVOLVED IN embryonic brain development (ortholog); mRNA splicing, via spliceosome (ortholog); protein peptidyl-prolyl isomerization (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH genetic disease (ortholog); microcephaly (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleolus (ortholog); nucleus (ortholog) 18 4610082 4625535 + 22301074;30032202 116887292 MODEL JAAIVD010000013;XM_032888873 XP_032744764 peptidyl-prolyl cis-trans isomerase-like 1 protein-coding 625850205 Pfkfb3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 ENCODES a protein that exhibits 6-phosphofructo-2-kinase activity (ortholog); INVOLVED IN apoptotic process (ortholog); fructose 2,6-bisphosphate metabolic process (ortholog); glial cell differentiation (ortholog); PARTICIPATES IN glycolysis pathway; hypoxia inducible factor pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Arsenic Poisoning (ortholog); extrinsic cardiomyopathy (ortholog); FOUND IN nucleoplasm (ortholog) 14 17505557 17535962 - 22301074;30032202 116883428 MODEL JAAIVD010000009;XM_032884558;XM_032884559;XM_032884561;XM_032884562;XM_032884563;XM_032884564 XP_032740449;XP_032740450;XP_032740452;XP_032740453;XP_032740454;XP_032740455 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 protein-coding 625850234 Tln2 talin 2 INVOLVED IN presynaptic actin cytoskeleton organization (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH myoepithelioma (ortholog); FOUND IN cytosol (ortholog); fascia adherens (ortholog); focal adhesion (ortholog) 8 61564959 61802014 - 22301074;30032202 116907982 MODEL JAAIVD010000027;XM_032911227 XP_032767118 talin-2 protein-coding 625850295 Bhlhe41 basic helix-loop-helix family member e41 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH esophageal cancer (ortholog); Familial Natural Short Sleep 1 (ortholog); lung adenocarcinoma (ortholog) 6 3593438 3597843 - 22301074;30032202 116903083 MODEL JAAIVD010000024;XM_032905404 XP_032761295 class E basic helix-loop-helix protein 41 protein-coding 625850304 Slc10a6 solute carrier family 10 member 6 INVOLVED IN sodium-dependent organic anion transport (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog) 11 13699875 13722570 - 22301074;30032202 116912446 MODEL JAAIVD010000006;XM_032916515 XP_032772406 protein-coding 625850313 LOC116902573 small nucleolar RNA SNORA17 5 93462222 93462353 + 116902573 MODEL JAAIVD010000023;XR_004388167 snorna 625850316 LOC116893216 cell division cycle-associated protein 4-like 2 114568805 114569658 - 116893216 MODEL JAAIVD010000001 pseudo 625850317 Tlk1 tousled like kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN intracellular protein transport (ortholog); intracellular signal transduction (ortholog); protein phosphorylation (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Neoplasm Recurrence, Local (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 5 47992381 48112393 - 22301074;30032202 116901498 MODEL JAAIVD010000023;XM_032903465;XM_032903467;XM_032903468 XP_032759356;XP_032759358;XP_032759359 serine/threonine-protein kinase tousled-like 1 protein-coding 625850349 Fbxo33 F-box protein 33 7 72490009 72521554 - 22301074;30032202 116905085 MODEL JAAIVD010000026;XM_032907803 XP_032763694 F-box only protein 33 protein-coding 625850357 Lsm2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated ENCODES a protein that exhibits protein kinase binding (ortholog); small GTPase binding (ortholog); INVOLVED IN mRNA catabolic process (ortholog); mRNA splicing, via spliceosome (ortholog); spliceosomal tri-snRNP complex assembly (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); Lsm2-8 complex (ortholog) 18 7576883 7580842 + 22301074;30032202 116887181 MODEL JAAIVD010000013;XM_032888735;XM_032888736 XP_032744626;XP_032744627 U6 snRNA-associated Sm-like protein LSm2 protein-coding 625850369 LOC116893888 integrin alpha-D 2 73727822 73756019 - 22301074;30032202 116893888 MODEL JAAIVD010000001;XM_032895607 XP_032751498 protein-coding 625850402 Trnaf-gaa transfer RNA phenylalanine (anticodon GAA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 1 154633133 154633205 + 116890637 MODEL JAAIVD010000025 trna 625850403 LOC116906183 cofilin-1-like 7 110743529 110744246 - 116906183 MODEL JAAIVD010000026 pseudo 625850404 LOC116912697 60S ribosomal protein L13a-like 11 19230056 19230702 - 116912697 MODEL JAAIVD010000006 pseudo 625850405 LOC116903291 uncharacterized LOC116903291 6 23275188 23278108 + 116903291 MODEL JAAIVD010000024;XR_004388270 ncrna 625850410 Aanat aralkylamine N-acetyltransferase ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); AP-3 adaptor complex binding (ortholog); aralkylamine N-acetyltransferase activity (ortholog); INVOLVED IN cellular response to cAMP (ortholog); circadian rhythm (ortholog); melatonin biosynthetic process (ortholog); PARTICIPATES IN tryptophan metabolic pathway; ASSOCIATED WITH advanced sleep phase syndrome (ortholog); delayed sleep phase syndrome (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN cytosol (ortholog); perinuclear region of cytoplasm (ortholog) 9 67472313 67476908 - 30032202 116909693 MODEL JAAIVD010000002;XM_032913356 XP_032769247 serotonin N-acetyltransferase protein-coding 625850418 LOC116913023 U2 spliceosomal RNA 11 7365323 7365515 - 116913023 MODEL JAAIVD010000006;XR_004389570 snrna 625850421 Atp5pf ATP synthase peripheral stalk subunit F6 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); protein-containing complex binding (ortholog); proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN negative regulation of arachidonate secretion (ortholog); negative regulation of prostaglandin secretion (ortholog); positive regulation of blood pressure (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH essential hypertension (ortholog); Experimental Diabetes Mellitus (ortholog); heart disease (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); mitochondrion (ortholog) 4 57425849 57433595 + 22301074;30032202 116899036 MODEL JAAIVD010000003;XM_032900496;XM_032900497;XM_032900499;XM_032900500;XM_032900501 XP_032756387;XP_032756388;XP_032756390;XP_032756391;XP_032756392 ATP synthase-coupling factor 6, mitochondrial protein-coding 625850443 LOC116911546 60S ribosomal protein L21-like 10 64003240 64003746 + 22301074;30032202 116911546 MODEL JAAIVD010000005;XM_032915536 XP_032771427 protein-coding 625850447 LOC116907861 heat shock protein HSP 90-beta-like 8 77416933 77419105 + 116907861 MODEL JAAIVD010000027 pseudo 625850448 LOC116906776 olfactory receptor 7A17-like 1 156701179 156702138 - 22301074;30032202 116906776 MODEL JAAIVD010000025;XM_032909626 XP_032765517 protein-coding 625850451 LOC116887601 alpha/beta hydrolase domain-containing protein 17C-like 18 9360239 9360853 - 116887601 MODEL JAAIVD010000013 pseudo 625850452 Robo3 roundabout guidance receptor 3 INVOLVED IN axon guidance (ortholog); axon midline choice point recognition (ortholog); commissural neuron axon guidance (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Brain Injuries (ortholog); conjugate gaze palsy (ortholog); FOUND IN axon (ortholog) 8 33597691 33614297 - 22301074;30032202 116907752 MODEL JAAIVD010000027;XM_032910890 XP_032766781 roundabout homolog 3 protein-coding 625850484 LOC116909352 activated RNA polymerase II transcriptional coactivator p15-like 9 28760663 28761136 - 116909352 MODEL JAAIVD010000002 pseudo 625850485 LOC116902160 uncharacterized LOC116902160 5 133853239 133853837 + 116902160 MODEL JAAIVD010000023;XR_004388048 ncrna 625850489 LOC116894963 small nucleolar RNA SNORA3/SNORA45 family 2 91960983 91961113 - 116894963 MODEL JAAIVD010000001;XR_004387156 snorna 625850492 LOC116900673 cystatin-8 5 128330955 128337587 + 22301074;30032202 116900673 MODEL JAAIVD010000023;XM_032902377 XP_032758268 protein-coding 625850500 Cfl2 cofilin 2 ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN actin filament depolymerization (ortholog); actin filament fragmentation (ortholog); actin filament organization (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); centronuclear myopathy (ortholog); genetic disease (ortholog); FOUND IN I band (ortholog); Z disc (ortholog) 7 68222476 68226535 - 22301074;30032202 116905052 MODEL JAAIVD010000026;XM_032907742;XM_032907743 XP_032763633;XP_032763634 cofilin-2 protein-coding 625850511 LOC116894365 sialic acid-binding Ig-like lectin 10 2 155973503 155984052 + 30032202 116894365 MODEL JAAIVD010000001;XM_032896069 XP_032751960 protein-coding 625850524 Lhfpl6 LHFPL tetraspan subfamily member 6 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 3 101191396 101388032 - 30032202 116896882 MODEL JAAIVD010000012;XM_032898427 XP_032754318 LHFPL tetraspan subfamily member 6 protein protein-coding 625850532 LOC116885290 2'-5'-oligoadenylate synthase 1A-like 16 32895134 32907774 + 30032202 116885290 MODEL JAAIVD010000004;XM_032886539 XP_032742430 protein-coding 625850542 LOC116912121 ribosome biogenesis protein NSA2 homolog 11 4864584 4865614 - 30032202 116912121 MODEL JAAIVD010000006;XM_032916031 XP_032771922 protein-coding 625850547 LOC116887028 uncharacterized LOC116887028 18 39474372 39535473 - 116887028 MODEL JAAIVD010000013;XR_004386197 ncrna 625850551 Cfap20dc CFAP20 domain containing 12 78849291 79089929 - 116913406 MODEL JAAIVD010000007;XM_032917591 XP_032773482 uncharacterized protein C3orf67 homolog protein-coding 625850571 LOC116884956 40S ribosomal protein S10-like 15 32945289 32945801 + 116884956 MODEL JAAIVD010000010 pseudo 625850572 LOC116912037 transmembrane protein 69-like 11 79568399 79569143 + 116912037 MODEL JAAIVD010000006 pseudo 625850573 Rgs10 regulator of G protein signaling 10 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN G protein-coupled acetylcholine receptor signaling pathway (ortholog); positive regulation of GTPase activity (ortholog); response to amphetamine (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Experimental Seizures (ortholog); opioid abuse (ortholog); FOUND IN axon terminus (ortholog); cytosol (ortholog); dendritic spine (ortholog) 2 73533559 73575340 + 22301074;30032202 116891435 MODEL JAAIVD010000001;XM_032892496;XM_032892497 XP_032748387;XP_032748388 regulator of G-protein signaling 10 protein-coding 625850585 LOC116906980 olfactory receptor 150-like 8 82634773 82635744 + 22301074;30032202 116906980 MODEL JAAIVD010000027;XM_032909901 XP_032765792 protein-coding 625850589 LOC116884411 interferon-inducible GTPase 1-like 15 71489309 71493412 - 116884411 MODEL JAAIVD010000010 pseudo 625850590 Dars2 aspartyl-tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits aspartate-tRNA ligase activity (ortholog); aspartate-tRNA(Asn) ligase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN mitochondrial asparaginyl-tRNA aminoacylation (ortholog); tRNA aminoacylation (ortholog); ASSOCIATED WITH cerebellar ataxia (ortholog); Charcot-Marie-Tooth disease, axonal, type 2LL (ortholog); clubfoot (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) 10 40329329 40358694 - 22301074;30032202 116911322 MODEL JAAIVD010000005;XM_032915240 XP_032771131 aspartate--tRNA ligase, mitochondrial protein-coding 625850611 LOC116905414 chromatin target of PRMT1 protein-like 7 120249495 120250299 + 116905414 MODEL JAAIVD010000026 pseudo 625850612 LOC116898108 cellular tumor antigen p53-like 4 98729960 98730738 + 116898108 MODEL JAAIVD010000003 pseudo 625850613 LOC116913017 small nucleolar RNA ACA64 11 81752538 81752676 - 116913017 MODEL JAAIVD010000006;XR_004389569 snorna 625850616 LOC116894568 glyceraldehyde-3-phosphate dehydrogenase-like 2 178755080 178756004 + 116894568 MODEL JAAIVD010000001 pseudo 625850617 Cul5 cullin 5 ENCODES a protein that exhibits ubiquitin ligase complex scaffold activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cell migration (ortholog); cerebral cortex radially oriented cell migration (ortholog); negative regulation of focal adhesion assembly (ortholog); PARTICIPATES IN neddylation pathway; proteasome degradation pathway involving cullin-dependent ubiquitin ligases; ASSOCIATED WITH Brain Injuries (ortholog); Breast Neoplasms (ortholog); Hemorrhagic Shock (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); nucleus (ortholog); site of DNA damage (ortholog) 8 47605252 47655978 - 22301074;30032202 116908306 MODEL JAAIVD010000027;XM_032911583;XM_032911584 XP_032767474;XP_032767475 cullin-5 protein-coding 625850643 LOC116907163 olfactory receptor 7G2-like 8 14382122 14383060 + 22301074;30032202 116907163 MODEL JAAIVD010000027;XM_032910121 XP_032766012 protein-coding 625850646 Tsen2 tRNA splicing endonuclease subunit 2 INVOLVED IN tRNA splicing, via endonucleolytic cleavage and ligation (ortholog); tRNA-type intron splice site recognition and cleavage (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH Deglutition Disorders (ortholog); genetic disease (ortholog); hemolytic-uremic syndrome (ortholog); FOUND IN nucleoplasm (ortholog) 6 31134195 31187664 - 22301074;30032202 116903382 MODEL JAAIVD010000024;XM_032905875;XM_032905876;XM_032905877 XP_032761766;XP_032761767;XP_032761768 tRNA-splicing endonuclease subunit Sen2 protein-coding 625850671 LOC116906139 40S ribosomal protein S7-like 7 91142638 91153428 + 116906139 MODEL JAAIVD010000026 pseudo 625850672 LOC116898034 triggering receptor expressed on myeloid cells 1-like 4 81686912 81702473 - 30032202 116898034 MODEL JAAIVD010000003;XM_032899424;XM_032899426 XP_032755315;XP_032755317 protein-coding 625850681 LOC116910883 regulating synaptic membrane exocytosis protein 2-like 1 212609129 212646304 - 30032202 116910883 MODEL JAAIVD010000025;XM_032914658 XP_032770549 protein-coding 625850689 Trnah-gug transfer RNA histidin (anticodon GUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60893194 60893265 - 116897688 MODEL JAAIVD010000012 trna 625850690 Mbtps2 membrane bound transcription factor peptidase, site 2 ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); transcription regulator activator activity (ortholog); INVOLVED IN bone maturation (ortholog); membrane protein intracellular domain proteolysis (ortholog); mitotic G2 DNA damage checkpoint signaling (ortholog); PARTICIPATES IN sterol regulatory element-binding protein signaling pathway; ASSOCIATED WITH genetic disease (ortholog); hepatocellular carcinoma (ortholog); ichthyosis follicularis-alopecia-photophobia syndrome 1 (ortholog); FOUND IN cytoplasm (ortholog) X 35252114 35298749 - 22301074;30032202 116888387 MODEL JAAIVD010000014;XM_032889661 XP_032745552 membrane-bound transcription factor site-2 protease protein-coding 625850705 Dxo decapping exoribonuclease ENCODES a protein that exhibits 5'-3' exonuclease activity (ortholog); magnesium ion binding (ortholog); mRNA 5'-diphosphatase activity (ortholog); INVOLVED IN mRNA catabolic process (ortholog); NAD-cap decapping (ortholog); nuclear mRNA surveillance (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 18 7429918 7432056 + 30032202 116887317 MODEL JAAIVD010000013;XM_032888906 XP_032744797 decapping and exoribonuclease protein protein-coding 625850716 Gnmt glycine N-methyltransferase ENCODES a protein that exhibits folic acid binding (ortholog); glycine binding (ortholog); glycine N-methyltransferase activity (ortholog); INVOLVED IN glycine catabolic process (ortholog); glycine metabolic process (ortholog); glycogen metabolic process (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; folate mediated one-carbon metabolic pathway; ASSOCIATED WITH Chronic Hepatitis (ortholog); Experimental Diabetes Mellitus (ortholog); glycine N-methyltransferase deficiency (ortholog); FOUND IN cytosol (ortholog); methyltransferase complex (ortholog) 4 83138621 83141693 + 22301074;30032202 116899096 MODEL JAAIVD010000003;XM_032900605 XP_032756496 protein-coding 625850726 Dusp23 dual specificity phosphatase 23 ENCODES a protein that exhibits phosphatase activity (ortholog); protein tyrosine/serine/threonine phosphatase activity (ortholog); INVOLVED IN dephosphorylation (ortholog); FOUND IN nucleoplasm (ortholog) 10 51745755 51747757 - 22301074;30032202 116911132 MODEL JAAIVD010000005;XM_032914979 XP_032770870 dual specificity protein phosphatase 23 protein-coding 625850732 LOC116899833 small nucleolar RNA SNORA48 4 87318763 87318899 + 116899833 MODEL JAAIVD010000003 pseudo 625850733 Tbc1d2b TBC1 domain family member 2B INVOLVED IN endocytosis (ortholog); regulation of cilium assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); neurodevelopmental disorder with seizures and gingival overgrowth (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog) 12 5419514 5488527 - 116913067 MODEL JAAIVD010000007;XM_032917194 XP_032773085 protein-coding 625850750 Hecw2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 INVOLVED IN regulation of mitotic metaphase/anaphase transition (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 11 (ortholog); Developmental Disease (ortholog); genetic disease (ortholog); FOUND IN mitotic spindle (ortholog) 4 128531764 128906466 - 22301074;30032202 116899385 MODEL JAAIVD010000003;XM_032901104;XM_032901105;XM_032901106 XP_032756995;XP_032756996;XP_032756997 E3 ubiquitin-protein ligase HECW2 protein-coding 625850791 LOC116913205 uncharacterized LOC116913205 12 67814093 67827651 + 116913205 MODEL JAAIVD010000007;XM_032917389 XP_032773280 uncharacterized protein LOC116913205 protein-coding 625850799 LOC116914230 probable ATP-dependent RNA helicase DDX60 13 26946458 27106412 - 22301074;30032202 116914230 MODEL JAAIVD010000008;XM_032918425 XP_032774316 protein-coding 625850841 Btg4 BTG anti-proliferation factor 4 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); INVOLVED IN maternal-to-zygotic transition of gene expression (ortholog); negative regulation of mitotic cell cycle (ortholog); ASSOCIATED WITH Oocyte/Zygote/Embryo Maturation Arrest 8 (ortholog) 8 45494222 45561559 + 30032202 116907401 MODEL JAAIVD010000027;XM_032910355 XP_032766246 protein BTG4 protein-coding 625850851 LOC116898389 G protein-coupled receptor kinase 6-like 4 74199127 74202202 + 116898389 MODEL JAAIVD010000003 pseudo 625850852 LOC116891672 uncharacterized LOC116891672 2 91708715 91716533 - 116891672 MODEL JAAIVD010000001;XR_004386858 ncrna 625850856 LOC116901477 uncharacterized LOC116901477 5 46419657 46420342 - 116901477 MODEL JAAIVD010000023;XR_004388000 ncrna 625850860 Ankrd63 ankyrin repeat domain 63 5 96856791 96857963 - 22301074 116901783 MODEL JAAIVD010000023;XM_032903927 XP_032759818 ankyrin repeat domain-containing protein 63 protein-coding 625850863 Tnfrsf8 TNF receptor superfamily member 8 ENCODES a protein that exhibits protease binding (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); cellular response to mechanical stimulus (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH AIDS-Related Opportunistic Infections (ortholog); anaplastic large cell lymphoma (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN plasma membrane (ortholog) 1 13514359 13558747 + 22301074 116886203 MODEL JAAIVD010000025;XM_032887593 XP_032743484 tumor necrosis factor receptor superfamily member 8 protein-coding 625850880 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 56398180 56398251 + 116910807 MODEL JAAIVD010000002 trna 625850881 Bicdl1 BICD family like cargo adaptor 1 ENCODES a protein that exhibits dynactin binding (ortholog); small GTPase binding (ortholog); INVOLVED IN Golgi to secretory granule transport (ortholog); neuron projection development (ortholog); FOUND IN centrosome (ortholog) 16 38092125 38178154 + 30032202 116885760 MODEL JAAIVD010000004;XM_032887074;XM_032887075;XM_032887076;XM_032887077;XM_032887078;XR_004386041 XP_032742965;XP_032742966;XP_032742967;XP_032742968;XP_032742969 BICD family-like cargo adapter 1 protein-coding 625850907 Cchcr1 coiled-coil alpha-helical rod protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN protein export from nucleus (ortholog); ASSOCIATED WITH alopecia areata (ortholog); amphetamine abuse (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN centriole (ortholog); cytoplasm (ortholog); cytosol (ortholog) 18 8725394 8738172 + 22301074;30032202 116887454 MODEL JAAIVD010000013;XM_032889062;XM_032889063 XP_032744953;XP_032744954 protein-coding 625850933 LOC116909261 olfactory receptor 1468-like 9 31725628 31726569 - 22301074;30032202 116909261 MODEL JAAIVD010000002;XM_032912784 XP_032768675 protein-coding 625850936 Ppp1r3b protein phosphatase 1 regulatory subunit 3B ENCODES a protein that exhibits [phosphorylase] phosphatase activity (ortholog); enzyme binding (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN negative regulation of glycogen catabolic process (ortholog); positive regulation of glycogen biosynthetic process (ortholog); regulation of glycogen biosynthetic process (ortholog); PARTICIPATES IN glycogen biosynthetic pathway; glycogen degradation pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN glycogen granule (ortholog); protein phosphatase type 1 complex (ortholog) 13 51660239 51671723 - 22301074;30032202 116914747 MODEL JAAIVD010000008;XM_032919193 XP_032775084 protein-coding 625850942 Tsnaxip1 translin associated factor X interacting protein 1 ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytoplasm (ortholog) 17 25568138 25581074 + 30032202 116886505 MODEL JAAIVD010000011;XM_032888013 XP_032743904 translin-associated factor X-interacting protein 1 protein-coding 625850961 Rhob ras homolog family member B ENCODES a protein that exhibits GDP binding (ortholog); INVOLVED IN cell adhesion (ortholog); cellular response to hydrogen peroxide (ortholog); cellular response to ionizing radiation (ortholog); ASSOCIATED WITH Avian Sarcoma (ortholog); breast cancer (ortholog); cerebral palsy (ortholog); FOUND IN cleavage furrow (ortholog); cytosol (ortholog); early endosome (ortholog) 7 28824059 28826458 - 22301074;30032202 116906298 MODEL JAAIVD010000026;XM_032909192 XP_032765083 rho-related GTP-binding protein RhoB protein-coding 625850966 LOC116910375 40S ribosomal protein S6-like 9 82944893 82950237 + 116910375 MODEL JAAIVD010000002 pseudo 625850967 LOC116894718 60S ribosomal protein L7a-like 2 2984348 2994568 + 116894718 MODEL JAAIVD010000001 pseudo 625850968 LOC116893699 olfactory receptor 5B3-like 2 13133360 13134295 - 22301074;30032202 116893699 MODEL JAAIVD010000001;XM_032895416 XP_032751307 protein-coding 625850972 Mfn1 mitofusin 1 ENCODES a protein that exhibits GTPase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cellular response to glucose stimulus (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN mitochondria fusion pathway; ASSOCIATED WITH Acute Heart Injury (ortholog); acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrial outer membrane (ortholog) 3 122420736 122465784 - 22301074;30032202 116896962 MODEL JAAIVD010000012;XM_032898540 XP_032754431 mitofusin-1 protein-coding 625850994 P2rx1 purinergic receptor P2X 1 ENCODES a protein that exhibits ATP binding (ortholog); extracellularly ATP-gated monoatomic cation channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); insemination (ortholog); monoatomic cation transmembrane transport (ortholog); ASSOCIATED WITH toxic encephalopathy (ortholog); FOUND IN external side of plasma membrane (ortholog); glutamatergic synapse (ortholog); membrane raft (ortholog) 9 42495535 42511191 - 22301074;30032202 116909765 A0A8A1UD87 MODEL JAAIVD010000002;XM_032913453 XP_032769344 P2X purinoceptor 1 protein-coding 625851010 Lratd1 LRAT domain containing 1 INVOLVED IN cell morphogenesis (ortholog); cell motility (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog) 7 34095320 34099823 - 116904888 MODEL JAAIVD010000026;XM_032907489 XP_032763380 protein LRATD1 protein-coding 625851016 Hint2 histidine triad nucleotide binding protein 2 ENCODES a protein that exhibits adenosine 5'-monophosphoramidase activity (ortholog); INVOLVED IN lipid catabolic process (ortholog); negative regulation of peptidyl-lysine acetylation (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 1 2845392 2847810 + 30032202 116890963 MODEL JAAIVD010000025;XM_032891628 XP_032747519 histidine triad nucleotide-binding protein 2, mitochondrial protein-coding 625851025 Kcnh6 potassium voltage-gated channel subfamily H member 6 ENCODES a protein that exhibits inward rectifier potassium channel activity (ortholog); protein-containing complex binding (ortholog); voltage-gated potassium channel activity (ortholog); INVOLVED IN potassium ion transport (ortholog); ASSOCIATED WITH glucose metabolism disease (ortholog) 9 73078937 73101434 - 22301074;30032202 116910013 MODEL JAAIVD010000002;XM_032913800 XP_032769691 protein-coding 625851043 Ctxn1 cortexin 1 16 2390844 2392449 - 116885363 MODEL JAAIVD010000004;XM_032886636 XP_032742527 cortexin-1 protein-coding 625851049 LOC116903629 thyroid hormone receptor-associated protein 3-like 6 115173491 115177370 + 116903629 MODEL JAAIVD010000024 pseudo 625851050 Rps9 ribosomal protein S9 ENCODES a protein that exhibits 5.8S rRNA binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Liver Failure (ortholog); FOUND IN cytoplasm (ortholog); cytosolic ribosome (ortholog); cytosolic small ribosomal subunit (ortholog) 2 178292139 178295611 + 22301074;30032202 116892705 MODEL JAAIVD010000001;XM_032894571 XP_032750462 40S ribosomal protein S9 protein-coding 625851059 LOC116900187 xin actin-binding repeat-containing protein 2 5 44801292 44882591 + 22301074;30032202 116900187 MODEL JAAIVD010000023;XM_032901945;XM_032901946;XM_032901947 XP_032757836;XP_032757837;XP_032757838 protein-coding 625851078 LOC116897636 small nucleolar RNA U89 3 62362170 62362403 - 116897636 MODEL JAAIVD010000012;XR_004387615 snorna 625851081 Prpf6 pre-mRNA processing factor 6 ENCODES a protein that exhibits identical protein binding (ortholog); protein-macromolecule adaptor activity (ortholog); ribonucleoprotein complex binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); RNA localization (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH fundus dystrophy (ortholog); retinitis pigmentosa (ortholog); retinitis pigmentosa 60 (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) 5 158691168 158754943 + 22301074;30032202 116902452 MODEL JAAIVD010000023;XM_032905013 XP_032760904 pre-mRNA-processing factor 6 protein-coding 625851106 Ghitm growth hormone inducible transmembrane protein ENCODES a protein that exhibits calcium:proton antiporter activity (ortholog); INVOLVED IN calcium export from the mitochondrion (ortholog); calcium ion transport (ortholog); inner mitochondrial membrane organization (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog) 13 15594004 15605219 - 30032202 116914388 MODEL JAAIVD010000008;XM_032918603;XM_032918605 XP_032774494;XP_032774496 growth hormone-inducible transmembrane protein protein-coding 625851124 Tmem215 transmembrane protein 215 INVOLVED IN angiogenesis (ortholog); negative regulation of endothelial cell apoptotic process (ortholog); negative regulation of programmed necrotic cell death (ortholog) 1 117727874 117730738 - 116902643 MODEL JAAIVD010000025;XM_032905037 XP_032760928 protein-coding 625851130 Mtor mechanistic target of rapamycin kinase ENCODES a protein that exhibits identical protein binding (ortholog); inositol hexakisphosphate binding (ortholog); phosphoprotein binding (ortholog); INVOLVED IN 'de novo' pyrimidine nucleobase biosynthetic process (ortholog); behavioral response to pain (ortholog); cardiac cell development (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-4 signaling pathway; mTOR signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); adenocarcinoma (ortholog); AIDS-Associated Nephropathy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) 1 12214101 12318272 - 22301074;30032202 116892792 MODEL JAAIVD010000025;XM_032894667 XP_032750558 serine/threonine-protein kinase mTOR protein-coding 625851191 LOC116904571 elongin-C-like 6 19032991 19033324 + 116904571 MODEL JAAIVD010000024 pseudo 625851192 LOC116883200 sperm motility kinase X-like 14 40764108 40782183 - 22301074;30032202 116883200 MODEL JAAIVD010000009;XM_032884228 XP_032740119 protein-coding 625851196 LOC116885386 cytochrome P450 3A2-like 16 7820585 7866316 - 22301074;30032202 116885386 MODEL JAAIVD010000004;XM_032886666 XP_032742557 protein-coding 625851211 LOC116910689 small Cajal body-specific RNA 16 9 67009484 67009667 - 116910689 MODEL JAAIVD010000002;XR_004389218 ncrna 625851214 LOC116899942 U2 spliceosomal RNA 4 182739802 182739952 - 116899942 MODEL JAAIVD010000003 pseudo 625851215 LOC116884019 glyceraldehyde-3-phosphate dehydrogenase 14 1303916 1304926 + 22301074;30032202 116884019 MODEL JAAIVD010000009;XM_032885257 XP_032741148 protein-coding 625851219 LOC116895842 uncharacterized LOC116895842 3 82948544 82957026 - 116895842 MODEL JAAIVD010000012;XM_032896956 XP_032752847 uncharacterized protein LOC116895842 protein-coding 625851226 LOC116893660 membrane-spanning 4-domains subfamily A member 4D-like 2 11297427 11328633 - 22301074;30032202 116893660 MODEL JAAIVD010000001;XM_032895378;XM_032895379 XP_032751269;XP_032751270 protein-coding 625851242 LOC116889313 melanoma-associated antigen 10-like X 121523663 121528727 + 30032202 116889313 MODEL JAAIVD010000014;XM_032890435 XP_032746326 protein-coding 625851250 LOC116885106 small nucleolar RNA SNORD58 15 56982057 56982121 - 116885106 MODEL JAAIVD010000010;XR_004385971 snorna 625851253 LOC116894951 small nucleolar RNA SNORA70 2 225892672 225892809 + 116894951 MODEL JAAIVD010000001;XR_004387147 snorna 625851256 Cdk19 cyclin dependent kinase 19 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); positive regulation of apoptotic process (ortholog); regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH developmental and epileptic encephalopathy 87 (ortholog); genetic disease (ortholog); microcephaly (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 18 40134824 40275098 + 22301074;30032202 116886844 MODEL JAAIVD010000013;XM_032888295;XM_032888296;XM_032888297 XP_032744186;XP_032744187;XP_032744188 cyclin-dependent kinase 19 protein-coding 625851279 LOC116906029 40S ribosomal protein S15a-like 7 32672669 32706577 - 116906029 MODEL JAAIVD010000026 pseudo 625851280 Zbtb33 zinc finger and BTB domain containing 33 ENCODES a protein that exhibits methyl-CpG binding (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN DNA modification pathway; FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) X 101521516 101528686 + 22301074;30032202 116888431 MODEL JAAIVD010000014;XM_032889707 XP_032745598 transcriptional regulator Kaiso protein-coding 625851286 Mettl22 methyltransferase 22, Kin17 lysine ENCODES a protein that exhibits heat shock protein binding (ortholog); protein-lysine N-methyltransferase activity (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 9 13526183 13542792 - 30032202 116909682 MODEL JAAIVD010000002;XM_032913341 XP_032769232 methyltransferase like 22;methyltransferase-like protein 22 protein-coding 625851301 Slc24a2 solute carrier family 24 member 2 ENCODES a protein that exhibits calcium channel activity (ortholog); calcium, potassium:sodium antiporter activity (ortholog); INVOLVED IN calcium ion import (ortholog); calcium ion import across plasma membrane (ortholog); calcium ion transmembrane transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; visual phototransduction pathway; FOUND IN membrane (ortholog); plasma membrane (ortholog); postsynapse (ortholog) 1 66791134 67016689 + 22301074;30032202 116900441 MODEL JAAIVD010000025;XM_032902185 XP_032758076 sodium/potassium/calcium exchanger 2 protein-coding 625851316 LOC116904664 U7 small nuclear RNA 6 79972440 79972503 + 116904664 MODEL JAAIVD010000024;XR_004388364 snrna 625851319 LOC116893406 uncharacterized LOC116893406 2 173301059 173307862 + 30032202 116893406 MODEL JAAIVD010000001;XM_032895191 XP_032751082 uncharacterized protein LOC116893406 protein-coding 625851324 LOC116906668 endothelial differentiation-related factor 1-like 8 23874310 23874893 - 116906668 MODEL JAAIVD010000027 pseudo 625851325 LOC116884369 ATP synthase F(0) complex subunit B1, mitochondrial-like 15 43846478 43847080 + 116884369 MODEL JAAIVD010000010 pseudo 625851326 LOC116889652 elongation factor P-like 22301074;30032202 116889652 MODEL JAAIVD010000045;XM_032890556 XP_032746447 protein-coding 625851327 Dusp3 dual specificity phosphatase 3 ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); MAP kinase phosphatase activity (ortholog); phosphatase activity (ortholog); INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); dephosphorylation (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN axonemal microtubule doublet inner sheath (ortholog); cytosol (ortholog); immunological synapse (ortholog) 9 61263528 61275308 - 22301074;30032202 116909105 MODEL JAAIVD010000002;XM_032912580 XP_032768471 dual specificity protein phosphatase 3 protein-coding 625851335 LOC116886557 eukaryotic translation initiation factor 4E-like 17 43593929 43600414 + 116886557 MODEL JAAIVD010000011 pseudo 625851336 LOC116899620 UDP-glucuronosyltransferase 1-5 4 160208751 160210522 + 22301074 116899620 MODEL JAAIVD010000003;XM_032901582 XP_032757473 protein-coding 625851341 Slc32a1 solute carrier family 32 member 1 ENCODES a protein that exhibits gamma-aminobutyric acid transmembrane transporter activity (ortholog); gamma-aminobutyric acid:proton antiporter activity (ortholog); glycine transmembrane transporter activity (ortholog); INVOLVED IN beta-alanine transport (ortholog); gamma-aminobutyric acid import (ortholog); gamma-aminobutyric acid transport (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy (ortholog); Developmental and Epileptic Encephalopathy 114 (ortholog); epilepsy (ortholog); FOUND IN cell surface (ortholog); cell tip (ortholog); cone cell pedicle (ortholog) 5 137955482 137960126 + 30032202 116902239 MODEL JAAIVD010000023;XM_032904656 XP_032760547 vesicular inhibitory amino acid transporter protein-coding 625851347 LOC116911305 POU domain, class 5, transcription factor 1-like 10 20111506 20112563 + 116911305 MODEL JAAIVD010000005 pseudo 625851348 Klk8 kallikrein related peptidase 8 ENCODES a protein that exhibits peptidase activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN keratinocyte proliferation (ortholog); memory (ortholog); neuron projection morphogenesis (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); serine protease inhibitor complex (ortholog) 2 155588055 155594955 - 22301074;30032202;9722524 116892226 MODEL AJ005641;JAAIVD010000001;XM_032893790;XM_032893792 CAA06643;XP_032749681;XP_032749683 bsp1 kallikrein-8;serine protease protein-coding 625851361 LOC116915038 uncharacterized LOC116915038 13 31546949 31548018 + 116915038 MODEL JAAIVD010000008;XR_004389791 ncrna 625851365 LOC116887408 RT1 class I histocompatibility antigen, AA alpha chain-like 18 8432447 8507767 - 22301074;30032202 116887408 MODEL JAAIVD010000013;XM_032889005;XM_032889006;XM_032889007;XM_032889008;XM_032889009;XM_032889010;XM_032889011;XM_032889012;XM_032889014;XM_032889015;XM_032889016;XM_032889017 XP_032744896;XP_032744897;XP_032744898;XP_032744899;XP_032744900;XP_032744901;XP_032744902;XP_032744903;XP_032744905;XP_032744906;XP_032744907;XP_032744908 protein-coding 625851414 Necab1 N-terminal EF-hand calcium binding protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN blastocyst hatching (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 1 128605680 128793707 + 22301074;30032202 116903208 MODEL JAAIVD010000025;XM_032905585 XP_032761476 N-terminal EF-hand calcium-binding protein 1 protein-coding 625851431 LOC116889879 olfactory receptor 9-like 1 156481844 156482780 + 22301074 116889879 MODEL JAAIVD010000025;XM_032890703 XP_032746594 protein-coding 625851434 LOC116902504 U6 spliceosomal RNA 5 158521467 158521567 - 116902504 MODEL JAAIVD010000023 pseudo 625851435 Rgs14 regulator of G protein signaling 14 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); GDP-dissociation inhibitor activity (ortholog); GTPase activating protein binding (ortholog); INVOLVED IN cell division (ortholog); chromosome segregation (ortholog); learning (ortholog); ASSOCIATED WITH nephrolithiasis (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); dendrite (ortholog) 14 73691654 73705350 + 22301074;30032202 116883331 MODEL JAAIVD010000009;XM_032884401;XM_032884402 XP_032740292;XP_032740293 regulator of G-protein signaling 14 protein-coding 625851458 LOC116893227 vomeronasal type-2 receptor 116-like 2 115252567 115255130 - 116893227 MODEL JAAIVD010000001 pseudo 625851459 LOC116912940 U7 small nuclear RNA 11 59597757 59597819 - 116912940 MODEL JAAIVD010000006;XR_004389508 snrna 625851462 LOC116897562 U1 spliceosomal RNA 3 107039028 107039201 + 116897562 MODEL JAAIVD010000012 pseudo 625851463 LOC116907911 3-ketoacyl-CoA thiolase A, peroxisomal-like 8 110576033 110584985 + 30032202 116907911 MODEL JAAIVD010000027;XM_032911111 XP_032767002 protein-coding 625851479 Cdk2 cyclin dependent kinase 2 ENCODES a protein that exhibits cyclin binding (ortholog); cyclin-dependent protein kinase activity (ortholog); cyclin-dependent protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); centriole replication (ortholog); DNA damage response (ortholog); PARTICIPATES IN G1/S transition pathway; interleukin-2 signaling pathway; mTOR signaling pathway; ASSOCIATED WITH breast cancer (ortholog); Embryo Loss (ortholog); Endometrial Neoplasms (ortholog); FOUND IN chromosome, telomeric region (ortholog); ciliary basal body (ortholog); condensed chromosome (ortholog) 1 156174352 156182293 - 22301074;30032202;7862443 116906352 Q63700 MODEL D28753;D28754;JAAIVD010000025;XM_032909214;XM_032909215;XM_032909216;XR_004388647 BAA05947;BAA05948;XP_032765105;XP_032765106;XP_032765107 cyclin dependent kinase 2-alpha;cyclin dependent kinase 2-beta;cyclin-dependent kinase 2 protein-coding 625851499 LOC116894780 proteasome subunit alpha type-3-like 2 2881625 2884068 - 116894780 MODEL JAAIVD010000001 pseudo 625851500 LOC116887630 olfactory receptor 14J1-like 18 10535136 10537816 - 22301074;30032202 116887630 MODEL JAAIVD010000013;XM_032889230 XP_032745121 protein-coding 625851505 LOC116913923 voltage-dependent anion-selective channel protein 1-like 12 30469686 30486559 + 116913923 MODEL JAAIVD010000007 pseudo 625851506 LOC116910314 transmembrane protein 92-like 9 50773983 50776712 + 30032202 116910314 MODEL JAAIVD010000002;XM_032914178 XP_032770069 protein-coding 625851515 Creb3 cAMP responsive element binding protein 3 ENCODES a protein that exhibits cAMP response element binding protein binding (ortholog); CCR1 chemokine receptor binding (ortholog); chromatin binding (ortholog); INVOLVED IN DNA-templated transcription (ortholog); endoplasmic reticulum unfolded protein response (ortholog); induction of positive chemotaxis (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; ASSOCIATED WITH breast ductal carcinoma (ortholog); invasive ductal carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 1 2930078 2934617 - 30032202 116891001 MODEL JAAIVD010000025;XM_032891683 XP_032747574 cyclic AMP-responsive element-binding protein 3 protein-coding 625851528 Tatdn1 TatD DNase domain containing 1 ENCODES a protein that exhibits 3'-5'-DNA exonuclease activity (ortholog); DNA endonuclease activity (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) 1 233428516 233459512 - 30032202 116911866 MODEL JAAIVD010000025;XM_032915806;XM_032915807;XM_032915808;XM_032915809 XP_032771697;XP_032771698;XP_032771699;XP_032771700 putative deoxyribonuclease TATDN1 protein-coding 625851553 LOC116900608 60S ribosomal protein L7-like 5 101248122 101248894 - 116900608 MODEL JAAIVD010000023 pseudo 625851554 Trim63 tripartite motif containing 63 ENCODES a protein that exhibits titin binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); muscle contraction (ortholog); myotube cell development (ortholog); ASSOCIATED WITH Atrophy (ortholog); Cardiomegaly (ortholog); cardiomyopathy (ortholog); FOUND IN contractile muscle fiber (ortholog); Cul4-RING E3 ubiquitin ligase complex (ortholog); cytoplasm (ortholog) 1 23916950 23931001 - 22301074 116886735 MODEL JAAIVD010000025;XM_032888229 XP_032744120 E3 ubiquitin-protein ligase TRIM63 protein-coding 625851567 LOC116894678 carcinoembryonic antigen-related cell adhesion molecule 5-like 2 210160774 210185260 + 30032202 116894678 MODEL JAAIVD010000001;XM_032896380;XM_032896381;XM_032896382 XP_032752271;XP_032752272;XP_032752273 protein-coding 625851580 LOC116885074 small nucleolar RNA U13 15 9043431 9043532 - 116885074 MODEL JAAIVD010000010;XR_004385948 snorna 625851583 Cd74 CD74 molecule ENCODES a protein that exhibits amyloid-beta binding (ortholog); CD4 receptor binding (ortholog); cytokine binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); Breast Neoplasms (ortholog); Disease Progression (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) 15 71132199 71141584 - 22301074;2499873;30032202 116884619 MODEL JAAIVD010000010;X14254;XM_032885760 CAA32468;XP_032741651 HLA class II histocompatibility antigen gamma chain protein-coding 625851596 Dner delta/notch like EGF repeat containing ENCODES a protein that exhibits Notch binding (ortholog); INVOLVED IN central nervous system development (ortholog); glial cell differentiation (ortholog); Notch receptor processing (ortholog); PARTICIPATES IN Notch signaling pathway; FOUND IN dendrite (ortholog); early endosome (ortholog); neuronal cell body (ortholog) 4 157122078 157401849 - 22301074;30032202 116899572 MODEL JAAIVD010000003;XM_032901487 XP_032757378 delta and Notch-like epidermal growth factor-related receptor protein-coding 625851613 Slc66a2 solute carrier family 66 member 2 15 51938982 51976311 - 30032202 116884551 MODEL JAAIVD010000010;XM_032885688;XM_032885689;XM_032885690;XM_032885691 XP_032741579;XP_032741580;XP_032741581;XP_032741582 protein-coding 625851631 Ttc32 tetratricopeptide repeat domain 32 7 29271196 29277991 + 22301074 116904865 MODEL JAAIVD010000026;XM_032907456 XP_032763347 tetratricopeptide repeat protein 32 protein-coding 625851638 Il34 interleukin 34 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN interleukin-34-mediated signaling pathway (ortholog); microglial cell proliferation (ortholog); positive regulation of gene expression (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN extracellular region (inferred) 17 30450781 30512906 - 22301074;30032202 116886065 A0A8A1UAY9;A0A8A1UG96 MODEL JAAIVD010000011;XM_032887377 XP_032743268 interleukin-34 protein-coding 625851649 Jaml junction adhesion molecule like ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); integrin binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN gamma-delta T cell activation (ortholog); heterophilic cell-cell adhesion (ortholog); monocyte extravasation (ortholog); FOUND IN bicellular tight junction (ortholog); plasma membrane (ortholog) 8 39614837 39642296 + 30032202 116906896 MODEL JAAIVD010000027;XM_032909807 XP_032765698 junctional adhesion molecule-like protein-coding 625851663 LOC116898500 60S ribosomal protein L22-like 1 1 40391792 40392239 + 22301074;30032202 116898500 MODEL JAAIVD010000025;XM_032899736 XP_032755627 protein-coding 625851667 LOC116894024 olfactory receptor 52Z1-like 2 101986104 101987069 - 22301074 116894024 MODEL JAAIVD010000001;XM_032895740 XP_032751631 protein-coding 625851670 Oit3 oncoprotein induced transcript 3 INVOLVED IN renal system process (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); prostate cancer (ortholog) 18 25270691 25291733 - 22301074 116887267 MODEL JAAIVD010000013;XM_032888834 XP_032744725 oncoprotein-induced transcript 3 protein protein-coding 625851683 LOC116904365 thioredoxin reductase-like selenoprotein T 6 83798354 83801903 - 116904365 MODEL JAAIVD010000024 pseudo 625851684 LOC116893198 olfactory receptor 472 2 105966277 105969026 + 22301074;30032202 116893198 MODEL JAAIVD010000001;XM_032895095 XP_032750986 protein-coding 625851688 Kcne3 potassium voltage-gated channel subfamily E regulatory subunit 3 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN intracellular chloride ion homeostasis (ortholog); negative regulation of delayed rectifier potassium channel activity (ortholog); negative regulation of membrane repolarization during ventricular cardiac muscle cell action potential (ortholog); ASSOCIATED WITH Brugada syndrome (ortholog); Brugada syndrome 6 (ortholog); hypokalemic periodic paralysis (ortholog); FOUND IN basolateral part of cell (ortholog); cytoplasm (ortholog); dendrite (ortholog) 2 98474087 98480940 + 22301074;30032202 116891735 MODEL JAAIVD010000001;XM_032893036;XM_032893037;XM_032893038 XP_032748927;XP_032748928;XP_032748929 potassium voltage-gated channel subfamily E member 3 protein-coding 625851703 Meiob meiosis specific with OB-fold ENCODES a protein that exhibits chromatin binding (ortholog); single-stranded DNA 3'-5' DNA exonuclease activity (ortholog); single-stranded DNA binding (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); female meiosis I (ortholog); fertilization (ortholog); ASSOCIATED WITH Premature Ovarian Failure 23 (ortholog); spermatogenic failure 22 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 9 2092785 2124500 + 30032202 116910142 MODEL JAAIVD010000002;XM_032913987 XP_032769878 meiosis-specific with OB domain-containing protein protein-coding 625851721 LOC116900368 olfactory receptor 10AG1-like 5 69427626 69428631 + 22301074 116900368 MODEL JAAIVD010000023;XM_032902117 XP_032758008 protein-coding 625851725 Ccl28 C-C motif chemokine ligand 28 ENCODES a protein that exhibits chemokine activity (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cell chemotaxis (ortholog); negative regulation of leukocyte tethering or rolling (ortholog); ASSOCIATED WITH asthma (ortholog); atopic dermatitis (ortholog); bronchial disease (ortholog); FOUND IN extracellular region (ortholog); secretory granule (ortholog) 3 177247259 177268851 - 22301074;30032202 116897168 MODEL JAAIVD010000012;XM_032898845 XP_032754736 C-C motif chemokine 28 protein-coding 625851732 Aacs acetoacetyl-CoA synthetase ENCODES a protein that exhibits acetoacetate-CoA ligase activity (ortholog); short-chain fatty acid-CoA ligase activity (ortholog); INVOLVED IN adipose tissue development (ortholog); cellular response to cholesterol (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN ketone bodies metabolic pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); obesity (ortholog) 16 28396929 28439905 - 22301074;30032202 116885355 MODEL JAAIVD010000004;XM_032886629 XP_032742520 protein-coding 625851754 LOC116899017 keratin-associated protein 26-1-like 4 55211624 55212487 + 30032202 116899017 MODEL JAAIVD010000003;XM_032900465 XP_032756356 protein-coding 625851759 Plekha2 pleckstrin homology domain containing A2 ENCODES a protein that exhibits fibronectin binding (ortholog); laminin binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN positive regulation of cell-matrix adhesion (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; FOUND IN cytoplasm (ortholog); membrane (ortholog); protein-containing complex (ortholog) 13 61359058 61417776 + 30032202 116914745 MODEL JAAIVD010000008;XM_032919190;XM_032919191 XP_032775081;XP_032775082 pleckstrin homology domain-containing family A member 2 protein-coding 625851778 Trnap-ugg transfer RNA proline (anticodon UGG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 31456446 31456517 + 116910791 MODEL JAAIVD010000002 trna 625851779 Smarca2 SWI/SNF related BAF chromatin remodeling complex subunit ATPase 2 ENCODES a protein that exhibits chromatin binding (ortholog); transcription cis-regulatory region binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN aortic smooth muscle cell differentiation (ortholog); hematopoietic stem cell homeostasis (ortholog); negative regulation of cell growth (ortholog); PARTICIPATES IN histone modification pathway; SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Arnold-Chiari Malformation (ortholog); autism spectrum disorder (ortholog); FOUND IN chromatin (ortholog); nBAF complex (ortholog); npBAF complex (ortholog) 2 26661872 26810885 + 22301074;30032202 116891056 MODEL JAAIVD010000001;XM_032891750 XP_032747641 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2;probable global transcription activator SNF2L2 protein-coding 625851815 LOC116903821 C-type lectin domain family 2 member E-like 6 18615236 18619676 + 30032202 116903821 MODEL JAAIVD010000024;XM_032906534 XP_032762425 protein-coding 625851822 LOC116900594 cyclin-dependent kinases regulatory subunit 2-like 5 96198061 96198299 - 116900594 MODEL JAAIVD010000023 pseudo 625851823 LOC116895177 40S ribosomal protein S18-like 3 117922271 117922839 - 116895177 MODEL JAAIVD010000012 pseudo 625851824 LOC116908938 arachidonate 15-lipoxygenase 9 49963857 49972528 - 22301074;30032202 116908938 MODEL JAAIVD010000002;XM_032912396 XP_032768287 protein-coding 625851842 Sigirr single Ig and TIR domain containing INVOLVED IN acute-phase response (ortholog); negative regulation of chemokine production (ortholog); negative regulation of cytokine-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); FOUND IN membrane (ortholog) 2 8373230 8383172 + 22301074 116890886 MODEL JAAIVD010000001;XM_032891498;XM_032891499 XP_032747389;XP_032747390 single Ig IL-1-related receptor protein-coding 625851859 LOC116912698 vomeronasal type-2 receptor 116-like 11 19326032 19347635 - 116912698 MODEL JAAIVD010000006 pseudo 625851860 Fdft1 farnesyl-diphosphate farnesyltransferase 1 ENCODES a protein that exhibits squalene synthase [NAD(P)H] activity (ortholog); INVOLVED IN cholesterol biosynthetic process (ortholog); cholesterol biosynthetic process via desmosterol (ortholog); cholesterol biosynthetic process via lathosterol (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH alcohol use disorder (ortholog); cannabis abuse (ortholog); cataract (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 12 61199609 61225915 + 30032202 116913120 MODEL JAAIVD010000007;XM_032917277 XP_032773168 squalene synthase protein-coding 625851872 LOC116884114 U6 spliceosomal RNA 14 19699657 19699763 + 116884114 MODEL JAAIVD010000009;XR_004385845 snrna 625851875 LOC116902831 uncharacterized LOC116902831 6 88900247 88904118 - 116902831 MODEL JAAIVD010000024;XR_004388238 ncrna 625851879 LOC116897402 U6 spliceosomal RNA 3 196050125 196050231 - 116897402 MODEL JAAIVD010000012;XR_004387445 snrna 625851882 Cfap52 cilia and flagella associated protein 52 INVOLVED IN establishment of left/right asymmetry (ortholog); flagellated sperm motility (ortholog); gene expression (ortholog); ASSOCIATED WITH visceral heterotaxy 10 (ortholog); visceral heterotaxy 5 (ortholog); FOUND IN 9+2 motile cilium (ortholog); axonemal B tubule inner sheath (ortholog); axonemal microtubule (ortholog) 9 47526612 47566753 - 22301074;30032202 116909964 MODEL JAAIVD010000002;XM_032913739 XP_032769630 cilia- and flagella-associated protein 52 protein-coding 625851900 LOC116883568 histone H2B type 1-C/E/F/G/I 14 42683415 42683931 + 22301074;30032202 116883568 MODEL JAAIVD010000009;XM_032884750 XP_032740641 protein-coding 625851905 Rab43 RAB43, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GTPase activity (ortholog); INVOLVED IN cellular response to type II interferon (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); Golgi organization (ortholog); FOUND IN cis-Golgi network membrane (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment membrane (ortholog) 6 58505851 58528707 + 22301074;30032202 116903536 MODEL JAAIVD010000024;XM_032906150 XP_032762041 ras-related protein Rab-43 protein-coding 625851912 LOC116885112 small Cajal body-specific RNA 18 15 57217713 57217791 + 116885112 MODEL JAAIVD010000010;XR_004385977 ncrna 625851915 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92762622 92762693 - 116904856 MODEL JAAIVD010000024 trna 625851916 LOC116890019 60S ribosomal protein L30-like 1 194825670 194826123 - 22301074;30032202 116890019 MODEL JAAIVD010000025;XM_032890800 XP_032746691 protein-coding 625851921 Atpaf1 ATP synthase mitochondrial F1 complex assembly factor 1 ENCODES a protein that exhibits protein-containing complex stabilizing activity (ortholog); INVOLVED IN mitochondrial proton-transporting ATP synthase complex assembly (ortholog); ASSOCIATED WITH obesity (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 1 39473436 39494712 + 22301074;30032202 116898098 MODEL JAAIVD010000025;XM_032899486;XM_032899493 XP_032755377;XP_032755384 protein-coding 625851938 LOC116901467 sodium channel protein type 1 subunit alpha-like 5 43733024 43847508 - 22301074;30032202 116901467 MODEL JAAIVD010000023;XM_032903418 XP_032759309 protein-coding 625851969 Grwd1 glutamate rich WD repeat containing 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA replication origin binding (ortholog); histone binding (ortholog); INVOLVED IN DNA replication (ortholog); nucleosome assembly (ortholog); nucleosome disassembly (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); congenital diarrhea (ortholog); congenital diarrhea 14 (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 153685992 153691619 + 22301074 116892122 MODEL JAAIVD010000001;XM_032893605 XP_032749496 glutamate-rich WD repeat-containing protein 1 protein-coding 625851980 LOC116896241 cytochrome P450 2U1 ENCODES a protein that exhibits arachidonate omega-hydroxylase activity (ortholog); INVOLVED IN omega-hydroxylase P450 pathway (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Developmental Disabilities (ortholog); epilepsy (ortholog) 3 27569225 27583615 + 22301074;30032202 116896241 MODEL JAAIVD010000012;XM_032897308;XR_004387318 XP_032753199 protein-coding 625851992 LOC116913541 pyruvate kinase PKM-like 12 36390943 36392521 - 22301074;30032202 116913541 MODEL JAAIVD010000007;XM_032917741 XP_032773632 protein-coding 625851995 LOC116887592 class I histocompatibility antigen, Non-RT1.A alpha-1 chain-like 18 8685452 8688993 + 116887592 MODEL JAAIVD010000013 pseudo 625851996 LOC116913710 olfactory receptor 10G2 12 71484480 71485436 + 22301074 116913710 MODEL JAAIVD010000007;XM_032918007 XP_032773898 protein-coding 625851999 Bpifc BPI fold containing family C 1 162603809 162646614 + 22301074;30032202 116889969 MODEL JAAIVD010000025;XM_032890765 XP_032746656 BPI fold-containing family C protein protein-coding 625852017 Ect2l epithelial cell transforming 2 like 2 218689269 218761615 + 22301074 116893569 MODEL JAAIVD010000001;XM_032895276 XP_032751167 epithelial cell-transforming sequence 2 oncogene-like protein-coding 625852040 LOC116910981 kinesin-like protein KIF13A 10 94129063 94135079 + 116910981 MODEL JAAIVD010000005 pseudo 625852041 LOC116892434 peptidyl-prolyl cis-trans isomerase A-like 1 62486062 62488232 - 116892434 MODEL JAAIVD010000025 pseudo 625852042 LOC116884262 rRNA-processing protein FCF1 homolog 15 44793033 44793609 - 116884262 MODEL JAAIVD010000010 pseudo 625852043 Arhgef11 Rho guanine nucleotide exchange factor 11 ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of L-glutamate import across plasma membrane (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) 3 65823685 65945132 - 22301074;30032202 116896720 MODEL JAAIVD010000012;XM_032898138 XP_032754029 protein-coding 625852090 Clcc1 chloride channel CLIC like 1 ENCODES a protein that exhibits chloride channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN chloride transport (ortholog); endoplasmic reticulum calcium ion homeostasis (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); retinitis pigmentosa 32 (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 3 49581171 49605528 - 30032202 116896355 MODEL JAAIVD010000012;XM_032897459;XM_032897460;XM_032897461;XM_032897462 XP_032753350;XP_032753351;XP_032753352;XP_032753353 chloride channel CLIC-like protein 1 protein-coding 625852116 LOC116884997 putative Polycomb group protein ASXL3 15 21341601 21390625 - 30032202 116884997 MODEL JAAIVD010000010;XM_032886224 XP_032742115 protein-coding 625852123 LOC116898258 60S ribosomal protein L39-like 4 160358453 160358608 - 116898258 MODEL JAAIVD010000003 pseudo 625852124 LOC116887046 60S ribosomal protein L21-like 1 35115894 35116396 + 116887046 MODEL JAAIVD010000025 pseudo 625852125 Slc17a4 solute carrier family 17 member 4 ENCODES a protein that exhibits thyroid hormone transmembrane transporter activity (ortholog); urate transmembrane transporter activity (ortholog); INVOLVED IN sodium-dependent phosphate transport (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog) 14 42894629 42916996 - 22301074;30032202 116883395 MODEL JAAIVD010000009;XM_032884519;XM_032884520;XM_032884521;XM_032884522 XP_032740410;XP_032740411;XP_032740412;XP_032740413 probable small intestine urate exporter protein-coding 625852149 LOC116894739 UPF0461 protein C5orf24 homolog 2 108228523 108234186 - 116894739 MODEL JAAIVD010000001 pseudo 625852150 LOC116904554 natural killer cells antigen CD94-like 6 17797746 17809161 + 30032202 116904554 MODEL JAAIVD010000024;XM_032907349 XP_032763240 protein-coding 625852160 Hps1 HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); protein dimerization activity (ortholog); INVOLVED IN blood coagulation (ortholog); cell morphogenesis (ortholog); eye pigmentation (ortholog); ASSOCIATED WITH genetic disease (ortholog); Hermansky-Pudlak syndrome (ortholog); Hermansky-Pudlak syndrome 1 (ortholog); FOUND IN BLOC-3 complex (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) 2 41851657 41874732 - 22301074;30032202 116891191 MODEL JAAIVD010000001;XM_032892011 XP_032747902 Hermansky-Pudlak syndrome 1 protein protein-coding 625852182 Kremen2 kringle containing transmembrane protein 2 INVOLVED IN limb development (ortholog); negative regulation of ossification (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Ependymomas (ortholog) 9 1039720 1044135 - 22301074;30032202 116910224 MODEL JAAIVD010000002;XM_032914113;XM_032914114;XM_032914115 XP_032770004;XP_032770005;XP_032770006 kremen protein 2 protein-coding 625852202 Grik2 glutamate ionotropic receptor kainate type subunit 2 ENCODES a protein that exhibits extracellularly glutamate-gated ion channel activity (ortholog); glutamate receptor activity (ortholog); glutamate-gated calcium ion channel activity (ortholog); INVOLVED IN behavioral fear response (ortholog); chemical synaptic transmission (ortholog); detection of cold stimulus involved in thermoception (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal recessive intellectual developmental disorder 6 (ortholog); bipolar disorder (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); dendrite cytoplasm (ortholog) 18 47719014 48377165 - 22301074;30032202 116887507 MODEL JAAIVD010000013;XM_032889127;XM_032889128;XM_032889129;XM_032889130;XM_032889131;XM_032889133 XP_032745018;XP_032745019;XP_032745020;XP_032745021;XP_032745022;XP_032745024 glutamate receptor ionotropic, kainate 2 protein-coding 625852248 LOC116887475 alpha-enolase-like 1 45278513 45280089 + 116887475 MODEL JAAIVD010000025 pseudo 625852249 LOC116912152 60S ribosomal protein L36-like 11 54075306 54075932 + 116912152 MODEL JAAIVD010000006 pseudo 625852250 Trnag-gcc transfer RNA glycine (anticodon GCC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 10 50220273 50220343 + 116911903 MODEL JAAIVD010000005 trna 625852251 LOC116895282 calmodulin-1-like 3 9978034 9978477 + 22301074;30032202 116895282 MODEL JAAIVD010000012;XM_032896597 XP_032752488 protein-coding 625852254 Il2 interleukin 2 ENCODES a protein that exhibits carbohydrate binding (ortholog); cytokine activity (ortholog); glycosphingolipid binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via STAT (ortholog); extrinsic apoptotic signaling pathway in absence of ligand (ortholog); G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-2 signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); Acute Lung Injury (ortholog); adult T-cell leukemia/lymphoma (ortholog); FOUND IN extracellular region (ortholog) 3 116891667 116896372 + 22301074 116895518 MODEL JAAIVD010000012;XM_032896763 XP_032752654 interleukin-2 protein-coding 625852262 LOC116908824 olfactory receptor 1L4-like 9 92839010 92839954 - 22301074;30032202 116908824 MODEL JAAIVD010000002;XM_032912245 XP_032768136 protein-coding 625852265 Fam53a family with sequence similarity 53 member A 11 71222766 71241237 + 30032202 116912385 MODEL JAAIVD010000006;XM_032916442;XM_032916443 XP_032772333;XP_032772334 protein FAM53A protein-coding 625852276 Lyar Ly1 antibody reactive ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN erythrocyte development (ortholog); negative regulation of innate immune response (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 11 66952543 66967611 - 30032202 116912562 MODEL JAAIVD010000006;XM_032916665 XP_032772556 cell growth-regulating nucleolar protein protein-coding 625852289 Trio trio Rho guanine nucleotide exchange factor ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); negative regulation of fat cell differentiation (ortholog); neuron projection morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); postsynapse (ortholog) 3 152719261 153009831 + 22301074;30032202 116897057 MODEL JAAIVD010000012;XM_032898677 XP_032754568 triple functional domain protein protein-coding 625852350 Apbb3 amyloid beta precursor protein binding family B member 3 ENCODES a protein that exhibits amyloid-beta binding (ortholog); low-density lipoprotein particle receptor binding (ortholog); INVOLVED IN negative regulation of cell cycle phase transition (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of protein secretion (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); nuclear body (ortholog) 15 7708440 7715582 + 30032202 116884343 MODEL JAAIVD010000010;XM_032885475 XP_032741366 amyloid-beta A4 precursor protein-binding family B member 3 protein-coding 625852367 LOC116889897 olfactory receptor 2AP1-like 1 159990403 159991341 + 22301074;30032202 116889897 MODEL JAAIVD010000025;XM_032890720 XP_032746611 protein-coding 625852370 LOC116887935 interferon alpha-1-like 1 65142304 65142852 + 22301074;30032202 116887935 MODEL JAAIVD010000025;XM_032889397 XP_032745288 protein-coding 625852373 LOC116889993 glyceraldehyde-3-phosphate dehydrogenase-like 1 175895929 175896912 - 116889993 MODEL JAAIVD010000025 pseudo 625852374 LOC116889798 galectin-1 22301074;30032202 116889798 MODEL JAAIVD010000604;XM_032890647 XP_032746538 protein-coding 625852375 Smurf1 SMAD specific E3 ubiquitin protein ligase 1 ENCODES a protein that exhibits activin receptor binding (ortholog); I-SMAD binding (ortholog); R-SMAD binding (ortholog); INVOLVED IN autophagy (ortholog); BMP signaling pathway (ortholog); cell differentiation (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Cocaine-Related Disorders (ortholog); Spinal Cord Injuries (ortholog); withdrawal disorder (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); mitochondrion (ortholog) 16 8230555 8321137 + 22301074;30032202 116885183 MODEL JAAIVD010000004;XM_032886398 XP_032742289 E3 ubiquitin-protein ligase SMURF1 protein-coding 625852398 Gata3 GATA binding protein 3 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); aortic valve morphogenesis (ortholog); axon guidance (ortholog); PARTICIPATES IN interleukin-27 signaling pathway; Notch signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); adult T-cell leukemia/lymphoma (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 14 15891615 15911548 - 22301074;30032202 116883888 MODEL JAAIVD010000009;XM_032885155;XM_032885156;XM_032885157;XM_032885158 XP_032741046;XP_032741047;XP_032741048;XP_032741049 trans-acting T-cell-specific transcription factor GATA-3 protein-coding 625852413 Lta4h leukotriene A4 hydrolase ENCODES a protein that exhibits aminopeptidase activity (ortholog); epoxide hydrolase activity (ortholog); leukotriene-A4 hydrolase activity (ortholog); INVOLVED IN leukotriene biosynthetic process (ortholog); leukotriene metabolic process (ortholog); peptide catabolic process (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH adenocarcinoma (ortholog); asthma (ortholog); atherosclerosis (ortholog); FOUND IN cytosol (ortholog) 1 172502063 172533672 + 22301074;30032202 116908233 MODEL JAAIVD010000025;XM_032911498;XM_032911500 XP_032767389;XP_032767391 leukotriene A-4 hydrolase protein-coding 625852440 LOC116912653 protein Shroom3-like 11 5501427 5597706 + 30032202 116912653 MODEL JAAIVD010000006;XM_032916773 XP_032772664 protein-coding 625852446 LOC116889498 small nucleolar RNA SNORA48 X 50228155 50228299 + 116889498 MODEL JAAIVD010000014;XR_004386446 snorna 625852449 Mmp28 matrix metallopeptidase 28 INVOLVED IN negative regulation of macrophage chemotaxis (ortholog); ASSOCIATED WITH Arterial Occlusive Diseases (ortholog); FOUND IN cytoplasm (ortholog) 9 87221250 87242281 + 22301074;30032202 116909593 MODEL JAAIVD010000002;XM_032913216 XP_032769107 matrix metalloproteinase-28 protein-coding 625852461 LOC116893415 vomeronasal type-2 receptor 26-like 2 174453066 174461586 + 22301074;30032202 116893415 MODEL JAAIVD010000001;XM_032895197 XP_032751088 protein-coding 625852466 Adrb3 adrenoceptor beta 3 ENCODES a protein that exhibits beta-3 adrenergic receptor binding (ortholog); beta-adrenergic receptor activity (ortholog); beta3-adrenergic receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphas family; ASSOCIATED WITH Alzheimer's disease (ortholog); colitis (ortholog); congestive heart failure (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog); signaling receptor complex (ortholog) 13 59302722 59305461 + 22301074;30032202 116914760 MODEL JAAIVD010000008;XM_032919211 XP_032775102 beta-3 adrenergic receptor protein-coding 625852473 Tmem167b transmembrane protein 167B INVOLVED IN constitutive secretory pathway (ortholog); FOUND IN Golgi apparatus (ortholog) 3 49700260 49706161 + 116896357 MODEL JAAIVD010000012;XM_032897464 XP_032753355 protein kish-B protein-coding 625852480 LOC116888327 melanoma-associated antigen B5-like X 50018681 50019781 + 30032202 116888327 MODEL JAAIVD010000014;XM_032889599 XP_032745490 protein-coding 625852483 LOC116902492 U6 spliceosomal RNA 5 112416299 112416406 + 116902492 MODEL JAAIVD010000023;XR_004388107 snrna 625852486 Sdc4 syndecan 4 ENCODES a protein that exhibits fibronectin binding (ortholog); identical protein binding (ortholog); protein kinase C binding (ortholog); INVOLVED IN inner ear receptor cell stereocilium organization (ortholog); negative regulation of T cell proliferation (ortholog); neural tube closure (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH bacterial infectious disease (ortholog); COVID-19 (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN cell surface (ortholog); costamere (ortholog); focal adhesion (ortholog) 5 153522211 153539195 + 30032202 116902362 MODEL JAAIVD010000023;XM_032904856 XP_032760747 syndecan-4 protein-coding 625852495 LOC116905161 60S ribosomal protein L26-like 7 87571241 87620157 - 22301074;30032202 116905161 MODEL JAAIVD010000026;XM_032907935 XP_032763826 protein-coding 625852500 Mob3c MOB kinase activator 3C 1 39513101 39516786 + 30032202 116898141 MODEL JAAIVD010000025;XM_032899521 XP_032755412 protein-coding 625852507 Arhgef26 Rho guanine nucleotide exchange factor 26 INVOLVED IN endothelial cell morphogenesis (ortholog); ruffle assembly (ortholog); FOUND IN plasma membrane (ortholog) 3 92752686 92862117 - 22301074;30032202 116896831 MODEL JAAIVD010000012;XM_032898313 XP_032754204 protein-coding 625852525 LOC116911883 U6 spliceosomal RNA 10 59496646 59496751 + 116911883 MODEL JAAIVD010000005;XR_004389397 snrna 625852528 LOC116911124 potassium channel subfamily T member 2-like 10 20474761 20505499 + 116911124 MODEL JAAIVD010000005;XM_032914971 XP_032770862 protein-coding 625852537 Luzp2 leucine zipper protein 2 2 144807512 145179767 - 116892059 MODEL JAAIVD010000001;XM_032893527 XP_032749418 protein-coding 625852553 LOC116893194 olfactory receptor 6-like 2 105113194 105114075 - 116893194 MODEL JAAIVD010000001 pseudo 625852554 Hcn3 hyperpolarization activated cyclic nucleotide gated potassium channel 3 ENCODES a protein that exhibits intracellularly cAMP-activated cation channel activity (ortholog); voltage-gated potassium channel activity (ortholog); voltage-gated sodium channel activity (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to dopamine (ortholog); potassium ion transmembrane transport (ortholog); ASSOCIATED WITH Dental Pulp Exposure (ortholog); Experimental Diabetes Mellitus (ortholog); Parkinson's disease (ortholog); FOUND IN axon (ortholog); cone cell pedicle (ortholog); dendrite (ortholog) 3 64515988 64529912 + 22301074 116896666 MODEL JAAIVD010000012;XM_032898025 XP_032753916 potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3 protein-coding 625852565 LOC116906523 U6 spliceosomal RNA 7 55354378 55354484 - 116906523 MODEL JAAIVD010000026;XR_004388745 snrna 625852568 LOC116896381 60S ribosomal protein L36-like 1 28763404 28764709 - 22301074;30032202 116896381 MODEL JAAIVD010000025;XM_032897912 XP_032753803 protein-coding 625852573 Ddhd2 DDHD domain containing 2 ENCODES a protein that exhibits triacylglycerol lipase activity (ortholog); INVOLVED IN lipid droplet organization (ortholog); locomotory behavior (ortholog); positive regulation of mitochondrial fission (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary spastic paraplegia (ortholog); hereditary spastic paraplegia 54 (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) 13 60744087 60773449 + 22301074;30032202 116915114 MODEL JAAIVD010000008;XM_032919548;XM_032919549;XR_004389799 XP_032775439;XP_032775440 phospholipase DDHD2 protein-coding 625852602 LOC116897951 olfactory receptor 187-like 4 43122812 43123747 + 22301074;30032202 116897951 MODEL JAAIVD010000003;XM_032899350 XP_032755241 protein-coding 625852606 LOC116914020 uncharacterized LOC116914020 12 62745017 62768384 - 116914020 MODEL JAAIVD010000007;XR_004389657 ncrna 625852611 Praf2 PRA1 domain family member 2 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); postsynapse (ortholog) X 14400017 14402635 - 30032202 116888610 MODEL JAAIVD010000014;XM_032889909 XP_032745800 PRA1 family protein 2 protein-coding 625852618 LOC116897341 uncharacterized protein KIAA0825 homolog 3 215765497 215785527 + 116897341 MODEL JAAIVD010000012;XM_032899098;XM_032899099 XP_032754989;XP_032754990 protein-coding 625852628 LOC116890369 U6 spliceosomal RNA 1 144770212 144770312 - 116890369 MODEL JAAIVD010000025 pseudo 625852629 LOC116908415 small nucleolar RNA SNORA17 8 59188578 59188705 - 116908415 MODEL JAAIVD010000027;XR_004388954 snorna 625852632 Fam240a family with sequence similarity 240 member A 8 101492249 101494270 - 116907403 MODEL JAAIVD010000027;XM_032910357 XP_032766248 protein FAM240A protein-coding 625852638 LOC116891410 protein FAM24A 2 70502228 70511357 - 116891410 MODEL JAAIVD010000001;XM_032892437 XP_032748328 protein-coding 625852647 LOC116883499 uncharacterized LOC116883499 14 48081129 48108283 + 116883499 MODEL JAAIVD010000009;XR_004385766 ncrna 625852652 Dop1a DOP1 leucine zipper like protein A FOUND IN Golgi apparatus (ortholog); Golgi-associated vesicle (ortholog) 8 80497986 80599440 + 30032202 116906807 MODEL JAAIVD010000027;XM_032909682 XP_032765573 protein dopey-1 protein-coding 625852696 LOC116895837 heterogeneous nuclear ribonucleoprotein A1-like 3 80814719 80815689 - 116895837 MODEL JAAIVD010000012 pseudo 625852697 LOC116889346 ran guanine nucleotide release factor-like X 105253939 105254483 + 116889346 MODEL JAAIVD010000014 pseudo 625852698 Polr3e RNA polymerase III subunit E INVOLVED IN termination of RNA polymerase III transcription (ortholog); transcription by RNA polymerase III (ortholog); transcription initiation at RNA polymerase III promoter (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; FOUND IN nucleoplasm (ortholog); RNA polymerase III complex (ortholog) 2 80850711 80878877 - 22301074;30032202 116891576 MODEL JAAIVD010000001;XM_032892755;XM_032892756 XP_032748646;XP_032748647 DNA-directed RNA polymerase III subunit RPC5 protein-coding 625852725 LOC116889796 60S ribosomal protein L37a-like 116889796 MODEL JAAIVD010000499 pseudo 625852726 LOC116898494 small membrane A-kinase anchor protein-like 4 122298491 122319513 + 116898494 MODEL JAAIVD010000003 pseudo 625852727 Acsf2 acyl-CoA synthetase family member 2 ENCODES a protein that exhibits medium-chain fatty acid-CoA ligase activity (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); FOUND IN mitochondrion (ortholog) 9 50943078 50985279 + 30032202 116909283 MODEL JAAIVD010000002;XM_032912820 XP_032768711 medium-chain acyl-CoA ligase ACSF2, mitochondrial protein-coding 625852747 LOC116899904 U1 spliceosomal RNA 4 95524419 95524576 - 116899904 MODEL JAAIVD010000003;XR_004387876 snrna 625852750 Itgb6 integrin subunit beta 6 ENCODES a protein that exhibits coreceptor activity (ortholog); integrin binding (ortholog); molecular function activator activity (ortholog); INVOLVED IN amelogenesis (ortholog); bone development (ortholog); bronchiole development (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH amelogenesis imperfecta type 1H (ortholog); asthma (ortholog); autoimmune disease (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); focal adhesion (ortholog) 5 38244518 38319850 - 30032202 116901441 MODEL JAAIVD010000023;XM_032903369 XP_032759260 integrin beta-6 protein-coding 625852770 LOC116884491 ferritin light chain 1 1 269619556 269620461 + 22301074;30032202 116884491 MODEL JAAIVD010000025;XM_032885615 XP_032741506 protein-coding 625852775 Osr1 odd-skipped related transcription factor 1 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell differentiation (ortholog); cell proliferation involved in kidney development (ortholog); cellular response to retinoic acid (ortholog); FOUND IN cell cortex (ortholog); cytosol (ortholog); nucleus (ortholog) 7 29802566 29809465 + 30032202 116905627 MODEL JAAIVD010000026;XM_032908608 XP_032764499 protein odd-skipped-related 1 protein-coding 625852782 LOC116907334 rho GTPase-activating protein 33-like 8 31816121 31820101 + 116907334 MODEL JAAIVD010000027 pseudo 625852783 LOC116896594 protein S100-A6 3 63002990 63004308 - 22301074;30032202 116896594 MODEL JAAIVD010000012;XM_032897835 XP_032753726 protein-coding 625852790 Slc4a8 solute carrier family 4 member 8 ENCODES a protein that exhibits bicarbonate transmembrane transporter activity (ortholog); chloride transmembrane transporter activity (ortholog); identical protein binding (ortholog); INVOLVED IN basolateral protein secretion (ortholog); bicarbonate transport (ortholog); chloride transmembrane transport (ortholog); ASSOCIATED WITH prediabetes syndrome (ortholog); FOUND IN asymmetric synapse (ortholog); axon terminus (ortholog); basolateral plasma membrane (ortholog) 1 262276861 262347742 - 22301074;30032202 116883889 MODEL JAAIVD010000025;XM_032885161;XM_032885164 XP_032741052;XP_032741055 electroneutral sodium bicarbonate exchanger 1 protein-coding 625852824 Afmid arylformamidase INVOLVED IN L-tryptophan catabolic process (ortholog); obsolete L-tryptophan catabolic process to L-kynurenine (ortholog); PARTICIPATES IN kynurenine metabolic pathway; tryptophan metabolic pathway; FOUND IN cytoplasm (ortholog) 9 66225041 66239986 - 22301074 116908868 MODEL JAAIVD010000002;XM_032912308;XM_032912309 XP_032768199;XP_032768200 kynurenine formamidase protein-coding 625852844 LOC116900674 cystatin-13 5 128357996 128364848 + 22301074 116900674 MODEL JAAIVD010000023;XM_032902379 XP_032758270 protein-coding 625852849 Rnf214 ring finger protein 214 8 40392307 40427147 - 30032202 116906702 MODEL JAAIVD010000027;XM_032909500;XM_032909501;XM_032909502;XM_032909503;XM_032909504;XM_032909505;XM_032909507 XP_032765391;XP_032765392;XP_032765393;XP_032765394;XP_032765395;XP_032765396;XP_032765398 protein-coding 625852882 LOC116897397 U6 spliceosomal RNA 3 45305695 45305801 - 116897397 MODEL JAAIVD010000012;XR_004387441 snrna 625852885 LOC116913209 transcription factor BTF3-like 12 68163909 68165619 + 116913209 MODEL JAAIVD010000007 pseudo 625852886 Cracr2b calcium release activated channel regulator 2B INVOLVED IN store-operated calcium entry (ortholog) 2 8021407 8026787 - 22301074 116890864 MODEL JAAIVD010000001;XM_032891432;XM_032891433;XM_032891434 XP_032747323;XP_032747324;XP_032747325 EF-hand calcium-binding domain-containing protein 4A protein-coding 625852906 Casp2 caspase 2 ENCODES a protein that exhibits cysteine-type endopeptidase activity (ortholog); identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); cellular response to mechanical stimulus (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Autosomal Recessive Intellectual Developmental Disorder 80 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleus (ortholog) 6 97937054 97954856 - 22301074;30032202 116903899 MODEL JAAIVD010000024;XM_032906667;XM_032906668 XP_032762558;XP_032762559 caspase-2 protein-coding 625852923 LOC116888232 aristaless homeobox protein-like X 101448081 101455506 - 30032202 116888232 MODEL JAAIVD010000014;XM_032889518 XP_032745409 protein-coding 625852931 Rapsn receptor associated protein of the synapse ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); ionotropic glutamate receptor binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN establishment of protein localization to postsynaptic membrane (ortholog); neuromuscular junction development (ortholog); neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH autoimmune disease (ortholog); congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 11 (ortholog); FOUND IN Golgi apparatus (ortholog); membrane (ortholog); neuromuscular junction (ortholog) 5 65205561 65215071 + 22301074 116900336 MODEL JAAIVD010000023;XM_032902090 XP_032757981 43 kDa receptor-associated protein of the synapse protein-coding 625852943 LOC116893974 40S ribosomal protein S29-like 2 100554910 100555088 - 116893974 MODEL JAAIVD010000001 pseudo 625852944 LOC116913739 mast cell protease 2-like 12 68981895 68983978 - 116913739 MODEL JAAIVD010000007 pseudo 625852945 LOC116908165 uncharacterized LOC116908165 8 40816979 40828351 - 116908165 MODEL JAAIVD010000027;XM_032911463 XP_032767354 uncharacterized protein LOC116908165 protein-coding 625852958 Ambn ameloblastin ENCODES a protein that exhibits growth factor activity (ortholog); INVOLVED IN cell adhesion (ortholog); regulation of cell population proliferation (ortholog); ASSOCIATED WITH amelogenesis imperfecta type 1F (ortholog) 11 1952005 1964959 + 22301074;30032202 116912607 MODEL JAAIVD010000006;XM_032916731;XM_032916732 XP_032772622;XP_032772623 protein-coding 625852977 Mgat5b alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B ENCODES a protein that exhibits alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity (ortholog); manganese ion binding (ortholog); INVOLVED IN protein N-linked glycosylation (ortholog); protein O-linked glycosylation (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN Golgi apparatus (ortholog) 9 67099441 67165051 - 22301074;30032202 116909476 MODEL JAAIVD010000002;XM_032913070 XP_032768961 protein-coding 625852999 LOC116896011 septin-7-like 3 175465001 175466431 + 116896011 MODEL JAAIVD010000012 pseudo 625853000 C3H1orf52 chromosome 3 C1orf52 homolog FOUND IN nucleoplasm (ortholog) 3 14946789 14953463 - 116896177 MODEL JAAIVD010000012;XM_032897215 XP_032753106 UPF0690 protein C1orf52 homolog protein-coding 625853007 Tacstd2 tumor associated calcium signal transducer 2 INVOLVED IN negative regulation of branching involved in ureteric bud morphogenesis (ortholog); negative regulation of cell motility (ortholog); negative regulation of epithelial cell migration (ortholog); ASSOCIATED WITH corneal dystrophy (ortholog); endometriosis (ortholog); gelatinous drop-like corneal dystrophy (ortholog); FOUND IN basal plasma membrane (ortholog); extracellular region (ortholog); lateral plasma membrane (ortholog) 6 77089669 77091375 - 30032202 116902787 MODEL JAAIVD010000024;XM_032905125 XP_032761016 tumor-associated calcium signal transducer 2 protein-coding 625853012 LOC116888056 chromobox protein homolog 1-like X 87807121 87811157 - 116888056 MODEL JAAIVD010000014 pseudo 625853013 LOC116909684 tryptase 9 2609522 2611930 - 22301074 116909684 MODEL JAAIVD010000002;XM_032913343;XM_032913344 XP_032769234;XP_032769235 protein-coding 625853027 Erbb3 erb-b2 receptor tyrosine kinase 3 ENCODES a protein that exhibits ErbB-3 class receptor binding (ortholog); growth factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN axonogenesis (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT2 receptor; epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH amblyopia (ortholog); Breast Neoplasms (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) 1 156035846 156057450 - 22301074;30032202 116906256 MODEL JAAIVD010000025;XM_032909155 XP_032765046 receptor tyrosine-protein kinase erbB-3 protein-coding 625853059 Gpcpd1 glycerophosphocholine phosphodiesterase 1 ENCODES a protein that exhibits glycerophosphocholine phosphodiesterase activity (ortholog); INVOLVED IN skeletal muscle tissue development (ortholog); ASSOCIATED WITH Neoplasm Metastasis (ortholog); FOUND IN cytoplasm (ortholog) 5 112238572 112283213 - 22301074;30032202 116902003 MODEL JAAIVD010000023;XM_032904267;XM_032904268;XM_032904269 XP_032760158;XP_032760159;XP_032760160 glycerophosphocholine phosphodiesterase GPCPD1 protein-coding 625853088 LOC116914108 small nucleolar RNA SNORA19 12 12820645 12820773 - 116914108 MODEL JAAIVD010000007;XR_004389674 snorna 625853091 LOC116888257 surfeit locus protein 6-like X 10068240 10069300 - 116888257 MODEL JAAIVD010000014 pseudo 625853092 LOC116913963 60S ribosomal protein L21-like 12 46528835 46529355 - 116913963 MODEL JAAIVD010000007 pseudo 625853093 Elovl6 ELOVL fatty acid elongase 6 ENCODES a protein that exhibits acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); fatty acid elongase activity (ortholog); INVOLVED IN fatty acid elongation (ortholog); fatty acid elongation, monounsaturated fatty acid (ortholog); fatty acid elongation, saturated fatty acid (ortholog); ASSOCIATED WITH congestive heart failure (ortholog); obesity (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); fatty acid elongase complex (ortholog) 3 29671927 29783252 - 22301074;30032202 116896267 MODEL JAAIVD010000012;XM_032897344 XP_032753235 elongation of very long chain fatty acids protein 6 protein-coding 625853102 LOC116909073 heterogeneous nuclear ribonucleoprotein A3-like 1 193585630 193587155 - 116909073 MODEL JAAIVD010000025 pseudo 625853103 LOC116900612 mortality factor 4-like protein 1 5 104608945 104609979 + 116900612 MODEL JAAIVD010000023;XR_004387938 pseudo 625853106 LOC116896039 trifunctional nucleotide phosphoesterase protein YfkN-like 3 192224450 192289749 - 116896039 MODEL JAAIVD010000012 pseudo 625853107 Pcare photoreceptor cilium actin regulator INVOLVED IN photoreceptor cell outer segment organization (ortholog); protein localization to photoreceptor outer segment (ortholog); ASSOCIATED WITH cone-rod dystrophy (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN cilium (ortholog); photoreceptor inner segment (ortholog); photoreceptor outer segment (ortholog) 7 21462560 21470976 + 30032202 116905643 MODEL JAAIVD010000026;XM_032908619 XP_032764510 protein-coding 625853112 Thap7 THAP domain containing 7 ENCODES a protein that exhibits C2H2 zinc finger domain binding (ortholog); general transcription initiation factor binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN chromatin organization (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN chromatin (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) 4 2779467 2782505 - 30032202 116898642 MODEL JAAIVD010000003;XM_032899868;XM_032899869 XP_032755759;XP_032755760 THAP domain-containing protein 7 protein-coding 625853122 LOC116911192 nuclear receptor corepressor 1-like 10 8018557 8020096 - 30032202 116911192 MODEL JAAIVD010000005;XM_032915062 XP_032770953 protein-coding 625853129 Fosb FosB proto-oncogene, AP-1 transcription factor subunit ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN behavioral response to cocaine (ortholog); cellular response to calcium ion (ortholog); cellular response to hormone stimulus (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); alcohol withdrawal syndrome (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 171311080 171318457 + 22301074;30032202 116892537 MODEL JAAIVD010000001;XM_032894298;XM_032894299 XP_032750189;XP_032750190 protein fosB protein-coding 625853141 LOC116908934 keratin-associated protein 9-3-like 9 54413758 54414126 - 22301074 116908934 MODEL JAAIVD010000002;XM_032912391 XP_032768282 protein-coding 625853144 Dusp1 dual specificity phosphatase 1 ENCODES a protein that exhibits growth factor binding (ortholog); MAP kinase tyrosine/serine/threonine phosphatase activity (ortholog); mitogen-activated protein kinase binding (ortholog); INVOLVED IN cellular response to chemokine (ortholog); cellular response to hormone stimulus (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT2 receptor; c-Jun N-terminal kinases MAPK signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH Amyloid Neuropathies (ortholog); anti-basement membrane glomerulonephritis (ortholog); arteriosclerosis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 9 4946337 4949155 + 22301074;30032202 116909607 MODEL JAAIVD010000002;XM_032913229 XP_032769120 dual specificity protein phosphatase 1 protein-coding 625853152 Jun Jun proto-oncogene, AP-1 transcription factor subunit ENCODES a protein that exhibits cAMP response element binding (ortholog); chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN angiogenesis (ortholog); axon regeneration (ortholog); cellular response to anisomycin (ortholog); PARTICIPATES IN adenosine signaling pathway; endothelin signaling pathway; fibroblast growth factor signaling pathway; ASSOCIATED WITH Alcohol-Related Disorders (ortholog); angiosarcoma (ortholog); Asphyxia (ortholog); FOUND IN chromatin (ortholog); euchromatin (ortholog); nucleoplasm (ortholog) 1 58027600 58030788 - 30032202 116900104 MODEL JAAIVD010000025;XM_032901885 XP_032757776 transcription factor AP-1 protein-coding 625853157 LOC116893348 keratin-associated protein 21-2 2 157308631 157309001 - 116893348 MODEL JAAIVD010000001;XM_032895156 XP_032751047 protein-coding 625853161 C8H21orf58 chromosome 8 C21orf58 homolog 8 106675907 106687501 - 116907299 MODEL JAAIVD010000027;XM_032910247 XP_032766138 uncharacterized protein C21orf58 homolog protein-coding 625853172 Iqsec1 IQ motif and Sec7 domain ArfGEF 1 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN dendritic spine development (ortholog); positive regulation of focal adhesion disassembly (ortholog); positive regulation of keratinocyte migration (ortholog); ASSOCIATED WITH Developmental Disease (ortholog); intellectual developmental disorder with short stature and behavioral abnormalities (ortholog); Liver Metastasis (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); nucleoplasm (ortholog) 6 55939370 56256777 + 22301074;30032202 116903505 MODEL JAAIVD010000024;XM_032906103;XM_032906104;XM_032906105;XM_032906106;XM_032906107;XM_032906108 XP_032761994;XP_032761995;XP_032761996;XP_032761997;XP_032761998;XP_032761999 IQ motif and SEC7 domain-containing protein 1 protein-coding 625853211 LOC116914973 polyadenylate-binding protein-interacting protein 2-like 13 20106978 20108687 - 30032202 116914973 MODEL JAAIVD010000008;XM_032919380 XP_032775271 protein-coding 625853215 P2ry14 purinergic receptor P2Y14 INVOLVED IN hematopoietic stem cell homeostasis (ortholog); immune response (ortholog); ASSOCIATED WITH COVID-19 (ortholog) 3 95779623 95795507 + 22301074;30032202 116896840 MODEL JAAIVD010000012;XM_032898345 XP_032754236 P2Y purinoceptor 14 protein-coding 625853221 Arhgef37 Rho guanine nucleotide exchange factor 37 INVOLVED IN clathrin-dependent endocytosis (ortholog) 15 70408985 70455213 + 22301074 116884629 MODEL JAAIVD010000010;XM_032885770 XP_032741661 protein-coding 625853238 LOC116889513 U1 spliceosomal RNA X 34803634 34803740 + 116889513 MODEL JAAIVD010000014 pseudo 625853239 LOC116896071 voltage-dependent anion-selective channel protein 1-like 3 210351764 210352690 - 116896071 MODEL JAAIVD010000012 pseudo 625853240 Klhl13 kelch like family member 13 ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN protein ubiquitination (ortholog); regulation of cytokinesis (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog) X 99467684 99580480 - 30032202 116888666 MODEL JAAIVD010000014;XM_032889961;XM_032889962;XM_032889963;XM_032889964 XP_032745852;XP_032745853;XP_032745854;XP_032745855 kelch-like protein 13 protein-coding 625853260 LOC116883208 PDZ domain-containing protein 4-like 14 42170333 42175311 - 116883208 MODEL JAAIVD010000009 pseudo 625853261 LOC116895922 hornerin-like 3 121301401 121354906 - 22301074;30032202 116895922 MODEL JAAIVD010000012;XM_032896997 XP_032752888 protein-coding 625853272 Trappc4 trafficking protein particle complex subunit 4 INVOLVED IN autophagy (ortholog); dendrite development (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Neurodevelopmental Disorder with Epilepsy, Spasticity, and Brain Atrophy (ortholog); Neurodevelopmental Disorder with Progressive Microcephaly, Spasticity, and Brain Anomalies (ortholog); FOUND IN dendrite (ortholog); Golgi stack (ortholog); postsynaptic density membrane (ortholog) 8 38951190 38954420 - 22301074;30032202 116906583 MODEL JAAIVD010000027;XM_032909320;XM_032909321;XM_032909322 XP_032765211;XP_032765212;XP_032765213 trafficking protein particle complex 4 protein-coding 625853287 LOC116908463 U6 spliceosomal RNA 8 51594958 51595064 - 116908463 MODEL JAAIVD010000027;XR_004388981 snrna 625853290 Hsdl1 hydroxysteroid dehydrogenase like 1 ENCODES a protein that exhibits steroid dehydrogenase activity (ortholog); FOUND IN mitochondrion (ortholog) 17 39206759 39222598 - 116886317 MODEL JAAIVD010000011;XM_032887759 XP_032743650 inactive hydroxysteroid dehydrogenase-like protein 1 protein-coding 625853299 Gng13 G protein subunit gamma 13 ENCODES a protein that exhibits G-protein beta-subunit binding (ortholog); INVOLVED IN phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); sensory perception of taste (ortholog); FOUND IN dendrite (ortholog); heterotrimeric G-protein complex (ortholog); synapse (ortholog) 9 2982589 2984547 + 30032202 116909887 MODEL JAAIVD010000002;XM_032913626;XM_032913627 XP_032769517;XP_032769518 guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-13 protein-coding 625853309 Pla2g4c phospholipase A2 group IVC ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); O-acyltransferase activity (ortholog); phosphatidylcholine lysophospholipase A1 activity (ortholog); INVOLVED IN glycerophospholipid catabolic process (ortholog); lipid droplet formation (ortholog); phosphatidylcholine acyl-chain remodeling (ortholog); FOUND IN cell cortex (ortholog); endoplasmic reticulum membrane (ortholog); lipid droplet (ortholog) 2 173654632 173689152 - 30032202 116893411 MODEL JAAIVD010000001;XM_032895193 XP_032751084 cytosolic phospholipase A2 gamma protein-coding 625853327 LOC116904556 killer cell lectin-like receptor subfamily I member 2 6 17843819 17852397 + 30032202 116904556 MODEL JAAIVD010000024;XM_032907351 XP_032763242 protein-coding 625853336 LOC116897506 small nucleolar RNA SNORA44 3 181798500 181798604 + 116897506 MODEL JAAIVD010000012;XR_004387526 snorna 625853339 LOC116890115 uncharacterized LOC116890115 1 237055160 237118380 - 116890115 MODEL JAAIVD010000025;XR_004386529 ncrna 625853347 Mknk2 MAPK interacting serine/threonine kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to arsenic-containing substance (ortholog); extrinsic apoptotic signaling pathway in absence of ligand (ortholog); hemopoiesis (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; the extracellular signal-regulated Raf/Mek/Erk signaling pathway; FOUND IN cytosol (ortholog); nuclear body (ortholog) 1 154209863 154220813 + 22301074;30032202 116904951 MODEL JAAIVD010000025;XM_032907606 XP_032763497 MAP kinase-interacting serine/threonine-protein kinase 2 protein-coding 625853365 Tmem156 transmembrane protein 156 11 22071704 22100003 - 116912402 MODEL JAAIVD010000006;XM_032916461;XM_032916462 XP_032772352;XP_032772353 protein-coding 625853379 LOC116889025 rab proteins geranylgeranyltransferase component A 1-like X 70459226 70519352 + 22301074;30032202 116889025 MODEL JAAIVD010000014;XM_032890228 XP_032746119 protein-coding 625853387 Senp5 SUMO specific peptidase 5 ENCODES a protein that exhibits SUMO-specific endopeptidase activity (ortholog); FOUND IN postsynaptic cytosol (ortholog); presynaptic cytosol (ortholog) 4 16798672 16831091 - 30032202 116898763 MODEL JAAIVD010000003;XM_032900090;XM_032900091;XM_032900092 XP_032755981;XP_032755982;XP_032755983 sentrin-specific protease 5 protein-coding 625853406 LOC116889309 testin-like X 98701242 98714872 - 22301074 116889309 MODEL JAAIVD010000014;XM_032890429 XP_032746320 protein-coding 625853412 Gpc6 glypican 6 INVOLVED IN cell migration (ortholog); regulation of neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH Congenital Limb Deformities (ortholog); Congenital Micromelic Dysplasia with Dislocation of Radius (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN glutamatergic synapse (ortholog); synapse (ortholog) 12 7971376 8990482 - 22301074;30032202 116913395 MODEL JAAIVD010000007;XM_032917577;XM_032917578 XP_032773468;XP_032773469 glypican-6 protein-coding 625853427 LOC116913493 olfactory receptor 1537-like 12 159842 160889 - 22301074;30032202 116913493 MODEL JAAIVD010000007;XM_032917696 XP_032773587 protein-coding 625853431 Anxa5 annexin A5 ENCODES a protein that exhibits calcium-dependent phospholipid binding (ortholog); identical protein binding (ortholog); P-type calcium transporter activity (ortholog); INVOLVED IN cellular response to gonadotropin-releasing hormone (ortholog); cellular response to lead ion (ortholog); negative regulation of blood coagulation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); autoimmune disease of the nervous system (ortholog); FOUND IN axon terminus (ortholog); cell projection (ortholog); dendrite (ortholog) 3 117508000 117538898 + 22301074;30032202 116896930 MODEL JAAIVD010000012;XM_032898499 XP_032754390 protein-coding 625853448 LOC116886487 S-phase kinase-associated protein 1-like 17 33483948 33484999 - 116886487 MODEL JAAIVD010000011 pseudo 625853449 LOC116914832 uncharacterized LOC116914832 13 846377 853602 + 116914832 MODEL JAAIVD010000008;XR_004389775 ncrna 625853453 LOC116894326 gamma-aminobutyric acid receptor-associated protein-like 2 151547886 151548229 - 116894326 MODEL JAAIVD010000001 pseudo 625853454 LOC116895809 glyceraldehyde-3-phosphate dehydrogenase-like 3 68429052 68449014 + 116895809 MODEL JAAIVD010000012 pseudo 625853455 Cenpn centromere protein N FOUND IN nucleoplasm (ortholog) 17 36554115 36576191 + 22301074 116886335 MODEL JAAIVD010000011;XM_032887789 XP_032743680 protein-coding 625853471 Dclre1a DNA cross-link repair 1A ENCODES a protein that exhibits 5'-3' DNA exonuclease activity (ortholog); beta-lactamase activity (ortholog); INVOLVED IN nucleotide-excision repair (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) 2 59616555 59636268 + 30032202 116891332 MODEL JAAIVD010000001;XM_032892263 XP_032748154 DNA cross-link repair 1A protein protein-coding 625853485 Rsbn1l round spermatid basic protein 1 like ASSOCIATED WITH COVID-19 (ortholog); FOUND IN nuclear speck (ortholog) 6 150189268 150247339 - 30032202 116904167 MODEL JAAIVD010000024;XM_032907068;XM_032907069 XP_032762959;XP_032762960 lysine-specific demethylase RSBN1L protein-coding 625853501 Rassf6 Ras association domain family member 6 INVOLVED IN positive regulation of apoptotic process (ortholog); regulation of apoptotic process (ortholog) 11 4037995 4068917 - 22301074;30032202 116912352 MODEL JAAIVD010000006;XM_032916406 XP_032772297 ras association domain-containing protein 6 protein-coding 625853516 LOC116887917 uncharacterized LOC116887917 X 56870354 56871540 - 116887917 MODEL JAAIVD010000014 pseudo 625853517 LOC116909715 transmembrane protein 134-like 9 5162516 5163101 - 116909715 MODEL JAAIVD010000002 pseudo 625853518 Zbtb49 zinc finger and BTB domain containing 49 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); sequence-specific DNA binding (ortholog); transcription coactivator binding (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of cell cycle (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 11 66972040 66989407 + 22301074;30032202 116912403 MODEL JAAIVD010000006;XM_032916463 XP_032772354 zinc finger and BTB domain-containing protein 49 protein-coding 625853529 LOC116912580 actin, cytoplasmic 2-like 11 41323611 41324733 + 116912580 MODEL JAAIVD010000006 pseudo 625853530 LOC116885903 enoyl-CoA hydratase domain-containing protein 2, mitochondrial-like 16 16317733 16318431 + 116885903 MODEL JAAIVD010000004 pseudo 625853531 Acss2 acyl-CoA synthetase short chain family member 2 ENCODES a protein that exhibits acetyl-CoA synthetase activity (ortholog); chromatin binding (ortholog); propionate-CoA ligase activity (ortholog); INVOLVED IN acetate biosynthetic process (ortholog); acetyl-CoA biosynthetic process (ortholog); ethanol catabolic process (ortholog); PARTICIPATES IN disulfiram pharmacodynamics pathway; fatty acid beta degradation pathway; Leigh disease pathway; ASSOCIATED WITH Experimental Melanoma (ortholog); Inflammation (ortholog); lymphangioleiomyomatosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 5 134852118 134894795 + 30032202 116902178 MODEL JAAIVD010000023;XM_032904530;XM_032904532 XP_032760421;XP_032760423 acetyl-coenzyme A synthetase, cytoplasmic protein-coding 625853557 Bmx BMX non-receptor tyrosine kinase ENCODES a protein that exhibits non-membrane spanning protein tyrosine kinase activity (ortholog); INVOLVED IN signal transduction (ortholog); FOUND IN plasma membrane (ortholog); ruffle membrane (ortholog) X 24782440 24836964 - 22301074;30032202 116888544 MODEL JAAIVD010000014;XM_032889854 XP_032745745 cytoplasmic tyrosine-protein kinase BMX protein-coding 625853579 Tspan13 tetraspanin 13 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); INVOLVED IN regulation of calcium ion transmembrane transport (ortholog); FOUND IN plasma membrane (ortholog) 7 49274906 49302180 - 22301074;30032202 116904974 MODEL JAAIVD010000026;XM_032907655 XP_032763546 tetraspanin-13 protein-coding 625853589 Cdh3 cadherin 3 INVOLVED IN cell-cell adhesion (ortholog); hair cycle process (ortholog); hair follicle maturation (ortholog); ASSOCIATED WITH congenital hypotrichosis with juvenile macular dystrophy (ortholog); ectodermal dysplasia, ectrodactyly, and macular dystrophy syndrome (ortholog); exotropia (ortholog); FOUND IN adherens junction (ortholog); cell junction (ortholog); plasma membrane (ortholog) 17 26226310 26275076 + 22301074;30032202 116886523 MODEL JAAIVD010000011;XM_032888035 XP_032743926 cadherin-3 protein-coding 625853609 Tagln3 transgelin 3 INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleus (ortholog); synapse (ortholog) 4 30433746 30447472 - 22301074 116898880 MODEL JAAIVD010000003;XM_032900252 XP_032756143 transgelin-3 protein-coding 625853618 LOC116904188 uncharacterized LOC116904188 6 152070746 152085920 + 116904188 MODEL JAAIVD010000024;XR_004388334 ncrna 625853623 Ctse cathepsin E ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); identical protein binding (ortholog); peptidase activity (ortholog); INVOLVED IN antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); protein autoprocessing (ortholog); proteolysis (ortholog); ASSOCIATED WITH atopic dermatitis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN endosome (ortholog) 10 4162770 4185596 - 22301074;30032202;7574663 116911539 MODEL D45187;JAAIVD010000005;XM_032915527 BAA08128;XP_032771418 protein-coding 625853637 LOC116894854 U6 spliceosomal RNA 2 30347687 30347794 - 116894854 MODEL JAAIVD010000001;XR_004387069 snrna 625853640 Ppp2cb protein phosphatase 2 catalytic subunit beta ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of gene expression (ortholog); PARTICIPATES IN dopamine signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; FOUND IN cytoplasm (ortholog); FAR/SIN/STRIPAK complex (ortholog); nucleoplasm (ortholog) 13 53395935 53417240 - 2554256;30032202 116914483 MODEL JAAIVD010000008;X16044;XM_032918794 CAA34167;XP_032774685 serine/threonine-protein phosphatase 2A catalytic subunit beta isoform protein-coding 625853651 LOC116907336 olfactory receptor 7E24-like 8 15458259 15459213 + 116907336 MODEL JAAIVD010000027 pseudo 625853652 Rassf7 Ras association domain family member 7 FOUND IN centriolar satellite (ortholog) 2 8259572 8262371 - 22301074 116890882 MODEL JAAIVD010000001;XM_032891486;XM_032891487 XP_032747377;XP_032747378 ras association domain-containing protein 7 protein-coding 625853665 Dnttip1 deoxynucleotidyltransferase terminal interacting protein 1 ENCODES a protein that exhibits DNA binding (ortholog); nucleosome binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN chromatin organization (ortholog); FOUND IN chromosome (ortholog); histone deacetylase complex (ortholog); nucleolus (ortholog) 5 153189283 153212729 - 22301074;30032202 116902353 MODEL JAAIVD010000023;XM_032904839 XP_032760730 deoxynucleotidyltransferase terminal-interacting protein 1 protein-coding 625853682 LOC116895787 60S ribosomal protein L21-like 3 55535390 55535862 + 116895787 MODEL JAAIVD010000012 pseudo 625853683 Tmem67 transmembrane protein 67 ENCODES a protein that exhibits filamin binding (ortholog); misfolded protein binding (ortholog); unfolded protein binding (ortholog); INVOLVED IN branching morphogenesis of an epithelial tube (ortholog); cilium assembly (ortholog); determination of left/right symmetry (ortholog); PARTICIPATES IN Wnt signaling, non-canonical pathway; ASSOCIATED WITH atypical hemolytic-uremic syndrome (ortholog); autosomal recessive polycystic kidney disease (ortholog); Bardet-Biedl syndrome (ortholog); FOUND IN axoneme (ortholog); centrosome (ortholog); ciliary membrane (ortholog) 1 131445491 131499534 + 22301074;30032202 116903334 MODEL JAAIVD010000025;XM_032905782 XP_032761673 meckelin protein-coding 625853715 LOC116889275 protein tyrosine phosphatase type IVA 1-like X 103637529 103638061 - 22301074;30032202 116889275 MODEL JAAIVD010000014;XM_032890416;XM_032890417 XP_032746307;XP_032746308 protein-coding 625853723 LOC116888999 uncharacterized LOC116888999 X 88105763 88109964 - 116888999 MODEL JAAIVD010000014;XR_004386359 ncrna 625853727 LOC116887698 uncharacterized LOC116887698 18 13054824 13441604 - 116887698 MODEL JAAIVD010000013;XR_004386232 ncrna 625853732 Hddc2 HD domain containing 2 2 205404848 205425481 + 30032202 116892930 MODEL JAAIVD010000001;XM_032894866 XP_032750757 HD domain-containing protein 2 protein-coding 625853742 Mgam maltase-glucoamylase ENCODES a protein that exhibits alpha-1,4-glucosidase activity (ortholog); amylase activity (ortholog); INVOLVED IN dextrin catabolic process (ortholog); maltose catabolic process (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; glycogen storage disease type III pathway; glycogen storage disease type IV pathway; FOUND IN apical plasma membrane (ortholog) 6 41451559 41595343 + 22301074;30032202 116903448 MODEL JAAIVD010000024;XM_032906004 XP_032761895 maltase-glucoamylase, intestinal protein-coding 625853840 LOC116909851 cytochrome b-245 chaperone 1 INVOLVED IN calcium ion transport (ortholog); gene expression (ortholog); innate immune response (ortholog); ASSOCIATED WITH autosomal recessive chronic granulomatous disease 5 (ortholog); FOUND IN endoplasmic reticulum (ortholog) 9 62795198 62802115 + 116909851 MODEL JAAIVD010000002;XM_032913577 XP_032769468 protein-coding 625853851 LOC116894680 39S ribosomal protein L30, mitochondrial-like 2 210397826 210398359 + 22301074;30032202 116894680 MODEL JAAIVD010000001;XM_032896384 XP_032752275 protein-coding 625853855 LOC116892018 uncharacterized LOC116892018 2 137723396 137726464 + 116892018 MODEL JAAIVD010000001;XR_004386887;XR_004386888 ncrna 625853864 LOC116883311 spermatogenesis-associated protein 31D4-like 14 74620906 74624972 - 116883311 MODEL JAAIVD010000009;XM_032884364 XP_032740255 protein-coding 625853870 Dzank1 double zinc ribbon and ankyrin repeat domains 1 FOUND IN centrosome (ortholog) 5 124121779 124169742 - 22301074;30032202 116902046 MODEL JAAIVD010000023;XM_032904331 XP_032760222 double zinc ribbon and ankyrin repeat-containing protein 1 protein-coding 625853895 Sh2d4a SH2 domain containing 4A ENCODES a protein that exhibits phosphatase binding (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 13 21038619 21100994 - 30032202 116914667 MODEL JAAIVD010000008;XM_032919072 XP_032774963 SH2 domain-containing protein 4A protein-coding 625853908 Cep85l centrosomal protein 85L INVOLVED IN neuron migration (ortholog); ASSOCIATED WITH genetic disease (ortholog); lissencephaly (ortholog); lissencephaly 10 (ortholog); FOUND IN pericentriolar material (ortholog) 18 30197065 30352800 - 30032202 116886846 MODEL JAAIVD010000013;XM_032888299 XP_032744190 centrosomal protein 85 like;centrosomal protein of 85 kDa-like protein-coding 625853925 Znf668 zinc finger protein 668 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN DNA repair (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Ependymomas (ortholog); Failure to Thrive (ortholog); microcephaly (ortholog) 2 74030152 74039491 + 30032202 116891452 MODEL JAAIVD010000001;XM_032892522;XM_032892523;XM_032892524;XM_032892525 XP_032748413;XP_032748414;XP_032748415;XP_032748416 protein-coding 625853941 Cxxc5 CXXC finger protein 5 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); methyl-CpG binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); regulation of generation of precursor metabolites and energy (ortholog); FOUND IN nucleoplasm (ortholog) 15 8517711 8548880 - 22301074;30032202 116884515 MODEL JAAIVD010000010;XM_032885644;XM_032885645;XM_032885646;XM_032885647 XP_032741535;XP_032741536;XP_032741537;XP_032741538 CXXC-type zinc finger protein 5 protein-coding 625853960 LOC116895478 ferritin light chain 1-like 3 94682307 94682856 - 116895478 MODEL JAAIVD010000012 pseudo 625853961 Angptl3 angiopoietin like 3 ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); growth factor activity (ortholog); integrin binding (ortholog); INVOLVED IN acylglycerol homeostasis (ortholog); artery morphogenesis (ortholog); cell-matrix adhesion (ortholog); PARTICIPATES IN lipid metabolic pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); Experimental Liver Cirrhosis (ortholog); familial hypobetalipoproteinemia 2 (ortholog); FOUND IN cell surface (ortholog); early endosome (ortholog); extracellular region (ortholog) 1 55476089 55484222 - 30032202 116899975 MODEL JAAIVD010000025;XM_032901796 XP_032757687 angiopoietin-related protein 3 protein-coding 625853972 Dgke diacylglycerol kinase epsilon ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); kinase activity (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); lipid phosphorylation (ortholog); modulation of chemical synaptic transmission (ortholog); ASSOCIATED WITH atypical hemolytic-uremic syndrome (ortholog); genetic disease (ortholog); hemolytic-uremic syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) 9 81736235 81756673 + 22301074;30032202 116910191 MODEL JAAIVD010000002;XM_032914054 XP_032769945 protein-coding 625853987 LOC116884471 multifunctional methyltransferase subunit TRM112-like protein 15 63021075 63021442 + 116884471 MODEL JAAIVD010000010 pseudo 625853988 Cul3 cullin 3 ENCODES a protein that exhibits cyclin binding (ortholog); identical protein binding (ortholog); Notch binding (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); cell migration (ortholog); cell morphogenesis (ortholog); PARTICIPATES IN nuclear factor, erythroid 2 like 2 signaling pathway; proteasome degradation pathway involving cullin-dependent ubiquitin ligases; Wnt signaling, canonical pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal dominant pseudohypoaldosteronism type 1 (ortholog); developmental and epileptic encephalopathy 11 (ortholog); FOUND IN centrosome (ortholog); Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) 4 153303041 153377377 - 22301074;30032202 116899554 MODEL JAAIVD010000003;XM_032901449;XM_032901450;XM_032901451 XP_032757340;XP_032757341;XP_032757342 cullin-3 protein-coding 625854015 LOC116886547 C-terminal-binding protein 2-like 17 12564954 12566265 + 116886547 MODEL JAAIVD010000011 pseudo 625854016 LOC116908221 olfactory receptor 7G2-like 8 75765264 75766194 + 116908221 MODEL JAAIVD010000027 pseudo 625854017 Plppr3 phospholipid phosphatase related 3 1 154998152 155012709 + 30032202 116905562 MODEL JAAIVD010000025;XM_032908587;XM_032908589 XP_032764478;XP_032764480 phospholipid phosphatase-related protein type 3 protein-coding 625854035 Tmbim6 transmembrane BAX inhibitor motif containing 6 ENCODES a protein that exhibits endoribonuclease inhibitor activity (ortholog); enzyme binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to unfolded protein (ortholog); endoplasmic reticulum calcium ion homeostasis (ortholog); intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (ortholog); ASSOCIATED WITH cervical squamous cell carcinoma (ortholog); invasive ductal carcinoma (ortholog); prostate carcinoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 1 272195086 272212542 + 30032202 116885140 MODEL JAAIVD010000025;XM_032886328;XM_032886337 XP_032742219;XP_032742228 bax inhibitor 1 protein-coding 625854052 LOC116907261 N-alpha-acetyltransferase 11-like 8 14435167 14435771 - 116907261 MODEL JAAIVD010000027 pseudo 625854053 LOC116887595 mucin-21-like 18 8838096 8851292 - 116887595 MODEL JAAIVD010000013;XM_032889217 XP_032745108 protein-coding 625854060 Gpr18 G protein-coupled receptor 18 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN CD8-positive, alpha-beta intraepithelial T cell differentiation (ortholog); CD8-positive, gamma-delta intraepithelial T cell differentiation (ortholog); negative regulation of leukocyte chemotaxis (ortholog) 12 2980307 2984037 + 22301074;30032202 116914031 MODEL JAAIVD010000007;XM_032918300 XP_032774191 N-arachidonyl glycine receptor protein-coding 625854066 Fgb fibrinogen beta chain ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); protein-folding chaperone binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN blood coagulation, fibrin clot formation (ortholog); cell-matrix adhesion (ortholog); cellular response to interleukin-1 (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH cardiovascular system disease (ortholog); carotid artery disease (ortholog); congenital afibrinogenemia (ortholog); FOUND IN blood microparticle (ortholog); cell cortex (ortholog); cell surface (ortholog) 3 70469986 70477329 + 22301074;30032202 116896745 MODEL JAAIVD010000012;XM_032898184;XM_032898186;XM_032898187 XP_032754075;XP_032754077;XP_032754078 protein-coding 625854084 LOC116910920 olfactory receptor 6N1-like 10 52741271 52742321 + 116910920 MODEL JAAIVD010000005 pseudo 625854085 LOC116894428 keratin-associated protein 20-2-like 2 158868187 158868345 + 116894428 MODEL JAAIVD010000001;XM_032896133 XP_032752024 protein-coding 625854088 LOC116889503 small nucleolar RNA SNORA48 X 87397647 87397790 + 116889503 MODEL JAAIVD010000014;XR_004386449 snorna 625854091 LOC116902985 taste receptor type 2 member 41 6 97773965 97774891 - 22301074;30032202 116902985 MODEL JAAIVD010000024;XM_032905304 XP_032761195 protein-coding 625854094 Ctbp1 C-terminal binding protein 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); Notch signaling pathway (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); genetic disease (ortholog); HYPOTONIA, ATAXIA, DEVELOPMENTAL DELAY, AND TOOTH ENAMEL DEFECT SYNDROME (ortholog); FOUND IN cytoplasm (ortholog); extrinsic component of presynaptic endocytic zone membrane (ortholog); GABA-ergic synapse (ortholog) 11 71565492 71593052 + 22301074 116912091 MODEL JAAIVD010000006;XM_032915977;XM_032915978;XM_032915979;XM_032915980;XM_032915981;XM_032915982 XP_032771868;XP_032771869;XP_032771870;XP_032771871;XP_032771872;XP_032771873 C-terminal-binding protein 1 protein-coding 625854122 LOC116898398 potassium channel subfamily K member 16-like 4 80008022 80011656 - 116898398 MODEL JAAIVD010000003 pseudo 625854123 LOC116887371 60S ribosomal protein L9-like 18 12548684 12549261 + 116887371 MODEL JAAIVD010000013 pseudo 625854124 Myoz2 myozenin 2 ENCODES a protein that exhibits actin binding (ortholog); telethonin binding (ortholog); INVOLVED IN negative regulation of calcineurin-NFAT signaling cascade (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); sarcomere organization (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); familial hypertrophic cardiomyopathy (ortholog); hypertrophic cardiomyopathy (ortholog); FOUND IN actin cytoskeleton (ortholog); Z disc (ortholog) 3 36785360 36812528 + 22301074;30032202 116895333 MODEL JAAIVD010000012;XM_032896641 XP_032752532 myozenin-2 protein-coding 625854134 Trmt61a tRNA methyltransferase 61A ENCODES a protein that exhibits mRNA (adenine-N1-)-methyltransferase activity (ortholog); INVOLVED IN mRNA processing (ortholog); ASSOCIATED WITH Cornelia de Lange syndrome (ortholog) 7 129273599 129279753 + 22301074;30032202 116905496 MODEL JAAIVD010000026;XM_032908501 XP_032764392 tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A protein-coding 625854141 Cers4 ceramide synthase 4 ENCODES a protein that exhibits sphingosine N-acyltransferase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); sphingolipid biosynthetic process (ortholog); FOUND IN endoplasmic reticulum (ortholog); nucleoplasm (ortholog) 16 2640315 2673277 + 22301074;30032202 116885189 MODEL JAAIVD010000004;XM_032886406 XP_032742297 protein-coding 625854157 LOC116913163 uncharacterized LOC116913163 12 47141672 47268598 - 116913163 MODEL JAAIVD010000007;XM_032917369 XP_032773260 uncharacterized protein LOC116913163 protein-coding 625854162 Ptrh1 peptidyl-tRNA hydrolase 1 homolog ENCODES a protein that exhibits peptidyl-tRNA hydrolase activity (ortholog); INVOLVED IN rescue of stalled cytosolic ribosome (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN mitochondrion (ortholog) 5 2858813 2865811 - 22301074;30032202 116901134 MODEL JAAIVD010000023;XM_032902733;XM_032902735 XP_032758624;XP_032758626 probable peptidyl-tRNA hydrolase protein-coding 625854175 Tp53i11 tumor protein p53 inducible protein 11 5 67364975 67370560 + 116901649 MODEL JAAIVD010000023;XM_032903756;XM_032903757;XM_032903758 XP_032759647;XP_032759648;XP_032759649 tumor protein p53-inducible protein 11 protein-coding 625854193 LOC116906595 uncharacterized LOC116906595 8 63002204 63002548 + 116906595 MODEL JAAIVD010000027;XR_004388753 ncrna 625854197 Fndc1 fibronectin type III domain containing 1 INVOLVED IN cellular response to hypoxia (ortholog); positive regulation of cardiac muscle cell apoptotic process (ortholog); positive regulation of protein phosphorylation (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); mitochondrial membrane (ortholog) 2 192027132 192090463 - 22301074 116892842 MODEL JAAIVD010000001;XM_032894731 XP_032750622 fibronectin type III domain-containing protein 1 protein-coding 625854221 Sergef secretion regulating guanine nucleotide exchange factor INVOLVED IN negative regulation of protein secretion (ortholog); ASSOCIATED WITH atherosclerosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 2 152732496 152929609 + 116892102 MODEL JAAIVD010000001;XM_032893580 XP_032749471 secretion-regulating guanine nucleotide exchange factor protein-coding 625854235 LOC116910297 pancreatic progenitor cell differentiation and proliferation factor-like 9 46875804 46876231 - 116910297 MODEL JAAIVD010000002 pseudo 625854236 Dsg1 desmoglein 1 ENCODES a protein that exhibits gamma-catenin binding (ortholog); INVOLVED IN cellular response to UV-B (ortholog); epithelial cell-cell adhesion (ortholog); maternal process involved in female pregnancy (ortholog); ASSOCIATED WITH allergic disease (ortholog); Chronic Periodontitis (ortholog); Congenital Erythroderma with Palmoplantar Keratoderma, Hypotrichosis, and Hyper-IgE (ortholog); FOUND IN apical plasma membrane (ortholog); cell junction (ortholog); cell-cell junction (ortholog) 15 23246762 23276209 - 22301074;30032202 116884817 MODEL JAAIVD010000010;XM_032886045;XM_032886046;XM_032886048 XP_032741936;XP_032741937;XP_032741939 desmoglein-1 protein-coding 625854261 LOC116912707 uncharacterized LOC116912707 11 19782163 19847066 - 116912707 MODEL JAAIVD010000006 pseudo 625854262 B4gat1 beta-1,4-glucuronyltransferase 1 ENCODES a protein that exhibits glucuronosyltransferase activity (ortholog); N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN axon guidance (ortholog); glycoprotein biosynthetic process (ortholog); poly-N-acetyllactosamine biosynthetic process (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); congenital muscular dystrophy-dystroglycanopathy type A1 (ortholog); congenital muscular dystrophy-dystroglycanopathy type A13 (ortholog); FOUND IN Golgi apparatus (ortholog) 2 2612457 2615292 - 30032202 116890745 MODEL JAAIVD010000001;XM_032891201 XP_032747092 protein-coding 625854268 Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif 13 ENCODES a protein that exhibits endopeptidase activity (ortholog); metalloendopeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN cellular response to interleukin-4 (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH atypical hemolytic-uremic syndrome (ortholog); autoimmune thrombocytopenic purpura (ortholog); cholestasis (ortholog); FOUND IN extracellular region (ortholog) 5 9646535 9683169 - 22301074;30032202 116901245 MODEL JAAIVD010000023;XM_032902995;XM_032902996 XP_032758886;XP_032758887 A disintegrin and metalloproteinase with thrombospondin motifs 13 protein-coding 625854301 Kctd14 potassium channel tetramerization domain containing 14 2 95769536 95774731 + 22301074 116891697 MODEL JAAIVD010000001;XM_032892964 XP_032748855 BTB/POZ domain-containing protein KCTD14 protein-coding 625854307 LOC116888179 high mobility group protein B4-like X 118046411 118046911 - 116888179 MODEL JAAIVD010000014 pseudo 625854308 Gramd4 GRAM domain containing 4 INVOLVED IN negative regulation of toll-like receptor 9 signaling pathway (ortholog); positive regulation of apoptotic process (ortholog); FOUND IN mitochondrion (ortholog) 1 255438325 255481269 + 30032202 116914750 MODEL JAAIVD010000025;XM_032919201 XP_032775092 GRAM domain-containing protein 4 protein-coding 625854330 LOC116904429 ATP-dependent RNA helicase DDX50-like 6 116440701 116441953 - 116904429 MODEL JAAIVD010000024 pseudo 625854331 Satl1 spermidine/spermine N1-acetyl transferase like 1 X 62204183 62217199 - 30032202 116888591 MODEL JAAIVD010000014;XM_032889890 XP_032745781 spermidine/spermine N(1)-acetyltransferase-like protein 1 protein-coding 625854340 LOC116890264 zinc finger protein 25-like 1 13390153 13408607 + 30032202 116890264 MODEL JAAIVD010000025;XM_032890985 XP_032746876 protein-coding 625854348 Fzd2 frizzled class receptor 2 ENCODES a protein that exhibits identical protein binding (ortholog); PDZ domain binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cell-cell signaling (ortholog); cellular response to growth factor stimulus (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, non-canonical pathway; ASSOCIATED WITH autosomal dominant Robinow syndrome 1 (ortholog); autosomal dominant Robinow syndrome 2 (ortholog); autosomal dominant Robinow syndrome 3 (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) 9 61900270 61902432 + 30032202 116909973 MODEL JAAIVD010000002;XM_032913751 XP_032769642 frizzled-2 protein-coding 625854353 LOC116911293 eukaryotic elongation factor 2 kinase-like 10 84948890 84951054 + 116911293 MODEL JAAIVD010000005 pseudo 625854354 Cracdl CRACD like 4 113803537 113862268 - 116899301 MODEL JAAIVD010000003;XM_032900957;XM_032900958 XP_032756848;XP_032756849 uncharacterized protein KIAA1211-like homolog protein-coding 625854372 LOC116912800 60S ribosomal protein L23a-like 11 51714937 51715459 + 22301074;30032202 116912800 MODEL JAAIVD010000006;XM_032916963 XP_032772854 protein-coding 625854376 Nav2 neuron navigator 2 ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); heparin binding (ortholog); INVOLVED IN glossopharyngeal nerve development (ortholog); locomotory behavior (ortholog); nervous system development (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Hirschsprung's disease (ortholog); FOUND IN extracellular matrix (ortholog); interstitial matrix (ortholog); nucleoplasm (ortholog) 2 150233279 150601338 - 22301074;30032202 116892073 MODEL JAAIVD010000001;XM_032893544;XM_032893545;XM_032893546 XP_032749435;XP_032749436;XP_032749437 protein-coding 625854424 Chmp1a charged multivesicular body protein 1A ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); cell division (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); pontocerebellar hypoplasia (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); condensed nuclear chromosome (ortholog) 17 42809699 42817381 - 30032202 116886132 MODEL JAAIVD010000011;XM_032887474;XM_032887475 XP_032743365;XP_032743366 protein-coding 625854439 Nlrp9 NLR family pyrin domain containing 9 INVOLVED IN blastocyst development (ortholog); defense response to virus (ortholog); innate immune response (ortholog); ASSOCIATED WITH congenital stationary night blindness (ortholog); FOUND IN canonical inflammasome complex (ortholog) 2 180253555 180291942 + 30032202 116894577 MODEL JAAIVD010000001;XM_032896299;XM_032896300 XP_032752190;XP_032752191 NACHT, LRR and PYD domains-containing protein 9 protein-coding 625854451 LOC116904163 bromodomain-containing protein 4-like 6 149700739 149703624 - 22301074 116904163 MODEL JAAIVD010000024;XM_032907060 XP_032762951 protein-coding 625854457 LOC116889961 olfactory receptor 6C2-like 1 161928876 161929795 - 116889961 MODEL JAAIVD010000025 pseudo 625854458 Cdh11 cadherin 11 INVOLVED IN aortic valve formation (ortholog); cell migration (ortholog); cell-substrate adhesion (ortholog); ASSOCIATED WITH Elsahy-Waters syndrome (ortholog); genetic disease (ortholog); Moebius syndrome (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) 17 10994489 11149179 - 22301074;30032202 116886122 MODEL JAAIVD010000011;XM_032887461;XM_032887462 XP_032743352;XP_032743353 cadherin-11 protein-coding 625854478 LOC116913548 60S ribosomal protein L23a-like 12 61390029 61390568 - 22301074;30032202 116913548 MODEL JAAIVD010000007;XM_032917755 XP_032773646 protein-coding 625854483 LOC116892753 vomeronasal type-1 receptor 2-like 2 181036995 181037924 - 22301074;30032202 116892753 MODEL JAAIVD010000001;XM_032894631 XP_032750522 protein-coding 625854487 Tmem38a transmembrane protein 38A ENCODES a protein that exhibits identical protein binding (ortholog); potassium channel activity (ortholog); INVOLVED IN cellular response to caffeine (ortholog); endoplasmic reticulum organization (ortholog); potassium ion transmembrane transport (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN nuclear membrane (ortholog); sarcoplasmic reticulum (ortholog) 13 14389077 14405313 + 22301074;30032202 116914440 MODEL JAAIVD010000008;XM_032918739 XP_032774630 trimeric intracellular cation channel type A protein-coding 625854497 Adgrv1 adhesion G protein-coupled receptor V1 ENCODES a protein that exhibits adenylate cyclase inhibitor activity (ortholog); calcium ion binding (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); detection of mechanical stimulus involved in sensory perception of sound (ortholog); establishment of protein localization (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH arteriovenous malformations of the brain (ortholog); autosomal recessive nonsyndromic deafness (ortholog); beta-mannosidosis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); periciliary membrane compartment (ortholog) 3 214774131 214855522 + 22301074;30032202 116897338 MODEL JAAIVD010000012;XM_032899093 XP_032754984 adhesion G-protein coupled receptor V1 protein-coding 625854540 LOC116900018 salivary lipocalin-like 5 11319914 11328504 - 30032202 116900018 MODEL JAAIVD010000023;XM_032901816 XP_032757707 protein-coding 625854548 Lrig2 leucine rich repeats and immunoglobulin like domains 2 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN innervation (ortholog); negative regulation of axon regeneration (ortholog); negative regulation of membrane protein ectodomain proteolysis (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); urofacial syndrome (ortholog); Urofacial Syndrome 2 (ortholog); FOUND IN growth cone (ortholog); intracellular vesicle (ortholog); membrane (ortholog) 3 53595598 53653480 + 22301074 116896433 MODEL JAAIVD010000012;XM_032897582;XM_032897583 XP_032753473;XP_032753474 leucine-rich repeats and immunoglobulin-like domains protein 2 protein-coding 625854572 LOC116889381 probable peptide chain release factor C12orf65 homolog, mitochondrial X 62755138 62755672 - 116889381 MODEL JAAIVD010000014 pseudo 625854573 Atp8b2 ATPase phospholipid transporting 8B2 ENCODES a protein that exhibits phosphatidylcholine flippase activity (ortholog); FOUND IN Golgi apparatus (ortholog); plasma membrane (ortholog) 3 63684545 63707839 + 22301074;30032202 116896629 MODEL JAAIVD010000012;XM_032897939 XP_032753830 phospholipid-transporting ATPase ID protein-coding 625854605 Cavin1 caveolae associated protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); rRNA primary transcript binding (ortholog); INVOLVED IN positive regulation of cell motility (ortholog); protein secretion (ortholog); rRNA transcription (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH congenital generalized lipodystrophy (ortholog); congenital generalized lipodystrophy type 4 (ortholog); diabetes mellitus (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) 9 60248354 60262130 - 30032202 116909615 MODEL JAAIVD010000002;XM_032913239;XM_032913240 XP_032769130;XP_032769131 caveolae-associated protein 1 protein-coding 625854613 Pex11b peroxisomal biogenesis factor 11 beta ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN peroxisome fission (ortholog); peroxisome organization (ortholog); regulation of peroxisome size (ortholog); ASSOCIATED WITH cataract (ortholog); genetic disease (ortholog); infantile Refsum disease (ortholog); FOUND IN mitochondrion (ortholog); peroxisomal membrane (ortholog); peroxisome (ortholog) 3 60660450 60669638 - 22301074;30032202 116896504 MODEL JAAIVD010000012;XM_032897680 XP_032753571 peroxisomal membrane protein 11B protein-coding 625854621 Ankrd11 ankyrin repeat domain containing 11 ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN bone development (ortholog); cardiac neural crest cell differentiation involved in heart development (ortholog); cell migration (ortholog); ASSOCIATED WITH astigmatism (ortholog); autism spectrum disorder (ortholog); Developmental Disabilities (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 17 42514178 42667399 - 22301074;30032202 116886157 MODEL JAAIVD010000011;XM_032887524;XM_032887525;XM_032887526 XP_032743415;XP_032743416;XP_032743417 ankyrin repeat domain 11;ankyrin repeat domain-containing protein 11 protein-coding 625854644 Trnak-cuu transfer RNA lysine (anticodon CUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 171622537 171622609 - 116895151 MODEL JAAIVD010000001 trna 625854645 Psma3 proteasome 20S subunit alpha 3 ENCODES a protein that exhibits structural constituent of proteasome (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN proteasomal protein catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); regulation of proteasomal protein catabolic process (ortholog); ASSOCIATED WITH proteasome-associated autoinflammatory syndrome 1 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); proteasome complex (ortholog) 7 84633037 84653290 + 22301074;2249692;2403356;30032202 116905137 MODEL D90258;JAAIVD010000026;X55985;XM_032907899;XM_032907900 BAA14302;CAA39457;XP_032763790;XP_032763791 proteasome subunit alpha type-3 protein-coding 625854663 LOC116887633 olfactory receptor 2B11-like 18 11051508 11054883 + 116887633 MODEL JAAIVD010000013 pseudo 625854664 Ndfip2 Nedd4 family interacting protein 2 ENCODES a protein that exhibits WW domain binding (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) 12 19544514 19591176 - 22301074;30032202 116913332 MODEL JAAIVD010000007;XM_032917480 XP_032773371 NEDD4 family-interacting protein 2 protein-coding 625854676 Ccdc170 coiled-coil domain containing 170 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN microtubule cytoskeleton organization (ortholog); ASSOCIATED WITH Estrogen Resistance (ortholog); FOUND IN ciliary basal body (ortholog); Golgi apparatus (ortholog) 2 199234737 199337668 + 30032202 116893528 MODEL JAAIVD010000001;XM_032895254 XP_032751145 coiled-coil domain-containing protein 170 protein-coding 625854690 Mtf1 metal regulatory transcription factor 1 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cartilage homeostasis (ortholog); cellular response to zinc ion (ortholog); DNA-templated transcription (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 33451190 33493028 - 30032202 116896847 MODEL JAAIVD010000025;XM_032898356 XP_032754247 protein-coding 625854705 Stoml3 stomatin like 3 INVOLVED IN signal transduction (ortholog); FOUND IN cilium (ortholog); membrane raft (ortholog); plasma membrane (ortholog) 3 100935889 100952694 - 30032202 116895491 MODEL JAAIVD010000012;XM_032896749 XP_032752640 stomatin-like protein 3 protein-coding 625854716 LOC116885867 fructose-bisphosphate aldolase A-like 16 9349733 9351884 - 116885867 MODEL JAAIVD010000004 pseudo 625854717 Dtnb dystrobrevin beta ENCODES a protein that exhibits DNA binding (ortholog); phosphatase binding (ortholog); INVOLVED IN neuron differentiation (ortholog); FOUND IN cytoplasm (ortholog); GABA-ergic synapse (ortholog); inhibitory synapse (ortholog) 7 24255710 24448503 + 22301074;30032202 116906017 MODEL JAAIVD010000026;XM_032909065;XM_032909066;XM_032909067;XM_032909068;XM_032909069 XP_032764956;XP_032764957;XP_032764958;XP_032764959;XP_032764960 protein-coding 625854747 Snap23 synaptosome associated protein 23 ENCODES a protein that exhibits fusogenic activity (ortholog); SNAP receptor activity (ortholog); syntaxin binding (ortholog); INVOLVED IN cytotoxic T cell degranulation (ortholog); endosome to plasma membrane protein transport (ortholog); exocytic insertion of neurotransmitter receptor to postsynaptic membrane (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; vasopressin signaling pathway; vasopressin signaling pathway via receptor type 2; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Myocardial Ischemia (ortholog); FOUND IN adherens junction (ortholog); azurophil granule (ortholog); cytoplasm (ortholog) 5 98698534 98727185 + 30032202 116901839 MODEL JAAIVD010000023;XM_032904015;XM_032904016;XM_032904017;XM_032904018 XP_032759906;XP_032759907;XP_032759908;XP_032759909 synaptosomal-associated protein 23 protein-coding 625854769 LOC116904698 small nucleolar RNA SNORA48 6 87881862 87882001 - 116904698 MODEL JAAIVD010000024;XR_004388394 snorna 625854772 Wnt11 Wnt family member 11 ENCODES a protein that exhibits protein kinase activator activity (ortholog); INVOLVED IN adrenal gland development (ortholog); artery morphogenesis (ortholog); atrial septum development (ortholog); PARTICIPATES IN the Wnt/calcium signaling pathway; Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH Abnormalities, Drug-Induced (ortholog); Animal Disease Models (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) 2 97111938 97128000 + 22301074;30032202 116893956 MODEL JAAIVD010000001;XM_032895672;XM_032895673 XP_032751563;XP_032751564 protein Wnt-11 protein-coding 625854787 Sco1 synthesis of cytochrome C oxidase 1 INVOLVED IN copper ion homeostasis (ortholog); cyclooxygenase pathway (ortholog); gene expression (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); brain disease (ortholog); cytochrome-c oxidase deficiency disease (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); myofibril (ortholog) 9 46653958 46666425 + 30032202 116908886 MODEL JAAIVD010000002;XM_032912332 XP_032768223 LOC116908886 APPROVED protein-coding 625854797 Sin3b SIN3 transcription regulator family member B ENCODES a protein that exhibits chromatin binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN cardiac muscle tissue development (ortholog); negative regulation of DNA-templated transcription (ortholog); skeletal muscle tissue development (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN autosome (ortholog); cytoplasm (ortholog); nucleus (ortholog) 13 19766697 19810348 - 30032202 116914378 MODEL JAAIVD010000008;XM_032918583 XP_032774474 paired amphipathic helix protein Sin3b protein-coding 625854820 Imp3 IMP U3 small nucleolar ribonucleoprotein 3 INVOLVED IN ribosomal small subunit biogenesis (ortholog); rRNA processing (ortholog); PARTICIPATES IN ribosome biogenesis pathway; FOUND IN Mpp10 complex (ortholog); nucleolus (ortholog); nucleus (ortholog) 8 50845953 50846882 + 22301074;30032202 116907761 MODEL JAAIVD010000027;XM_032910899 XP_032766790 U3 small nucleolar ribonucleoprotein protein IMP3 protein-coding 625854825 Trnag-ucc transfer RNA glycine (anticodon UCC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 24758180 24758251 - 116897677 MODEL JAAIVD010000012 trna 625854826 LOC116903864 mitochondrial import receptor subunit TOM7 homolog 6 22490283 22493300 - 22301074 116903864 MODEL JAAIVD010000024;XM_032906612 XP_032762503 protein-coding 625854830 Atrnl1 attractin like 1 INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN melanocortin system pathway 2 58003148 58543337 - 22301074;30032202 116891322 MODEL JAAIVD010000001;XM_032892245;XM_032892246 XP_032748136;XP_032748137 attractin-like protein 1 protein-coding 625854867 Eif3b eukaryotic translation initiation factor 3 subunit B ENCODES a protein that exhibits RNA binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN IRES-dependent viral translational initiation (ortholog); regulation of translational initiation (ortholog); translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); FOUND IN cytoplasmic stress granule (ortholog); cytosol (ortholog); eukaryotic translation initiation factor 3 complex (ortholog) 16 12755739 12779051 - 22301074;30032202 116885407 MODEL JAAIVD010000004;XM_032886693 XP_032742584 protein-coding 625854890 Slit2 slit guidance ligand 2 ENCODES a protein that exhibits chemorepellent activity (ortholog); GTPase inhibitor activity (ortholog); heparan sulfate proteoglycan binding (ortholog); INVOLVED IN aortic valve morphogenesis (ortholog); apoptotic process involved in luteolysis (ortholog); axon extension involved in axon guidance (ortholog); PARTICIPATES IN glypican signaling pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); anti-basement membrane glomerulonephritis (ortholog); atrial fibrillation (ortholog); FOUND IN axon (ortholog); cell body (ortholog); cell projection (ortholog) 11 57665902 57993742 - 22301074;30032202 116912754 MODEL JAAIVD010000006;XM_032916900;XM_032916902;XM_032916903;XM_032916904 XP_032772791;XP_032772793;XP_032772794;XP_032772795 slit homolog 2 protein protein-coding 625854936 Tes testin LIM domain protein ENCODES a protein that exhibits zinc ion binding (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH breast cancer (ortholog); childhood acute lymphocytic leukemia (ortholog); colitis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); focal adhesion (ortholog) 6 121870830 121908820 - 22301074 116904063 MODEL JAAIVD010000024;XM_032906925 XP_032762816 testin protein-coding 625854947 Fam3c FAM3 metabolism regulating signaling molecule C ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN epidermal cell differentiation (ortholog); ERK1 and ERK2 cascade (ortholog); gene expression (ortholog); FOUND IN Golgi apparatus (ortholog) 6 116830686 116867838 + 30032202 116904044 MODEL JAAIVD010000024;XM_032906901 XP_032762792 protein FAM3C protein-coding 625854960 Dydc2 DPY30 domain containing 2 13 19573585 19587021 - 30032202 116915042 MODEL JAAIVD010000008;XM_032919446 XP_032775337 DPY30 domain-containing protein 2 protein-coding 625854967 LOC116908564 40S ribosomal protein S26-like 1 178250453 178250854 + 22301074;30032202 116908564 MODEL JAAIVD010000025;XM_032911771 XP_032767662 protein-coding 625854971 Ptges2 prostaglandin E synthase 2 ENCODES a protein that exhibits DNA binding (ortholog); lyase activity (ortholog); prostaglandin-E synthase activity (ortholog); INVOLVED IN cyclooxygenase pathway (ortholog); lipid metabolic process (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN prostaglandin biosynthetic pathway; type II interferon signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Carbon Tetrachloride Poisoning (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytosol (ortholog); Golgi membrane (ortholog); mitochondrion (ortholog) 5 3229844 3236980 - 22301074;30032202 116901147 MODEL JAAIVD010000023;XM_032902760 XP_032758651 protein-coding 625854982 Fndc3b fibronectin type III domain containing 3B INVOLVED IN cell migration (ortholog); negative regulation of osteoblast differentiation (ortholog); positive regulation of fat cell differentiation (ortholog); ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); keratoconus (ortholog); FOUND IN endoplasmic reticulum (ortholog) 3 126962291 127288290 + 22301074 116896988 MODEL JAAIVD010000012;XM_032898582 XP_032754473 fibronectin type III domain-containing protein 3B protein-coding 625855012 Ell2 elongation factor for RNA polymerase II 2 INVOLVED IN snRNA transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH COVID-19 (ortholog); FOUND IN nucleoplasm (ortholog); transcription elongation factor complex (ortholog) 3 222150379 222219159 + 22301074;30032202 116897366 MODEL JAAIVD010000012;XM_032899125;XM_032899126 XP_032755016;XP_032755017 RNA polymerase II elongation factor ELL2 protein-coding 625855031 Pgpep1l pyroglutamyl-peptidase I like 2 132098382 132104057 + 30032202 116893253 MODEL JAAIVD010000001;XM_032895114 XP_032751005 pyroglutamyl-peptidase 1-like protein protein-coding 625855037 Slc25a32 solute carrier family 25 member 32 ENCODES a protein that exhibits FAD transmembrane transporter activity (ortholog); INVOLVED IN mitochondrial FAD transmembrane transport (ortholog); PARTICIPATES IN folate cycle metabolic pathway; ASSOCIATED WITH Exercise Intolerance (ortholog); prostate cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 1 212066972 212082641 + 30032202 116910825 MODEL JAAIVD010000025;XM_032914591 XP_032770482 mitochondrial folate transporter/carrier protein-coding 625855048 LOC116893220 olfactory receptor 14C36-like 2 114692052 114701601 + 22301074;30032202 116893220 MODEL JAAIVD010000001;XM_032895102 XP_032750993 protein-coding 625855052 Psmd11 proteasome 26S subunit, non-ATPase 11 INVOLVED IN proteasome assembly (ortholog); regulation of AMPA receptor activity (ortholog); stem cell differentiation (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog); proteasome regulatory particle (ortholog) 9 89941889 89986053 - 22301074;30032202 116908706 MODEL JAAIVD010000002;XM_032912038 XP_032767929 26S proteasome non-ATPase regulatory subunit 11 protein-coding 625855070 Ankdd1b ankyrin repeat and death domain containing 1B 3 200032092 200096702 + 22301074 116895679 MODEL JAAIVD010000012;XM_032896882 XP_032752773 ankyrin repeat and death domain-containing protein 1B protein-coding 625855089 LOC116901116 40S ribosomal protein S7-like 5 1197189 1197754 + 116901116 MODEL JAAIVD010000023 pseudo 625855090 LOC116891372 40-kDa huntingtin-associated protein 2 63068479 63070225 - 22301074;30032202 116891372 MODEL JAAIVD010000001;XM_032892372 XP_032748263 protein-coding 625855095 LOC116893007 malate dehydrogenase, mitochondrial-like 1 13053571 13054880 + 116893007 MODEL JAAIVD010000025 pseudo 625855096 LOC116913751 triosephosphate isomerase-like 12 71342153 71342942 + 116913751 MODEL JAAIVD010000007 pseudo 625855097 Rptn repetin FOUND IN cornified envelope (ortholog) 3 121274536 121278776 - 22301074;30032202 116895549 MODEL JAAIVD010000012;XM_032896789 XP_032752680 protein-coding 625855102 LOC116884111 U6 spliceosomal RNA 14 42449945 42450051 - 116884111 MODEL JAAIVD010000009;XR_004385842 snrna 625855105 LOC116899393 uncharacterized LOC116899393 4 129621672 129623458 + 116899393 MODEL JAAIVD010000003;XR_004387725 ncrna 625855110 Fbxl15 F-box and leucine rich repeat protein 15 INVOLVED IN bone mineralization (ortholog); G2/M transition of mitotic cell cycle (ortholog); positive regulation of BMP signaling pathway (ortholog); FOUND IN cytoplasm (ortholog); SCF ubiquitin ligase complex (ortholog) 2 45789746 45792123 + 22301074 116891242 MODEL JAAIVD010000001;XM_032892110 XP_032748001 F-box/LRR-repeat protein 15 protein-coding 625855118 Ndrg3 NDRG family member 3 INVOLVED IN decidualization (ortholog); FOUND IN cytoplasm (ortholog) 5 136266784 136329042 - 30032202 116902213 MODEL JAAIVD010000023;XM_032904614 XP_032760505 protein NDRG3 protein-coding 625855139 LOC116910318 uncharacterized LOC116910318 9 52404586 52405618 - 116910318 MODEL JAAIVD010000002;XM_032914182 XP_032770073 uncharacterized protein LOC116910318 protein-coding 625855144 LOC116899599 intestinal-type alkaline phosphatase 1 4 159221593 159232688 - 30032202 116899599 MODEL JAAIVD010000003;XM_032901544;XM_032901545 XP_032757435;XP_032757436 alkaline phosphatase, germ cell type protein-coding 625855172 LOC116904704 small nucleolar RNA SNORA17 6 150860216 150860343 - 116904704 MODEL JAAIVD010000024;XR_004388399 snorna 625855175 Sgsm1 small G protein signaling modulator 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle membrane (ortholog); cytosol (ortholog) 16 40661018 40728262 + 22301074;30032202 116885161 MODEL JAAIVD010000004;XM_032886372;XM_032886373;XM_032886374;XM_032886375 XP_032742263;XP_032742264;XP_032742265;XP_032742266 protein-coding 625855213 LOC116914929 farnesyl pyrophosphate synthase-like 13 6417936 6449284 + 116914929 MODEL JAAIVD010000008 pseudo 625855214 LOC116914148 small nucleolar RNA SNORA17 12 18214388 18214471 - 116914148 MODEL JAAIVD010000007 pseudo 625855215 Ccnb3 cyclin B3 ASSOCIATED WITH autistic disorder (ortholog); Habitual Abortions (ortholog); osteosarcoma (ortholog); FOUND IN nucleoplasm (ortholog) X 15082728 15133698 + 30032202 116889237 MODEL JAAIVD010000014;XM_032890387 XP_032746278 G2/mitotic-specific cyclin-B3 protein-coding 625855230 Rb1 RB transcriptional corepressor 1 ENCODES a protein that exhibits disordered domain specific binding (ortholog); DNA-binding transcription factor binding (ortholog); enzyme binding (ortholog); INVOLVED IN aortic valve morphogenesis (ortholog); apoptotic process (ortholog); cell division (ortholog); PARTICIPATES IN ceramide signaling pathway; G1/S transition pathway; RNA polymerase III transcription pathway; ASSOCIATED WITH Acute Erythroleukemia (ortholog); acute kidney failure (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN cyclin/CDK positive transcription elongation factor complex (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 12 51063499 51215976 + 22301074;30032202 116913678 MODEL JAAIVD010000007;XM_032917967 XP_032773858 retinoblastoma-associated protein protein-coding 625855262 LOC116906216 Ig heavy chain V region PJ14-like 7 121373585 121374098 + 116906216 MODEL JAAIVD010000026 pseudo 625855263 LOC116904374 60S ribosomal protein L21-like 6 88985049 88985533 - 116904374 MODEL JAAIVD010000024 pseudo 625855264 Tesc tescalcin ENCODES a protein that exhibits calcium ion binding (ortholog); magnesium ion binding (ortholog); phosphatase inhibitor activity (ortholog); INVOLVED IN cellular response to retinoic acid (ortholog); male gonad development (ortholog); megakaryocyte development (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lamellipodium (ortholog) 16 35769878 35803187 - 22301074 116885721 MODEL JAAIVD010000004;XM_032887029 XP_032742920 calcineurin B homologous protein 3 protein-coding 625855276 Zdhhc21 zDHHC palmitoyltransferase 21 ENCODES a protein that exhibits palmitoyltransferase activity (ortholog); protein-cysteine S-palmitoyltransferase activity (ortholog); INVOLVED IN adrenergic receptor signaling pathway (ortholog); hair follicle development (ortholog); peptidyl-L-cysteine S-palmitoylation (ortholog); FOUND IN Golgi apparatus (ortholog); plasma membrane (ortholog) 1 70869582 70921113 + 30032202 116900682 MODEL JAAIVD010000025;XM_032902389;XM_032902394;XM_032902401 XP_032758280;XP_032758285;XP_032758292 palmitoyltransferase ZDHHC21;zinc finger DHHC-type palmitoyltransferase 21 protein-coding 625855293 Stxbp3 syntaxin binding protein 3 ENCODES a protein that exhibits protein-containing complex binding (ortholog); syntaxin binding (ortholog); syntaxin-1 binding (ortholog); INVOLVED IN brain development (ortholog); cellular response to type II interferon (ortholog); exocytosis (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; ASSOCIATED WITH IMMUNE DYSREGULATION, AUTOIMMUNITY, AND AUTOINFLAMMATION (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cytosol (ortholog) 3 49435758 49477023 + 22301074;30032202 116896354 MODEL JAAIVD010000012;XM_032897457 XP_032753348 syntaxin-binding protein 3 protein-coding 625855316 LOC116908330 U6 spliceosomal RNA 8 104992354 104992456 - 116908330 MODEL JAAIVD010000027;XR_004388886 snrna 625855319 Alox15b arachidonate 15-lipoxygenase type B ENCODES a protein that exhibits arachidonate 15-lipoxygenase activity (ortholog); arachidonate 8(S)-lipoxygenase activity (ortholog); calcium ion binding (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); cannabinoid biosynthetic process (ortholog); endocannabinoid signaling pathway (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); COVID-19 (ortholog); FOUND IN adherens junction (ortholog); cytoskeleton (ortholog); cytosol (ortholog) 9 48783817 48792778 - 22301074;30032202 116910211 MODEL JAAIVD010000002;XM_032914089;XM_032914090;XM_032914092 XP_032769980;XP_032769981;XP_032769983 arachidonate 15-lipoxygenase B protein-coding 625855342 LOC116912645 alpha-enolase-like 11 4272707 4282553 - 116912645 MODEL JAAIVD010000006 pseudo 625855343 Arnt2 aryl hydrocarbon receptor nuclear translocator 2 ENCODES a protein that exhibits aryl hydrocarbon receptor binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN brain development (ortholog); central nervous system development (ortholog); in utero embryonic development (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH atrial fibrillation (ortholog); chronic obstructive pulmonary disease (ortholog); Webb-Dattani Syndrome (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) 2 115945070 116098782 + 22301074;30032202 116891877 MODEL JAAIVD010000001;XM_032893284;XM_032893285;XM_032893286;XM_032893287 XP_032749175;XP_032749176;XP_032749177;XP_032749178 protein-coding 625855377 LOC116900375 olfactory receptor 5I1-like 5 69496702 69497655 - 22301074;30032202 116900375 MODEL JAAIVD010000023;XM_032902123 XP_032758014 protein-coding 625855381 Gpatch11 G-patch domain containing 11 FOUND IN kinetochore (ortholog); nucleoplasm (ortholog) 7 14390511 14401596 - 22301074;30032202 116905902 MODEL JAAIVD010000026;XM_032908891;XM_032908892 XP_032764782;XP_032764783 G patch domain-containing protein 11 protein-coding 625855397 LOC116896367 cytochrome b561 domain-containing protein 1 3 50056207 50059740 + 30032202 116896367 MODEL JAAIVD010000012;XM_032897483;XM_032897484 XP_032753374;XP_032753375 protein-coding 625855406 Fbxo17 F-box protein 17 FOUND IN SCF ubiquitin ligase complex (ortholog) 2 167270073 167285191 - 22301074;30032202 116894467 MODEL JAAIVD010000001;XM_032896178;XM_032896179 XP_032752069;XP_032752070 F-box only protein 17 protein-coding 625855420 C1qtnf1 C1q and TNF related 1 ENCODES a protein that exhibits collagen binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of platelet activation (ortholog); negative regulation of platelet aggregation (ortholog); positive regulation of aldosterone secretion (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) 9 65612174 65634256 - 22301074;30032202 116910021 MODEL JAAIVD010000002;XM_032913803;XR_004389122 XP_032769694 complement C1q tumor necrosis factor-related protein 1 protein-coding 625855431 LOC116900741 zinc finger protein 120-like 5 142459684 142462540 + 22301074 116900741 MODEL JAAIVD010000023;XM_032902446 XP_032758337 protein-coding 625855437 Tbc1d12 TBC1 domain family member 12 2 34868814 34946858 - 116891116 MODEL JAAIVD010000001;XM_032891831;XM_032891832 XP_032747722;XP_032747723 protein-coding 625855457 LOC116902538 small nucleolar RNA SNORA21 5 66376368 66376500 - 116902538 MODEL JAAIVD010000023;XR_004388141 snorna 625855460 Taf9 TATA-box binding protein associated factor 9 ENCODES a protein that exhibits ATPase binding (ortholog); C2H2 zinc finger domain binding (ortholog); DNA binding (ortholog); INVOLVED IN box C/D snoRNP assembly (ortholog); mRNA transcription by RNA polymerase II (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN de novo purine biosynthetic pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); FOUND IN MLL1 complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 3 158034972 158038824 + 22301074;30032202 116897094 MODEL JAAIVD010000012;XM_032898733;XM_032898734 XP_032754624;XP_032754625 transcription initiation factor TFIID subunit 9 protein-coding 625855470 Trnaq-uug transfer RNA glutamine (anticodon UUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889732 MODEL JAAIVD010000065 trna 625855471 LOC116900687 galactokinase-like 5 129701940 129703108 + 116900687 MODEL JAAIVD010000023 pseudo 625855472 Plin2 perilipin 2 INVOLVED IN cellular response to glucose starvation (ortholog); lipid droplet disassembly (ortholog); lipid storage (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Hypertriglyceridemia (ortholog); Insulin Resistance (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lipid droplet (ortholog) 1 67346065 67371139 + 30032202 116900493 MODEL JAAIVD010000025;XM_032902231;XM_032902239;XM_032902241 XP_032758122;XP_032758130;XP_032758132 perilipin-2 protein-coding 625855491 LOC116914194 U6 spliceosomal RNA 12 63073152 63073253 + 116914194 MODEL JAAIVD010000007;XR_004389730 snrna 625855494 Cela1 chymotrypsin like elastase 1 ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); INVOLVED IN digestive system development (ortholog); elastin catabolic process (ortholog); exocrine pancreas development (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Experimental Liver Cirrhosis (ortholog) 1 262423025 262436240 + 22301074;30032202 116883927 MODEL JAAIVD010000025;XM_032885182 XP_032741073 chymotrypsin-like elastase family member 1 protein-coding 625855506 Dus4l dihydrouridine synthase 4 like INVOLVED IN tRNA dihydrouridine synthesis (ortholog); ASSOCIATED WITH congenital disorder of glycosylation type IIi (ortholog) 7 45013075 45027997 - 22301074;30032202 116904956 MODEL JAAIVD010000026;XM_032907614;XM_032907615;XM_032907616 XP_032763505;XP_032763506;XP_032763507 tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like protein-coding 625855523 LOC116904725 small nucleolar RNA SNORA17 6 149443845 149443974 - 116904725 MODEL JAAIVD010000024;XR_004388417 snorna 625855526 Far2 fatty acyl-CoA reductase 2 ENCODES a protein that exhibits alcohol-forming very long-chain fatty acyl-CoA reductase activity (ortholog); INVOLVED IN long-chain fatty-acyl-CoA metabolic process (ortholog); ASSOCIATED WITH alopecia (ortholog); dry eye syndrome (ortholog); FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog) 6 5704576 5811723 + 30032202 116903103 MODEL JAAIVD010000024;XM_032905427 XP_032761318 protein-coding 625855542 LOC116889438 U6 spliceosomal RNA X 45803682 45803791 - 116889438 MODEL JAAIVD010000014;XR_004386400 snrna 625855545 LOC116909492 olfactory receptor 2T29-like 9 39556204 39557166 + 22301074 116909492 MODEL JAAIVD010000002;XM_032913090 XP_032768981 protein-coding 625855549 LOC116888882 vitamin K epoxide reductase complex subunit 1-like protein 1 X 86805026 86805460 - 22301074;30032202 116888882 MODEL JAAIVD010000014;XM_032890145 XP_032746036 protein-coding 625855554 LOC116885943 eukaryotic translation initiation factor 1-like 16 29183582 29183924 + 116885943 MODEL JAAIVD010000004 pseudo 625855555 C8H3orf18 chromosome 8 C3orf18 homolog 8 98655834 98663524 + 116907515 MODEL JAAIVD010000027;XM_032910517 XP_032766408 uncharacterized protein C3orf18 homolog protein-coding 625855564 Ptbp1 polypyrimidine tract binding protein 1 ENCODES a protein that exhibits mRNA binding (ortholog); pre-mRNA binding (ortholog); regulatory region RNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); cardiac ventricle development (ortholog); IRES-dependent viral translational initiation (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN neuron projection terminus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 155009877 155019662 - 22301074;30032202 116905578 MODEL JAAIVD010000025;XM_032908592;XM_032908594 XP_032764483;XP_032764485 polypyrimidine tract-binding protein 1 protein-coding 625855585 LOC116898370 60S ribosomal protein L9-like 4 63375016 63375632 + 116898370 MODEL JAAIVD010000003 pseudo 625855586 LOC116883182 60S ribosomal protein L27a-like 14 30607640 30609543 + 116883182 MODEL JAAIVD010000009 pseudo 625855587 Fam50a family with sequence similarity 50 member A INVOLVED IN regulation of RNA splicing (ortholog); ASSOCIATED WITH Armfield syndrome (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) X 128315005 128321823 + 30032202 116888978 MODEL JAAIVD010000014;XM_032890200 XP_032746091 protein FAM50A protein-coding 625855604 Ubap1l ubiquitin associated protein 1 like ASSOCIATED WITH fundus dystrophy (ortholog) 8 59674556 59686806 + 30032202 116907557 MODEL JAAIVD010000027;XM_032910580 XP_032766471 ubiquitin-associated protein 1-like protein-coding 625855613 LOC116889580 U6 spliceosomal RNA X 86178697 86178800 + 116889580 MODEL JAAIVD010000014;XR_004386496 snrna 625855616 Glb1 galactosidase beta 1 ENCODES a protein that exhibits beta-galactosidase activity (ortholog); galactoside binding (ortholog); hydrolase activity (ortholog); INVOLVED IN carbohydrate metabolic process (ortholog); galactose catabolic process (ortholog); ganglioside catabolic process (ortholog); PARTICIPATES IN Fabry disease pathway; galactose metabolic pathway; galactosemia pathway; ASSOCIATED WITH atopic dermatitis (ortholog); bone development disease (ortholog); contact dermatitis (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); lysosome (ortholog) 8 105006464 105078319 + 22301074;30032202 116907815 MODEL JAAIVD010000027;XM_032910991 XP_032766882 beta-galactosidase protein-coding 625855636 LOC116901092 zinc finger protein 844-like 5 155084638 155085919 + 116901092 MODEL JAAIVD010000023 pseudo 625855637 LOC116906191 mitogen-activated protein kinase 3-like 7 117331213 117332567 + 116906191 MODEL JAAIVD010000026 pseudo 625855638 LOC116910687 small nucleolar RNA SNORA43 9 90279055 90279201 - 116910687 MODEL JAAIVD010000002;XR_004389216 snorna 625855641 Tax1bp1 Tax1 binding protein 1 ENCODES a protein that exhibits kinase binding (ortholog); protein-macromolecule adaptor activity (ortholog); signaling adaptor activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of cytoplasmic pattern recognition receptor signaling pathway (ortholog); PARTICIPATES IN tumor necrosis factor mediated signaling pathway; FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) 6 88299917 88355394 - 30032202 116903785 MODEL JAAIVD010000024;XM_032906475;XM_032906476;XM_032906477;XM_032906478;XM_032906479 XP_032762366;XP_032762367;XP_032762368;XP_032762369;XP_032762370 tax1-binding protein 1 protein-coding 625855670 Tmem71 transmembrane protein 71 ASSOCIATED WITH congestive heart failure (ortholog); FOUND IN mitochondrion (ortholog) 1 240644520 240677971 - 116912205 MODEL JAAIVD010000025;XM_032916155 XP_032772046 protein-coding 625855684 Socs1 suppressor of cytokine signaling 1 ENCODES a protein that exhibits insulin-like growth factor receptor binding (ortholog); kinase inhibitor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN insulin signaling pathway; interleukin-12 signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcoholic hepatitis (ortholog); allergic contact dermatitis (ortholog); FOUND IN nucleoplasm (ortholog) 9 11569765 11571469 + 22301074;30032202 116910160 MODEL JAAIVD010000002;XM_032914018 XP_032769909 protein-coding 625855690 LOC116911715 olfactory receptor 6Y1 10 53030875 53031852 + 22301074 116911715 MODEL JAAIVD010000005;XM_032915686 XP_032771577 protein-coding 625855693 C1H1orf141 chromosome 1 C1orf141 homolog 1 51286799 51339573 + 116887651 MODEL JAAIVD010000025;XM_032889253 XP_032745144 uncharacterized protein C1orf141 homolog protein-coding 625855703 Celf2 CUGBP Elav-like family member 2 ENCODES a protein that exhibits lncRNA binding (ortholog); mRNA 3'-UTR binding (ortholog); pre-mRNA binding (ortholog); INVOLVED IN mRNA splice site recognition (ortholog); post-transcriptional gene silencing (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 14 (ortholog); developmental and epileptic encephalopathy 97 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 14 12877149 13699054 - 22301074;30032202 116883365 MODEL JAAIVD010000009;XM_032884454;XM_032884455;XM_032884456;XM_032884457;XM_032884458;XM_032884459;XM_032884460;XM_032884461;XM_032884462;XM_032884463;XM_032884465;XM_032884466;XM_032884467;XM_032884468;XM_032884469;XM_032884470;XM_032884471;XM_032884472;XM_032884473;XM_032884474;XM_032884476;XM_032884477;XM_032884478 XP_032740345;XP_032740346;XP_032740347;XP_032740348;XP_032740349;XP_032740350;XP_032740351;XP_032740352;XP_032740353;XP_032740354;XP_032740356;XP_032740357;XP_032740358;XP_032740359;XP_032740360;XP_032740361;XP_032740362;XP_032740363;XP_032740364;XP_032740365;XP_032740367;XP_032740368;XP_032740369 protein-coding 625855779 Prkar2b protein kinase cAMP-dependent type II regulatory subunit beta ENCODES a protein that exhibits cAMP binding (ortholog); cAMP-dependent protein kinase inhibitor activity (ortholog); cAMP-dependent protein kinase regulator activity (ortholog); INVOLVED IN fatty acid metabolic process (ortholog); learning (ortholog); modulation of chemical synaptic transmission (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH congestive heart failure (ortholog); granulosa cell tumor (ortholog); obesity (ortholog); FOUND IN cAMP-dependent protein kinase complex (ortholog); centrosome (ortholog); ciliary base (ortholog) 7 45351669 45441765 - 22301074 116904960 MODEL JAAIVD010000026;XM_032907621 XP_032763512 cAMP-dependent protein kinase type II-beta regulatory subunit protein-coding 625855794 Cnbp CCHC-type zinc finger nucleic acid binding protein ENCODES a protein that exhibits G-quadruplex DNA binding (ortholog); single-stranded DNA binding (ortholog); single-stranded RNA binding (ortholog); INVOLVED IN G-quadruplex DNA formation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH genetic disease (ortholog); myotonic disease (ortholog); myotonic dystrophy type 1 (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); nucleus (ortholog) 6 58464494 58473202 + 22301074;30032202 116903533 MODEL JAAIVD010000024;XM_032906144;XM_032906145;XM_032906146;XM_032906147 XP_032762035;XP_032762036;XP_032762037;XP_032762038 cellular nucleic acid-binding protein protein-coding 625855812 LOC116897521 small nucleolar RNA SNORA48 3 48692115 48692257 - 116897521 MODEL JAAIVD010000012;XR_004387537 snorna 625855815 LOC116912883 SMR1 protein-like 11 869778 874593 - 30032202 116912883 MODEL JAAIVD010000006;XM_032917121 XP_032773012 protein-coding 625855819 Mastl microtubule associated serine/threonine kinase like ENCODES a protein that exhibits kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN female meiosis II (ortholog); G2/M transition of mitotic cell cycle (ortholog); meiotic chromosome condensation (ortholog); ASSOCIATED WITH thrombocytopenia (ortholog); Thrombocytopenia 2 (ortholog); FOUND IN centrosome (ortholog); cleavage furrow (ortholog); meiotic spindle (ortholog) 14 1438987 1473930 + 22301074;30032202 116883744 MODEL JAAIVD010000009;XM_032884978;XM_032884979;XM_032884980 XP_032740869;XP_032740870;XP_032740871 serine/threonine-protein kinase greatwall protein-coding 625855838 Mtch1 mitochondrial carrier 1 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); protein insertion into mitochondrial outer membrane (ortholog); FOUND IN mitochondrion (ortholog) 18 4521574 4537568 + 30032202 116887004 MODEL JAAIVD010000013;XM_032888487;XM_032888488 XP_032744378;XP_032744379 mitochondrial carrier homolog 1 protein-coding 625855859 Rpia ribose 5-phosphate isomerase A ENCODES a protein that exhibits carbohydrate binding (ortholog); identical protein binding (ortholog); monosaccharide binding (ortholog); INVOLVED IN pentose-phosphate shunt (ortholog); pentose-phosphate shunt, non-oxidative branch (ortholog); PARTICIPATES IN pentose phosphate pathway; pentose phosphate pathway - non-oxidative phase; ribose 5-phosphate isomerase deficiency pathway; ASSOCIATED WITH genetic disease (ortholog); Ribose 5-Phosphate Isomerase Deficiency (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) 6 73723810 73749557 - 22301074;30032202 116903675 MODEL JAAIVD010000024;XM_032906334 XP_032762225 ribose-5-phosphate isomerase protein-coding 625855872 Rtl3 retrotransposon Gag like 3 X 63759080 63760956 - 22301074 116888339 MODEL JAAIVD010000014;XM_032889610 XP_032745501 retrotransposon Gag-like protein 3 protein-coding 625855877 LOC116898333 NACHT, LRR and PYD domains-containing protein 4A-like 4 43285386 43287186 - 116898333 MODEL JAAIVD010000003 pseudo 625855878 Plpp3 phospholipid phosphatase 3 ENCODES a protein that exhibits ceramide-1-phosphate phosphatase activity (ortholog); delta-catenin binding (ortholog); integrin binding (ortholog); INVOLVED IN Bergmann glial cell differentiation (ortholog); blood vessel development (ortholog); cell adhesion (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); coronary artery disease (ortholog); left ventricular failure (ortholog); FOUND IN adherens junction (ortholog); basolateral plasma membrane (ortholog); endoplasmic reticulum exit site (ortholog) 1 49380740 49455873 - 30032202 116899432 MODEL JAAIVD010000025;XM_032901190 XP_032757081 protein-coding 625855888 LOC116895742 heat shock cognate 71 kDa protein-like 3 34349151 34350665 + 116895742 MODEL JAAIVD010000012 pseudo 625855889 Cirop ciliated left-right organizer metallopeptidase ASSOCIATED WITH photosensitive trichothiodystrophy 1 (ortholog); visceral heterotaxy 12 (ortholog) 12 70302523 70308594 + 22301074;30032202 116913935 MODEL JAAIVD010000007;XM_032918198 XP_032774089 Lmln2 leishmanolysin like peptidase 2;leishmanolysin-like peptidase 2 protein-coding 625855906 LOC116913911 ski oncogene-like 12 27012995 27015118 - 116913911 MODEL JAAIVD010000007 pseudo 625855907 LOC116905572 60S ribosomal protein L39-like 7 96903478 96904190 + 22301074;30032202 116905572 MODEL JAAIVD010000026;XM_032908590 XP_032764481 protein-coding 625855911 LOC116885997 small nucleolar RNA SNORA67 16 4175589 4175731 - 116885997 MODEL JAAIVD010000004;XR_004386069 snorna 625855914 LOC116894697 activated RNA polymerase II transcriptional coactivator p15-like 2 217049369 217049753 - 116894697 MODEL JAAIVD010000001 pseudo 625855915 LOC116893826 acylcarnitine hydrolase-like 2 54890848 54917369 - 30032202 116893826 MODEL JAAIVD010000001;XM_032895540;XM_032895541;XM_032895542 XP_032751431;XP_032751432;XP_032751433 protein-coding 625855932 LOC116899838 small nucleolar RNA SNORA48 4 11503684 11503826 - 116899838 MODEL JAAIVD010000003;XR_004387835 snorna 625855935 Ccn4 cellular communication network factor 4 INVOLVED IN bone development (ortholog); glucose homeostasis (ortholog); negative regulation of chondrocyte differentiation (ortholog); ASSOCIATED WITH Airway Remodeling (ortholog); Experimental Liver Cirrhosis (ortholog); Hyperoxia (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog) 1 241006003 241034648 + 22301074;30032202 116890121 MODEL JAAIVD010000025;XM_032890859 XP_032746750 WNT1-inducible-signaling pathway protein 1 protein-coding 625855944 LOC116902849 uncharacterized LOC116902849 6 97378537 97381349 + 116902849 MODEL JAAIVD010000024;XR_004388243 ncrna 625855948 LOC116905843 ATP synthase subunit g, mitochondrial-like 7 109700175 109700646 - 22301074;30032202 116905843 MODEL JAAIVD010000026;XM_032908815 XP_032764706 protein-coding 625855953 Cfap107 cilia and flagella associated protein 107 INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); sperm flagellum (ortholog) 1 14383245 14402777 + 116886266 MODEL JAAIVD010000025;XM_032887692 XP_032743583 C1H1orf158 chromosome 1 C1orf158 homolog;uncharacterized protein C1orf158 homolog protein-coding 625855961 LOC116893137 60S ribosomal protein L27a-like 2 87366075 87366502 + 116893137 MODEL JAAIVD010000001 pseudo 625855962 Wipf2 WAS/WASL interacting protein family member 2 9 55538975 55575442 - 22301074 116909209 MODEL JAAIVD010000002;XM_032912708;XM_032912709;XM_032912710 XP_032768599;XP_032768600;XP_032768601 WAS/WASL-interacting protein family member 2 protein-coding 625855978 LOC116885151 39S ribosomal protein L17, mitochondrial-like 16 3743716 3744210 + 116885151 MODEL JAAIVD010000004 pseudo 625855979 LOC116902214 uncharacterized LOC116902214 5 136224852 136225455 - 116902214 MODEL JAAIVD010000023;XR_004388050 ncrna 625855983 LOC116895835 60S ribosomal protein L7-like 3 80763494 80769573 - 116895835 MODEL JAAIVD010000012 pseudo 625855984 Gdap1l1 ganglioside induced differentiation associated protein 1 like 1 FOUND IN mitochondrion (ortholog) 5 154513233 154531426 - 116902382 MODEL JAAIVD010000023;XM_032904893;XM_032904894;XM_032904896 XP_032760784;XP_032760785;XP_032760787 ganglioside-induced differentiation-associated protein 1-like 1 protein-coding 625856002 LOC116914977 golgin subfamily A member 4-like 13 21933068 21938083 - 116914977 MODEL JAAIVD010000008 pseudo 625856003 LOC116895917 TD and POZ domain-containing protein 2-like 3 120866529 120867629 + 30032202 116895917 MODEL JAAIVD010000012;XM_032896992 XP_032752883 protein-coding 625856007 LOC116907712 40S ribosomal protein S25-like 8 91351115 91351547 - 30032202 116907712 MODEL JAAIVD010000027;XM_032910838 XP_032766729 protein-coding 625856011 Ly6k lymphocyte antigen 6 family member K INVOLVED IN binding of sperm to zona pellucida (ortholog); flagellated sperm motility (ortholog); FOUND IN acrosomal vesicle (ortholog); cell surface (ortholog); cytoplasm (ortholog) 1 247536412 247539905 - 30032202 116890134 MODEL JAAIVD010000025;XM_032890871 XP_032746762 lymphocyte antigen 6K protein-coding 625856019 Arhgap30 Rho GTPase activating protein 30 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN negative regulation of Rho protein signal transduction (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); polycystic ovary syndrome (ortholog) 10 50559842 50580108 + 30032202 116911604 MODEL JAAIVD010000005;XM_032915580 XP_032771471 rho GTPase-activating protein 30 protein-coding 625856035 LOC116899408 uncharacterized LOC116899408 4 132865066 132872015 - 116899408 MODEL JAAIVD010000003 pseudo 625856036 Uso1 USO1 vesicle transport factor INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); Golgi organization (ortholog); membrane fusion (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; ASSOCIATED WITH Arsenic Poisoning (ortholog); Prostatic Neoplasms (ortholog); skin disease (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); perinuclear region of cytoplasm (ortholog) 11 4969986 5034952 + 22301074;30032202 116912424 MODEL JAAIVD010000006;XM_032916492 XP_032772383 general vesicular transport factor p115 protein-coding 625856064 Rap1gap2 RAP1 GTPase activating protein 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN negative regulation of neuron projection development (ortholog); regulation of cell size (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 93125011 93345115 - 22301074;30032202 116909891 MODEL JAAIVD010000002;XM_032913630;XM_032913631;XM_032913632;XM_032913633;XM_032913634;XM_032913636;XM_032913637 XP_032769521;XP_032769522;XP_032769523;XP_032769524;XP_032769525;XP_032769527;XP_032769528 rap1 GTPase-activating protein 2 protein-coding 625856110 LOC116887068 60S ribosomal protein L35a-like 1 36395207 36395543 + 22301074;30032202 116887068 MODEL JAAIVD010000025;XM_032888573 XP_032744464 protein-coding 625856114 LOC116891279 insulin-1 2 51693947 51694512 + 22301074;30032202 116891279 MODEL JAAIVD010000001;XM_032892182 XP_032748073 protein-coding 625856120 Tigit T cell immunoreceptor with Ig and ITIM domains ENCODES a protein that exhibits identical protein binding (ortholog); signaling receptor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN negative regulation of interleukin-12 production (ortholog); negative regulation of natural killer cell mediated cytotoxicity (ortholog); negative regulation of T cell activation (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) 4 28553928 28570148 - 30032202 116897881 MODEL JAAIVD010000003;XM_032899285 XP_032755176 T-cell immunoreceptor with Ig and ITIM domains protein-coding 625856128 LOC116901070 ribosome biogenesis protein NSA2 homolog 1 119271442 119275659 - 116901070 MODEL JAAIVD010000025 pseudo 625856129 Mapk8ip1 mitogen-activated protein kinase 8 interacting protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); JUN kinase binding (ortholog); kinesin binding (ortholog); INVOLVED IN JUN phosphorylation (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of intrinsic apoptotic signaling pathway (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; ASSOCIATED WITH maturity-onset diabetes of the young type 1 (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN axon (ortholog); axonal growth cone (ortholog); cell body (ortholog) 5 66521880 66531447 - 22301074;30032202 116901643 MODEL JAAIVD010000023;XM_032903743;XM_032903744 XP_032759634;XP_032759635 C-Jun-amino-terminal kinase-interacting protein 1 protein-coding 625856147 Rad51ap2 RAD51 associated protein 2 FOUND IN protein-containing complex (ortholog) 7 31451394 31458155 + 116905722 MODEL JAAIVD010000026;XM_032908690 XP_032764581 RAD51-associated protein 2 protein-coding 625856153 Ctla4 cytotoxic T-lymphocyte associated protein 4 ENCODES a protein that exhibits receptor decoy activity (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); DNA damage response (ortholog); negative regulation of B cell proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adult T-cell leukemia/lymphoma (ortholog); alcohol-associated liver disease (ortholog); FOUND IN clathrin-coated endocytic vesicle (ortholog); external side of plasma membrane (ortholog); Golgi apparatus (ortholog) 4 134979731 134985687 + 22301074;30032202 116898192 MODEL JAAIVD010000003;XM_032899555;XM_032899556 XP_032755446;XP_032755447 cytotoxic T-lymphocyte protein 4 protein-coding 625856162 LOC116905602 uncharacterized LOC116905602 7 28819677 28822468 - 116905602 MODEL JAAIVD010000026;XR_004388554 ncrna 625856167 Dhrs13 dehydrogenase/reductase 13 9 92407787 92412948 - 116908798 MODEL JAAIVD010000002;XM_032912200 XP_032768091 dehydrogenase/reductase SDR family member 13 protein-coding 625856176 Znf445 zinc finger protein 445 ENCODES a protein that exhibits chromatin binding (ortholog); double-stranded methylated DNA binding (ortholog); INVOLVED IN epigenetic programing of female pronucleus (ortholog); negative regulation of gene expression via chromosomal CpG island methylation (ortholog); FOUND IN nucleus (ortholog) 8 113951066 113970468 - 22301074 116908007 MODEL JAAIVD010000027;XM_032911264 XP_032767155 protein-coding 625856187 LOC116887683 fatty acid-binding protein 5-like 18 25545277 25545671 - 116887683 MODEL JAAIVD010000013 pseudo 625856188 Atg2b autophagy related 2B ENCODES a protein that exhibits lipid transfer activity (ortholog); ASSOCIATED WITH myeloid leukemia (ortholog); myeloid neoplasm (ortholog); FOUND IN endoplasmic reticulum (ortholog) 7 123274840 123344936 - 30032202 116905440 MODEL JAAIVD010000026;XM_032908381 XP_032764272 autophagy-related protein 2 homolog B protein-coding 625856234 LOC116887930 small nuclear ribonucleoprotein Sm D2-like X 59960495 59964777 - 116887930 MODEL JAAIVD010000014 pseudo 625856235 LOC116889614 elongin-B-like Y 2072280 2072783 - 116889614 MODEL JAAIVD010000015 pseudo 625856236 LOC116888879 40S ribosomal protein SA-like X 35610039 35610902 + 116888879 MODEL JAAIVD010000014 pseudo 625856237 Tmem114 transmembrane protein 114 FOUND IN apical plasma membrane (ortholog); apicolateral plasma membrane (ortholog) 9 13581408 13597667 + 30032202 116909530 MODEL JAAIVD010000002;XM_032913136 XP_032769027 protein-coding 625856245 LOC116909351 uncharacterized LOC116909351 9 54342866 54347074 + 116909351 MODEL JAAIVD010000002;XR_004389068 ncrna 625856249 Taf1d TATA-box binding protein associated factor, RNA polymerase I subunit D ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH Arsenic Poisoning (ortholog); skin disease (ortholog); FOUND IN nucleoplasm (ortholog) 8 11101316 11106899 + 22301074;30032202 116907237 MODEL JAAIVD010000027;XM_032910199 XP_032766090 TATA box-binding protein-associated factor RNA polymerase I subunit D protein-coding 625856258 LOC116915002 transcription factor Sp2-like 13 31659875 31662473 - 116915002 MODEL JAAIVD010000008 pseudo 625856259 LOC116889282 dnaJ homolog subfamily A member 1-like 1 129325849 129326616 + 116889282 MODEL JAAIVD010000025 pseudo 625856260 Tlr3 toll like receptor 3 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); identical protein binding (ortholog); pattern recognition receptor activity (ortholog); INVOLVED IN cellular response to exogenous dsRNA (ortholog); cellular response to interferon-beta (ortholog); cellular response to mechanical stimulus (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH Acute-On-Chronic Liver Failure (ortholog); adult respiratory distress syndrome (ortholog); alcohol dependence (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); early endosome (ortholog) 13 42428925 42441404 + 22301074;30032202 116914649 MODEL JAAIVD010000008;XM_032919046;XR_004389758 XP_032774937 toll-like receptor 3 protein-coding 625856272 Ftl ferritin light chain ENCODES a protein that exhibits identical protein binding (ortholog); iron ion binding (ortholog); INVOLVED IN response to lead ion (ortholog); PARTICIPATES IN iron storage pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); basal ganglia disease (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN autolysosome (ortholog); ferritin complex (ortholog) 2 154051659 154053516 + 22301074;30032202 116892150 MODEL JAAIVD010000001;XM_032893645 XP_032749536 protein-coding 625856280 Trnaa-ugc transfer RNA alanine (anticodon UGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 16 28508270 28508341 + 116886019 MODEL JAAIVD010000004 trna 625856281 LOC116911670 60S ribosomal protein L37-like 1 232229354 232240987 - 116911670 MODEL JAAIVD010000025 pseudo 625856282 LOC116887510 acyl-protein thioesterase 1-like 18 49691053 49691738 - 116887510 MODEL JAAIVD010000013 pseudo 625856283 Pak3 p21 (RAC1) activated kinase 3 ENCODES a protein that exhibits GTPase binding (ortholog); MAP kinase kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN axonogenesis (ortholog); dendrite development (ortholog); dendritic spine development (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); microcephaly (ortholog); FOUND IN endosome (ortholog); glutamatergic synapse (ortholog); postsynaptic density (ortholog) X 95703579 95815497 + 22301074;30032202 116888567 MODEL JAAIVD010000014;XM_032889871 XP_032745762 serine/threonine-protein kinase PAK 3 protein-coding 625856304 Orai2 ORAI calcium release-activated calcium modulator 2 ENCODES a protein that exhibits store-operated calcium channel activity (ortholog); INVOLVED IN store-operated calcium entry (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; FOUND IN cytosol (ortholog); growth cone (ortholog); membrane (ortholog) 16 17843125 17861139 + 30032202 116885683 MODEL JAAIVD010000004;XM_032886991 XP_032742882 protein orai-2 protein-coding 625856311 LOC116911797 olfactory receptor 10X1-like 10 52966235 52967197 + 22301074 116911797 MODEL JAAIVD010000005;XM_032915799 XP_032771690 protein-coding 625856315 LOC116894210 olfactory receptor 494 2 106498020 106498964 + 22301074;30032202 116894210 MODEL JAAIVD010000001;XM_032895923 XP_032751814 protein-coding 625856318 LOC116884654 poly(A) polymerase alpha-like 1 211570820 211579836 - 116884654 MODEL JAAIVD010000025 pseudo 625856319 Suclg2 succinate-CoA ligase GDP-forming subunit beta ENCODES a protein that exhibits GDP binding (ortholog); protein-containing complex binding (ortholog); succinate-CoA ligase (GDP-forming) activity (ortholog); INVOLVED IN succinate metabolic process (ortholog); succinyl-CoA metabolic process (ortholog); tricarboxylic acid cycle (ortholog); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; mitochondrial complex II deficiency pathway; ASSOCIATED WITH Animal Disease Models (ortholog); endometriosis (ortholog); lung adenocarcinoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) 6 51233582 51380915 + 22301074;30032202 116903479 MODEL JAAIVD010000024;XM_032906046 XP_032761937 succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial protein-coding 625856331 LOC116904627 olfactory receptor 6C74-like 6 30179926 30180909 - 22301074;30032202 116904627 MODEL JAAIVD010000024;XM_032907418 XP_032763309 protein-coding 625856334 LOC116886755 5S ribosomal RNA 17 43160616 43160734 - 116886755 MODEL JAAIVD010000011;XR_004386157 rrna 625856337 Mterf4 mitochondrial transcription termination factor 4 ENCODES a protein that exhibits protein-RNA adaptor activity (ortholog); RNA folding chaperone (ortholog); rRNA binding (ortholog); INVOLVED IN camera-type eye development (ortholog); heart development (ortholog); mitochondrial large ribosomal subunit assembly (ortholog); FOUND IN mitochondrion (ortholog) 4 165227614 165232347 - 22301074;30032202 116899658 MODEL JAAIVD010000003;XM_032901669 XP_032757560 transcription termination factor 4, mitochondrial protein-coding 625856345 Plpp5 phospholipid phosphatase 5 ENCODES a protein that exhibits diacylglycerol diphosphate phosphatase activity (ortholog); phosphatidate phosphatase activity (ortholog); INVOLVED IN phospholipid dephosphorylation (ortholog) 13 60773903 60778029 - 30032202 116915116 MODEL JAAIVD010000008;XM_032919562 XP_032775453 protein-coding 625856356 Tenm1 teneurin transmembrane protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); ASSOCIATED WITH sensorineural hearing loss (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); plasma membrane (ortholog) X 109386643 109561648 - 30032202 116888146 MODEL JAAIVD010000014;XM_032889476 XP_032745367 teneurin-1 protein-coding 625856379 LOC116904615 uncharacterized LOC116904615 6 29113248 29120009 - 116904615 MODEL JAAIVD010000024;XR_004388344 ncrna 625856383 LOC116896053 peroxiredoxin-1-like 3 200988719 200989469 - 116896053 MODEL JAAIVD010000012 pseudo 625856384 LOC116906182 polyglutamine-binding protein 1-like 7 110728660 110738053 + 116906182 MODEL JAAIVD010000026 pseudo 625856385 LOC116889077 thyroid hormone receptor-associated protein 3-like X 25342311 25345199 - 116889077 MODEL JAAIVD010000014 pseudo 625856386 Shtn1 shootin 1 ENCODES a protein that exhibits actin filament binding (ortholog); cell adhesion molecule binding (ortholog); identical protein binding (ortholog); INVOLVED IN actin filament bundle retrograde transport (ortholog); axonogenesis (ortholog); Cdc42 protein signal transduction (ortholog); FOUND IN axon (ortholog); axonal growth cone (ortholog); cell leading edge (ortholog) 2 57037958 57142287 + 116891316 MODEL JAAIVD010000001;XM_032892230;XM_032892233;XM_032892234 XP_032748121;XP_032748124;XP_032748125 shootin-1 protein-coding 625856416 LOC116890233 olfactory receptor 8S1-like 1 271139306 271140265 - 22301074 116890233 MODEL JAAIVD010000025;XM_032890963 XP_032746854 protein-coding 625856419 Mettl21c methyltransferase 21C, AARS1 lysine ENCODES a protein that exhibits heat shock protein binding (ortholog); protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); hormone-mediated apoptotic signaling pathway (ortholog); protein methylation (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) 4 120062609 120070393 - 30032202 116898483 MODEL JAAIVD010000003;XM_032899730 XP_032755621 methyltransferase like 21C;protein-lysine methyltransferase METTL21C protein-coding 625856425 LOC116912057 uncharacterized LOC116912057 11 95439187 95440645 - 116912057 MODEL JAAIVD010000006 pseudo 625856426 LOC116886230 arylacetamide deacetylase-like 4 1 14019492 14045793 + 22301074 116886230 MODEL JAAIVD010000025;XM_032887630 XP_032743521 protein-coding 625856432 LOC116890569 small nucleolar RNA SNORA17 1 175128488 175128618 + 116890569 MODEL JAAIVD010000025;XR_004386738 snorna 625856435 Mcf2 MCF.2 cell line derived transforming sequence ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); dendrite development (ortholog); ASSOCIATED WITH Failure to Thrive (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) X 119145614 119236534 - 22301074;30032202 116888182 MODEL JAAIVD010000014;XM_032889498 XP_032745389 proto-oncogene DBL protein-coding 625856466 LOC116905464 uncharacterized LOC116905464 7 127151556 127199164 + 116905464 MODEL JAAIVD010000026;XM_032908429;XM_032908430;XM_032908431;XM_032908432;XR_004388528;XR_004388529;XR_004388530;XR_004388531;XR_004388532;XR_004388533;XR_004388534;XR_004388535 XP_032764320;XP_032764321;XP_032764322;XP_032764323 uncharacterized protein LOC116905464 protein-coding 625856510 LOC116905806 zinc finger protein 431-like 1 155382183 155383277 - 30032202 116905806 MODEL JAAIVD010000025;XM_032908777 XP_032764668 protein-coding 625856515 Necab2 N-terminal EF-hand calcium binding protein 2 ENCODES a protein that exhibits A2A adenosine receptor binding (ortholog); identical protein binding (ortholog); type 5 metabotropic glutamate receptor binding (ortholog); INVOLVED IN negative regulation of G protein-coupled receptor internalization (ortholog); positive regulation of adenosine receptor signaling pathway (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); FOUND IN plasma membrane (ortholog); postsynapse (ortholog); presynapse (ortholog) 17 39093781 39119653 + 22301074;30032202 116886314 MODEL JAAIVD010000011;XM_032887756 XP_032743647 N-terminal EF-hand calcium-binding protein 2 protein-coding 625856532 LOC116884931 39S ribosomal protein L30, mitochondrial-like 15 15378253 15423477 + 116884931 MODEL JAAIVD010000010 pseudo 625856533 Rtp4 receptor transporter protein 4 INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); protein targeting to membrane (ortholog); ASSOCIATED WITH Human Influenza (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog) 4 8413643 8417475 + 30032202 116898728 MODEL JAAIVD010000003;XM_032900036 XP_032755927 receptor-transporting protein 4 protein-coding 625856539 LOC116913947 protein mago nashi homolog 12 71618202 71618763 - 116913947 MODEL JAAIVD010000007 pseudo 625856540 LOC116885863 olfactory receptor 13J1 1 2788929 2789867 + 22301074 116885863 MODEL JAAIVD010000025;XM_032887192 XP_032743083 protein-coding 625856543 LOC116898605 translation machinery-associated protein 16-like 4 1152727 1153458 - 116898605 MODEL JAAIVD010000003 pseudo 625856544 LOC116905647 uncharacterized LOC116905647 7 5447333 5461249 - 116905647 MODEL JAAIVD010000026;XR_004388556 ncrna 625856548 LOC116887357 olfactory receptor 14J1-like 18 10767360 10768331 + 22301074;30032202 116887357 MODEL JAAIVD010000013;XM_032888952 XP_032744843 protein-coding 625856551 Smn1 survival of motor neuron 1, telomeric ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN axonogenesis (ortholog); chemical synaptic transmission (ortholog); DNA-templated transcription termination (ortholog); PARTICIPATES IN apoptotic cell death pathway; ASSOCIATED WITH adult spinal muscular atrophy (ortholog); childhood spinal muscular atrophy (ortholog); genetic disease (ortholog); FOUND IN Cajal body (ortholog); COPI-coated vesicle (ortholog); cytoplasm (ortholog) 3 196465716 196475682 - 22301074;30032202 116897243 MODEL JAAIVD010000012;XM_032898974 XP_032754865 survival motor neuron protein protein-coding 625856564 Ddx56 DEAD-box helicase 56 ENCODES a protein that exhibits protein sequestering activity (ortholog); RNA stem-loop binding (ortholog); INVOLVED IN defense response to virus (ortholog); host-mediated perturbation of viral RNA genome replication (ortholog); negative regulation of type I interferon production (ortholog); PARTICIPATES IN ribosome biogenesis pathway; FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleus (ortholog) 11 75182740 75191432 - 22301074;30032202 116912586 MODEL JAAIVD010000006;XM_032916702 XP_032772593 probable ATP-dependent RNA helicase DDX56 protein-coding 625856582 Dcun1d3 defective in cullin neddylation 1 domain containing 3 ENCODES a protein that exhibits cullin family protein binding (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of G1/S transition of mitotic cell cycle (ortholog); negative regulation of protein neddylation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 2 81782233 81825198 + 30032202 116891591 MODEL JAAIVD010000001;XM_032892773;XM_032892774;XM_032892775;XM_032892777 XP_032748664;XP_032748665;XP_032748666;XP_032748668 DCN1-like protein 3 protein-coding 625856597 Tmf1 TATA element modulatory factor 1 ENCODES a protein that exhibits nuclear androgen receptor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN acrosome assembly (ortholog); androgen receptor signaling pathway (ortholog); defense response to bacterium (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog); Prostatic Neoplasms (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) 6 49857317 49883134 + 30032202 116903474 MODEL JAAIVD010000024;XM_032906038 XP_032761929 TATA element modulatory factor protein-coding 625856618 LOC116903609 FAD-linked sulfhydryl oxidase ALR-like 6 106176195 106177231 + 116903609 MODEL JAAIVD010000024 pseudo 625856619 Tekt4 tektin 4 INVOLVED IN cilium movement involved in cell motility (ortholog); flagellated sperm motility (ortholog); regulation of brood size (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); sperm end piece (ortholog) 9 2735561 2740642 + 22301074;30032202 116909290 MODEL JAAIVD010000002;XM_032912829 XP_032768720 tektin-4 protein-coding 625856629 Cyth3 cytohesin 3 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); INVOLVED IN establishment of epithelial cell polarity (ortholog); Golgi vesicle transport (ortholog); positive regulation of cell adhesion (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; FOUND IN adherens junction (ortholog); bicellular tight junction (ortholog); cytoplasm (ortholog) 16 9410814 9502253 - 22301074 116885582 MODEL JAAIVD010000004;XM_032886878;XM_032886879;XM_032886880;XM_032886881 XP_032742769;XP_032742770;XP_032742771;XP_032742772 cytohesin-3 protein-coding 625856658 Slit1 slit guidance ligand 1 ENCODES a protein that exhibits heparan sulfate proteoglycan binding (ortholog); Roundabout binding (ortholog); INVOLVED IN axon extension involved in axon guidance (ortholog); axon guidance (ortholog); axonogenesis (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); Monomelic Amyotrophy (ortholog); Spinal Cord Injuries (ortholog); FOUND IN extracellular region (ortholog) 2 40708454 40852731 - 22301074;30032202 116891161 MODEL JAAIVD010000001;XM_032891963 XP_032747854 slit homolog 1 protein protein-coding 625856699 Luzp1 leucine zipper protein 1 ENCODES a protein that exhibits actin filament binding (ortholog); microtubule binding (ortholog); INVOLVED IN apical constriction (ortholog); artery development (ortholog); contractile ring contraction (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); centrosome (ortholog) 1 21688134 21763044 - 116894283 MODEL JAAIVD010000025;XM_032895994;XM_032895999 XP_032751885;XP_032751890 protein-coding 625856711 LOC116913734 60S ribosomal protein L31-like 12 53329614 53330009 + 116913734 MODEL JAAIVD010000007 pseudo 625856712 LOC116911277 uncharacterized LOC116911277 10 59096984 59098080 - 116911277 MODEL JAAIVD010000005;XR_004389320 ncrna 625856716 Pitpnb phosphatidylinositol transfer protein beta ENCODES a protein that exhibits phosphatidylcholine binding (ortholog); phosphatidylcholine intramembrane carrier activity (ortholog); phosphatidylcholine transfer activity (ortholog); INVOLVED IN in utero embryonic development (ortholog); phospholipid transport (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) 16 42588705 42640632 - 22301074;30032202 116885164 MODEL JAAIVD010000004;XM_032886378;XM_032886379;XM_032886380 XP_032742269;XP_032742270;XP_032742271 phosphatidylinositol transfer protein beta isoform protein-coding 625856738 Ldlr low density lipoprotein receptor ENCODES a protein that exhibits amyloid-beta binding (ortholog); identical protein binding (ortholog); low-density lipoprotein particle binding (ortholog); INVOLVED IN amyloid-beta clearance (ortholog); amyloid-beta clearance by cellular catabolic process (ortholog); artery development (ortholog); PARTICIPATES IN atherosclerosis pathway; ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); Animal Toxoplasmosis (ortholog); aortic atherosclerosis (ortholog); FOUND IN apical part of cell (ortholog); basolateral plasma membrane (ortholog); caveola (ortholog) 8 17993107 18017686 + 22301074 116906732 MODEL JAAIVD010000027;XM_032909545 XP_032765436 low-density lipoprotein receptor protein-coding 625856760 Fos Fos proto-oncogene, AP-1 transcription factor subunit ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); cellular response to epidermal growth factor stimulus (ortholog); cellular response to hormone stimulus (ortholog); PARTICIPATES IN endothelin signaling pathway; fibroblast growth factor signaling pathway; forkhead class A signaling pathway; ASSOCIATED WITH Aberrant Crypt Foci (ortholog); acute myocardial infarction (ortholog); alcohol dependence (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); nuclear matrix (ortholog) 7 99575709 99579136 + 22301074;30032202;3325886 116905298 MODEL JAAIVD010000026;X06769;XM_032908166 CAA29937;XP_032764057 proto-oncogene c-Fos protein-coding 625856768 Abca4 ATP binding cassette subfamily A member 4 ENCODES a protein that exhibits 11-cis retinal binding (ortholog); all-trans retinal binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN phospholipid transfer to membrane (ortholog); phospholipid translocation (ortholog); photoreceptor cell maintenance (ortholog); PARTICIPATES IN altered retinoid cycle metabolic pathway; retinitis pigmentosa pathway; retinoid cycle metabolic pathway; ASSOCIATED WITH age related macular degeneration (ortholog); age related macular degeneration 14 (ortholog); age related macular degeneration 2 (ortholog); FOUND IN cytoplasmic vesicle (ortholog); endoplasmic reticulum (ortholog); photoreceptor outer segment (ortholog) 3 37640360 37773718 - 22301074;30032202 116895336 MODEL JAAIVD010000012;XM_032896643 XP_032752534 retinal-specific phospholipid-transporting ATPase ABCA4 protein-coding 625856821 LOC116900535 olfactory receptor 4F15-like 5 89580687 89581625 + 22301074 116900535 MODEL JAAIVD010000023;XM_032902262 XP_032758153 protein-coding 625856824 LOC116910924 60S ribosomal protein L34-like 10 55795276 55804286 + 116910924 MODEL JAAIVD010000005 pseudo 625856825 LOC116892904 zinc finger protein 54-like 1 63943824 63952978 + 116892904 MODEL JAAIVD010000025 pseudo 625856826 LOC116914685 histone PARylation factor 1 ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); protein ADP-ribosyltransferase-substrate adaptor activity (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); DNA repair-dependent chromatin remodeling (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog); site of DNA damage (ortholog) 13 28103365 28119100 - 22301074;30032202 116914685 MODEL JAAIVD010000008;XM_032919102;XM_032919103 XP_032774993;XP_032774994 protein-coding 625856841 LOC116893982 prohibitin-like 1 70410802 70417276 + 116893982 MODEL JAAIVD010000025 pseudo 625856842 LOC116904757 small nucleolar RNA SNORA17 6 97660275 97660405 + 116904757 MODEL JAAIVD010000024;XR_004388433 snorna 625856845 Capn8 calpain 8 ENCODES a protein that exhibits calcium-dependent cysteine-type endopeptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN calcium-dependent self proteolysis (ortholog); ASSOCIATED WITH celiac disease (ortholog) 10 60861998 60927322 + 22301074;30032202 116911530 MODEL JAAIVD010000005;XM_032915520 XP_032771411 calpain-8 protein-coding 625856870 LOC116897429 U6 spliceosomal RNA 3 120294680 120294783 - 116897429 MODEL JAAIVD010000012;XR_004387470 snrna 625856873 Tspan1 tetraspanin 1 INVOLVED IN protein stabilization (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2O (ortholog); congenital muscular dystrophy-dystroglycanopathy type A3 (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); perinuclear region of cytoplasm (ortholog) 1 39846074 39850464 - 22301074;30032202 116898268 MODEL JAAIVD010000025;XM_032899624 XP_032755515 tetraspanin-1 protein-coding 625856884 Lrrc25 leucine rich repeat containing 25 INVOLVED IN canonical NF-kappaB signal transduction (ortholog); connective tissue replacement involved in inflammatory response wound healing (ortholog); gene expression (ortholog); FOUND IN cytosol (ortholog) 13 12870988 12873741 + 22301074 116914956 MODEL JAAIVD010000008;XM_032919373 XP_032775264 leucine-rich repeat-containing protein 25 protein-coding 625856889 LOC116890334 U6 spliceosomal RNA 1 13071237 13071343 - 116890334 MODEL JAAIVD010000025;XR_004386557 snrna 625856892 Picalm phosphatidylinositol binding clathrin assembly protein ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); clathrin binding (ortholog); clathrin heavy chain binding (ortholog); INVOLVED IN amyloid-beta clearance by transcytosis (ortholog); axonogenesis (ortholog); clathrin coat assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Cognitive Dysfunction (ortholog); FOUND IN cell surface (ortholog); clathrin coat of coated pit (ortholog); clathrin-coated pit (ortholog) 2 110968328 111050711 - 22301074;30032202 116891855 MODEL JAAIVD010000001;XM_032893230;XM_032893233;XM_032893234;XM_032893235;XM_032893236;XM_032893237;XM_032893238;XM_032893239;XM_032893240;XM_032893241;XM_032893242;XM_032893244;XM_032893245;XM_032893246;XM_032893247;XM_032893248;XM_032893249 XP_032749121;XP_032749124;XP_032749125;XP_032749126;XP_032749127;XP_032749128;XP_032749129;XP_032749130;XP_032749131;XP_032749132;XP_032749133;XP_032749135;XP_032749136;XP_032749137;XP_032749138;XP_032749139;XP_032749140 phosphatidylinositol-binding clathrin assembly protein protein-coding 625856939 Rab9a RAB9A, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN positive regulation of exocytosis (ortholog); receptor-mediated endocytosis (ortholog); regulation of protein localization (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); late endosome (ortholog); lysosome (ortholog) X 30571270 30592204 - 22301074;30032202 116889271 MODEL JAAIVD010000014;XM_032890414 XP_032746305 ras-related protein Rab-9A protein-coding 625856946 Anapc4 anaphase promoting complex subunit 4 ENCODES a protein that exhibits protein phosphatase binding (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); FOUND IN anaphase-promoting complex (ortholog); nucleus (ortholog) 11 53290089 53321620 - 22301074;30032202 116912157 MODEL JAAIVD010000006;XM_032916078 XP_032771969 anaphase-promoting complex subunit 4 protein-coding 625856978 Wif1 WNT inhibitory factor 1 INVOLVED IN positive regulation of fat cell differentiation (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH breast cancer (ortholog); Colorectal Neoplasms (ortholog); Endometrioid Carcinomas (ortholog) 1 199023685 199094277 + 30032202 116909470 MODEL JAAIVD010000025;XM_032913062 XP_032768953 protein-coding 625856992 Trmt11 tRNA methyltransferase 11 ENCODES a protein that exhibits tRNA (guanine(10)-N2)-methyltransferase activity (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Colonic Neoplasms (ortholog); Esophageal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); tRNA (m2G10) methyltransferase complex (ortholog) 2 204217901 204663316 - 22301074;30032202 116892924 MODEL JAAIVD010000001;XM_032894850;XM_032894852;XM_032894853 XP_032750741;XP_032750743;XP_032750744 tRNA (guanine(10)-N2)-methyltransferase homolog;tRNA methyltransferase 11 homolog protein-coding 625857014 LOC116885672 cytochrome c oxidase assembly factor 3 homolog, mitochondrial-like 16 8101952 8102871 + 116885672 MODEL JAAIVD010000004 pseudo 625857015 LOC116914494 defensin alpha-like protein 1 13 64745355 64775960 + 22301074;30032202 116914494 MODEL JAAIVD010000008;XM_032918807;XM_032918808;XM_032918809 XP_032774698;XP_032774699;XP_032774700 protein-coding 625857025 LOC116888680 eukaryotic peptide chain release factor subunit 1-like X 121565477 121566898 - 116888680 MODEL JAAIVD010000014 pseudo 625857026 Gbx1 gastrulation brain homeobox 1 INVOLVED IN adult walking behavior (ortholog); neuron fate commitment (ortholog); proprioception (ortholog); FOUND IN nucleus (ortholog) 6 153700487 153724998 - 22301074;30032202 116903012 MODEL JAAIVD010000024;XM_032905322 XP_032761213 homeobox protein GBX-1 protein-coding 625857032 LOC116913481 kelch repeat and BTB domain-containing protein 7-like 12 44922591 44927644 - 22301074 116913481 MODEL JAAIVD010000007;XM_032917683 XP_032773574 protein-coding 625857037 LOC116902647 U2 spliceosomal RNA 5 45878405 45878565 + 116902647 MODEL JAAIVD010000023 pseudo 625857038 Txk TXK tyrosine kinase INVOLVED IN adaptive immune response (ortholog); NK T cell differentiation (ortholog); positive regulation of cytokine production (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) 11 29503607 29549787 - 22301074;30032202 116912290 MODEL JAAIVD010000006;XM_032916289 XP_032772180 tyrosine-protein kinase TXK protein-coding 625857056 Dagla diacylglycerol lipase alpha ENCODES a protein that exhibits hydrolase activity (ortholog); monoacylglycerol lipase activity (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); cannabinoid biosynthetic process (ortholog); diacylglycerol catabolic process (ortholog); PARTICIPATES IN N-cadherin signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN dendrite membrane (ortholog); dendritic spine membrane (ortholog); early endosome membrane (ortholog) 2 9722741 9779350 - 22301074;30032202 116890950 MODEL JAAIVD010000001;XM_032891596 XP_032747487 sn1-specific diacylglycerol lipase alpha protein-coding 625857080 LOC116913756 endosome-associated-trafficking regulator 1-like 12 25004816 25006758 + 30032202 116913756 MODEL JAAIVD010000007;XM_032918063 XP_032773954 protein-coding 625857085 LOC116914136 small nucleolar RNA SNORA17 12 34072344 34072473 - 116914136 MODEL JAAIVD010000007;XR_004389697 snorna 625857088 LOC116911998 dnaJ homolog subfamily A member 3, mitochondrial-like 11 48757248 48757967 - 116911998 MODEL JAAIVD010000006 pseudo 625857089 LOC116899716 uncharacterized LOC116899716 1 53206616 53208331 + 116899716 MODEL JAAIVD010000025;XR_004387751 ncrna 625857093 LOC116899574 small EDRK-rich factor 2-like 1 51565198 51565400 - 116899574 MODEL JAAIVD010000025 pseudo 625857094 LOC116910425 interleukin-3 9 36725730 36728469 - 22301074 116910425 MODEL JAAIVD010000002;XM_032914269;XM_032914270 XP_032770160;XP_032770161 protein-coding 625857105 Ppig peptidylprolyl isomerase G ENCODES a protein that exhibits peptidyl-prolyl cis-trans isomerase activity (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN nuclear matrix (ortholog); nuclear speck (ortholog) 5 47023149 47051713 + 22301074;30032202 116901484 MODEL JAAIVD010000023;XM_032903439;XM_032903440;XM_032903441;XM_032903442;XM_032903443;XM_032903444;XM_032903445;XM_032903447;XM_032903448 XP_032759330;XP_032759331;XP_032759332;XP_032759333;XP_032759334;XP_032759335;XP_032759336;XP_032759338;XP_032759339 peptidyl-prolyl cis-trans isomerase G protein-coding 625857151 LOC116910189 uncharacterized LOC116910189 9 54913488 54919397 + 116910189 MODEL JAAIVD010000002;XR_004389141 ncrna 625857156 Wac WW domain containing adaptor with coiled-coil ENCODES a protein that exhibits chromatin binding (ortholog); RNA polymerase II complex binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); DNA damage response (ortholog); mitotic G1 DNA damage checkpoint signaling (ortholog); ASSOCIATED WITH DeSanto-Shinawi syndrome (ortholog); genetic disease (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN nucleoplasm (ortholog); spliceosomal complex (ortholog) 14 27947754 28008458 - 30032202 116883717 MODEL JAAIVD010000009;XM_032884933;XM_032884934;XM_032884936;XM_032884937;XM_032884938;XM_032884939;XM_032884940;XM_032884941;XM_032884942 XP_032740824;XP_032740825;XP_032740827;XP_032740828;XP_032740829;XP_032740830;XP_032740831;XP_032740832;XP_032740833 WW domain-containing adapter protein with coiled-coil protein-coding 625857192 Blvra biliverdin reductase A ENCODES a protein that exhibits biliberdin reductase (NADH) activity (ortholog); biliverdin reductase [NAD(P)H] activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN apoptotic DNA fragmentation (ortholog); canonical NF-kappaB signal transduction (ortholog); chemotaxis (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; hereditary coproporphyria pathway; ASSOCIATED WITH cholestasis (ortholog); COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); cytosol (ortholog) 5 105908551 105928074 + 22301074 116901925 MODEL JAAIVD010000023;XM_032904147;XM_032904148 XP_032760038;XP_032760039 protein-coding 625857208 Mrap melanocortin 2 receptor accessory protein ENCODES a protein that exhibits corticotropin hormone receptor binding (ortholog); identical protein binding (ortholog); type 1 melanocortin receptor binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); negative regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); negative regulation of protein localization to plasma membrane (ortholog); PARTICIPATES IN melanocortin system pathway; ASSOCIATED WITH adrenal gland disease (ortholog); genetic disease (ortholog); glucocorticoid deficiency 1 (ortholog); FOUND IN endoplasmic reticulum (ortholog); plasma membrane (ortholog) 4 53838011 53848614 - 30032202 116897982 MODEL JAAIVD010000003;XM_032899386 XP_032755277 melanocortin-2 receptor accessory protein protein-coding 625857215 Eif1b eukaryotic translation initiation factor 1B 8 111706228 111708925 + 22301074;30032202 116907945 MODEL JAAIVD010000027;XM_032911165 XP_032767056 protein-coding 625857223 LOC116894857 U6 spliceosomal RNA 2 38793581 38793683 - 116894857 MODEL JAAIVD010000001;XR_004387071 snrna 625857226 LOC116894152 uncharacterized LOC116894152 2 104852993 104888531 + 116894152 MODEL JAAIVD010000001;XR_004387020 ncrna 625857230 LOC116899867 small nucleolar RNA SNORA17 4 143581034 143581161 - 116899867 MODEL JAAIVD010000003;XR_004387861 snorna 625857233 Znf608 zinc finger protein 608 INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog) 15 75766745 75873841 - 30032202 116884984 MODEL JAAIVD010000010;XM_032886203;XM_032886204 XP_032742094;XP_032742095 protein-coding 625857249 Ankrd45 ankyrin repeat domain 45 INVOLVED IN cell population proliferation (ortholog); FOUND IN cleavage furrow (ortholog); cytoplasm (ortholog); cytosol (ortholog) 10 40446006 40461949 + 22301074 116911272 MODEL JAAIVD010000005;XM_032915176 XP_032771067 ankyrin repeat domain-containing protein 45 protein-coding 625857258 Kdm7a lysine demethylase 7A ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); histone H3K27me2/H3K27me3 demethylase activity (ortholog); histone H3K36 demethylase activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH melanoma (ortholog) 6 100584737 100649411 + 30032202 116903934 MODEL JAAIVD010000024;XM_032906712 XP_032762603 lysine-specific demethylase 7A protein-coding 625857282 LOC116909536 keratin-associated protein 4-12-like 9 54549611 54550183 - 22301074;30032202 116909536 MODEL JAAIVD010000002;XM_032913151;XM_032913153 XP_032769042;XP_032769044 protein-coding 625857289 Srpk2 SRSF protein kinase 2 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); ATP binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN angiogenesis (ortholog); intracellular signal transduction (ortholog); negative regulation of viral genome replication (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 6 152663209 152823701 - 22301074;30032202 116904189 MODEL JAAIVD010000024;XM_032907098;XM_032907099;XM_032907100;XM_032907101 XP_032762989;XP_032762990;XP_032762991;XP_032762992 protein-coding 625857318 Msrb3 methionine sulfoxide reductase B3 ENCODES a protein that exhibits peptide-methionine (R)-S-oxide reductase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN protein repair (ortholog); PARTICIPATES IN glycine N-methyltransferase deficiency pathway; homocystinuria pathway; hypermethioninemia pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 74 (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrion (ortholog) 1 198846995 198908926 - 22301074;30032202 116883301 MODEL JAAIVD010000025;XM_032884391 XP_032740282 methionine-R-sulfoxide reductase B3 protein-coding 625857329 LOC116902837 60S ribosomal protein L36a-like 6 90315497 90315866 - 22301074;30032202 116902837 MODEL JAAIVD010000024;XM_032905167 XP_032761058 protein-coding 625857334 Sra1 steroid receptor RNA activator 1 ENCODES a protein that exhibits nuclear androgen receptor binding (ortholog); steroid receptor RNA activator RNA binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN negative regulation of myoblast differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN estrogen signaling pathway; ASSOCIATED WITH congestive heart failure (ortholog); hypogonadotropic hypogonadism 7 with or without anosmia (ortholog); Kallmann syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 15 7715494 7719604 + 30032202 116884345 MODEL JAAIVD010000010;XM_032885480 XP_032741371 protein-coding 625857343 LOC116891640 40S ribosomal protein S5-like 2 88139643 88140352 - 116891640 MODEL JAAIVD010000001;XR_004386853 pseudo 625857346 LOC116902603 small nucleolar RNA SNORA17 5 57880688 57880808 + 116902603 MODEL JAAIVD010000023 pseudo 625857347 Ippk inositol-pentakisphosphate 2-kinase ENCODES a protein that exhibits inositol-1,3,4,5,6-pentakisphosphate 2-kinase activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN positive regulation of transcription of nucleolar large rRNA by RNA polymerase I (ortholog); PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; FOUND IN nucleolus (ortholog) 14 68403022 68441738 + 22301074;30032202 116883420 MODEL JAAIVD010000009;XM_032884548;XM_032884549 XP_032740439;XP_032740440 protein-coding 625857368 Tagln transgelin INVOLVED IN cellular response to platelet-derived growth factor stimulus (ortholog); epithelial cell differentiation (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH aortic dissection (ortholog); Carotid Artery Injuries (ortholog); Colonic Neoplasms (ortholog) 8 40450401 40455927 - 22301074 116906704 MODEL JAAIVD010000027;XM_032909508 XP_032765399 protein-coding 625857377 Alg3 ALG3 alpha-1,3- mannosyltransferase ENCODES a protein that exhibits dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation Id (ortholog); epilepsy (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 4 5430172 5435491 - 30032202 116898696 MODEL JAAIVD010000003;XM_032899957;XM_032899958 XP_032755848;XP_032755849 dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase protein-coding 625857393 Nucks1 nuclear casein kinase and cyclin dependent kinase substrate 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN cellular response to X-ray (ortholog); chromatin organization (ortholog); double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleolus (ortholog) 10 3908113 3936761 - 30032202 116910982 MODEL JAAIVD010000005;XM_032914693;XM_032914695 XP_032770584;XP_032770586 nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 protein-coding 625857408 Trnad-guc transfer RNA aspartic acid (anticodon GUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 1 170259067 170259138 - 116890647 MODEL JAAIVD010000025 trna 625857409 Suco SUN domain containing ossification factor INVOLVED IN positive regulation of collagen biosynthetic process (ortholog); positive regulation of osteoblast differentiation (ortholog); regulation of bone remodeling (ortholog); ASSOCIATED WITH osteogenesis imperfecta type 5 (ortholog); FOUND IN membrane (ortholog); rough endoplasmic reticulum (ortholog) 10 41118182 41182540 - 30032202 116910878 MODEL JAAIVD010000005;XM_032914643;XM_032914644;XM_032914645;XM_032914646;XM_032914647;XM_032914648;XR_004389289 XP_032770534;XP_032770535;XP_032770536;XP_032770537;XP_032770538;XP_032770539 SUN domain-containing ossification factor protein-coding 625857451 LOC116915028 neutrophil antibiotic peptide NP-2-like 13 64843794 64844635 - 22301074;30032202 116915028 MODEL JAAIVD010000008;XM_032919436 XP_032775327 protein-coding 625857455 Ddias DNA damage induced apoptosis suppressor INVOLVED IN cellular response to cytokine stimulus (ortholog); cellular response to gamma radiation (ortholog); cellular response to hydroperoxide (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 2 108320533 108344355 + 30032202 116891842 MODEL JAAIVD010000001;XM_032893209 XP_032749100 DNA damage-induced apoptosis suppressor protein protein-coding 625857465 Cdhr3 cadherin related family member 3 ASSOCIATED WITH allergic disease (ortholog); asthma (ortholog); bacterial infectious disease (ortholog); FOUND IN plasma membrane (ortholog) 7 46379159 46439272 - 22301074 116905665 MODEL JAAIVD010000026;XM_032908649 XP_032764540 cadherin-related family member 3 protein-coding 625857486 LOC116896242 aminoacyl tRNA synthase complex-interacting multifunctional protein 1-like 3 27572494 27573488 + 116896242 MODEL JAAIVD010000012 pseudo 625857487 Ap2b1 adaptor related protein complex 2 subunit beta 1 ENCODES a protein that exhibits clathrin binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN aorta development (ortholog); cardiac septum development (ortholog); clathrin coat assembly (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH middle cerebral artery infarction (ortholog); FOUND IN AP-2 adaptor complex (ortholog); clathrin adaptor complex (ortholog); clathrin coat (ortholog) 9 87279064 87384500 - 22301074;30032202 116909236 MODEL JAAIVD010000002;XM_032912737;XM_032912739;XM_032912740;XM_032912741;XM_032912742 XP_032768628;XP_032768630;XP_032768631;XP_032768632;XP_032768633 AP-2 complex subunit beta protein-coding 625857526 C3H4orf17 chromosome 3 C4orf17 homolog 3 20976366 20991982 + 116895302 MODEL JAAIVD010000012;XM_032896614 XP_032752505 uncharacterized protein C4orf17 homolog protein-coding 625857535 Ubfd1 ubiquitin family domain containing 1 2 79733882 79760952 - 30032202 116891560 MODEL JAAIVD010000001;XM_032892737;XM_032892738;XM_032892739;XM_032892740 XP_032748628;XP_032748629;XP_032748630;XP_032748631 ubiquitin domain-containing protein UBFD1 protein-coding 625857556 Cdk17 cyclin dependent kinase 17 ASSOCIATED WITH multiple sclerosis (ortholog) 1 172222546 172298964 + 22301074;30032202;9370357 116908184 MODEL AB005540;JAAIVD010000025;XM_032911475 BAA22332;XP_032767366 PCTAIRE2 cyclin-dependent kinase 17 protein-coding 625857577 Nme6 NME/NM23 nucleoside diphosphate kinase 6 ENCODES a protein that exhibits nucleoside diphosphate kinase activity (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of mitotic nuclear division (ortholog); nucleotide metabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 8 100454195 100460025 + 22301074;30032202 116907795 MODEL JAAIVD010000027;XM_032910936;XM_032910937;XM_032910938;XM_032910939;XM_032910941;XM_032910942 XP_032766827;XP_032766828;XP_032766829;XP_032766830;XP_032766832;XP_032766833 nucleoside diphosphate kinase 6 protein-coding 625857602 Mdm4 MDM4 regulator of p53 ENCODES a protein that exhibits enzyme activator activity (ortholog); enzyme binding (ortholog); INVOLVED IN atrial septum development (ortholog); atrioventricular valve morphogenesis (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN altered p53 signaling pathway; p53 signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Bone Marrow Failure Syndrome 6 (ortholog); Breast Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog) 10 2817249 2851805 + 22301074;30032202 116911707 MODEL JAAIVD010000005;XM_032915671;XM_032915672 XP_032771562;XP_032771563 protein Mdm4 protein-coding 625857620 Abitram actin binding transcription modulator ENCODES a protein that exhibits actin filament binding (ortholog); actin monomer binding (ortholog); INVOLVED IN dendrite morphogenesis (ortholog); regulation of actin filament polymerization (ortholog); regulation of filopodium assembly (ortholog); FOUND IN dendrite (ortholog); filopodium tip (ortholog); growth cone (ortholog) 1 94808985 94814091 - 30032202 116901682 MODEL JAAIVD010000025;XM_032903808 XP_032759699 protein Abitram protein-coding 625857630 LOC116889783 zinc finger protein 501-like 30032202 116889783 MODEL JAAIVD010000269;XM_032890635 XP_032746526 protein-coding 625857631 LOC116900146 olfactory receptor 5C1 5 14908632 14912348 + 22301074;30032202 116900146 MODEL JAAIVD010000023;XM_032901920 XP_032757811 protein-coding 625857637 Ccdc194 coiled-coil domain containing 194 13 13465365 13468363 + 116914461 MODEL JAAIVD010000008;XM_032918761 XP_032774652 coiled-coil domain-containing protein 194 protein-coding 625857643 LOC116890308 U4 spliceosomal RNA 1 271353389 271353518 + 116890308 MODEL JAAIVD010000025 pseudo 625857644 Znf18 zinc finger protein 18 9 45411688 45435134 + 30032202 116910517 MODEL JAAIVD010000002;XM_032914419 XP_032770310 protein-coding 625857655 LOC116885889 zinc finger protein 25-like 16 14837572 14857433 - 22301074 116885889 MODEL JAAIVD010000004;XM_032887212 XP_032743103 protein-coding 625857664 Ldhal6b lactate dehydrogenase A like 6B INVOLVED IN lactate metabolic process (ortholog); PARTICIPATES IN malonic aciduria pathway; methylmalonic aciduria, cobalamin-related pathway; propanoate metabolic pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog) 2 193393060 193394477 + 22301074 116892860 MODEL JAAIVD010000001;XM_032894756;XM_032894757 XP_032750647;XP_032750648 L-lactate dehydrogenase A-like 6B protein-coding 625857674 Mall mal, T cell differentiation protein like FOUND IN clathrin-coated vesicle (ortholog); cytoplasmic vesicle (ortholog); Golgi membrane (ortholog) 5 106486462 106511001 - 22301074;30032202 116901940 MODEL JAAIVD010000023;XM_032904171 XP_032760062 MAL-like protein protein-coding 625857682 LOC116912498 uncharacterized LOC116912498 11 18711310 18713583 + 116912498 MODEL JAAIVD010000006;XR_004389465 ncrna 625857686 LOC116905664 neurexin-3-beta 7 103048944 103574571 + 116905664 MODEL JAAIVD010000026;XM_032908640;XM_032908641;XM_032908642;XM_032908643;XM_032908645;XM_032908646;XM_032908647;XM_032908648 XP_032764531;XP_032764532;XP_032764533;XP_032764534;XP_032764536;XP_032764537;XP_032764538;XP_032764539 protein-coding 625857707 Tsnare1 t-SNARE domain containing 1 1 247180326 247181222 - 30032202 116889926 MODEL JAAIVD010000025;XM_032890742 XP_032746633 t-SNARE domain-containing protein 1 protein-coding 625857711 Msl3 MSL complex subunit 3 ENCODES a protein that exhibits DNA binding (ortholog); histone H4K16ac reader activity (ortholog); histone reader activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Basilicata-Akhtar syndrome (ortholog); Craniofacial Abnormalities (ortholog); Developmental Disabilities (ortholog); FOUND IN MSL complex (ortholog); nucleus (ortholog) X 28065980 28083302 + 30032202 116888282 MODEL JAAIVD010000014;XM_032889561 XP_032745452 male-specific lethal 3 homolog protein-coding 625857728 LOC116885722 40S ribosomal protein S26-like 16 9948418 9948838 + 116885722 MODEL JAAIVD010000004 pseudo 625857729 Acsbg2 acyl-CoA synthetase bubblegum family member 2 ENCODES a protein that exhibits arachidonate-CoA ligase activity (ortholog); fatty acyl-CoA hydrolase activity (ortholog); long-chain fatty acid-CoA ligase activity (ortholog); INVOLVED IN fatty acid metabolic process (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 4 88224983 88254695 - 30032202 116899200 MODEL JAAIVD010000003;XM_032900785 XP_032756676 long-chain-fatty-acid--CoA ligase ACSBG2 protein-coding 625857748 LOC116912696 importin subunit alpha-4-like 11 18899402 18905587 - 22301074;30032202 116912696 MODEL JAAIVD010000006;XM_032916827 XP_032772718 protein-coding 625857754 Prdx1 peroxiredoxin 1 ENCODES a protein that exhibits heme binding (ortholog); identical protein binding (ortholog); peroxidase activity (ortholog); INVOLVED IN cell population proliferation (ortholog); erythrocyte homeostasis (ortholog); hydrogen peroxide catabolic process (ortholog); ASSOCIATED WITH asbestosis (ortholog); COVID-19 (ortholog); Esophageal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); euchromatin (ortholog); mitochondrial matrix (ortholog) 1 40326188 40336515 + 30032202 116898445 MODEL JAAIVD010000025;XM_032899713 XP_032755604 peroxiredoxin-1 protein-coding 625857764 Rplp0 ribosomal protein lateral stalk subunit P0 ENCODES a protein that exhibits peptide binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to interleukin-4 (ortholog); cellular response to phorbol 13-acetate 12-myristate (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Down syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); cytosol (ortholog) 16 38264591 38267967 - 1742361;22301074;30032202 116885424 MODEL JAAIVD010000004;X15096;XM_032886710 CAA33199;XP_032742601 60S acidic ribosomal protein P0 protein-coding 625857775 LOC116912994 small nucleolar RNA SNORA17 11 68460956 68461085 - 116912994 MODEL JAAIVD010000006;XR_004389557 snorna 625857778 LOC116883935 glyceraldehyde-3-phosphate dehydrogenase-like 14 3473085 3474070 + 116883935 MODEL JAAIVD010000009 pseudo 625857779 LOC116904286 immunoglobulin kappa variable 2-29-like 6 42461761 42462558 + 116904286 MODEL JAAIVD010000024 pseudo 625857780 Usp19 ubiquitin specific peptidase 19 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); Hsp90 protein binding (ortholog); K48-linked deubiquitinase activity (ortholog); INVOLVED IN ERAD pathway (ortholog); negative regulation of proteasomal protein catabolic process (ortholog); negative regulation of skeletal muscle tissue development (ortholog); ASSOCIATED WITH generalized epilepsy (ortholog); long QT syndrome (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum membrane (ortholog) 8 99824616 99834985 + 22301074 116907593 MODEL JAAIVD010000027;XM_032910634 XP_032766525 ubiquitin carboxyl-terminal hydrolase 19 protein-coding 625857810 Smim38 small integral membrane protein 38 2 4529547 4530048 + 116893605 MODEL JAAIVD010000001;XM_032895313 XP_032751204 protein-coding 625857813 Pdik1l PDLIM1 interacting kinase 1 like FOUND IN nucleoplasm (ortholog) 1 23957876 23968725 + 22301074;30032202 116894797 MODEL JAAIVD010000025;XM_032896456 XP_032752347 serine/threonine-protein kinase PDIK1L protein-coding 625857820 Sst somatostatin ENCODES a protein that exhibits identical protein binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN hyperosmotic response (ortholog); regulation of cell migration (ortholog); regulation of postsynaptic membrane neurotransmitter receptor levels (ortholog); PARTICIPATES IN cimetidine pharmacodynamics pathway; esomeprazole pharmacodynamics pathway; famotidine pharmacodynamics pathway; ASSOCIATED WITH Barrett's esophagus (ortholog); disease of cellular proliferation (ortholog); endometriosis (ortholog); FOUND IN cytosol (ortholog); extracellular region (ortholog); GABA-ergic synapse (ortholog) 4 8680393 8681663 - 22301074;30032202 116898730 MODEL JAAIVD010000003;XM_032900037 XP_032755928 protein-coding 625857826 Il17rb interleukin 17 receptor B INVOLVED IN positive regulation of inflammatory response (ortholog); positive regulation of interleukin-13 production (ortholog); positive regulation of interleukin-5 production (ortholog); ASSOCIATED WITH asthma (ortholog); interstitial lung disease (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) 13 5711294 5723870 - 30032202 116914818 MODEL JAAIVD010000008;XM_032919275 XP_032775166 interleukin-17 receptor B protein-coding 625857841 LOC116902744 cytochrome P450 2C55-like 6 59984328 59994106 + 22301074;30032202 116902744 MODEL JAAIVD010000024;XM_032905092 XP_032760983 protein-coding 625857847 Ebpl EBP like FOUND IN endoplasmic reticulum (ortholog) 12 63053878 63077209 + 30032202 116913782 MODEL JAAIVD010000007;XM_032918088 XP_032773979 emopamil-binding protein-like protein-coding 625857855 Tmem38b transmembrane protein 38B INVOLVED IN bone development (ortholog); bone mineralization (ortholog); cellular response to caffeine (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); genetic disease (ortholog); osteogenesis imperfecta (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 1 97587575 97622963 + 22301074;30032202 116901841 MODEL JAAIVD010000025;XM_032904026 XP_032759917 trimeric intracellular cation channel type B protein-coding 625857865 Trnan-auu transfer RNA asparagine (anticodon AUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 10 13303665 13303739 + 116911914 MODEL JAAIVD010000005 trna 625857866 LOC116889525 small nucleolar RNA SNORA17 X 74702965 74703089 - 116889525 MODEL JAAIVD010000014 pseudo 625857867 Morn4 MORN repeat containing 4 INVOLVED IN response to axon injury (ortholog); FOUND IN cytoplasm (ortholog); filopodium tip (ortholog); stereocilium tip (ortholog) 2 41192635 41194562 - 116891173 MODEL JAAIVD010000001;XM_032891987 XP_032747878 MORN repeat-containing protein 4 protein-coding 625857875 LOC116900640 40S ribosomal protein S15-like 5 110829530 110830037 + 22301074;30032202 116900640 MODEL JAAIVD010000023;XM_032902351 XP_032758242 protein-coding 625857880 Rab6a RAB6A, member RAS oncogene family ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); G protein activity (ortholog); INVOLVED IN antigen processing and presentation (ortholog); early endosome to Golgi transport (ortholog); peptidyl-cysteine methylation (ortholog); FOUND IN acrosomal membrane (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) 2 98908736 98946349 + 22301074 116891746 MODEL JAAIVD010000001;XM_032893055;XM_032893057 XP_032748946;XP_032748948 ras-related protein Rab-6A protein-coding 625857896 Nit1 nitrilase 1 ENCODES a protein that exhibits deaminated glutathione amidase activity (ortholog); INVOLVED IN obsolete amide catabolic process (ortholog); ASSOCIATED WITH brain small vessel disease 4 (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) 10 50507204 50510660 - 22301074 116910851 MODEL JAAIVD010000005;XM_032914608 XP_032770499 deaminated glutathione amidase protein-coding 625857906 Rpgr retinitis pigmentosa GTPase regulator ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN cellular response to light stimulus (ortholog); cilium assembly (ortholog); eye photoreceptor cell development (ortholog); PARTICIPATES IN retinitis pigmentosa pathway; ASSOCIATED WITH Ciliary Motility Disorders (ortholog); cone dystrophy (ortholog); cone-rod dystrophy (ortholog); FOUND IN cell projection (ortholog); centrosome (ortholog); ciliary basal body (ortholog) X 11048535 11135423 + 30032202 116888359 MODEL JAAIVD010000014;XM_032889628 XP_032745519 X-linked retinitis pigmentosa GTPase regulator protein-coding 625857917 LOC116891149 thymosin beta-4 1 3416691 3417188 + 22301074;30032202 116891149 MODEL JAAIVD010000025;XM_032891936 XP_032747827 protein-coding 625857922 Tom1 target of myb1 membrane trafficking protein ENCODES a protein that exhibits clathrin binding (ortholog); clathrin heavy chain binding (ortholog); myosin VI binding (ortholog); INVOLVED IN autophagosome-lysosome fusion (ortholog); endosomal transport (ortholog); positive regulation of autophagosome maturation (ortholog); ASSOCIATED WITH immunodeficiency 85 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); early endosome (ortholog) 17 4419819 4454179 + 22301074;30032202 116886337 MODEL JAAIVD010000011;XM_032887790 XP_032743681 target of Myb protein 1 protein-coding 625857941 LOC116892767 olfactory receptor 10A3-like 2 182574427 182575384 + 116892767 MODEL JAAIVD010000001 pseudo 625857942 Pcnp PEST proteolytic signal containing nuclear protein INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein ubiquitination (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 4 40148269 40162306 - 22301074;30032202 116898901 MODEL JAAIVD010000003;XM_032900299;XM_032900300;XM_032900301;XM_032900302 XP_032756190;XP_032756191;XP_032756192;XP_032756193 PEST proteolytic signal-containing nuclear protein protein-coding 625857959 Tmem88 transmembrane protein 88 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); protein localization to plasma membrane (ortholog); protein stabilization (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) 9 49008747 49010488 - 30032202 116910605 MODEL JAAIVD010000002;XM_032914547 XP_032770438 protein-coding 625857965 LOC116883619 heat shock cognate 71 kDa protein-like 14 20257178 20259159 - 116883619 MODEL JAAIVD010000009 pseudo 625857966 Nsun7 NOP2/Sun RNA methyltransferase family member 7 INVOLVED IN flagellated sperm motility (ortholog); sperm mitochondrion organization (ortholog); ASSOCIATED WITH male infertility (ortholog); FOUND IN cytoplasm (ortholog) 11 23363076 23420160 + 22301074 116912896 MODEL JAAIVD010000006;XM_032917154 XP_032773045 putative methyltransferase NSUN7 protein-coding 625857983 LOC116912419 eukaryotic translation initiation factor 3 subunit C-like 11 585680 588691 + 22301074;30032202 116912419 MODEL JAAIVD010000006;XM_032916485 XP_032772376 protein-coding 625857988 Lman2 lectin, mannose binding 2 ENCODES a protein that exhibits carbohydrate binding (ortholog); D-mannose binding (ortholog); heat shock protein binding (ortholog); INVOLVED IN positive regulation of phagocytosis (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); FOUND IN cell surface (ortholog); COPI-coated vesicle (ortholog); cytoplasmic vesicle (ortholog) 14 73667447 73685401 - 30032202 116883332 MODEL JAAIVD010000009;XM_032884403 XP_032740294 vesicular integral-membrane protein VIP36 protein-coding 625858000 Tnik TRAF2 and NCK interacting kinase ENCODES a protein that exhibits protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cytoskeleton organization (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH Arsenic Poisoning (ortholog); autosomal recessive intellectual developmental disorder 54 (ortholog); colorectal cancer (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytoskeleton (ortholog) 3 126006757 126399096 - 22301074 116896986 MODEL JAAIVD010000012;XM_032898578 XP_032754469 TRAF2 and NCK-interacting protein kinase protein-coding 625858037 LOC116907139 C-type lectin domain family 4 member A 8 10994162 11010863 - 116907139 MODEL JAAIVD010000027;XM_032910109;XM_032910110 XP_032766000;XP_032766001 protein-coding 625858053 Tm6sf2 transmembrane 6 superfamily member 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN regulation of lipid metabolic process (ortholog); ASSOCIATED WITH alcoholic liver cirrhosis (ortholog); metabolic dysfunction-associated steatotic liver disease (ortholog); myocardial infarction (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment membrane (ortholog) 13 12339327 12347055 + 30032202 116914853 MODEL JAAIVD010000008;XM_032919303 XP_032775194 protein-coding 625858067 LOC116914110 small nucleolar RNA SNORA51 12 90475016 90475128 + 116914110 MODEL JAAIVD010000007 pseudo 625858068 LOC116893239 60S ribosomal protein L36-like 2 124674255 124674610 + 116893239 MODEL JAAIVD010000001 pseudo 625858069 LOC116905025 uncharacterized LOC116905025 7 64202061 64204221 - 116905025 MODEL JAAIVD010000026;XR_004388479 ncrna 625858073 LOC116895017 small nucleolar RNA SNORA48 2 2647562 2647696 - 116895017 MODEL JAAIVD010000001 pseudo 625858074 LOC116900129 olfactory receptor 50 5 14501509 14502447 + 22301074;30032202 116900129 MODEL JAAIVD010000023;XM_032901903 XP_032757794 protein-coding 625858077 LOC116914502 arylamine N-acetyltransferase 1 13 21860069 21874624 - 22301074;30032202 116914502 MODEL JAAIVD010000008;XM_032918819;XM_032918821;XM_032918822;XM_032918823 XP_032774710;XP_032774712;XP_032774713;XP_032774714 protein-coding 625858092 Pomgnt2 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); protein O-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN neuron migration (ortholog); protein O-linked glycosylation (ortholog); protein O-linked glycosylation via mannose (ortholog); ASSOCIATED WITH congenital muscular dystrophy-dystroglycanopathy type A8 (ortholog); exotropia (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog) 8 113141940 113157748 - 22301074;30032202 116907989 MODEL JAAIVD010000027;XM_032911235;XM_032911236 XP_032767126;XP_032767127 protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 protein-coding 625858100 LOC116915024 tubulin alpha-1B chain-like 13 229997 231503 + 116915024 MODEL JAAIVD010000008;XR_004389790 pseudo 625858103 LOC116884707 luc7-like protein 3 15 64528094 64529329 - 116884707 MODEL JAAIVD010000010 pseudo 625858104 LOC116888306 ubiquitin-40S ribosomal protein S27a-like X 31725282 31725752 - 22301074;30032202 116888306 MODEL JAAIVD010000014;XM_032889579 XP_032745470 protein-coding 625858107 LOC116904547 killer cell lectin-like receptor 4 6 17298250 17317563 - 116904547 MODEL JAAIVD010000024;XM_032907341;XM_032907342;XM_032907343;XM_032907344 XP_032763232;XP_032763233;XP_032763234;XP_032763235 protein-coding 625858124 Chad chondroadherin INVOLVED IN bone development (ortholog); cartilage condensation (ortholog); negative regulation of bone trabecula formation (ortholog) 9 50974939 50978790 - 22301074;30032202 116909284 MODEL JAAIVD010000002;XM_032912821 XP_032768712 protein-coding 625858132 LOC116883718 NUT family member 2-like 14 69164715 69172124 - 116883718 MODEL JAAIVD010000009;XM_032884943 XP_032740834 protein-coding 625858141 LOC116912509 60S ribosomal protein L19-like 11 98517395 98517998 - 116912509 MODEL JAAIVD010000006 pseudo 625858142 Mapk8ip2 mitogen-activated protein kinase 8 interacting protein 2 ENCODES a protein that exhibits kinesin binding (ortholog); MAP kinase scaffold activity (ortholog); protein kinase activator activity (ortholog); INVOLVED IN behavioral fear response (ortholog); dendrite morphogenesis (ortholog); JNK cascade (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; p38 MAPK signaling pathway; FOUND IN cytoplasm (ortholog); neuronal cell body (ortholog); postsynaptic density (ortholog) 1 258759019 258769603 + 22301074;30032202 116915188 MODEL JAAIVD010000025;XM_032919570 XP_032775461 C-Jun-amino-terminal kinase-interacting protein 2 protein-coding 625858158 LOC116914576 ATP synthase subunit d, mitochondrial-like 13 44055144 44055662 - 22301074;30032202 116914576 MODEL JAAIVD010000008;XM_032918935 XP_032774826 protein-coding 625858162 Tubgcp2 tubulin gamma complex component 2 INVOLVED IN brain development (ortholog); neuron migration (ortholog); ASSOCIATED WITH pachygyria, microcephaly, developmental delay, and dysmorphic facies, with or without seizures (ortholog); FOUND IN centrosome (ortholog); microtubule organizing center (ortholog) 2 61834632 61860243 + 22301074;30032202 116891354 MODEL JAAIVD010000001;XM_032892347;XM_032892348;XM_032892349 XP_032748238;XP_032748239;XP_032748240 gamma-tubulin complex component 2;tubulin gamma complex associated protein 2 protein-coding 625858190 LOC116887702 class I histocompatibility antigen, Gogo-A*0501 alpha chain-like 18 9688926 9690855 - 30032202 116887702 MODEL JAAIVD010000013;XM_032889300 XP_032745191 protein-coding 625858198 LOC116893212 phosphoglycerate kinase 1-like 2 112210310 112243818 + 116893212 MODEL JAAIVD010000001 pseudo 625858199 Mmachc metabolism of cobalamin associated C ENCODES a protein that exhibits cyanocobalamin reductase (cyanide-eliminating) (NADP+) activity (ortholog); demethylase activity (ortholog); FAD binding (ortholog); INVOLVED IN cobalamin metabolic process (ortholog); demethylation (ortholog); glutathione metabolic process (ortholog); ASSOCIATED WITH atypical hemolytic-uremic syndrome (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 1 40339969 40346059 - 30032202 116898456 MODEL JAAIVD010000025;XM_032899716 XP_032755607 methylmalonic aciduria and homocystinuria type C protein protein-coding 625858207 LOC116902637 small nucleolar RNA U13 5 95070967 95071076 + 116902637 MODEL JAAIVD010000023;XR_004388214 snorna 625858210 Acad8 acyl-CoA dehydrogenase family member 8 PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH Disease Progression (ortholog); genetic disease (ortholog); Isobutyryl-CoA Dehydrogenase Deficiency (ortholog); FOUND IN mitochondrion (ortholog) 8 22869360 22893140 - 22301074 116906962 MODEL JAAIVD010000027;XM_032909883 XP_032765774 isobutyryl-CoA dehydrogenase, mitochondrial protein-coding 625858225 Use1 unconventional SNARE in the ER 1 INVOLVED IN endoplasmic reticulum organization (ortholog); endoplasmic reticulum tubular network organization (ortholog); regulation of ER to Golgi vesicle-mediated transport (ortholog); FOUND IN COPI-coated vesicle (ortholog); endoplasmic reticulum (ortholog); SNARE complex (ortholog) 13 13631808 13634454 - 30032202 116915100 MODEL JAAIVD010000008;XM_032919528;XM_032919529 XP_032775419;XP_032775420 vesicle transport protein USE1 protein-coding 625858239 LOC116903774 uncharacterized LOC116903774 6 15999255 16006806 + 116903774 MODEL JAAIVD010000024;XM_032906464 XP_032762355 uncharacterized protein LOC116903774 protein-coding 625858247 LOC116888395 uncharacterized LOC116888395 X 39000836 39003093 + 30032202 116888395 MODEL JAAIVD010000014;XM_032889669 XP_032745560 uncharacterized protein LOC116888395 protein-coding 625858251 Ppfibp1 PPFIB scaffold protein 1 INVOLVED IN cortical microtubule organization (ortholog); ASSOCIATED WITH epilepsy (ortholog); genetic disease (ortholog); Neurodevelopmental Disorder with Seizures, Microcephaly, and Brain Abnormalities (ortholog); FOUND IN cell cortex (ortholog); plasma membrane (ortholog) 6 4561125 4700446 + 22301074;30032202 116903098 MODEL JAAIVD010000024;XM_032905420;XM_032905421 XP_032761311;XP_032761312 PPFIA binding protein 1;liprin-beta-1 protein-coding 625858290 LOC116890965 density-regulated protein 2 10112689 10113469 + 22301074;30032202 116890965 MODEL JAAIVD010000001;XM_032891626 XP_032747517 protein-coding 625858295 Rnf40 ring finger protein 40 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); protein homodimerization activity (ortholog); syntaxin-1 binding (ortholog); INVOLVED IN positive regulation of proteasomal protein catabolic process (ortholog); positive regulation of protein polyubiquitination (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; ASSOCIATED WITH nephrogenic diabetes insipidus (ortholog); FOUND IN HULC complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 74296679 74312025 - 22301074;30032202 116891465 MODEL JAAIVD010000001;XM_032892555;XM_032892556 XP_032748446;XP_032748447 E3 ubiquitin-protein ligase BRE1B protein-coding 625858321 Kcnj13 potassium inwardly rectifying channel subfamily J member 13 ENCODES a protein that exhibits inward rectifier potassium channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN intracellular potassium ion homeostasis (ortholog); potassium ion transmembrane transport (ortholog); regulation of membrane potential (ortholog); ASSOCIATED WITH Leber congenital amaurosis 16 (ortholog); snowflake vitreoretinal degeneration (ortholog); FOUND IN plasma membrane (ortholog) 4 159518435 159526557 - 22301074;30032202 116899605 MODEL JAAIVD010000003;XM_032901561 XP_032757452 inward rectifier potassium channel 13 protein-coding 625858328 Tp53i3 tumor protein p53 inducible protein 3 ENCODES a protein that exhibits quinone reductase (NADPH) activity (ortholog); INVOLVED IN apoptotic process (ortholog); reactive oxygen species biosynthetic process (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); autism spectrum disorder (ortholog); carcinoma (ortholog) 7 25448953 25460752 + 30032202 116905638 MODEL JAAIVD010000026;XM_032908616 XP_032764507 quinone oxidoreductase PIG3 protein-coding 625858338 LOC116894466 galectin-7 2 167138459 167141586 - 22301074 116894466 MODEL JAAIVD010000001;XM_032896177 XP_032752068 protein-coding 625858347 Cyrib CYFIP related Rac1 interactor B ENCODES a protein that exhibits MHC class Ib protein binding, via antigen binding groove (ortholog); small GTPase binding (ortholog); INVOLVED IN cellular response to molecule of bacterial origin (ortholog); negative regulation of actin filament polymerization (ortholog); negative regulation of small GTPase mediated signal transduction (ortholog); ASSOCIATED WITH diastolic heart failure (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cilium (ortholog); mitochondrion (ortholog) 1 238158043 238284855 - 22301074;30032202 116912101 MODEL JAAIVD010000025;XM_032916001;XM_032916009;XM_032916017;XM_032916024;XM_032916032;XM_032916039;XM_032916048 XP_032771892;XP_032771900;XP_032771908;XP_032771915;XP_032771923;XP_032771930;XP_032771939 protein FAM49B protein-coding 625858379 LOC116904825 U6 spliceosomal RNA 6 34917499 34917603 - 116904825 MODEL JAAIVD010000024;XR_004388474 snrna 625858382 Nln neurolysin ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); oligopeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN peptide catabolic process (ortholog); protein catabolic process (ortholog); regulation of gluconeogenesis (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytosol (ortholog); mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) 3 193258751 193350025 + 22301074;30032202 116897234 MODEL JAAIVD010000012;XM_032898958 XP_032754849 neurolysin, mitochondrial protein-coding 625858399 LOC116893480 zinc finger protein 665-like 2 180772910 180773639 - 116893480 MODEL JAAIVD010000001 pseudo 625858400 LOC116889510 small nucleolar RNA SNORA17 X 93227228 93227354 - 116889510 MODEL JAAIVD010000014;XR_004386455 snorna 625858403 Cnmd chondromodulin INVOLVED IN endothelial cell morphogenesis (ortholog); negative regulation of angiogenesis (ortholog); negative regulation of endothelial cell proliferation (ortholog) 12 44683146 44708184 + 30032202 116913443 MODEL JAAIVD010000007;XM_032917642;XM_032917643 XP_032773533;XP_032773534 leukocyte cell-derived chemotaxin 1 protein-coding 625858418 Tbx22 T-box transcription factor 22 ENCODES a protein that exhibits DNA binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Abruzzo-Erickson syndrome (ortholog); cleft palate (ortholog); Cleft Palate with Ankyloglossia (ortholog); FOUND IN nucleus (ortholog) X 61303568 61321752 - 22301074;30032202 116888949 MODEL JAAIVD010000014;XM_032890179;XM_032890181 XP_032746070;XP_032746072 T-box transcription factor TBX22 protein-coding 625858432 Kcnk4 potassium two pore domain channel subfamily K member 4 ENCODES a protein that exhibits identical protein binding (ortholog); mechanosensitive potassium channel activity (ortholog); outward rectifier potassium channel activity (ortholog); INVOLVED IN cellular response to acidic pH (ortholog); cellular response to alkaline pH (ortholog); cellular response to arachidonate (ortholog); ASSOCIATED WITH Facial Dysmorphism, Hypertrichosis, Epilepsy, Intellectual/Developmental Delay, and Gingival Overgrowth Syndrome (ortholog); FOUND IN node of Ranvier (ortholog); plasma membrane (ortholog); potassium channel complex (ortholog) 2 860319 868810 + 22301074;30032202 116894817 MODEL JAAIVD010000001;XM_032896487;XM_032896488;XM_032896489;XM_032896490 XP_032752378;XP_032752379;XP_032752380;XP_032752381 potassium channel subfamily K member 4 protein-coding 625858451 LOC116908410 small nucleolar RNA SNORA17 8 64514388 64514518 - 116908410 MODEL JAAIVD010000027;XR_004388952 snorna 625858454 Inmt indolethylamine N-methyltransferase ENCODES a protein that exhibits amine N-methyltransferase activity (ortholog); thioether S-methyltransferase activity (ortholog); INVOLVED IN amine metabolic process (ortholog); methylation (ortholog); PARTICIPATES IN tryptophan metabolic pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); prostate cancer (ortholog); FOUND IN cytosol (ortholog) 6 85888502 85892824 + 30032202 116902823 MODEL JAAIVD010000024;XM_032905153 XP_032761044 protein-coding 625858461 Ap1g2 adaptor related protein complex 1 subunit gamma 2 FOUND IN Golgi-associated vesicle (ortholog); membrane (ortholog); synapse (ortholog) 12 69891761 69899337 + 22301074;30032202 116913498 MODEL JAAIVD010000007;XM_032917699;XM_032917700 XP_032773590;XP_032773591 AP-1 complex subunit gamma-like 2 protein-coding 625858490 Trnas-aga transfer RNA serine (anticodon AGA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 48629546 48629627 + 116910797 MODEL JAAIVD010000002 trna 625858491 Trim9 tripartite motif containing 9 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein homodimerization activity (ortholog); SNARE binding (ortholog); INVOLVED IN negative regulation of calcium ion-dependent exocytosis (ortholog); negative regulation of dense core granule exocytosis (ortholog); negative regulation of SNARE complex assembly (ortholog); FOUND IN cytoplasm (ortholog); cytoskeleton (ortholog); dendrite (ortholog) 7 83924177 84023634 - 22301074 116905132 MODEL JAAIVD010000026;XM_032907883;XM_032907884;XM_032907885;XM_032907886;XM_032907888;XM_032907889;XM_032907890;XM_032907891;XM_032907892;XM_032907893 XP_032763774;XP_032763775;XP_032763776;XP_032763777;XP_032763779;XP_032763780;XP_032763781;XP_032763782;XP_032763783;XP_032763784 E3 ubiquitin-protein ligase TRIM9 protein-coding 625858527 LOC116911075 60S ribosomal protein L5-like 10 32613493 32614225 - 116911075 MODEL JAAIVD010000005 pseudo 625858528 LOC116890526 small nucleolar RNA SNORA17 1 149493704 149493831 - 116890526 MODEL JAAIVD010000025;XR_004386708 snorna 625858531 LOC116910658 small nucleolar RNA SNORA70 9 2571313 2571448 + 116910658 MODEL JAAIVD010000002;XR_004389192 snorna 625858534 Dnttip2 deoxynucleotidyltransferase terminal interacting protein 2 INVOLVED IN ribosomal small subunit biogenesis (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); small-subunit processome (ortholog) 3 37562678 37573841 - 30032202 116896299 MODEL JAAIVD010000012;XM_032897386 XP_032753277 deoxynucleotidyltransferase terminal-interacting protein 2 protein-coding 625858545 LOC116913817 olfactory receptor 10G2-like 12 71501735 71502683 + 116913817 MODEL JAAIVD010000007 pseudo 625858546 Hspa14 heat shock protein family A (Hsp70) member 14 ASSOCIATED WITH mouth disease (ortholog); FOUND IN cytosol (ortholog); ribosome (ortholog) 14 9935360 9956169 - 22301074;30032202 116883413 MODEL JAAIVD010000009;XM_032884540;XM_032884541 XP_032740431;XP_032740432 heat shock 70 kDa protein 14 protein-coding 625858566 Lama4 laminin subunit alpha 4 INVOLVED IN blood vessel development (ortholog); brown fat cell differentiation (ortholog); negative regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); Brugada syndrome (ortholog); Brugada syndrome 9 (ortholog); FOUND IN basement membrane (ortholog); neuromuscular junction (ortholog); synaptic cleft (ortholog) 18 38783750 38925963 + 22301074 116887175 MODEL JAAIVD010000013;XM_032888727 XP_032744618 laminin subunit alpha-4 protein-coding 625858608 Oprl1 opioid related nociceptin receptor 1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); nociceptin receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); behavioral response to cocaine (ortholog); behavioral response to ethanol (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); Anorexia (ortholog); FOUND IN plasma membrane (ortholog); synaptic membrane (ortholog) 5 158816461 158822804 + 22301074;30032202 116902455 MODEL JAAIVD010000023;XM_032905019;XM_032905020;XM_032905021;XM_032905022;XM_032905023 XP_032760910;XP_032760911;XP_032760912;XP_032760913;XP_032760914 nociceptin receptor protein-coding 625858631 LOC116891277 heat shock cognate 71 kDa protein-like 2 49239514 49241461 - 116891277 MODEL JAAIVD010000001 pseudo 625858632 Tspyl2 TSPY like 2 INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of DNA replication (ortholog); regulation of protein kinase activity (ortholog); ASSOCIATED WITH Endometrial Neoplasms (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) X 13483119 13488978 - 22301074;30032202 116888345 MODEL JAAIVD010000014;XM_032889616 XP_032745507 testis-specific Y-encoded-like protein 2 protein-coding 625858643 LOC116887091 sorting nexin-3 18 42173536 42206390 + 30032202 116887091 MODEL JAAIVD010000013;XM_032888602 XP_032744493 protein-coding 625858651 Tmprss11b transmembrane serine protease 11B ENCODES a protein that exhibits serine-type peptidase activity (ortholog); FOUND IN plasma membrane (ortholog) 11 279966 293486 + 22301074 116911928 MODEL JAAIVD010000006;XM_032915819 XP_032771710 transmembrane protease serine 11B protein-coding 625858663 LOC116888105 SIN3-HDAC complex-associated factor-like X 99143336 99252991 + 116888105 MODEL JAAIVD010000014 pseudo 625858664 Pfkl phosphofructokinase, liver type ENCODES a protein that exhibits 6-phosphofructokinase activity (ortholog); ATP binding (ortholog); fructose binding (ortholog); INVOLVED IN fructose 1,6-bisphosphate metabolic process (ortholog); fructose 6-phosphate metabolic process (ortholog); glycolytic process (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructosuria pathway; glycolysis pathway; ASSOCIATED WITH hemolytic anemia (ortholog); FOUND IN 6-phosphofructokinase complex (ortholog); cytosol (ortholog) 18 1278332 1300763 - 22301074;30032202 116887137 MODEL JAAIVD010000013;XM_032888686 XP_032744577 ATP-dependent 6-phosphofructokinase, liver type protein-coding 625858690 LOC116898937 interferon-induced GTP-binding protein Mx2-like 4 47011656 47032921 - 22301074;30032202 116898937 MODEL JAAIVD010000003;XM_032900352 XP_032756243 protein-coding 625858707 Rbmx RNA binding motif protein X-linked ENCODES a protein that exhibits chromatin binding (ortholog); identical protein binding (ortholog); mRNA binding (ortholog); INVOLVED IN cellular response to interleukin-1 (ortholog); membrane protein ectodomain proteolysis (ortholog); mRNA splice site recognition (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH genetic disease (ortholog); Spinal Cord Injuries (ortholog); syndromic X-linked intellectual disability Shashi type (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); euchromatin (ortholog); extracellular exosome (ortholog) X 117822539 117829168 - 22301074;30032202 116888834 MODEL JAAIVD010000014;XM_032890108 XP_032745999 RNA-binding motif protein, X chromosome protein-coding 625858720 Scgb2a2 secretoglobin family 2A member 2 2 151543232 151545970 + 30032202 116892082 MODEL JAAIVD010000001;XM_032893556 XP_032749447 mammaglobin-A protein-coding 625858727 LOC116906306 U6 spliceosomal RNA 7 86705851 86705957 + 116906306 MODEL JAAIVD010000026;XR_004388594 snrna 625858730 Ypel4 yippee like 4 INVOLVED IN negative regulation of erythrocyte clearance (ortholog); negative regulation of erythrocyte differentiation (ortholog); protein localization to plasma membrane (ortholog); ASSOCIATED WITH COVID-19 (ortholog) 5 62113712 62118252 + 116901587 MODEL JAAIVD010000023;XM_032903603 XP_032759494 protein yippee-like 4 protein-coding 625858739 LOC116912079 glyceraldehyde-3-phosphate dehydrogenase-like 1 167715468 167727129 - 116912079 MODEL JAAIVD010000025 pseudo 625858740 Haspin histone H3 associated protein kinase ENCODES a protein that exhibits ATP binding (ortholog); DNA binding (ortholog); histone H3T3 kinase activity (ortholog); INVOLVED IN chromosome organization involved in meiotic cell cycle (ortholog); gene expression (ortholog); homologous chromosome segregation (ortholog); FOUND IN centrosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 9 42374467 42377262 + 22301074;30032202 116909762 MODEL JAAIVD010000002;XM_032913448 XP_032769339 serine/threonine-protein kinase haspin protein-coding 625858745 LOC116910693 small nucleolar RNA SNORA55 9 89142077 89142194 + 116910693 MODEL JAAIVD010000002;XR_004389222 snorna 625858748 LOC116887836 60S ribosomal protein L18-like X 37678311 37680023 + 116887836 MODEL JAAIVD010000014 pseudo 625858749 Slc7a1 solute carrier family 7 member 1 ENCODES a protein that exhibits amino acid transmembrane transporter activity (ortholog); basic amino acid transmembrane transporter activity (ortholog); L-arginine transmembrane transporter activity (ortholog); INVOLVED IN amino acid import across plasma membrane (ortholog); L-amino acid transport (ortholog); L-arginine import across plasma membrane (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Prostatic Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) 16 5491669 5523242 + 22301074;30032202 116885276 MODEL JAAIVD010000004;XM_032886507 XP_032742398 high affinity cationic amino acid transporter 1 protein-coding 625858765 LOC116903832 protein tyrosine phosphatase type IVA 1 6 91552621 91554284 - 22301074;30032202 116903832 MODEL JAAIVD010000024;XM_032906544 XP_032762435 protein-coding 625858770 Galr2 galanin receptor 2 ENCODES a protein that exhibits galanin receptor activity (ortholog); neuropeptide binding (ortholog); peptide hormone binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); galanin-activated signaling pathway (ortholog); ASSOCIATED WITH depressive disorder (ortholog); major depressive disorder (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); cilium (ortholog) 9 67786885 67789747 - 22301074;30032202 116908695 MODEL JAAIVD010000002;XM_032912014 XP_032767905 galanin receptor type 2 protein-coding 625858776 LOC116897768 olfactory receptor Olfr180-like 4 1945366 1946292 + 22301074;30032202 116897768 MODEL JAAIVD010000003;XM_032899198 XP_032755089 protein-coding 625858779 Arhgap42 Rho GTPase activating protein 42 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN activation of GTPase activity (ortholog); negative regulation of Rho protein signal transduction (ortholog); negative regulation of systemic arterial blood pressure (ortholog) 8 4780434 5005059 + 22301074;30032202 116906593 MODEL JAAIVD010000027;XM_032909333 XP_032765224 rho GTPase-activating protein 42 protein-coding 625858807 Pdcd4 programmed cell death 4 INVOLVED IN BMP signaling pathway (ortholog); cellular response to lipopolysaccharide (ortholog); epithelial to mesenchymal transition involved in cardiac fibroblast development (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Arterial Injury (ortholog); Lung Neoplasms (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 2 53344434 53367464 + 30032202 116891288 MODEL JAAIVD010000001;XM_032892192;XM_032892193;XR_004386826 XP_032748083;XP_032748084 programmed cell death protein 4 protein-coding 625858829 Scn4b sodium voltage-gated channel beta subunit 4 ENCODES a protein that exhibits sodium channel regulator activity (ortholog); transmembrane transporter binding (ortholog); voltage-gated sodium channel activity (ortholog); INVOLVED IN AV node cell action potential (ortholog); cardiac muscle cell action potential involved in contraction (ortholog); cardiac muscle contraction (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); Familial Atrial Fibrillation 17 (ortholog); long QT syndrome (ortholog); FOUND IN intercalated disc (ortholog); plasma membrane (ortholog); voltage-gated sodium channel complex (ortholog) 8 39672844 39685184 + 30032202 116907560 MODEL JAAIVD010000027;XM_032910583 XP_032766474 sodium channel subunit beta-4 protein-coding 625858838 Pgbd1 piggyBac transposable element derived 1 ENCODES a protein that exhibits DNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN neurogenesis (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN nucleus (ortholog) 14 41020551 41047491 + 30032202 116883204 MODEL JAAIVD010000009;XM_032884231 XP_032740122 piggyBac transposable element-derived protein 1 protein-coding 625858848 LOC116909551 olfactory receptor 10-like 9 32067408 32068354 + 22301074 116909551 MODEL JAAIVD010000002;XM_032913167 XP_032769058 protein-coding 625858852 LOC116887658 cadherin-23-like 18 26130611 26144282 - 22301074 116887658 MODEL JAAIVD010000013;XM_032889258 XP_032745149 protein-coding 625858869 LOC116883391 aldo-keto reductase family 1 member C3 homolog 14 18590303 18607431 - 30032202 116883391 MODEL JAAIVD010000009;XM_032884511;XM_032884512;XM_032884514 XP_032740402;XP_032740403;XP_032740405 protein-coding 625858885 LOC116903871 zinc finger protein 212-like 6 92954959 92967158 - 22301074 116903871 MODEL JAAIVD010000024;XM_032906623;XM_032906624 XP_032762514;XP_032762515 protein-coding 625858896 Myom2 myomesin 2 ENCODES a protein that exhibits kinase binding (ortholog); INVOLVED IN extraocular skeletal muscle development (ortholog); sarcomere organization (ortholog); ASSOCIATED WITH Contracture (ortholog); FOUND IN M band (ortholog) 13 68695237 68764803 - 22301074 116914825 MODEL JAAIVD010000008;XM_032919280 XP_032775171 myomesin-2 protein-coding 625858937 Serinc2 serine incorporator 2 ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); phospholipid scramblase activity (ortholog); INVOLVED IN phosphatidylserine metabolic process (ortholog); plasma membrane phospholipid scrambling (ortholog); FOUND IN plasma membrane (ortholog) 1 27884165 27906064 + 22301074;30032202 116895967 MODEL JAAIVD010000025;XM_032897013 XP_032752904 protein-coding 625858951 Hs6st3 heparan sulfate 6-O-sulfotransferase 3 ENCODES a protein that exhibits heparan sulfate 6-sulfotransferase activity (ortholog); INVOLVED IN heparan sulfate proteoglycan biosynthetic process (ortholog); FOUND IN Golgi apparatus (ortholog) 12 6353571 6735515 - 22301074;30032202 116913672 MODEL JAAIVD010000007;XM_032917959 XP_032773850 heparan-sulfate 6-O-sulfotransferase 3 protein-coding 625858957 Ecm2 extracellular matrix protein 2 ENCODES a protein that exhibits collagen binding (ortholog); collagen V binding (ortholog); heparin binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); positive regulation of cell-substrate adhesion (ortholog); ASSOCIATED WITH Spontaneous Abortions (ortholog); FOUND IN extracellular matrix (ortholog); interstitial matrix (ortholog) 14 68478758 68512615 + 22301074;30032202 116915220 MODEL JAAIVD010000009;XM_032919608 XP_032775499 protein-coding 625858971 LOC116902693 olfactory receptor 9A4-like 6 41396375 41397319 + 22301074 116902693 MODEL JAAIVD010000024;XM_032905048 XP_032760939 protein-coding 625858974 LOC116900483 olfactory receptor 4C3-like 5 71630934 71631860 - 22301074 116900483 MODEL JAAIVD010000023;XM_032902218 XP_032758109 protein-coding 625858977 Hoxa13 homeobox A13 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN anatomical structure morphogenesis (ortholog); animal organ morphogenesis (ortholog); artery morphogenesis (ortholog); ASSOCIATED WITH Anorectal Malformations (ortholog); Congenital Hand Deformities (ortholog); Female Urogenital Diseases (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 6 88801731 88804856 + 22301074;30032202 116903797 MODEL JAAIVD010000024;XM_032906489 XP_032762380 homeobox protein Hox-A13 protein-coding 625858983 LOC116887322 glutathione S-transferase theta-2 18 11608876 11612203 + 30032202 116887322 MODEL JAAIVD010000013;XM_032888916 XP_032744807 protein-coding 625858992 LOC116906736 low molecular weight phosphotyrosine protein phosphatase 8 61145982 61147369 + 22301074 116906736 MODEL JAAIVD010000027;XM_032909558 XP_032765449 protein-coding 625858997 LOC116883502 olfactory receptor 2W3-like 14 41196526 41203742 - 22301074 116883502 MODEL JAAIVD010000009;XM_032884670;XM_032884671 XP_032740561;XP_032740562 protein-coding 625859004 Snx21 sorting nexin family member 21 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); FOUND IN early endosome membrane (ortholog) 5 153163817 153172084 - 22301074;30032202 116902352 MODEL JAAIVD010000023;XM_032904836;XM_032904837 XP_032760727;XP_032760728 sorting nexin-21 protein-coding 625859014 LOC116900548 olfactory receptor 4F17-like 5 89780432 89781370 + 22301074 116900548 MODEL JAAIVD010000023;XM_032902274 XP_032758165 protein-coding 625859017 Cep76 centrosomal protein 76 INVOLVED IN regulation of centriole replication (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); protein-containing complex (ortholog) 15 63636905 63664584 + 116884793 MODEL JAAIVD010000010;XM_032886028 XP_032741919 centrosomal protein of 76 kDa protein-coding 625859033 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92610087 92610158 + 116904850 MODEL JAAIVD010000024 trna 625859034 LOC116896095 glutathione S-transferase kappa 1-like 3 222229042 222236670 - 116896095 MODEL JAAIVD010000012 pseudo 625859035 Mrpl28 mitochondrial ribosomal protein L28 ASSOCIATED WITH Moebius syndrome (ortholog); FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrial ribosome (ortholog); mitochondrion (ortholog) 9 3387889 3390802 + 22301074;30032202 116908802 MODEL JAAIVD010000002;XM_032912204 XP_032768095 39S ribosomal protein L28, mitochondrial protein-coding 625859044 Gpr3 G protein-coupled receptor 3 INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway coupled to cGMP nucleotide second messenger (ortholog); negative regulation of cell cycle (ortholog); FOUND IN cytoplasm (ortholog); nuclear membrane (ortholog); plasma membrane (ortholog) 1 25038865 25042417 + 22301074 116895273 MODEL JAAIVD010000025;XM_032896593 XP_032752484 G-protein coupled receptor 3 protein-coding 625859050 Pus7l pseudouridine synthase 7 like ENCODES a protein that exhibits pseudouridine synthase activity (ortholog); INVOLVED IN mRNA pseudouridine synthesis (ortholog) 1 267406471 267425761 - 22301074;30032202 116884316 MODEL JAAIVD010000025;XM_032885429 XP_032741320 pseudouridylate synthase 7 homolog-like protein protein-coding 625859062 LOC116888071 splicing factor, proline- and glutamine-rich-like X 89166145 89169397 + 116888071 MODEL JAAIVD010000014 pseudo 625859063 LOC116911523 uncharacterized LOC116911523 10 51302391 51305715 - 116911523 MODEL JAAIVD010000005;XR_004389328 ncrna 625859067 Erc1 ELKS/RAB6-interacting/CAST family member 1 ENCODES a protein that exhibits PDZ domain binding (ortholog); small GTPase binding (ortholog); structural constituent of presynaptic active zone (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); regulation of calcium-dependent activation of synaptic vesicle fusion (ortholog); regulation of DNA-templated transcription (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH Macrocephaly, Dysmorphic Facies, and Psychomotor Retardation (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) 6 26887633 27174363 + 30032202 116903339 MODEL JAAIVD010000024;XM_032905787;XM_032905788;XM_032905789;XM_032905790;XM_032905791;XM_032905792;XM_032905793;XM_032905794 XP_032761678;XP_032761679;XP_032761680;XP_032761681;XP_032761682;XP_032761683;XP_032761684;XP_032761685 protein-coding 625859103 LOC116912854 uncharacterized LOC116912854 11 72282889 72325230 - 116912854 MODEL JAAIVD010000006;XR_004389484 ncrna 625859108 LOC116895580 chromobox protein homolog 3-like 3 139256036 139256584 + 116895580 MODEL JAAIVD010000012 pseudo 625859109 LOC116899803 U7 small nuclear RNA 4 108891849 108891910 - 116899803 MODEL JAAIVD010000003;XR_004387805 snrna 625859112 Rps23 ribosomal protein S23 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); maintenance of translational fidelity (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH brachycephaly, trichomegaly, and developmental delay (ortholog); FOUND IN cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) 3 205306966 205308580 - 22301074;30032202 116897307 MODEL JAAIVD010000012;XM_032899056 XP_032754947 40S ribosomal protein S23 protein-coding 625859120 LOC116888248 high mobility group protein B4-like X 108239662 108240207 + 116888248 MODEL JAAIVD010000014 pseudo 625859121 LOC116914069 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating-like 12 90125450 90126615 + 116914069 MODEL JAAIVD010000007 pseudo 625859122 C5ar1 complement C5a receptor 1 ENCODES a protein that exhibits complement component C5a binding (ortholog); complement component C5a receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); amyloid-beta clearance (ortholog); animal organ regeneration (ortholog); ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); adult respiratory distress syndrome (ortholog); Alzheimer's disease (ortholog); FOUND IN apical part of cell (ortholog); basolateral plasma membrane (ortholog); cell surface (ortholog) 2 172803089 172813257 + 22301074;30032202 116894500 MODEL JAAIVD010000001;XM_032896207 XP_032752098 C5a anaphylatoxin chemotactic receptor 1 protein-coding 625859128 Ercc6l2 ERCC excision repair 6 like 2 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN cellular response to reactive oxygen species (ortholog); DNA damage response (ortholog); double-strand break repair via classical nonhomologous end joining (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); bone marrow disease (ortholog); Bone Marrow Failure Syndrome 2 (ortholog); FOUND IN centrosome (ortholog); chromosome, centromeric region (ortholog); cytoplasm (ortholog) 14 75649339 75743684 - 22301074 116884037 MODEL JAAIVD010000009;XM_032885275;XM_032885276 XP_032741166;XP_032741167 DNA excision repair protein ERCC-6-like 2 protein-coding 625859155 LOC116912293 uncharacterized LOC116912293 11 12626934 12699369 + 116912293 MODEL JAAIVD010000006;XR_004389440 ncrna 625859159 LOC116894762 60S ribosomal protein L19-like 2 187593644 187594242 - 116894762 MODEL JAAIVD010000001 pseudo 625859160 Plxnb1 plexin B1 ENCODES a protein that exhibits GTPase activating protein binding (ortholog); semaphorin receptor activity (ortholog); INVOLVED IN inhibitory synapse assembly (ortholog); negative regulation of cell adhesion (ortholog); negative regulation of osteoblast proliferation (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN glutamatergic synapse (ortholog); plasma membrane (ortholog); postsynaptic membrane (ortholog) 8 100368722 100388642 + 22301074;30032202 116907640 MODEL JAAIVD010000027;XM_032910704 XP_032766595 plexin-B1 protein-coding 625859200 Kcnmb4 potassium calcium-activated channel subfamily M regulatory beta subunit 4 ENCODES a protein that exhibits calcium-activated potassium channel activity (ortholog); voltage-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); INVOLVED IN action potential (ortholog); detection of calcium ion (ortholog); neuronal action potential (ortholog); FOUND IN plasma membrane (ortholog); voltage-gated potassium channel complex (ortholog) 1 194570739 194625964 - 22301074;30032202 116909143 MODEL JAAIVD010000025;XM_032912632 XP_032768523 calcium-activated potassium channel subunit beta-4 protein-coding 625859207 LOC116891587 uncharacterized LOC116891587 2 81555576 81557846 - 116891587 MODEL JAAIVD010000001;XR_004386848 ncrna 625859212 LOC116894158 olfactory receptor 2AG1-like 2 104966675 104967622 + 22301074 116894158 MODEL JAAIVD010000001;XM_032895876 XP_032751767 protein-coding 625859215 LOC116894281 ribosome biogenesis protein BRX1 homolog 2 124747044 124748169 + 116894281 MODEL JAAIVD010000001 pseudo 625859216 Atp6v0e1 ATPase H+ transporting V0 subunit e1 ENCODES a protein that exhibits proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN proton transmembrane transport (ortholog); response to amino acid (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog) 9 4750734 4773340 - 22301074;30032202 116909896 MODEL JAAIVD010000002;XM_032913647 XP_032769538 V-type proton ATPase subunit e 1 protein-coding 625859224 LOC116894706 L-lactate dehydrogenase A chain-like 2 225028950 225029981 + 116894706 MODEL JAAIVD010000001 pseudo 625859225 LOC116890282 uncharacterized LOC116890282 1 21949641 21950713 + 116890282 MODEL JAAIVD010000025;XM_032890995 XP_032746886 uncharacterized protein LOC116890282 protein-coding 625859231 Krt23 keratin 23 9 54305266 54321717 - 22301074;30032202 116909272 MODEL JAAIVD010000002;XM_032912800 XP_032768691 keratin, type I cytoskeletal 23 protein-coding 625859243 Mocs3 molybdenum cofactor synthesis 3 ENCODES a protein that exhibits molybdopterin-synthase sulfurtransferase activity (ortholog); nucleotidyltransferase activity (ortholog); sulfurtransferase activity (ortholog); INVOLVED IN Mo-molybdopterin cofactor biosynthetic process (ortholog); tRNA thio-modification (ortholog); tRNA wobble uridine modification (ortholog); PARTICIPATES IN molybdenum cofactor biosynthetic pathway; ASSOCIATED WITH Hydrops Fetalis (ortholog); Molybdenum cofactor deficiency, type B2 (ortholog); FOUND IN cytosol (ortholog) 5 149777274 149779704 - 22301074;30032202 116902301 MODEL JAAIVD010000023;XM_032904745 XP_032760636 adenylyltransferase and sulfurtransferase MOCS3 protein-coding 625859248 LOC116885277 uncharacterized LOC116885277 16 5523672 5526287 + 116885277 MODEL JAAIVD010000004;XR_004386000 ncrna 625859252 LOC116893330 kallikrein-15-like 2 155377051 155385415 - 116893330 MODEL JAAIVD010000001 pseudo 625859253 LOC116908069 60S ribosomal protein L7a-like 8 64964843 64965936 - 116908069 MODEL JAAIVD010000027 pseudo 625859254 Map2k1 mitogen-activated protein kinase kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); MAP kinase kinase activity (ortholog); MAP kinase scaffold activity (ortholog); INVOLVED IN Bergmann glial cell differentiation (ortholog); cell motility (ortholog); cellular senescence (ortholog); PARTICIPATES IN altered extracellular signal-regulated Raf/Mek/Erk signaling pathway; ceramide signaling pathway; endothelin signaling pathway; ASSOCIATED WITH arteriovenous malformation (ortholog); autism spectrum disorder (ortholog); brain ischemia (ortholog); FOUND IN axon (ortholog); cell cortex (ortholog); ciliary basal body (ortholog) 8 58490586 58560952 - 22301074 116906565 MODEL JAAIVD010000027;XM_032909280;XM_032909282 XP_032765171;XP_032765173 dual specificity mitogen-activated protein kinase kinase 1 protein-coding 625859274 LOC116904776 small nucleolar RNA SNORA17 6 37748991 37749101 + 116904776 MODEL JAAIVD010000024 pseudo 625859275 LOC116900849 ADP/ATP translocase 2-like 5 61561844 61562763 + 116900849 MODEL JAAIVD010000023 pseudo 625859276 LOC116897504 small nucleolar RNA SNORA25 3 190492994 190493122 - 116897504 MODEL JAAIVD010000012;XR_004387524 snorna 625859279 Cracd capping protein inhibiting regulator of actin dynamics INVOLVED IN epithelial structure maintenance (ortholog); maintenance of gastrointestinal epithelium (ortholog); negative regulation of barbed-end actin filament capping (ortholog) 11 33595740 33624139 + 30032202 116911961 MODEL JAAIVD010000006;XM_032915881;XM_032915882;XM_032915884;XM_032915885;XM_032915886 XP_032771772;XP_032771773;XP_032771775;XP_032771776;XP_032771777 cancer-related regulator of actin dynamics protein-coding 625859303 LOC116889170 alpha-enolase-like X 94648004 94649658 + 22301074;30032202 116889170 MODEL JAAIVD010000014;XM_032890337;XM_032890338 XP_032746228;XP_032746229 protein-coding 625859311 Mapre2 microtubule associated protein RP/EB family member 2 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule binding (ortholog); microtubule plus-end binding (ortholog); INVOLVED IN positive regulation of ARF protein signal transduction (ortholog); positive regulation of focal adhesion disassembly (ortholog); positive regulation of keratinocyte migration (ortholog); ASSOCIATED WITH congenital symmetric circumferential skin creases 2 (ortholog); Developmental Disease (ortholog); genetic disease (ortholog); FOUND IN focal adhesion (ortholog); microtubule cytoskeleton (ortholog) 15 19934061 20076091 - 30032202 116884828 MODEL JAAIVD010000010;XM_032886066;XM_032886067;XM_032886068 XP_032741957;XP_032741958;XP_032741959 microtubule-associated protein RP/EB family member 2 protein-coding 625859329 LOC116893303 ubiquitin domain-containing protein 2-like 2 151387234 151388242 - 116893303 MODEL JAAIVD010000001 pseudo 625859330 LOC116901914 uncharacterized LOC116901914 5 104304350 104309654 - 116901914 MODEL JAAIVD010000023;XR_004388030 ncrna 625859336 Arhgap15 Rho GTPase activating protein 15 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN regulation of cell shape (ortholog); FOUND IN plasma membrane (ortholog) 5 21444223 22062143 + 22301074;30032202 116901383 MODEL JAAIVD010000023;XM_032903250 XP_032759141 rho GTPase-activating protein 15 protein-coding 625859354 LOC116888749 uncharacterized LOC116888749 X 18955809 18965870 - 116888749 MODEL JAAIVD010000014;XR_004386339 ncrna 625859359 Klhdc7b kelch domain containing 7B 1 258684251 258688054 + 22301074 116890174 MODEL JAAIVD010000025;XM_032890908 XP_032746799 kelch domain-containing protein 7B protein-coding 625859362 Wdr49 WD repeat domain 49 ASSOCIATED WITH prostate cancer (ortholog) 3 78410306 78592480 + 22301074 116895833 MODEL JAAIVD010000012;XM_032896953 XP_032752844 WD repeat-containing protein 49 protein-coding 625859382 Cfd complement factor D ENCODES a protein that exhibits endopeptidase activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN complement activation, alternative pathway (ortholog); Notch signaling pathway (ortholog); response to bacterium (ortholog); ASSOCIATED WITH Arterial Occlusive Diseases (ortholog); arthus reaction (ortholog); asbestosis (ortholog); FOUND IN extracellular region (ortholog) 1 154980418 154982310 - 22301074 116889865 MODEL JAAIVD010000025;XM_032890690 XP_032746581 protein-coding 625859391 LOC116900444 olfactory receptor 4C15-like 5 70881395 70882333 - 22301074 116900444 MODEL JAAIVD010000023;XM_032902184 XP_032758075 protein-coding 625859395 Nabp1 nucleic acid binding protein 1 ENCODES a protein that exhibits RNA binding (ortholog); single-stranded DNA binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH multiple sclerosis (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 4 123962621 123970047 + 30032202 116899377 MODEL JAAIVD010000003;XM_032901092;XM_032901093;XM_032901094 XP_032756983;XP_032756984;XP_032756985 SOSS complex subunit B2 protein-coding 625859411 LOC116884885 60S ribosomal protein L31-like 15 40905556 40906038 - 116884885 MODEL JAAIVD010000010 pseudo 625859412 LOC116900094 odorant-binding protein 2a-like 5 11489737 11493070 - 30032202 116900094 MODEL JAAIVD010000023;XM_032901872 XP_032757763 protein-coding 625859423 LOC116901060 cytochrome c oxidase assembly factor 6 homolog 5 142178017 142178253 + 116901060 MODEL JAAIVD010000023 pseudo 625859424 Dgkz diacylglycerol kinase zeta ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); enzyme inhibitor activity (ortholog); kinase activity (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); glycerolipid metabolic process (ortholog); lipid phosphorylation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog); Hypoxia (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); lamellipodium (ortholog) 5 66077198 66118831 - 22301074;30032202 116901634 MODEL JAAIVD010000023;XM_032903720;XM_032903721;XM_032903722;XM_032903723 XP_032759611;XP_032759612;XP_032759613;XP_032759614 protein-coding 625859468 Hars1 histidyl-tRNA synthetase 1 ENCODES a protein that exhibits ATP binding (ortholog); histidine-tRNA ligase activity (ortholog); identical protein binding (ortholog); INVOLVED IN histidyl-tRNA aminoacylation (ortholog); PARTICIPATES IN histidine metabolic pathway; histidinemia pathway; ASSOCIATED WITH autoimmune disease (ortholog); cerebellar ataxia (ortholog); Charcot-Marie-Tooth disease (ortholog); FOUND IN cytosol (ortholog) 15 7597631 7614029 + 22301074;30032202 116884286 MODEL JAAIVD010000010;XM_032885382 XP_032741273 histidine--tRNA ligase, cytoplasmic protein-coding 625859485 LOC116889328 60S ribosomal protein L7a-like 1 132232810 132233620 + 116889328 MODEL JAAIVD010000025 pseudo 625859486 Man1c1 mannosidase alpha class 1C member 1 1 23550737 23689709 + 22301074;30032202 116894672 MODEL JAAIVD010000025;XM_032896378 XP_032752269 mannosyl-oligosaccharide 1,2-alpha-mannosidase IC protein-coding 625859502 LOC116893980 40S ribosomal protein S2-like 2 101297580 101298446 - 116893980 MODEL JAAIVD010000001 pseudo 625859503 LOC116886608 zinc finger CCCH-type antiviral protein 1-like 17 12999729 13001381 + 116886608 MODEL JAAIVD010000011 pseudo 625859504 LOC116902355 eppin 5 153376904 153391422 + 22301074;30032202 116902355 MODEL JAAIVD010000023;XM_032904841;XM_032904842;XM_032904843 XP_032760732;XP_032760733;XP_032760734 WAP four-disulfide core domain protein 6A protein-coding 625859520 LOC116888338 claudin-34-like X 78268599 78269252 + 30032202 116888338 MODEL JAAIVD010000014;XM_032889608 XP_032745499 protein-coding 625859524 Tbc1d24 TBC1 domain family member 24 INVOLVED IN axon development (ortholog); cellular response to oxidative stress (ortholog); dendrite development (ortholog); ASSOCIATED WITH autosomal dominant nocturnal frontal lobe epilepsy (ortholog); autosomal dominant nonsyndromic deafness 65 (ortholog); autosomal recessive nonsyndromic deafness 86 (ortholog); FOUND IN cell junction (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) 9 1477395 1482669 - 116908693 MODEL JAAIVD010000002;XM_032912011;XM_032912012 XP_032767902;XP_032767903 protein-coding 625859538 LOC116913988 olfactory receptor 6S1 12 72242337 72243539 + 22301074;30032202 116913988 MODEL JAAIVD010000007;XM_032918263 XP_032774154 protein-coding 625859542 LOC116888281 rho GTPase-activating protein 6 X 27801833 27817112 - 30032202 116888281 MODEL JAAIVD010000014;XM_032889559;XM_032889560 XP_032745450;XP_032745451 protein-coding 625859556 Trnar-ucg transfer RNA arginine (anticodon UCG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42527713 42527785 - 116884193 MODEL JAAIVD010000009 trna 625859557 Tdrd7 tudor domain containing 7 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN germ cell development (ortholog); lens fiber cell differentiation (ortholog); lens morphogenesis in camera-type eye (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 36 (ortholog); genetic disease (ortholog); FOUND IN chromatoid body (ortholog); cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog) 1 474551 538658 - 30032202 116890712 MODEL JAAIVD010000025;XM_032891157;XM_032891166;XM_032891175;XM_032891182 XP_032747048;XP_032747057;XP_032747066;XP_032747073 tudor domain-containing protein 7 protein-coding 625859586 Islr2 immunoglobulin superfamily containing leucine rich repeat 2 INVOLVED IN positive regulation of axon extension (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); FOUND IN cell surface (ortholog) 8 52071626 52079704 - 22301074;30032202 116907206 MODEL JAAIVD010000027;XM_032910165;XM_032910166;XM_032910167;XM_032910168;XM_032910169;XM_032910170;XM_032910172;XM_032910173;XM_032910174;XM_032910175;XM_032910176 XP_032766056;XP_032766057;XP_032766058;XP_032766059;XP_032766060;XP_032766061;XP_032766063;XP_032766064;XP_032766065;XP_032766066;XP_032766067 immunoglobulin superfamily containing leucine-rich repeat protein 2 protein-coding 625859617 Slc35b4 solute carrier family 35 member B4 ENCODES a protein that exhibits UDP-N-acetylglucosamine transmembrane transporter activity (ortholog); UDP-xylose transmembrane transporter activity (ortholog); INVOLVED IN regulation of gluconeogenesis (ortholog); UDP-N-acetylglucosamine transmembrane transport (ortholog); UDP-xylose transmembrane transport (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) 6 105509053 105529538 + 22301074;30032202 116903982 MODEL JAAIVD010000024;XM_032906790 XP_032762681 UDP-xylose and UDP-N-acetylglucosamine transporter protein-coding 625859631 Trnal-aag transfer RNA leucine (anticodon AAG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 80879053 80879134 - 116895143 MODEL JAAIVD010000001 trna 625859632 LOC116891442 zinc finger protein 239-like 2 73699011 73700585 + 116891442 MODEL JAAIVD010000001;XM_032892506 XP_032748397 protein-coding 625859637 LOC116897574 small nucleolar RNA SNORA17 3 137081698 137081829 - 116897574 MODEL JAAIVD010000012;XR_004387583 snorna 625859640 LOC116914911 60S ribosomal protein L18-like 13 28488716 28489259 + 116914911 MODEL JAAIVD010000008 pseudo 625859641 LOC116889656 elongation factor Tu-like 22301074;30032202 116889656 MODEL JAAIVD010000045;XM_032890561 XP_032746452 protein-coding 625859642 Lrp6 LDL receptor related protein 6 ENCODES a protein that exhibits apolipoprotein binding (ortholog); coreceptor activity (ortholog); frizzled binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); axis elongation (ortholog); axis elongation involved in somitogenesis (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH anodontia (ortholog); autosomal dominant polycystic kidney disease (ortholog); coronary artery disease (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); cytoplasmic vesicle (ortholog) 6 14880437 15004551 + 22301074;30032202 116903175 MODEL JAAIVD010000024;XM_032905546 XP_032761437 low-density lipoprotein receptor-related protein 6 protein-coding 625859669 LOC116895416 ADP-sugar pyrophosphatase-like 3 62902309 62902952 + 116895416 MODEL JAAIVD010000012 pseudo 625859670 Mzb1 marginal zone B and B1 cell specific protein INVOLVED IN integrin activation (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of immunoglobulin production (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum chaperone complex (ortholog); endoplasmic reticulum lumen (ortholog) 15 8728946 8731042 + 30032202 116884745 MODEL JAAIVD010000010;XM_032885964 XP_032741855 marginal zone B- and B1-cell-specific protein protein-coding 625859678 Il27ra interleukin 27 receptor subunit alpha ENCODES a protein that exhibits interleukin-27 receptor activity (ortholog); INVOLVED IN defense response to Gram-positive bacterium (ortholog); negative regulation of cellular extravasation (ortholog); negative regulation of interleukin-17 production (ortholog); PARTICIPATES IN interleukin-27 signaling pathway; ASSOCIATED WITH asthma (ortholog); Immunodeficiency 134 (Epstein-Barr virus-specific) (ortholog); pneumoconiosis (ortholog); FOUND IN humanin receptor complex (ortholog); plasma membrane (ortholog) 17 16241637 16252615 + 30032202 116886510 MODEL JAAIVD010000011;XM_032888018 XP_032743909 interleukin-27 receptor subunit alpha protein-coding 625859695 Efs embryonal Fyn-associated substrate ENCODES a protein that exhibits protein domain specific binding (ortholog); SH3 domain binding (ortholog); ASSOCIATED WITH Crohn's disease (ortholog) 12 70064950 70075208 + 22301074;30032202 116913779 MODEL JAAIVD010000007;XM_032918085 XP_032773976 protein-coding 625859705 LOC116894592 vomeronasal type-1 receptor 2-like 2 181379214 181380149 + 22301074;30032202 116894592 MODEL JAAIVD010000001;XM_032896311 XP_032752202 protein-coding 625859708 Isoc1 isochorismatase domain containing 1 FOUND IN peroxisome (ortholog) 15 73143931 73164699 - 30032202 116884561 MODEL JAAIVD010000010;XM_032885702 XP_032741593 isochorismatase domain-containing protein 1 protein-coding 625859716 LOC116914739 zinc finger protein 239-like 13 11946318 11959090 + 30032202 116914739 MODEL JAAIVD010000008;XM_032919175;XM_032919176 XP_032775066;XP_032775067 zinc finger protein 627-like protein-coding 625859727 Pgm1 phosphoglucomutase 1 ENCODES a protein that exhibits magnesium ion binding (ortholog); phosphoglucomutase activity (ortholog); INVOLVED IN cellular response to magnetism (ortholog); galactose catabolic process via UDP-galactose, Leloir pathway (ortholog); glucose metabolic process (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; fructose-1,6-bisphosphatase deficiency pathway; galactokinase deficiency pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Colorectal Neoplasms (ortholog); congenital disorder of glycosylation (ortholog); FOUND IN cytosol (ortholog); Z disc (ortholog) 1 54571055 54630538 - 22301074;30032202 116899793 MODEL JAAIVD010000025;XM_032901777 XP_032757668 phosphoglucomutase-1 protein-coding 625859742 LOC116891871 olfactory receptor 14C36-like 2 114373282 114374368 - 22301074;30032202 116891871 MODEL JAAIVD010000001;XM_032893272 XP_032749163 protein-coding 625859746 LOC116909268 olfactory receptor 10-like 9 32110537 32111472 + 22301074 116909268 MODEL JAAIVD010000002;XM_032912796 XP_032768687 protein-coding 625859749 Bach1 BTB domain and CNC homolog 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN DNA repair (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Cardiotoxicity (ortholog); Fibrosis (ortholog); FOUND IN nucleus (ortholog) 4 56136911 56169873 - 22301074;30032202 116899027 MODEL JAAIVD010000003;XM_032900478 XP_032756369 transcription regulator protein BACH1 protein-coding 625859758 Chd4 chromodomain helicase DNA binding protein 4 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent chromatin remodeler activity (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); double-strand break repair via homologous recombination (ortholog); negative regulation of gene expression (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; ASSOCIATED WITH autistic disorder (ortholog); brain disease (ortholog); breast cancer (ortholog); FOUND IN centrosome (ortholog); cerebellar granule cell to Purkinje cell synapse (ortholog); chromosome, telomeric region (ortholog) 6 22767955 22801030 - 22301074;30032202 116903262 MODEL JAAIVD010000024;XM_032905654 XP_032761545 chromodomain-helicase-DNA-binding protein 4 protein-coding 625859802 Lsm14b LSM family member 14B ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN maternal mRNA clearance (ortholog); meiotic cell cycle process involved in oocyte maturation (ortholog); membraneless organelle assembly (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog) 5 157112186 157122929 + 30032202 116902398 MODEL JAAIVD010000023;XM_032904918;XM_032904919;XM_032904920;XM_032904921 XP_032760809;XP_032760810;XP_032760811;XP_032760812 protein LSM14 homolog B protein-coding 625859821 LOC116902840 amiloride-sensitive amine oxidase [copper-containing]-like 6 91985171 91990306 - 22301074;30032202 116902840 MODEL JAAIVD010000024;XM_032905169;XM_032905170 XP_032761060;XP_032761061 protein-coding 625859833 Srrd SRR1 domain containing INVOLVED IN regulation of circadian rhythm (ortholog); regulation of heme biosynthetic process (ortholog); FOUND IN cytoplasm (ortholog) 16 41631871 41637396 + 30032202 116885127 MODEL JAAIVD010000004;XM_032886282;XM_032886283 XP_032742173;XP_032742174 SRR1-like protein protein-coding 625859849 Trappc14 trafficking protein particle complex subunit 14 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); INVOLVED IN cilium assembly (ortholog); regulation of cell population proliferation (ortholog); ASSOCIATED WITH primary autosomal recessive microcephaly 25 (ortholog); FOUND IN centriolar satellite (ortholog); midbody (ortholog); mitotic spindle (ortholog) 16 16039715 16044065 + 22301074;30032202 116885729 MODEL JAAIVD010000004;XM_032887039 XP_032742930 Map11 microtubule associated protein 11;microtubule-associated protein 11;trafficking protein particle complex 14 protein-coding 625859864 LOC116889757 uncharacterized protein KIAA2012-like 116889757 MODEL JAAIVD010000081;XM_032890619 XP_032746510 protein-coding 625859865 LOC116902756 40S ribosomal protein S25-like 6 63259559 63259997 + 30032202 116902756 MODEL JAAIVD010000024;XM_032905102 XP_032760993 protein-coding 625859870 LOC116883882 prolactin-3C1 14 46594032 46599769 - 22301074;30032202 116883882 MODEL JAAIVD010000009;XM_032885148 XP_032741039 protein-coding 625859879 LOC116897780 PCNA-associated factor-like 4 7919043 7940099 + 116897780 MODEL JAAIVD010000003 pseudo 625859880 Agxt2 alanine--glyoxylate aminotransferase 2 ENCODES a protein that exhibits (R)-3-amino-2-methylpropionate:pyruvate transaminase activity (ortholog); beta-alanine:pyruvate transaminase activity (ortholog); L-alanine:glyoxylate transaminase activity (ortholog); INVOLVED IN glycine biosynthetic process (ortholog); glyoxylate catabolic process (ortholog); L-alanine catabolic process (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Beta-Aminoisobutyric Acid, Urinary Excretion of (ortholog); Carotid Atherosclerosis (ortholog); FOUND IN mitochondrion (ortholog) 3 170322094 170363885 - 22301074;30032202 116895619 MODEL JAAIVD010000012;XM_032896829;XM_032896830 XP_032752720;XP_032752721 alanine--glyoxylate aminotransferase 2, mitochondrial protein-coding 625859901 Rras2 RAS related 2 ENCODES a protein that exhibits GTPase activity (ortholog); INVOLVED IN positive regulation of cell migration (ortholog); Ras protein signal transduction (ortholog); ASSOCIATED WITH Experimental Liver Neoplasms (ortholog); genetic disease (ortholog); juvenile myelomonocytic leukemia (ortholog); FOUND IN plasma membrane (ortholog) 2 87399083 87466741 + 22301074;30032202 116891635 MODEL JAAIVD010000001;XM_032892850 XP_032748741 ras-related protein R-Ras2 protein-coding 625859911 LOC116890622 U1 spliceosomal RNA 1 53278525 53278678 - 116890622 MODEL JAAIVD010000025 pseudo 625859912 LOC116915121 small nucleolar RNA SNORA17 13 34641196 34641327 + 116915121 MODEL JAAIVD010000008;XR_004389802 snorna 625859915 Igsf23 immunoglobulin superfamily member 23 INVOLVED IN osteoclast differentiation (ortholog); FOUND IN plasma membrane (ortholog) 2 170670382 170683803 + 116892523 MODEL JAAIVD010000001;XM_032894278 XP_032750169 protein-coding 625859924 Fimp1 fertilization-influencing membrane protein 1 INVOLVED IN fertilization (ortholog); fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); ASSOCIATED WITH lymphopenia (ortholog); neutropenia (ortholog) 2 75064419 75065404 + 22301074;30032202 116891503 MODEL JAAIVD010000001;XM_032892635 XP_032748526 C2H16orf92 chromosome 2 C16orf92 homolog;uncharacterized protein C16orf92 homolog APPROVED protein-coding 625859931 LOC116903884 uncharacterized LOC116903884 6 95324229 95330169 - 116903884 MODEL JAAIVD010000024;XR_004388309 ncrna 625859936 LOC116895647 nucleolar protein 16-like 3 183038221 183038777 + 116895647 MODEL JAAIVD010000012 pseudo 625859937 Vav1 vav guanine nucleotide exchange factor 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); phosphorylation-dependent protein binding (ortholog); phosphotyrosine residue binding (ortholog); INVOLVED IN B cell proliferation (ortholog); G protein-coupled receptor signaling pathway (ortholog); immune response (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); autistic disorder (ortholog); endometriosis (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog) 4 88682952 88731710 + 22301074;30032202 116898420 MODEL JAAIVD010000003;XM_032899701 XP_032755592 proto-oncogene vav protein-coding 625859967 Rbm3 RNA binding motif protein 3 ENCODES a protein that exhibits ribosomal large subunit binding (ortholog); INVOLVED IN miRNA processing (ortholog); positive regulation of translation (ortholog); regulation of translation (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); large ribosomal subunit (ortholog) X 15545712 15549212 - 22301074;30032202 116888663 MODEL JAAIVD010000014;XM_032889954;XM_032889955;XM_032889956;XM_032889957 XP_032745845;XP_032745846;XP_032745847;XP_032745848 RNA-binding protein 3 protein-coding 625859986 Tsfm Ts translation elongation factor, mitochondrial INVOLVED IN mitochondrial translational elongation (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency (ortholog); combined oxidative phosphorylation deficiency 3 (ortholog); dilated cardiomyopathy (ortholog); FOUND IN mitochondrion (ortholog) 1 205452996 205460805 - 10397682;22301074;30032202 116909757 MODEL AJ005161;JAAIVD010000025;XM_032913446 CAB56708;XP_032769337 EF-Ts elongation factor;elongation factor Ts, mitochondrial protein-coding 625859996 Aunip aurora kinase A and ninein interacting protein ENCODES a protein that exhibits damaged DNA binding (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); negative regulation of double-strand break repair via nonhomologous end joining (ortholog); spindle organization (ortholog); FOUND IN centrosome (ortholog); site of DNA damage (ortholog); spindle pole (ortholog) 1 23729053 23742686 - 30032202 116894719 MODEL JAAIVD010000025;XM_032896416;XM_032896418 XP_032752307;XP_032752309 aurora kinase A and ninein-interacting protein protein-coding 625860006 Dhx36 DEAH-box helicase 36 ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); catalytic activity, acting on a nucleic acid (ortholog); DNA helicase activity (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); cellular response to arsenite ion (ortholog); cellular response to heat (ortholog); FOUND IN axon (ortholog); chromosome, telomeric region (ortholog); cytoplasm (ortholog) 3 92708340 92747104 + 22301074;30032202 116896830 MODEL JAAIVD010000012;XM_032898312 XP_032754203 ATP-dependent DNA/RNA helicase DHX36 protein-coding 625860035 LOC116911721 left-right determination factor 2 10 59207272 59211945 + 22301074;30032202 116911721 MODEL JAAIVD010000005;XM_032915694 XP_032771585 protein-coding 625860043 Ccdc85a coiled-coil domain containing 85A FOUND IN adherens junction (ortholog) 11 95923794 96148241 - 30032202 116912740 MODEL JAAIVD010000006;XM_032916880;XM_032916881;XM_032916882;XM_032916883;XM_032916885 XP_032772771;XP_032772772;XP_032772773;XP_032772774;XP_032772776 coiled-coil domain-containing protein 85A protein-coding 625860060 C1H19orf25 chromosome 1 C19orf25 homolog 1 154561015 154563183 + 116905214 MODEL JAAIVD010000025;XM_032908032 XP_032763923 UPF0449 protein C19orf25 homolog protein-coding 625860066 Fzd7 frizzled class receptor 7 ENCODES a protein that exhibits frizzled binding (ortholog); PDZ domain binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); mesenchymal to epithelial transition (ortholog); negative regulation of cardiac muscle cell differentiation (ortholog); PARTICIPATES IN syndecan signaling pathway; Wnt signaling pathway; Wnt signaling, non-canonical pathway; ASSOCIATED WITH nephroblastoma (ortholog); FOUND IN plasma membrane (ortholog); recycling endosome membrane (ortholog) 4 133017959 133022330 - 30032202 116899412 MODEL JAAIVD010000003;XM_032901148 XP_032757039 frizzled-7 protein-coding 625860071 LOC116883693 40S ribosomal protein S21-like 14 71602873 71603218 - 116883693 MODEL JAAIVD010000009 pseudo 625860072 Eif3j eukaryotic translation initiation factor 3 subunit J ENCODES a protein that exhibits identical protein binding (ortholog); PARTICIPATES IN translation initiation pathway; FOUND IN eukaryotic translation initiation factor 3 complex (ortholog) 5 100144516 100167234 + 22301074;30032202 116901880 MODEL JAAIVD010000023;XM_032904087 XP_032759978 protein-coding 625860084 Mllt1 MLLT1 super elongation complex subunit INVOLVED IN negative regulation of protein kinase activity (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH Hypertelorism (ortholog); nephroblastoma (ortholog); FOUND IN fibrillar center (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 4 88271708 88316610 - 22301074;30032202 116899201 MODEL JAAIVD010000003;XM_032900787;XM_032900788;XM_032900789 XP_032756678;XP_032756679;XP_032756680 protein ENL protein-coding 625860106 Znf334 zinc finger protein 334 5 152571678 152582109 + 22301074 116902334 MODEL JAAIVD010000023;XM_032904808 XP_032760699 protein-coding 625860114 Zbtb3 zinc finger and BTB domain containing 3 2 9142620 9144986 - 22301074;30032202 116890925 MODEL JAAIVD010000001;XM_032891564;XM_032891565 XP_032747455;XP_032747456 zinc finger and BTB domain-containing protein 3 protein-coding 625860125 LOC116908458 U6 spliceosomal RNA 8 99200222 99200328 - 116908458 MODEL JAAIVD010000027;XR_004388976 snrna 625860128 LOC116890430 U7 small nuclear RNA 1 199585923 199585984 + 116890430 MODEL JAAIVD010000025;XR_004386628 snrna 625860131 Lipa lipase A, lysosomal acid type ENCODES a protein that exhibits lipase activity (ortholog); sterol ester esterase activity (ortholog); INVOLVED IN acute inflammatory response (ortholog); adaptive thermogenesis (ortholog); adipose tissue development (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; ASSOCIATED WITH cholesterol ester storage disease (ortholog); coronary artery disease (ortholog); COVID-19 (ortholog); FOUND IN lysosome (ortholog) 2 34118133 34148930 - 30032202 116891104 MODEL JAAIVD010000001;XM_032891817 XP_032747708 lysosomal acid lipase/cholesteryl ester hydrolase protein-coding 625860144 LOC116902595 small nucleolar RNA SNORA17 5 40388146 40388277 - 116902595 MODEL JAAIVD010000023;XR_004388185 snorna 625860147 LOC116893615 tumor necrosis factor receptor superfamily member 26-like 2 6064874 6094507 + 22301074;30032202 116893615 MODEL JAAIVD010000001;XM_032895326;XM_032895327 XP_032751217;XP_032751218 protein-coding 625860163 LOC116900062 ATP synthase subunit g, mitochondrial-like 5 6848375 6848749 + 116900062 MODEL JAAIVD010000023 pseudo 625860164 Plcxd3 phosphatidylinositol specific phospholipase C X domain containing 3 FOUND IN glutamatergic synapse (ortholog); synapse (ortholog) 3 175643564 175811753 - 22301074;30032202 116897155 MODEL JAAIVD010000012;XM_032898825 XP_032754716 PI-PLC X domain-containing protein 3 protein-coding 625860171 Prr3 proline rich 3 18 9164651 9171775 - 22301074;30032202 116887481 MODEL JAAIVD010000013;XM_032889101;XM_032889102;XM_032889103;XM_032889104 XP_032744992;XP_032744993;XP_032744994;XP_032744995 proline-rich protein 3 protein-coding 625860187 Alkbh1 alkB homolog 1, histone H2A dioxygenase ENCODES a protein that exhibits 2-oxoglutarate-dependent tRNA 5-methylcytidine formyltransferase activity (ortholog); broad specificity oxidative DNA demethylase activity (ortholog); chemoattractant activity (ortholog); INVOLVED IN cell differentiation (ortholog); developmental growth (ortholog); DNA repair (ortholog); FOUND IN euchromatin (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 7 101522645 101541770 - 30032202 116905326 MODEL JAAIVD010000026;XM_032908219 XP_032764110 nucleic acid dioxygenase ALKBH1 protein-coding 625860197 LOC116912666 40S ribosomal protein SA-like 11 9872117 9872923 - 116912666 MODEL JAAIVD010000006 pseudo 625860198 LOC116893106 serine/arginine repetitive matrix protein 3-like 2 66319275 66386159 - 116893106 MODEL JAAIVD010000001;XM_032895045 XP_032750936 protein-coding 625860204 LOC116889036 uncharacterized LOC116889036 X 19789161 19789956 - 116889036 MODEL JAAIVD010000014;XM_032890233 XP_032746124 uncharacterized protein LOC116889036 protein-coding 625860207 Aqp1 aquaporin 1 (Colton blood group) ENCODES a protein that exhibits ammonium channel activity (ortholog); carbon dioxide transmembrane transporter activity (ortholog); ephrin receptor binding (ortholog); INVOLVED IN ammonium transmembrane transport (ortholog); camera-type eye morphogenesis (ortholog); carbon dioxide transmembrane transport (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Animal Mammary Neoplasms (ortholog); Aquaporin 1 Deficiency (ortholog); FOUND IN ankyrin-1 complex (ortholog); apical part of cell (ortholog); apical plasma membrane (ortholog) 6 85726131 85738471 - 22301074;30032202 116903755 MODEL JAAIVD010000024;XM_032906446 XP_032762337 aquaporin-1 protein-coding 625860215 Prickle4 prickle planar cell polarity protein 4 4 82181786 82188111 + 22301074 116899076 MODEL JAAIVD010000003;XM_032900567;XM_032900568;XM_032900569;XM_032900570;XM_032900571;XM_032900572 XP_032756458;XP_032756459;XP_032756460;XP_032756461;XP_032756462;XP_032756463 prickle-like protein 4 protein-coding 625860242 Rexo1 RNA exonuclease 1 homolog ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) 1 154325423 154344900 + 22301074;30032202 116905042 MODEL JAAIVD010000025;XM_032907726 XP_032763617 protein-coding 625860262 Dse dermatan sulfate epimerase ENCODES a protein that exhibits chondroitin-glucuronate 5-epimerase activity (ortholog); INVOLVED IN dermatan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH Ehlers-Danlos syndrome (ortholog); Ehlers-Danlos syndrome musculocontractural type 2 (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) 18 24187014 24258253 - 30032202 116886892 MODEL JAAIVD010000013;XM_032888349;XM_032888351;XM_032888352 XP_032744240;XP_032744242;XP_032744243 dermatan-sulfate epimerase protein-coding 625860278 L3mbtl4 L3MBTL histone methyl-lysine binding protein 4 ASSOCIATED WITH megacolon (ortholog) 4 178073835 178397200 + 22301074 116898594 MODEL JAAIVD010000003;XM_032899789 XP_032755680 lethal(3)malignant brain tumor-like protein 4 protein-coding 625860296 Fabp2 fatty acid binding protein 2 ENCODES a protein that exhibits fatty acid binding (ortholog); long-chain fatty acid binding (ortholog); long-chain fatty acid transmembrane transporter activity (ortholog); INVOLVED IN energy homeostasis (ortholog); fatty acid metabolic process (ortholog); fatty acid transport (ortholog); ASSOCIATED WITH alcoholic liver cirrhosis (ortholog); carotid stenosis (ortholog); coronary artery disease (ortholog); FOUND IN apical cortex (ortholog); microvillus (ortholog) 3 36912425 36916413 - 22301074;30032202 116896295 MODEL JAAIVD010000012;XM_032897378 XP_032753269 fatty acid-binding protein, intestinal protein-coding 625860304 Sdhd succinate dehydrogenase complex subunit D ENCODES a protein that exhibits heme binding (ortholog); protein-membrane adaptor activity (ortholog); succinate dehydrogenase (quinone) activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); regulation of catecholamine secretion (ortholog); tricarboxylic acid cycle (ortholog); PARTICIPATES IN altered citric acid cycle pathway; citric acid cycle pathway; electron transport chain pathway; ASSOCIATED WITH Carney-Stratakis syndrome (ortholog); combined oxidative phosphorylation deficiency 8 (ortholog); COVID-19 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 8 45067220 45076645 - 22301074;30032202 116906844 MODEL JAAIVD010000027;XM_032909739 XP_032765630 succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial protein-coding 625860312 LOC116901296 uncharacterized LOC116901296 5 11677391 11677744 + 116901296 MODEL JAAIVD010000023;XR_004387974 ncrna 625860316 LOC116889801 histone H2A-Bbd type 2/3-like 22301074;30032202 116889801 MODEL JAAIVD010000626;XM_032890650 XP_032746541 protein-coding 625860317 Gtf2e2 general transcription factor IIE subunit 2 ENCODES a protein that exhibits RNA polymerase II general transcription initiation factor activity (ortholog); INVOLVED IN RNA polymerase II preinitiation complex assembly (ortholog); transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH genetic disease (ortholog); nonphotosensitive trichothiodystrophy 6 (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 13 53236603 53284180 - 22301074;30032202 116914500 MODEL JAAIVD010000008;XM_032918813;XM_032918814 XP_032774704;XP_032774705 transcription initiation factor IIE subunit beta protein-coding 625860332 Il1r1 interleukin 1 receptor type 1 ENCODES a protein that exhibits interleukin-1 binding (ortholog); interleukin-1 receptor activity (ortholog); ionotropic glutamate receptor binding (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cytokine-mediated signaling pathway (ortholog); heat acclimation (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; interleukin-12 signaling pathway; ASSOCIATED WITH allergic disease (ortholog); aortic dissection (ortholog); Bacterial Keratitis (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); external side of plasma membrane (ortholog) 4 116514784 116555966 + 22301074;30032202 116899324 MODEL JAAIVD010000003;XM_032901011;XM_032901012;XM_032901013;XM_032901014;XM_032901015 XP_032756902;XP_032756903;XP_032756904;XP_032756905;XP_032756906 interleukin-1 receptor type 1 protein-coding 625860364 LOC116893526 nesprin-1-like 2 197580382 197716620 + 22301074 116893526 MODEL JAAIVD010000001;XM_032895251 XP_032751142 protein-coding 625860416 LOC116887946 interferon alpha-1-like 1 65163596 65164165 + 22301074;30032202 116887946 MODEL JAAIVD010000025;XM_032889401 XP_032745292 protein-coding 625860419 LOC116891902 uncharacterized LOC116891902 2 118727334 118730518 - 116891902 MODEL JAAIVD010000001;XR_004386868 ncrna 625860423 Mpv17 mitochondrial inner membrane protein MPV17 ENCODES a protein that exhibits channel activity (ortholog); INVOLVED IN glomerular basement membrane development (ortholog); inner ear development (ortholog); reactive oxygen species metabolic process (ortholog); ASSOCIATED WITH autosomal recessive Alport syndrome (ortholog); Charcot-Marie-Tooth disease type 2EE (ortholog); cochlear disease (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); peroxisome (ortholog) 7 22931697 22944762 + 22301074;30032202 116905982 MODEL JAAIVD010000026;XM_032908999;XM_032909000;XM_032909001;XM_032909002;XM_032909003;XM_032909004;XM_032909005;XM_032909006 XP_032764890;XP_032764891;XP_032764892;XP_032764893;XP_032764894;XP_032764895;XP_032764896;XP_032764897 protein Mpv17 protein-coding 625860454 LOC116893721 fatty acid-binding protein 5-like 2 13682409 13682796 + 116893721 MODEL JAAIVD010000001 pseudo 625860455 LOC116897444 U6 spliceosomal RNA 3 200424566 200424670 + 116897444 MODEL JAAIVD010000012;XR_004387479 snrna 625860458 LOC116893255 40S ribosomal protein S27-like 2 132555846 132557067 - 116893255 MODEL JAAIVD010000001 pseudo 625860459 LOC116891780 short transient receptor potential channel 2 2 100379622 100397295 + 22301074;30032202 116891780 MODEL JAAIVD010000001;XM_032893122 XP_032749013 protein-coding 625860476 Tceal8 transcription elongation factor A like 8 ASSOCIATED WITH autistic disorder (ortholog) X 88163795 88165957 - 116888903 MODEL JAAIVD010000014;XM_032890161 XP_032746052 transcription elongation factor A protein-like 8 protein-coding 625860483 LOC116890231 heterogeneous nuclear ribonucleoprotein A1-like 1 271072434 271073532 + 116890231 MODEL JAAIVD010000025 pseudo 625860484 LOC116895337 glyceraldehyde-3-phosphate dehydrogenase-like 3 38696574 38697386 + 116895337 MODEL JAAIVD010000012 pseudo 625860485 Klhl41 kelch like family member 41 INVOLVED IN myofibril assembly (ortholog); protein ubiquitination (ortholog); pseudopodium assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); hypertrophic cardiomyopathy (ortholog); nemaline myopathy (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog); cytoskeleton (ortholog) 5 46972821 46986015 + 22301074 116901483 MODEL JAAIVD010000023;XM_032903438 XP_032759329 kelch-like protein 41 protein-coding 625860495 LOC116895601 heterogeneous nuclear ribonucleoprotein M-like 3 154804479 154806873 + 116895601 MODEL JAAIVD010000012 pseudo 625860496 Trnak-cuu transfer RNA lysine (anticodon CUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 1 95772802 95772874 + 116890636 MODEL JAAIVD010000025 trna 625860497 LOC116898001 40S ribosomal protein S6-like 4 61785954 61786720 + 116898001 MODEL JAAIVD010000003 pseudo 625860498 LOC116885547 cytochrome c oxidase assembly protein COX19 ENCODES a protein that exhibits protein folding chaperone (ortholog); INVOLVED IN intracellular copper ion homeostasis (ortholog); mitochondrial respiratory chain complex IV assembly (ortholog); protein maturation (ortholog); FOUND IN cytosol (ortholog); mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) 16 13856152 13864402 + 30032202 116885547 MODEL JAAIVD010000004;XM_032886841 XP_032742732 protein-coding 625860505 Pigk phosphatidylinositol glycan anchor biosynthesis class K ENCODES a protein that exhibits GPI-anchor transamidase activity (ortholog); INVOLVED IN attachment of GPI anchor to protein (ortholog); GPI anchored protein biosynthesis (ortholog); ASSOCIATED WITH genetic disease (ortholog); Neurodevelopmental Disorder with Hypotonia and Cerebellar Atrophy, with or without Seizures (ortholog); FOUND IN GPI-anchor transamidase complex (ortholog) 3 8843082 8925553 - 22301074;30032202 116896148 MODEL JAAIVD010000012;XM_032897133 XP_032753024 GPI-anchor transamidase protein-coding 625860520 LOC116883167 serine/arginine-rich splicing factor 3-like 14 19877965 19878376 - 116883167 MODEL JAAIVD010000009 pseudo 625860521 LOC116893099 scavenger receptor cysteine-rich domain-containing protein SCART1-like 2 61540099 61564805 + 22301074 116893099 MODEL JAAIVD010000001;XM_032895040 XP_032750931 protein-coding 625860535 LOC116908232 olfactory receptor 10G6 8 82828666 82829622 + 22301074 116908232 MODEL JAAIVD010000027;XM_032911495 XP_032767386 protein-coding 625860539 Exoc6 exocyst complex component 6 INVOLVED IN erythrocyte differentiation (ortholog); PARTICIPATES IN insulin signaling pathway 2 36077804 36222944 - 22301074;30032202 116891128 MODEL JAAIVD010000001;XM_032891851 XP_032747742 protein-coding 625860565 Mvk mevalonate kinase ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN cholesterol biosynthetic process (ortholog); cholesterol biosynthetic process via desmosterol (ortholog); cholesterol biosynthetic process via lathosterol (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH Arthralgia (ortholog); Chediak-Higashi syndrome (ortholog); exanthem (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); peroxisome (ortholog) 16 39492331 39510297 - 22301074;30032202 116885550 MODEL JAAIVD010000004;XM_032886843 XP_032742734 protein-coding 625860580 Wdr13 WD repeat domain 13 ENCODES a protein that exhibits promoter-specific chromatin binding (ortholog); INVOLVED IN negative regulation of type B pancreatic cell proliferation (ortholog); ASSOCIATED WITH esophageal atresia (ortholog); FOUND IN nucleoplasm (ortholog) X 15524002 15535197 - 22301074;30032202 116888466 MODEL JAAIVD010000014;XM_032889746;XM_032889747 XP_032745637;XP_032745638 WD repeat-containing protein 13 protein-coding 625860597 Tmem54 transmembrane protein 54 1 29029348 29036235 - 116896281 MODEL JAAIVD010000025;XM_032897364 XP_032753255 protein-coding 625860607 LOC116897412 U6 spliceosomal RNA 3 2730255 2730361 - 116897412 MODEL JAAIVD010000012;XR_004387454 snrna 625860610 LOC116895689 heterogeneous nuclear ribonucleoprotein K-like 3 203701499 203703145 - 116895689 MODEL JAAIVD010000012;XR_004387300 pseudo 625860613 LOC116903699 mesoderm-specific transcript homolog protein-like 6 6781251 6782068 + 116903699 MODEL JAAIVD010000024 pseudo 625860614 Ftsj3 FtsJ RNA 2'-O-methyltransferase 3 ENCODES a protein that exhibits RNA 2'-O-methyltransferase activity (ortholog); INVOLVED IN RNA methylation (ortholog); FOUND IN nucleolus (ortholog) 9 72863871 72870590 + 22301074;30032202 116909829 MODEL JAAIVD010000002;XM_032913546 XP_032769437 pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3 protein-coding 625860639 LOC116885907 mucin-3A-like 16 16776856 16791413 + 30032202 116885907 MODEL JAAIVD010000004;XM_032887222 XP_032743113 protein-coding 625860653 LOC116893050 nuclear transport factor 2-like 2 32467373 32467749 + 116893050 MODEL JAAIVD010000001 pseudo 625860654 LOC116909020 C-C motif chemokine 7 9 88421098 88422954 - 22301074;30032202 116909020 MODEL JAAIVD010000002;XM_032912496 XP_032768387 protein-coding 625860661 Dll1 delta like canonical Notch ligand 1 ENCODES a protein that exhibits Notch binding (ortholog); receptor ligand activity (ortholog); scaffold protein binding (ortholog); INVOLVED IN astrocyte development (ortholog); cell-cell signaling (ortholog); cerebellar molecular layer formation (ortholog); PARTICIPATES IN Notch signaling pathway; Notch signaling pathway; ASSOCIATED WITH Brain Neoplasms (ortholog); Breast Neoplasms (ortholog); chronic pancreatitis (ortholog); FOUND IN adherens junction (ortholog); apical plasma membrane (ortholog); cytoplasmic vesicle (ortholog) 14 632774 640362 + 22301074;30032202 116884042 MODEL JAAIVD010000009;XM_032885288 XP_032741179 delta-like protein 1 protein-coding 625860676 Tubb2a tubulin beta 2A class IIa INVOLVED IN cerebral cortex development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cerebellar hypoplasia (ortholog); complex cortical dysplasia with other brain malformations 5 (ortholog); FOUND IN ciliary tip (ortholog); cilium (ortholog); intercellular bridge (ortholog) 14 52646114 52649786 - 22301074;30032202 116884059 MODEL JAAIVD010000009;XM_032885306 XP_032741197 tubulin beta-2A chain protein-coding 625860684 LOC116887145 small nuclear ribonucleoprotein G-like 18 977783 981224 - 116887145 MODEL JAAIVD010000013 pseudo 625860685 Gpr150 G protein-coupled receptor 150 ASSOCIATED WITH Ovarian Neoplasms (ortholog) 3 221145094 221147232 + 22301074;30032202 116897357 MODEL JAAIVD010000012;XM_032899115;XM_032899116 XP_032755006;XP_032755007 probable G-protein coupled receptor 150 protein-coding 625860694 LOC116914581 short transmembrane mitochondrial protein 1-like 13 69562709 69562852 + 116914581 MODEL JAAIVD010000008;XM_032918940 XP_032774831 protein-coding 625860697 Trappc3 trafficking protein particle complex subunit 3 INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); FOUND IN cytosol (ortholog); Golgi membrane (ortholog); TRAPP complex (ortholog) 1 32011959 32026296 - 22301074;30032202 116896643 MODEL JAAIVD010000025;XM_032897969;XM_032897978 XP_032753860;XP_032753869 trafficking protein particle complex 3 protein-coding 625860709 Tmem170b transmembrane protein 170B INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); FOUND IN plasma membrane (ortholog) 14 60588753 60621269 + 30032202 116883426 MODEL JAAIVD010000009;XM_032884557 XP_032740448 protein-coding 625860716 LOC116914798 non-specific lipid-transfer protein-like 13 28566668 28567461 + 30032202 116914798 MODEL JAAIVD010000008;XM_032919248 XP_032775139 protein-coding 625860721 LOC116894754 40S ribosomal protein S24-like 2 165827354 165827969 + 116894754 MODEL JAAIVD010000001 pseudo 625860722 Mrps9 mitochondrial ribosomal protein S9 FOUND IN mitochondrion (ortholog) 4 119010566 119062683 + 22301074;30032202 116899338 MODEL JAAIVD010000003;XM_032901025 XP_032756916 28S ribosomal protein S9, mitochondrial protein-coding 625860737 LOC116907969 uncharacterized LOC116907969 1 168893316 168901478 + 116907969 MODEL JAAIVD010000025;XR_004388859 ncrna 625860742 LOC116900835 deoxycytidylate deaminase-like 5 49982612 49983166 - 116900835 MODEL JAAIVD010000023 pseudo 625860743 Ctnnd1 catenin delta 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); cadherin binding (ortholog); cell adhesion molecule binding (ortholog); INVOLVED IN cell adhesion (ortholog); cell migration involved in sprouting angiogenesis (ortholog); cell-cell adhesion (ortholog); PARTICIPATES IN E-cadherin signaling pathway; fibroblast growth factor signaling pathway; N-cadherin signaling pathway; ASSOCIATED WITH blepharocheilodontic syndrome 2 (ortholog); COVID-19 (ortholog); oral squamous cell carcinoma (ortholog); FOUND IN adherens junction (ortholog); apicolateral plasma membrane (ortholog); bicellular tight junction (ortholog) 5 61982929 62033046 - 30032202 116901581 MODEL JAAIVD010000023;XM_032903584;XM_032903585;XM_032903586;XM_032903587;XM_032903588;XM_032903589;XM_032903590;XM_032903591;XM_032903592;XM_032903594 XP_032759475;XP_032759476;XP_032759477;XP_032759478;XP_032759479;XP_032759480;XP_032759481;XP_032759482;XP_032759483;XP_032759485 catenin delta-1 protein-coding 625860786 Ptprn2 protein tyrosine phosphatase receptor type N2 INVOLVED IN insulin secretion involved in cellular response to glucose stimulus (ortholog); negative regulation of GTPase activity (ortholog); neurotransmitter secretion (ortholog); ASSOCIATED WITH prediabetes syndrome (ortholog); prostate cancer (ortholog); type 1 diabetes mellitus (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog); presynapse (ortholog); secretory granule (ortholog) 7 118845382 119570869 - 22301074;30032202 116905399 MODEL JAAIVD010000026;XM_032908352 XP_032764243 receptor-type tyrosine-protein phosphatase N2 protein-coding 625860813 LOC116888289 heterogeneous nuclear ribonucleoprotein A1-like X 116935475 116936710 + 116888289 MODEL JAAIVD010000014 pseudo 625860814 Twist1 twist family bHLH transcription factor 1 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN aortic valve morphogenesis (ortholog); bone development (ortholog); cardiac neural crest cell development involved in outflow tract morphogenesis (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH acrocephalosyndactylia (ortholog); anaplastic large cell lymphoma (ortholog); breast cancer (ortholog); FOUND IN nucleus (ortholog) 7 47301838 47302508 + 22301074;30032202 116905668 MODEL JAAIVD010000026;XM_032908652 XP_032764543 twist-related protein 1 protein-coding 625860818 Mro maestro ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) 15 58112656 58128738 - 30032202 116884739 MODEL JAAIVD010000010;XM_032885952;XM_032885953;XM_032885954;XM_032885955;XM_032885956;XM_032885957;XM_032885958 XP_032741843;XP_032741844;XP_032741845;XP_032741846;XP_032741847;XP_032741848;XP_032741849 protein maestro protein-coding 625860847 LOC116893508 60S ribosomal protein L19-like 2 187130914 187131479 - 116893508 MODEL JAAIVD010000001 pseudo 625860848 LOC116887541 40S ribosomal protein S14-like 18 19984120 19984628 + 116887541 MODEL JAAIVD010000013 pseudo 625860849 Thy1 Thy-1 cell surface antigen ENCODES a protein that exhibits enzyme binding (ortholog); GPI anchor binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell-cell adhesion (ortholog); cell-cell signaling (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); Reperfusion Injury (ortholog); retinal disease (ortholog); FOUND IN apical plasma membrane (ortholog); axolemma (ortholog); cell surface (ortholog) 8 38607326 38612426 + 116907076 MODEL JAAIVD010000027;XM_032910030 XP_032765921 thy-1 membrane glycoprotein protein-coding 625860857 Odam odontogenic, ameloblast associated INVOLVED IN inflammatory response (ortholog); odontogenesis (ortholog); odontogenesis of dentin-containing tooth (ortholog); FOUND IN cell periphery (ortholog); cytoplasm (ortholog); cytosol (ortholog) 11 1078909 1088205 - 116912797 MODEL JAAIVD010000006;XM_032916962 XP_032772853 odontogenic ameloblast-associated protein protein-coding 625860873 LOC116896943 60S ribosomal protein L19-like 3 119212530 119213171 + 116896943 MODEL JAAIVD010000012 pseudo 625860874 LOC116913966 olfactory receptor 1509 ENCODES a protein that exhibits copper ion binding (ortholog); odorant binding (ortholog); olfactory receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception (ortholog); detection of chemical stimulus involved in sensory perception of smell (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) 12 71442670 71443596 - 22301074 116913966 MODEL JAAIVD010000007;XM_032918234 XP_032774125 protein-coding 625860877 Pagr1 PAXIP1 associated glutamate rich protein 1 ENCODES a protein that exhibits nuclear estrogen receptor binding (ortholog); INVOLVED IN chorion development (ortholog); DNA damage response (ortholog); positive regulation of cell cycle G1/S phase transition (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH dilated cardiomyopathy (ortholog); esophagus squamous cell carcinoma (ortholog); lung metastasis (ortholog); FOUND IN histone methyltransferase complex (ortholog); MLL3/4 complex (ortholog); nucleus (ortholog) 2 74876388 74878376 + 116891492 MODEL JAAIVD010000001;XM_032892598 XP_032748489 PAXIP1-associated glutamate-rich protein 1 protein-coding 625860884 LOC116889860 glyceraldehyde-3-phosphate dehydrogenase-like 1 154066614 154067622 - 116889860 MODEL JAAIVD010000025 pseudo 625860885 Slc46a3 solute carrier family 46 member 3 ENCODES a protein that exhibits copper ion transmembrane transporter activity (ortholog); transmembrane transporter activity (ortholog); INVOLVED IN cellular response to 2,3,7,8-tetrachlorodibenzodioxine (ortholog); vacuolar transmembrane transport (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN lysosomal membrane (ortholog) 16 5960832 5976304 + 22301074;30032202 116885791 MODEL JAAIVD010000004;XM_032887123 XP_032743014 protein-coding 625860895 Strn4 striatin 4 ENCODES a protein that exhibits armadillo repeat domain binding (ortholog); protein domain specific binding (ortholog); protein phosphatase 2A binding (ortholog); INVOLVED IN negative regulation of hippo signaling (ortholog); regulation of modification of postsynaptic structure (ortholog); FOUND IN cytoplasm (ortholog); dendritic spine (ortholog); FAR/SIN/STRIPAK complex (ortholog) 2 172251724 172276833 - 30032202 116892567 MODEL JAAIVD010000001;XM_032894344;XM_032894345 XP_032750235;XP_032750236 striatin-4 protein-coding 625860921 Cilp cartilage intermediate layer protein ENCODES a protein that exhibits alkaline phosphatase activity (ortholog); dinucleotide phosphatase activity (ortholog); INVOLVED IN negative regulation of gene expression (ortholog); negative regulation of insulin-like growth factor receptor signaling pathway (ortholog); negative regulation of SMAD protein signal transduction (ortholog); ASSOCIATED WITH Intervertebral Disc Disease (ortholog); osteoarthritis (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) 8 59563061 59577815 + 22301074 116907301 MODEL JAAIVD010000027;XM_032910249 XP_032766140 cartilage intermediate layer protein 1 protein-coding 625860934 LOC116885516 vomeronasal type-1 receptor 3-like 1 214784576 214789390 - 116885516 MODEL JAAIVD010000025 pseudo 625860935 LOC116895041 small nucleolar RNA SNORA17 2 211333549 211333672 - 116895041 MODEL JAAIVD010000001 pseudo 625860936 C1H1orf94 chromosome 1 C1orf94 homolog INVOLVED IN intracellular protein localization (ortholog); mRNA destabilization (ortholog); single fertilization (ortholog) 1 30161105 30204340 + 116886932 MODEL JAAIVD010000025;XM_032888430 XP_032744321 uncharacterized protein C1orf94 homolog protein-coding 625860946 Trim41 tripartite motif containing 41 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to muramyl dipeptide (ortholog); defense response to virus (ortholog); FOUND IN cytosol (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) 9 31407117 31417859 - 22301074;30032202 116908982 MODEL JAAIVD010000002;XM_032912452 XP_032768343 E3 ubiquitin-protein ligase TRIM41 protein-coding 625860956 Fam110b family with sequence similarity 110 member B FOUND IN cytosol (ortholog); mitochondrion (ortholog) 1 137093295 137227508 - 116903632 MODEL JAAIVD010000025;XM_032906296 XP_032762187 protein FAM110B protein-coding 625860963 Ddi2 DDI proteasomal shuttling factor 2 ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); identical protein binding (ortholog); ubiquitin binding (ortholog); INVOLVED IN cellular response to hydroxyurea (ortholog); proteasomal protein catabolic process (ortholog); protein processing (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 1 16428745 16462251 + 22301074 116893263 MODEL JAAIVD010000025;XM_032895119 XP_032751010 DNA damage inducible 1 homolog 2;protein DDI1 homolog 2 protein-coding 625860976 Nipa1 NIPA magnesium transporter 1 INVOLVED IN magnesium ion transport (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary spastic paraplegia (ortholog); hereditary spastic paraplegia 10 (ortholog); FOUND IN early endosome (ortholog); plasma membrane (ortholog) 2 143179904 143219390 + 22301074;30032202 116892043 MODEL JAAIVD010000001;XM_032893507 XP_032749398 magnesium transporter NIPA1 protein-coding 625860985 LOC116904218 kinesin-like protein KIF1C 1 143268408 143271181 + 116904218 MODEL JAAIVD010000025 pseudo 625860986 Alkbh4 alkB homolog 4, lysine demethylase ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); actin binding (ortholog); broad specificity oxidative DNA demethylase activity (ortholog); INVOLVED IN actomyosin structure organization (ortholog); cleavage furrow ingression (ortholog); positive regulation of gene expression, epigenetic (ortholog); FOUND IN contractile ring (ortholog); midbody (ortholog) 16 17867789 17874828 - 30032202 116885753 MODEL JAAIVD010000004;XM_032887069 XP_032742960 alpha-ketoglutarate-dependent dioxygenase alkB homolog 4 protein-coding 625860993 Cabp4 calcium binding protein 4 ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN photoreceptor cell morphogenesis (ortholog); phototransduction (ortholog); retinal bipolar neuron differentiation (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH achromatopsia (ortholog); Aland Island eye disease (ortholog); cone dystrophy (ortholog); FOUND IN cytosol (ortholog) 2 3502653 3507269 + 22301074 116890787 MODEL JAAIVD010000001;XM_032891257 XP_032747148 calcium-binding protein 4 protein-coding 625861003 Tigd3 tigger transposable element derived 3 2 1802440 1805226 + 22301074;30032202 116890691 MODEL JAAIVD010000001;XM_032891107;XM_032891109 XP_032746998;XP_032747000 tigger transposable element-derived protein 3 protein-coding 625861013 Pgghg protein-glucosylgalactosylhydroxylysine glucosidase ENCODES a protein that exhibits protein-glucosylgalactosylhydroxylysine glucosidase activity (ortholog); INVOLVED IN carbohydrate metabolic process (ortholog); FOUND IN cytosol (ortholog) 2 8533900 8539209 - 22301074 116890893 MODEL JAAIVD010000001;XM_032891508;XM_032891509 XP_032747399;XP_032747400 protein-coding 625861033 Dnaaf3 dynein axonemal assembly factor 3 INVOLVED IN axonemal dynein complex assembly (ortholog); brain development (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); Kartagener syndrome (ortholog); primary ciliary dyskinesia (ortholog) 2 177125036 177132715 - 30032202 116892654 MODEL JAAIVD010000001;XM_032894477 XP_032750368 dynein assembly factor 3, axonemal protein-coding 625861049 Ptf1a pancreas associated transcription factor 1a ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN amacrine cell differentiation (ortholog); cell differentiation (ortholog); cell fate commitment (ortholog); ASSOCIATED WITH cerebellar disease (ortholog); Chemical and Drug Induced Liver Injury (ortholog); Decreased Urinary Activity of Kallikrein (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) 14 4650658 4652493 - 22301074;30032202 116884048 MODEL JAAIVD010000009;XM_032885294 XP_032741185 pancreas transcription factor 1 subunit alpha protein-coding 625861055 LOC116899893 small nucleolar RNA SNORA17 4 103736851 103736958 + 116899893 MODEL JAAIVD010000003 pseudo 625861056 LOC116884881 ATP synthase subunit g, mitochondrial-like 15 31112611 31113547 - 116884881 MODEL JAAIVD010000010 pseudo 625861057 LOC116902761 lithostathine-2-like 6 67904364 67906632 - 30032202 116902761 MODEL JAAIVD010000024;XM_032905109 XP_032761000 protein-coding 625861064 LOC116896546 40S ribosomal protein S20-like 3 61688327 61688839 - 22301074;30032202 116896546 MODEL JAAIVD010000012;XM_032897735 XP_032753626 protein-coding 625861069 Atp9b ATPase phospholipid transporting 9B ASSOCIATED WITH Cocaine-Related Disorders (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog); trans-Golgi network (ortholog) 15 51307616 51496015 + 22301074;30032202 116884605 MODEL JAAIVD010000010;XM_032885744;XM_032885745 XP_032741635;XP_032741636 ATPase phospholipid transporting 9B (putative);probable phospholipid-transporting ATPase IIB APPROVED protein-coding 625861104 Tnni3 troponin I3, cardiac type ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); calcium channel inhibitor activity (ortholog); INVOLVED IN cardiac muscle contraction (ortholog); heart contraction (ortholog); heart development (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2L (ortholog); cardiac amyloidosis (ortholog); FOUND IN cardiac myofibril (ortholog); cardiac Troponin complex (ortholog); contractile muscle fiber (ortholog) 2 177120565 177125037 - 22301074;30032202 116893446 MODEL JAAIVD010000001;XM_032895213 XP_032751104 troponin I, cardiac muscle protein-coding 625861115 LOC116914021 high mobility group protein B1-like 12 79849642 79850249 + 116914021 MODEL JAAIVD010000007 pseudo 625861116 Fam161a FAM161 centrosomal protein A ENCODES a protein that exhibits identical protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN cilium assembly (ortholog); cilium organization (ortholog); ASSOCIATED WITH cone-rod dystrophy (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN astral microtubule (ortholog); centriole (ortholog); centrosome (ortholog) 11 93871571 93877524 - 30032202 116912773 MODEL JAAIVD010000006;XM_032916924 XP_032772815 protein FAM161A protein-coding 625861123 Lhfpl7 LHFPL tetraspan subfamily member 7 16 40734567 40739195 - 30032202 116885246 MODEL JAAIVD010000004;XM_032886485 XP_032742376 Tmem211 transmembrane protein 211 protein-coding 625861128 LOC116885691 protein CUSTOS-like 16 2135923 2136795 + 116885691 MODEL JAAIVD010000004 pseudo 625861129 Bnip2 BCL2 interacting protein 2 INVOLVED IN blastocyst development (ortholog); centrosome cycle (ortholog); positive regulation of MAPK cascade (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; FOUND IN centriole (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 64333782 64354828 + 30032202 116908145 MODEL JAAIVD010000027;XM_032911437;XM_032911438 XP_032767328;XP_032767329 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 protein-coding 625861147 LOC116889547 U2 spliceosomal RNA X 15971648 15971839 + 116889547 MODEL JAAIVD010000014;XR_004386481 snrna 625861150 LOC116900105 uncharacterized LOC116900105 5 12799984 12803522 - 116900105 MODEL JAAIVD010000023;XR_004387918 ncrna 625861154 Prss37 serine protease 37 INVOLVED IN binding of sperm to zona pellucida (ortholog); cell migration (ortholog); positive regulation of acrosome reaction (ortholog); FOUND IN acrosomal vesicle (ortholog) 6 99278563 99286227 + 22301074;30032202 116902884 MODEL JAAIVD010000024;XM_032905216 XP_032761107 probable inactive serine protease 37 protein-coding 625861164 LOC116898502 T-complex protein 1 subunit zeta-like 4 126612335 126613010 - 116898502 MODEL JAAIVD010000003 pseudo 625861165 LOC116894914 U7 small nuclear RNA 2 103895856 103895918 + 116894914 MODEL JAAIVD010000001;XR_004387116 snrna 625861168 LOC116889211 40S ribosomal protein S27-like X 107570990 107571245 + 116889211 MODEL JAAIVD010000014 pseudo 625861169 LOC116906592 uncharacterized LOC116906592 8 64549001 64565170 - 116906592 MODEL JAAIVD010000027;XR_004388752 ncrna 625861174 Jph3 junctophilin 3 INVOLVED IN exploration behavior (ortholog); learning (ortholog); locomotion (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); genetic disease (ortholog); Huntington's disease-like 2 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); junctional membrane complex (ortholog) 17 41381644 41443174 + 22301074;30032202 116886199 MODEL JAAIVD010000011;XM_032887585 XP_032743476 junctophilin-3 protein-coding 625861183 Pacrgl parkin coregulated like 11 57584133 57602552 - 116911946 MODEL JAAIVD010000006;XM_032915857;XM_032915858;XM_032915859;XR_004389410;XR_004389411 XP_032771748;XP_032771749;XP_032771750 PACRG-like protein protein-coding 625861204 Arl11 ARF like GTPase 11 INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Ovarian Neoplasms (ortholog) 12 63101725 63102715 - 22301074;30032202 116913629 MODEL JAAIVD010000007;XM_032917895 XP_032773786 ADP ribosylation factor like GTPase 11;ADP-ribosylation factor-like protein 11 protein-coding 625861209 LOC116915098 histone-binding protein RBBP7-like 13 13589216 13590665 - 116915098 MODEL JAAIVD010000008 pseudo 625861210 LOC116901751 60S ribosomal protein L30-like 5 90922945 90923333 + 116901751 MODEL JAAIVD010000023 pseudo 625861211 LOC116893333 glandular kallikrein-10-like 2 155443233 155445765 - 116893333 MODEL JAAIVD010000001 pseudo 625861212 Ankrd13a ankyrin repeat domain 13A ENCODES a protein that exhibits ubiquitin-modified protein reader activity (ortholog); INVOLVED IN negative regulation of protein localization to endosome (ortholog); negative regulation of receptor internalization (ortholog); FOUND IN cytoplasm (ortholog); late endosome (ortholog); perinuclear region of cytoplasm (ortholog) 16 39149746 39179646 - 22301074;30032202 116885197 MODEL JAAIVD010000004;XM_032886421;XM_032886422 XP_032742312;XP_032742313 ankyrin repeat domain-containing protein 13A protein-coding 625861233 LOC116884001 elongation factor 1-gamma-like 14 20660 21946 - 116884001 MODEL JAAIVD010000009 pseudo 625861234 Dcaf10 DDB1 and CUL4 associated factor 10 FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog) 1 1126189 1163024 - 22301074;30032202 116890776 MODEL JAAIVD010000025;XM_032891247 XP_032747138 DDB1- and CUL4-associated factor 10 protein-coding 625861245 LOC116913506 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4 1 249151666 249152216 - 30032202 116913506 MODEL JAAIVD010000025;XM_032917714 XP_032773605 protein-coding 625861251 Trnav-aac transfer RNA valine (anticodon AAC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42416447 42416519 - 116884178 MODEL JAAIVD010000009 trna 625861252 Ddx18 DEAD-box helicase 18 INVOLVED IN cellular response to estradiol stimulus (ortholog); PARTICIPATES IN ribosome biogenesis pathway; FOUND IN chromosome (ortholog); nucleolus (ortholog) 10 14143619 14157220 - 22301074;30032202 116911406 MODEL JAAIVD010000005;XM_032915367 XP_032771258 ATP-dependent RNA helicase DDX18 protein-coding 625861269 Klhl15 kelch like family member 15 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN negative regulation of double-strand break repair via homologous recombination (ortholog); nuclear protein quality control by the ubiquitin-proteasome system (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH autistic disorder (ortholog); non-syndromic X-linked intellectual disability 103 (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); nucleus (ortholog) X 52189535 52236848 + 22301074;30032202 116888498 MODEL JAAIVD010000014;XM_032889782;XM_032889783;XM_032889784;XM_032889785;XM_032889786;XM_032889787;XM_032889788;XM_032889789 XP_032745673;XP_032745674;XP_032745675;XP_032745676;XP_032745677;XP_032745678;XP_032745679;XP_032745680 kelch-like protein 15 protein-coding 625861298 LOC116895078 small nucleolar RNA SNORD23 2 173008610 173008718 - 116895078 MODEL JAAIVD010000001;XR_004387247 snorna 625861301 Tgfb3 transforming growth factor beta 3 ENCODES a protein that exhibits identical protein binding (ortholog); protein-containing complex binding (ortholog); transforming growth factor beta binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); cell-cell junction organization (ortholog); cellular response to growth factor stimulus (ortholog); PARTICIPATES IN glypican signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); arrhythmogenic right ventricular dysplasia 1 (ortholog); Brugada syndrome (ortholog); FOUND IN cell surface (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) 7 100152665 100174682 - 22301074;30032202 116905303 MODEL JAAIVD010000026;XM_032908186;XM_032908187 XP_032764077;XP_032764078 transforming growth factor beta-3 proprotein protein-coding 625861316 LOC116893704 olfactory receptor 5B12-like 2 13228036 13228988 + 22301074;30032202 116893704 MODEL JAAIVD010000001;XM_032895420 XP_032751311 protein-coding 625861319 LOC116892051 vomeronasal type-1 receptor 4-like 2 143737636 143738597 + 22301074;30032202 116892051 MODEL JAAIVD010000001;XM_032893522 XP_032749413 protein-coding 625861322 LOC116898352 protein CEBPZOS-like 4 54298098 54298325 + 116898352 MODEL JAAIVD010000003 pseudo 625861323 Ccdc80 coiled-coil domain containing 80 ENCODES a protein that exhibits fibronectin binding (ortholog); glycosaminoglycan binding (ortholog); heparin binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); positive regulation of cell-substrate adhesion (ortholog); response to bacterium (ortholog); ASSOCIATED WITH atopic dermatitis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); interstitial matrix (ortholog) 4 29856597 29890041 + 116898869 MODEL JAAIVD010000003;XM_032900237 XP_032756128 coiled-coil domain-containing protein 80 protein-coding 625861335 Pyroxd1 pyridine nucleotide-disulphide oxidoreductase domain 1 ENCODES a protein that exhibits molecular sensor activity (ortholog); NAD(P)H oxidase H2O2-forming activity (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); tRNA exon ligation (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); sarcomere (ortholog) 6 100298 116627 + 22301074 116903064 MODEL JAAIVD010000024;XM_032905363 XP_032761254 pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1 protein-coding 625861351 Glipr1l1 GLIPR1 like 1 ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); protein localization involved in acrosome reaction (ortholog); FOUND IN acrosomal vesicle (ortholog); outer acrosomal membrane (ortholog); protein complex involved in cell-cell adhesion (ortholog) 1 190268864 190292029 - 22301074;30032202 116890013 MODEL JAAIVD010000025;XM_032890797 XP_032746688 GLIPR1-like protein 1 protein-coding 625861360 Gpr15lg G protein-coupled receptor 15 ligand ENCODES a protein that exhibits chemokine activity (ortholog); G protein-coupled receptor binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN defense response to fungus (ortholog); defense response to Gram-positive bacterium (ortholog); G protein-coupled receptor signaling pathway (ortholog); FOUND IN extracellular region (ortholog) 13 15574859 15582422 - 22301074 116914751 MODEL JAAIVD010000008;XM_032919198 XP_032775089 C13H10orf99 chromosome 13 C10orf99 homolog;protein GPR15L protein-coding 625861367 LOC116914041 uncharacterized LOC116914041 12 76654153 76655277 - 116914041 MODEL JAAIVD010000007;XR_004389661 ncrna 625861372 LOC116889264 40S ribosomal protein S17-like X 95323367 95323864 + 116889264 MODEL JAAIVD010000014 pseudo 625861373 Serpina10 serpin family A member 10 INVOLVED IN liver regeneration (ortholog); regulation of acrosome reaction (ortholog); PARTICIPATES IN coagulation cascade pathway; ASSOCIATED WITH Liver Metastasis (ortholog); nephrotic syndrome type 5 (ortholog); small intestine carcinoid neuroendocrine tumor (ortholog) 7 114890414 114898871 - 22301074;30032202 116905376 MODEL JAAIVD010000026;XM_032908313;XM_032908314 XP_032764204;XP_032764205 protein Z-dependent protease inhibitor protein-coding 625861385 LOC116899956 ribosome biogenesis regulatory protein homolog 5 15004278 15005442 + 116899956 MODEL JAAIVD010000023 pseudo 625861386 LOC116894746 U11/U12 small nuclear ribonucleoprotein 48 kDa protein-like 2 118862270 118871820 - 116894746 MODEL JAAIVD010000001 pseudo 625861387 LOC116894397 keratin-associated protein 20-2-like 2 157174883 157175044 + 116894397 MODEL JAAIVD010000001;XM_032896105 XP_032751996 protein-coding 625861390 Pik3r3 phosphoinositide-3-kinase regulatory subunit 3 ENCODES a protein that exhibits 1-phosphatidylinositol-3-kinase regulator activity (ortholog); phosphotyrosine residue binding (ortholog); INVOLVED IN cell migration involved in sprouting angiogenesis (ortholog); insulin receptor signaling pathway (ortholog); phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; FasL mediated signaling pathway; phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); Colorectal Neoplasms (ortholog); hepatocellular carcinoma (ortholog); FOUND IN phosphatidylinositol 3-kinase complex (ortholog) 1 39901346 39970818 + 30032202 116898326 MODEL JAAIVD010000025;XM_032899661 XP_032755552 phosphatidylinositol 3-kinase regulatory subunit gamma protein-coding 625861404 Nhlh1 nescient helix-loop-helix 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog) 10 51170000 51175355 - 22301074;30032202 116911379 MODEL JAAIVD010000005;XM_032915321 XP_032771212 helix-loop-helix protein 1 protein-coding 625861410 LOC116905587 FUN14 domain-containing protein 2-like 7 3954937 3956139 - 116905587 MODEL JAAIVD010000026 pseudo 625861411 LOC116897051 uncharacterized LOC116897051 3 149568700 149607778 - 116897051 MODEL JAAIVD010000012;XR_004387391 ncrna 625861416 Slc67a2 solute carrier family 67 member 2 4 116988393 117007421 - 22301074 116899329 MODEL JAAIVD010000003;XM_032901020;XM_032901021;XM_032901022 XP_032756911;XP_032756912;XP_032756913 Mfsd9 major facilitator superfamily domain containing 9;major facilitator superfamily domain-containing protein 9 protein-coding 625861432 LOC116895581 glyceraldehyde-3-phosphate dehydrogenase-like 3 141901289 141902299 - 116895581 MODEL JAAIVD010000012 pseudo 625861433 Gpank1 G-patch domain and ankyrin repeats 1 18 7720773 7724115 + 22301074 116887078 MODEL JAAIVD010000013;XM_032888584;XM_032888585;XM_032888586;XM_032888587;XM_032888588 XP_032744475;XP_032744476;XP_032744477;XP_032744478;XP_032744479 G patch domain and ankyrin repeat-containing protein 1 protein-coding 625861452 LOC116893591 non-structural maintenance of chromosomes element 3 homolog 2 2170047 2171218 + 30032202 116893591 MODEL JAAIVD010000001;XM_032895289 XP_032751180 protein-coding 625861457 LOC116912055 probable ATP-dependent RNA helicase DDX5 11 92439587 92444684 + 116912055 MODEL JAAIVD010000006 pseudo 625861458 Trnav-uac transfer RNA valine (anticodon UAC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 12105946 12106018 + 116895126 MODEL JAAIVD010000001 trna 625861459 Cdc26 cell division cycle 26 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); FOUND IN anaphase-promoting complex (ortholog) 1 91125220 91140016 + 22301074;30032202 116901416 MODEL JAAIVD010000025;XM_032903307;XM_032903315;XM_032903322 XP_032759198;XP_032759206;XP_032759213 anaphase-promoting complex subunit CDC26 protein-coding 625861474 Prxl2a peroxiredoxin like 2A ENCODES a protein that exhibits antioxidant activity (ortholog); INVOLVED IN regulation of osteoclast differentiation (ortholog); FOUND IN cytoplasm (ortholog) 13 19508763 19528262 - 116914672 MODEL JAAIVD010000008;XM_032919078;XM_032919079 XP_032774969;XP_032774970 peroxiredoxin-like 2A protein-coding 625861488 Ca10 carbonic anhydrase 10 (inactive) ASSOCIATED WITH asthma (ortholog) 9 51914947 52404770 - 30032202 116908475 MODEL JAAIVD010000002;XM_032911624 XP_032767515 carbonic anhydrase 10;carbonic anhydrase-related protein 10 APPROVED protein-coding 625861501 Trnar-acg transfer RNA arginine (anticodon ACG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42523918 42523990 - 116884190 MODEL JAAIVD010000009 trna 625861502 LOC116910356 actin, cytoskeletal 4-like 9 71937261 71937910 - 116910356 MODEL JAAIVD010000002 pseudo 625861503 Dmrtb1 DMRT like family B with proline rich C-terminal 1 1 47141714 47149369 + 30032202 116887550 MODEL JAAIVD010000025;XM_032889184 XP_032745075 doublesex- and mab-3-related transcription factor B1 protein-coding 625861511 Mmd2 monocyte to macrophage differentiation associated 2 ENCODES a protein that exhibits protein kinase activity (ortholog); INVOLVED IN positive regulation of neuron differentiation (ortholog); positive regulation of protein kinase activity (ortholog); positive regulation of Ras protein signal transduction (ortholog); FOUND IN Golgi membrane (ortholog); perinuclear region of cytoplasm (ortholog) 16 10532046 10577466 + 22301074;30032202 116885590 MODEL JAAIVD010000004;XM_032886894;XM_032886895 XP_032742785;XP_032742786 monocyte to macrophage differentiation factor 2 protein-coding 625861527 LOC116913384 olfactory receptor 49 ENCODES a protein that exhibits isoprenoid binding (ortholog); olfactory receptor activity (ortholog) 12 70716593 70717537 + 22301074;30032202 116913384 MODEL JAAIVD010000007;XM_032917563 XP_032773454 protein-coding 625861530 LOC116898391 chromobox protein homolog 2-like 4 75997646 75999268 + 116898391 MODEL JAAIVD010000003 pseudo 625861531 Mov10 Mov10 RNA helicase ENCODES a protein that exhibits 5'-3' RNA helicase activity (ortholog); RNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); defense response to virus (ortholog); miRNA-mediated gene silencing by mRNA destabilization (ortholog); ASSOCIATED WITH hypertension (ortholog); primary ovarian insufficiency (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); cytosol (ortholog); nucleus (ortholog) 3 53297916 53319607 + 22301074 116896426 MODEL JAAIVD010000012;XM_032897572 XP_032753463 Mov10 RISC complex RNA helicase;helicase MOV-10 protein-coding 625861556 Mynn myoneurin INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); ASSOCIATED WITH chronic recurrent multifocal osteomyelitis (ortholog); FOUND IN nucleoplasm (ortholog) 3 124832013 124848150 + 22301074;30032202 116896973 MODEL JAAIVD010000012;XM_032898552;XM_032898553;XM_032898554;XM_032898555 XP_032754443;XP_032754444;XP_032754445;XP_032754446 protein-coding 625861573 Nmi N-myc and STAT interactor ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN macrophage activation involved in immune response (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of innate immune response (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) 5 29729268 29745070 - 30032202 116901402 MODEL JAAIVD010000023;XM_032903278 XP_032759169 N-myc-interactor protein-coding 625861585 Ift43 intraflagellar transport 43 INVOLVED IN cilium assembly (ortholog); intraciliary retrograde transport (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); connective tissue disease (ortholog); cranioectodermal dysplasia (ortholog); FOUND IN centriole (ortholog); cilium (ortholog); intercellular bridge (ortholog) 7 100206007 100255581 + 22301074;30032202 116905305 MODEL JAAIVD010000026;XM_032908188;XM_032908189 XP_032764079;XP_032764080 intraflagellar transport protein 43 homolog protein-coding 625861599 Rsph4a radial spoke head component 4A INVOLVED IN axoneme assembly (ortholog); cilium movement (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); bronchiectasis (ortholog); Ciliary Motility Disorders (ortholog); FOUND IN 9+2 motile cilium (ortholog); axoneme (ortholog); radial spoke head (ortholog) 18 28647279 28663331 + 22301074;30032202 116887050 MODEL JAAIVD010000013;XM_032888541 XP_032744432 radial spoke head protein 4 homolog A protein-coding 625861609 LOC116890562 small nucleolar RNA SNORA17 1 198539342 198539461 - 116890562 MODEL JAAIVD010000025 pseudo 625861610 Znhit3 zinc finger HIT-type containing 3 ASSOCIATED WITH genetic disease (ortholog); PEHO syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 9 85785650 85793852 + 22301074;30032202 116909191 MODEL JAAIVD010000002;XM_032912689 XP_032768580 zinc finger HIT domain-containing protein 3 protein-coding 625861619 LOC116904486 dimethyladenosine transferase 1, mitochondrial-like 6 146713183 146788197 + 116904486 MODEL JAAIVD010000024 pseudo 625861620 LOC116902815 putative vomeronasal receptor-like protein 4 6 83981755 83982666 - 22301074;30032202 116902815 MODEL JAAIVD010000024;XM_032905147 XP_032761038 protein-coding 625861623 LOC116891190 cytochrome P450 2B12 2 42693867 42704719 - 22301074;30032202 116891190 MODEL JAAIVD010000001;XM_032892010 XP_032747901 protein-coding 625861634 LOC116892872 LIM and senescent cell antigen-like-containing domain protein 1 2 195927951 195928940 - 116892872 MODEL JAAIVD010000001 pseudo 625861635 Tent5c terminal nucleotidyltransferase 5C ENCODES a protein that exhibits poly(A) RNA polymerase activity (ortholog); INVOLVED IN in utero embryonic development (ortholog); mRNA stabilization (ortholog); negative regulation of cell differentiation (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 3 57603139 57622056 + 22301074;30032202 116896469 MODEL JAAIVD010000012;XM_032897630 XP_032753521 protein-coding 625861641 LOC116904889 cytochrome c oxidase subunit 7C, mitochondrial-like 7 32504260 32504457 + 22301074;30032202 116904889 MODEL JAAIVD010000026;XM_032907490 XP_032763381 protein-coding 625861644 Trnam-cau transfer RNA methionine (anticodon CAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41982873 41982944 - 116884170 MODEL JAAIVD010000009 trna 625861645 Afg1l AFG1 like ATPase INVOLVED IN mitochondrial protein catabolic process (ortholog); mitochondrial protein quality control (ortholog); mitochondrion organization (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) 18 41990134 42149548 - 22301074;30032202 116887199 MODEL JAAIVD010000013;XM_032888755 XP_032744646 AFG1-like ATPase protein-coding 625861662 Ctxn2 cortexin 2 5 103460269 103460666 + 116900610 MODEL JAAIVD010000023;XM_032902327 XP_032758218 cortexin-2 protein-coding 625861667 LOC116885811 PCNA-associated factor-like 16 15454573 15454958 + 116885811 MODEL JAAIVD010000004 pseudo 625861668 LOC116900905 uncharacterized LOC116900905 5 78412895 78424012 + 30032202 116900905 MODEL JAAIVD010000023;XM_032902573 XP_032758464 uncharacterized protein LOC116900905 protein-coding 625861675 LOC116888701 protein FAM205A-2-like 1 3721412 3727756 + 116888701 MODEL JAAIVD010000025;XM_032889993 XP_032745884 protein-coding 625861681 LOC116900202 ras GTPase-activating protein-binding protein 2-like 5 51803771 51805419 + 116900202 MODEL JAAIVD010000023 pseudo 625861682 LOC116890456 small nucleolar RNA SNORD59 1 155566164 155566235 + 116890456 MODEL JAAIVD010000025;XR_004386648 snorna 625861685 Glod4 glyoxalase domain containing 4 FOUND IN mitochondrion (ortholog) 9 94931851 94949921 - 116910497 MODEL JAAIVD010000002;XM_032914389 XP_032770280 glyoxalase domain-containing protein 4 protein-coding 625861698 Tpgs2 tubulin polyglutamylase complex subunit 2 15 18692980 18740026 + 30032202 116884698 MODEL JAAIVD010000010;XM_032885882;XM_032885884 XP_032741773;XP_032741775 protein-coding 625861712 C9H17orf99 chromosome 9 C17orf99 homolog INVOLVED IN mature B cell differentiation involved in immune response (ortholog); positive regulation of immunoglobulin production in mucosal tissue (ortholog); FOUND IN extracellular region (ortholog) 9 66257631 66269871 - 116910340 MODEL JAAIVD010000002;XM_032914196 XP_032770087 protein IL-40 protein-coding 625861720 Per1 period circadian regulator 1 ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA-binding transcription factor binding (ortholog); E-box binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); alcohol withdrawal syndrome (ortholog); antidepressant type abuse (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 9 48699910 48709309 + 30032202 116909221 MODEL JAAIVD010000002;XM_032912722 XP_032768613 period circadian protein homolog 1 protein-coding 625861746 Ndufa3 NADH:ubiquinone oxidoreductase subunit A3 FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) 2 178205862 178208535 + 22301074;30032202 116892698 MODEL JAAIVD010000001;XM_032894556 XP_032750447 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3 protein-coding 625861754 LOC116914360 microtubule-associated proteins 1A/1B light chain 3B-like 13 70479284 70479908 - 116914360 MODEL JAAIVD010000008 pseudo 625861755 Pex26 peroxisomal biogenesis factor 26 ENCODES a protein that exhibits ATPase binding (ortholog); protein-containing complex binding (ortholog); protein-membrane adaptor activity (ortholog); INVOLVED IN protein import into peroxisome matrix (ortholog); protein to membrane docking (ortholog); ASSOCIATED WITH adrenoleukodystrophy (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog) 6 25544457 25556348 - 22301074;30032202 116903321 MODEL JAAIVD010000024;XM_032905756;XM_032905757 XP_032761647;XP_032761648 peroxisome assembly protein 26 protein-coding 625861767 LOC116910310 chromobox protein homolog 3-like 9 50654192 50655059 - 116910310 MODEL JAAIVD010000002 pseudo 625861768 LOC116899998 60S ribosomal protein L17-like 5 120298433 120299000 - 116899998 MODEL JAAIVD010000023 pseudo 625861769 Marco macrophage receptor with collagenous structure ENCODES a protein that exhibits amyloid-beta binding (ortholog); cargo receptor activity (ortholog); G protein-coupled receptor binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); amyloid-beta clearance (ortholog); apoptotic cell clearance (ortholog); ASSOCIATED WITH Bacterial Lung Diseases (ortholog); Clostridium Infections (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) 10 13070930 13104621 - 22301074 116911673 MODEL JAAIVD010000005;XM_032915627 XP_032771518 macrophage receptor MARCO protein-coding 625861790 Asprv1 aspartic peptidase retroviral like 1 ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); INVOLVED IN protein processing (ortholog); skin development (ortholog); ASSOCIATED WITH genetic disease (ortholog); ichthyosis (ortholog); Lamellar Ichthyosis, Autosomal Dominant Form (ortholog) 6 59678433 59679959 - 22301074;30032202 116902743 MODEL JAAIVD010000024;XM_032905091 XP_032760982 retroviral-like aspartic protease 1 protein-coding 625861794 Sgsm2 small G protein signaling modulator 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN late endosome to Golgi transport (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); melanosome (ortholog) 9 93591343 93634170 - 22301074 116910540 MODEL JAAIVD010000002;XM_032914447;XM_032914448 XP_032770338;XP_032770339 protein-coding 625861825 Nsd1 nuclear receptor binding SET domain protein 1 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K36 methyltransferase activity (ortholog); histone H4K20 methyltransferase activity (ortholog); INVOLVED IN gastrulation with mouth forming second (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); autistic disorder (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 14 73532826 73638872 + 22301074;30032202 116883446 MODEL JAAIVD010000009;XM_032884593 XP_032740484 histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific protein-coding 625861853 Acer2 alkaline ceramidase 2 ENCODES a protein that exhibits N-acylsphingosine amidohydrolase activity (ortholog); INVOLVED IN cellular response to xenobiotic stimulus (ortholog); ceramide catabolic process (ortholog); DNA damage response (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) 1 67101172 67144922 - 22301074;30032202 116900452 MODEL JAAIVD010000025;XM_032902196 XP_032758087 protein-coding 625861863 LOC116893739 fructose-bisphosphate aldolase A-like 2 19994516 19995640 + 116893739 MODEL JAAIVD010000001;XR_004387002 pseudo 625861866 LOC116897105 uncharacterized protein C12orf29 homolog 3 159505986 159506927 + 116897105 MODEL JAAIVD010000012 pseudo 625861867 Adsl adenylosuccinate lyase ENCODES a protein that exhibits (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity (ortholog); identical protein binding (ortholog); N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity (ortholog); INVOLVED IN 'de novo' AMP biosynthetic process (ortholog); 'de novo' IMP biosynthetic process (ortholog); 'de novo' XMP biosynthetic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH adenylosuccinase lyase deficiency (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN cytosol (ortholog); protein-containing complex (ortholog) 1 250698722 250719763 + 22301074;30032202 116913889 MODEL JAAIVD010000025;XM_032918177 XP_032774068 protein-coding 625861884 Mki67 marker of proliferation Ki-67 ENCODES a protein that exhibits molecular condensate scaffold activity (ortholog); RNA binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); cell population proliferation (ortholog); cellular response to heat (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); adult pineal parenchymal tumor (ortholog); alcohol use disorder (ortholog); FOUND IN chromosome (ortholog); chromosome, centromeric region (ortholog); condensed chromosome (ortholog) 2 66204377 66229870 + 22301074;30032202 116891378 MODEL JAAIVD010000001;XM_032892390 XP_032748281 proliferation marker protein Ki-67 protein-coding 625861902 P2rx3 purinergic receptor P2X 3 ENCODES a protein that exhibits ATP binding (ortholog); extracellularly ATP-gated monoatomic cation channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN behavioral response to formalin induced pain (ortholog); behavioral response to pain (ortholog); calcium ion transmembrane transport (ortholog); ASSOCIATED WITH Hyperalgesia (ortholog); Nervous System Trauma (ortholog); FOUND IN axon (ortholog); dendritic spine (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog) 5 62367309 62407428 - 22301074;30032202 116900232 MODEL JAAIVD010000023;XM_032901983 XP_032757874 P2X purinoceptor 3 protein-coding 625861919 C1qa complement C1q A chain ENCODES a protein that exhibits IgG binding (ortholog); IgM binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN astrocyte activation (ortholog); complement activation, classical pathway (ortholog); complement-mediated synapse pruning (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Brain Injuries (ortholog); C1q Deficiency (ortholog); FOUND IN complement component C1 complex (ortholog); complement component C1q complex (ortholog); extracellular region (ortholog) 1 21333395 21336302 + 22301074 116886638 MODEL JAAIVD010000025;XM_032888144 XP_032744035 complement C1q subcomponent subunit A protein-coding 625861926 LOC116906128 pecanex-like protein 4 7 86707271 86740401 + 116906128 MODEL JAAIVD010000026 pseudo 625861927 LOC116898748 60S ribosomal protein L17-like 4 15505202 15505744 + 116898748 MODEL JAAIVD010000003 pseudo 625861928 Phtf1 putative homeodomain transcription factor 1 FOUND IN cis-Golgi network membrane (ortholog); endoplasmic reticulum membrane (ortholog) 3 54073189 54112026 - 30032202 116896437 MODEL JAAIVD010000012;XM_032897588;XM_032897589;XM_032897590;XM_032897591 XP_032753479;XP_032753480;XP_032753481;XP_032753482 protein-coding 625861956 LOC116906479 small nucleolar RNA SNORA17 7 20032647 20032762 - 116906479 MODEL JAAIVD010000026 pseudo 625861957 LOC116900671 cystatin-14 5 128311141 128317960 + 22301074 116900671 MODEL JAAIVD010000023;XM_032902375 XP_032758266 protein-coding 625861964 LOC116884918 ATP synthase F(0) complex subunit C1, mitochondrial-like 15 808793 809197 + 22301074;30032202 116884918 MODEL JAAIVD010000010;XM_032886140 XP_032742031 protein-coding 625861967 LOC116890302 U4 spliceosomal RNA 1 135093982 135094113 - 116890302 MODEL JAAIVD010000025 pseudo 625861968 LOC116886793 U6 spliceosomal RNA 17 12780493 12780599 + 116886793 MODEL JAAIVD010000011;XR_004386184 snrna 625861971 LOC116905167 V-type proton ATPase subunit E 1-like 1 147380675 147383173 + 116905167 MODEL JAAIVD010000025 pseudo 625861972 Ccar2 cell cycle and apoptosis regulator 2 ENCODES a protein that exhibits enzyme binding (ortholog); enzyme inhibitor activity (ortholog); RNA polymerase II complex binding (ortholog); INVOLVED IN mitochondrial fragmentation involved in apoptotic process (ortholog); negative regulation of catalytic activity (ortholog); negative regulation of cell growth (ortholog); ASSOCIATED WITH Wallerian Degeneration (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); DBIRD complex (ortholog) 12 54194054 54209417 + 30032202 116913060 MODEL JAAIVD010000007;XM_032917188;XM_032917189 XP_032773079;XP_032773080 cell cycle and apoptosis regulator protein 2 protein-coding 625861999 Melk maternal embryonic leucine zipper kinase ENCODES a protein that exhibits calcium ion binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN apoptotic process (ortholog); cell population proliferation (ortholog); intrinsic apoptotic signaling pathway in response to oxidative stress (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) 1 2148942 2209014 - 22301074;30032202 116890861 MODEL JAAIVD010000025;XM_032891431 XP_032747322 protein-coding 625862022 Nrbp1 nuclear receptor binding protein 1 ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); epithelial cell differentiation (ortholog); epithelial cell proliferation (ortholog); FOUND IN cytosol (ortholog); endomembrane system (ortholog); perinuclear region of cytoplasm (ortholog) 7 22828966 22839414 - 22301074;30032202 116905974 MODEL JAAIVD010000026;XM_032908984;XM_032908985 XP_032764875;XP_032764876 nuclear receptor-binding protein protein-coding 625862048 LOC116887983 ribosome biogenesis protein NSA2 homolog X 70596830 70598069 + 116887983 MODEL JAAIVD010000014 pseudo 625862049 LOC116883974 alpha-actinin-2-like 14 25728742 25738226 + 22301074;30032202 116883974 MODEL JAAIVD010000009;XM_032885208 XP_032741099 protein-coding 625862059 LOC116898339 proline/serine-rich coiled-coil protein 1-like 4 46394075 46396970 + 116898339 MODEL JAAIVD010000003 pseudo 625862060 Eif4a2 eukaryotic translation initiation factor 4A2 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); negative regulation of RNA-dependent RNA polymerase activity (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH genetic disease (ortholog); Neoplasm Metastasis (ortholog); neurodevelopmental disorder with hypotonia and speech delay (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog) 4 7898082 7904742 + 22301074;30032202 116898724 MODEL JAAIVD010000003;XM_032900026;XM_032900028;XM_032900029;XR_004387654;XR_004387655 XP_032755917;XP_032755919;XP_032755920 eukaryotic initiation factor 4A-II protein-coding 625862088 Cog3 component of oligomeric golgi complex 3 INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); glycoprotein biosynthetic process (ortholog); Golgi organization (ortholog); ASSOCIATED WITH congenital disorder of glycosylation type IIbb (ortholog); FOUND IN COG complex (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 12 48653474 48704131 + 30032202 116914074 MODEL JAAIVD010000007;XM_032918381 XP_032774272 conserved oligomeric Golgi complex subunit 3 protein-coding 625862115 LOC116897856 60S ribosomal protein L35a-like 4 17962847 17963271 - 116897856 MODEL JAAIVD010000003 pseudo 625862116 Ccdc85c coiled-coil domain containing 85C INVOLVED IN cell population proliferation (ortholog); cerebral cortex development (ortholog); establishment of cell polarity (ortholog); ASSOCIATED WITH hydrocephalus (ortholog); FOUND IN adherens junction (ortholog); apical junction complex (ortholog); cell junction (ortholog) 7 125873822 125946237 - 30032202 116906270 MODEL JAAIVD010000026;XM_032909158 XP_032765049 coiled-coil domain-containing protein 85C protein-coding 625862126 LOC116890815 ceramide synthase-like 1 47909461 47910225 + 116890815 MODEL JAAIVD010000025 pseudo 625862127 LOC116905218 transcription initiation factor TFIID subunit 8-like 7 94589692 94590618 - 22301074;30032202 116905218 MODEL JAAIVD010000026;XM_032908033 XP_032763924 protein-coding 625862130 LOC116894042 olfactory receptor 51G2-like 2 102519054 102520004 + 22301074 116894042 MODEL JAAIVD010000001;XM_032895762 XP_032751653 protein-coding 625862133 Rragd Ras related GTP binding D ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN cellular response to L-leucine (ortholog); cellular response to leucine starvation (ortholog); positive regulation of TORC1 signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH genetic disease (ortholog); renal hypomagnesemia 7, with or without dilated cardiomyopathy (ortholog); FOUND IN cytoplasm (ortholog); lysosome (ortholog); nucleoplasm (ortholog) 1 110023215 110057908 - 22301074;30032202 116902341 MODEL JAAIVD010000025;XM_032904826 XP_032760717 ras-related GTP-binding protein D protein-coding 625862144 LOC116884351 ATP synthase subunit a-like 15 36406200 36406774 - 116884351 MODEL JAAIVD010000010 pseudo 625862145 Ss18l2 SS18 like 2 8 112871388 112875985 + 30032202 116907975 MODEL JAAIVD010000027;XM_032911206;XR_004388860;XR_004388861 XP_032767097 SS18-like protein 2 protein-coding 625862158 Gpr139 G protein-coupled receptor 139 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); identical protein binding (ortholog); neuropeptide receptor activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog) 2 82470247 82510687 + 22301074 116893927 MODEL JAAIVD010000001;XM_032895648 XP_032751539 probable G-protein coupled receptor 139 protein-coding 625862163 LOC116883574 heterogeneous nuclear ribonucleoprotein A1-like 14 42080937 42082087 - 116883574 MODEL JAAIVD010000009 pseudo 625862164 LOC116886987 glucosamine 6-phosphate N-acetyltransferase-like 18 48690762 48693560 + 116886987 MODEL JAAIVD010000013 pseudo 625862165 LOC116906130 uncharacterized LOC116906130 7 86884724 86915769 - 116906130 MODEL JAAIVD010000026 pseudo 625862166 Gria3 glutamate ionotropic receptor AMPA type subunit 3 ENCODES a protein that exhibits AMPA glutamate receptor activity (ortholog); amyloid-beta binding (ortholog); glutamate-gated calcium ion channel activity (ortholog); INVOLVED IN cellular response to glycine (ortholog); long-term synaptic potentiation (ortholog); protein heterotetramerization (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); developmental and epileptic encephalopathy (ortholog); Developmental Disabilities (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); asymmetric synapse (ortholog); dendrite (ortholog) X 107600728 107882569 + 22301074;30032202 116888373 MODEL JAAIVD010000014;XM_032889648;XM_032889649 XP_032745539;XP_032745540 glutamate receptor 3 protein-coding 625862192 Insl3 insulin like 3 ENCODES a protein that exhibits protease binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); in utero embryonic development (ortholog); male gonad development (ortholog); ASSOCIATED WITH cryptorchidism (ortholog); genetic disease (ortholog); FOUND IN extracellular region (ortholog); perinuclear region of cytoplasm (ortholog) 13 13275785 13277722 - 22301074;30032202 116914269 MODEL JAAIVD010000008;XM_032918491 XP_032774382 insulin-like 3 protein-coding 625862198 Mrpl23 mitochondrial ribosomal protein L23 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 2 6935100 6942881 - 22301074;30032202 116890844 MODEL JAAIVD010000001;XM_032891373 XP_032747264 39S ribosomal protein L23, mitochondrial protein-coding 625862207 LOC116885632 uncharacterized LOC116885632 16 19480652 19482591 - 116885632 MODEL JAAIVD010000004;XR_004386028 ncrna 625862211 LOC116899851 small nucleolar RNA SNORA17 4 8164896 8165026 - 116899851 MODEL JAAIVD010000003;XR_004387847 snorna 625862214 LOC116888036 alpha-adducin-like X 84463061 84465490 - 116888036 MODEL JAAIVD010000014 pseudo 625862215 LOC116895883 60S ribosomal protein L34-like 1 79977719 80096173 + 116895883 MODEL JAAIVD010000025 pseudo 625862216 Prtg protogenin ENCODES a protein that exhibits identical protein binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN negative regulation of neurogenesis (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN plasma membrane (ortholog) 8 67155702 67257725 + 22301074;30032202 116906897 MODEL JAAIVD010000027;XM_032909808;XM_032909809 XP_032765699;XP_032765700 protein-coding 625862244 LOC116915003 claudin-22-like 13 40207868 40208530 - 30032202 116915003 MODEL JAAIVD010000008;XM_032919403 XP_032775294 protein-coding 625862247 LOC116905304 prohibitin-like 1 148497311 148498202 - 116905304 MODEL JAAIVD010000025 pseudo 625862248 LOC116895448 protein/nucleic acid deglycase DJ-1-like 3 74402238 74402833 - 116895448 MODEL JAAIVD010000012 pseudo 625862249 LOC116893076 PRAME family member 8-like 1 14730356 14742120 - 22301074;30032202 116893076 MODEL JAAIVD010000025;XM_032895031 XP_032750922 protein-coding 625862257 Abcf3 ATP binding cassette subfamily F member 3 ASSOCIATED WITH prostate cancer (ortholog) 4 5386060 5397783 + 22301074;30032202 116898694 MODEL JAAIVD010000003;XM_032899954;XM_032899955 XP_032755845;XP_032755846 ATP-binding cassette sub-family F member 3 protein-coding 625862285 LOC116889289 zinc finger protein 32-like X 98148316 98149474 + 116889289 MODEL JAAIVD010000014 pseudo 625862286 LOC116889490 U1 spliceosomal RNA X 23436951 23437097 - 116889490 MODEL JAAIVD010000014 pseudo 625862287 LOC116913843 GTP-binding nuclear protein Ran-like 12 48311954 48312651 - 116913843 MODEL JAAIVD010000007 pseudo 625862288 Gpr32 G protein-coupled receptor 32 ASSOCIATED WITH autism spectrum disorder (ortholog) 2 155260098 155261130 + 30032202 116893328 MODEL JAAIVD010000001;XM_032895145 XP_032751036 probable G-protein coupled receptor 32 protein-coding 625862291 Zdhhc6 zDHHC palmitoyltransferase 6 ENCODES a protein that exhibits palmitoyltransferase activity (ortholog); protein-cysteine S-stearoyltransferase activity (ortholog); INVOLVED IN intracellular signal transduction (ortholog); protein palmitoylation (ortholog); FOUND IN endoplasmic reticulum (ortholog) 2 60844338 60863496 + 22301074;30032202 116891343 MODEL JAAIVD010000001;XM_032892332;XM_032892333;XM_032892334;XM_032892335 XP_032748223;XP_032748224;XP_032748225;XP_032748226 palmitoyltransferase ZDHHC6;zinc finger DHHC-type palmitoyltransferase 6 protein-coding 625862317 LOC116912934 U7 small nuclear RNA 11 61660366 61660427 - 116912934 MODEL JAAIVD010000006;XR_004389504 snrna 625862320 LOC116906103 inorganic pyrophosphatase 2, mitochondrial-like 7 75544107 75599936 - 116906103 MODEL JAAIVD010000026 pseudo 625862321 Sclt1 sodium channel and clathrin linker 1 ENCODES a protein that exhibits clathrin binding (ortholog); sodium channel regulator activity (ortholog); INVOLVED IN cilium assembly (ortholog); clustering of voltage-gated sodium channels (ortholog); ASSOCIATED WITH astigmatism (ortholog); autosomal recessive polycystic kidney disease (ortholog); Bardet-Biedl syndrome (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 3 112199004 112332174 + 30032202 116896902 MODEL JAAIVD010000012;XM_032898450;XM_032898451;XM_032898452;XM_032898453 XP_032754341;XP_032754342;XP_032754343;XP_032754344 protein-coding 625862354 Papln papilin, proteoglycan like sulfated glycoprotein FOUND IN basement membrane (ortholog) 7 97856330 97887002 + 22301074;30032202 116906154 MODEL JAAIVD010000026;XM_032909135 XP_032765026 papilin protein-coding 625862384 LOC116887755 U6 spliceosomal RNA 18 1069049 1069155 - 116887755 MODEL JAAIVD010000013;XR_004386255 snrna 625862387 Slc27a4 solute carrier family 27 member 4 ENCODES a protein that exhibits long-chain fatty acid transmembrane transporter activity (ortholog); long-chain fatty acid-CoA ligase activity (ortholog); oleoyl-CoA ligase activity (ortholog); INVOLVED IN fatty acid metabolic process (ortholog); fatty acid transport (ortholog); glucose import in response to insulin stimulus (ortholog); ASSOCIATED WITH autosomal recessive congenital ichthyosis (ortholog); genetic disease (ortholog); Ichthyosis Prematurity Syndrome (ortholog); FOUND IN brush border membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 5 6918882 6931706 - 30032202 116901213 MODEL JAAIVD010000023;XM_032902929 XP_032758820 long-chain fatty acid transport protein 4 protein-coding 625862404 Pparg peroxisome proliferator activated receptor gamma ENCODES a protein that exhibits alpha-actinin binding (ortholog); arachidonate binding (ortholog); chromatin binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); beige fat cell differentiation (ortholog); BMP signaling pathway (ortholog); PARTICIPATES IN DNA modification pathway; Wnt signaling, non-canonical pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome (ortholog); acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 6 31222604 31347537 - 22301074;30032202 116903385 MODEL JAAIVD010000024;XM_032905878;XM_032905879;XM_032905881;XM_032905882 XP_032761769;XP_032761770;XP_032761772;XP_032761773 peroxisome proliferator-activated receptor gamma protein-coding 625862424 LOC116885114 U1 spliceosomal RNA 15 47628577 47628730 + 116885114 MODEL JAAIVD010000010 pseudo 625862425 LOC116902469 U6 spliceosomal RNA 5 122732299 122732402 - 116902469 MODEL JAAIVD010000023;XR_004388087 snrna 625862428 Snta1 syntrophin alpha 1 ENCODES a protein that exhibits ATPase binding (ortholog); dystroglycan binding (ortholog); nitric-oxide synthase binding (ortholog); INVOLVED IN neuromuscular junction development (ortholog); regulation of heart rate (ortholog); regulation of sodium ion transmembrane transport (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH atrial fibrillation (ortholog); Becker muscular dystrophy (ortholog); Brugada syndrome (ortholog); FOUND IN neuromuscular junction (ortholog); postsynaptic membrane (ortholog); protein-containing complex (ortholog) 5 133739884 133770294 - 22301074;30032202 116902157 MODEL JAAIVD010000023;XM_032904492;XM_032904493 XP_032760383;XP_032760384 alpha-1-syntrophin protein-coding 625862442 Sinhcaf SIN3-HDAC complex associated factor INVOLVED IN negative regulation of cell differentiation (ortholog); negative regulation of cell migration (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH pancreatic cancer (ortholog); FOUND IN Sin3-type complex (ortholog) 6 6563468 6588201 - 30032202 116903113 MODEL JAAIVD010000024;XM_032905446;XM_032905447 XP_032761337;XP_032761338 SIN3-HDAC complex-associated factor protein-coding 625862455 Baiap2l1 BAR/IMD domain containing adaptor protein 2 like 1 ENCODES a protein that exhibits proline-rich region binding (ortholog); INVOLVED IN positive regulation of actin filament polymerization (ortholog); regulation of actin cytoskeleton organization (ortholog); ASSOCIATED WITH rheumatoid arthritis (ortholog); FOUND IN actin cytoskeleton (ortholog); cytosol (ortholog); plasma membrane (ortholog) 16 8829780 8918469 + 22301074;30032202 116885219 MODEL JAAIVD010000004;XM_032886455;XM_032886456 XP_032742346;XP_032742347 brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 protein-coding 625862478 Trpm6 transient receptor potential cation channel subfamily M member 6 ENCODES a protein that exhibits calcium ion transmembrane transporter activity (ortholog); magnesium ion transmembrane transporter activity (ortholog); monoatomic cation channel activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); magnesium ion transmembrane transport (ortholog); metal ion transport (ortholog); ASSOCIATED WITH cone-rod dystrophy (ortholog); Eye Abnormalities (ortholog); genetic disease (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); nucleus (ortholog) 2 18760619 18901122 + 22301074;30032202 116891019 MODEL JAAIVD010000001;XM_032891699 XP_032747590 protein-coding 625862521 LOC116898480 histone H3.3-like 4 116470507 116470917 - 22301074;30032202 116898480 MODEL JAAIVD010000003;XM_032899727 XP_032755618 protein-coding 625862524 LOC116889105 solute carrier family 25 member 39-like X 1248889 1250030 - 116889105 MODEL JAAIVD010000014 pseudo 625862525 Nup188 nucleoporin 188 INVOLVED IN protein import into nucleus (ortholog); ASSOCIATED WITH genetic disease (ortholog); microcephaly (ortholog); respiratory failure (ortholog); FOUND IN nuclear envelope (ortholog) 5 5287533 5344279 - 22301074;30032202 116901186 MODEL JAAIVD010000023;XM_032902870 XP_032758761 nucleoporin NUP188 homolog protein-coding 625862573 Ngb neuroglobin ENCODES a protein that exhibits GDP-dissociation inhibitor activity (ortholog); nitrite reductase activity (ortholog); oxygen binding (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); cellular response to hypoxia (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Brain Injuries (ortholog); encephalitis (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); perikaryon (ortholog) 7 101198563 101203698 - 22301074 116905316 MODEL JAAIVD010000026;XM_032908205 XP_032764096 protein-coding 625862581 Mtdh metadherin ENCODES a protein that exhibits double-stranded RNA binding (ortholog); NF-kappaB binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN bicellular tight junction assembly (ortholog); lipopolysaccharide-mediated signaling pathway (ortholog); mRNA catabolic process (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Colorectal Neoplasms (ortholog); hepatocellular carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); bicellular tight junction (ortholog); cytoplasm (ortholog) 1 207824863 207883150 + 22301074;30032202 116910419 MODEL JAAIVD010000025;XM_032914266;XM_032914272;XM_032914278;XM_032914285;XM_032914293;XM_032914299;XM_032914309 XP_032770157;XP_032770163;XP_032770169;XP_032770176;XP_032770184;XP_032770190;XP_032770200 protein LYRIC protein-coding 625862604 Fam110a family with sequence similarity 110 member A INVOLVED IN mitotic spindle organization (ortholog); FOUND IN cell cortex (ortholog); centrosome (ortholog); cytosol (ortholog) 5 131334018 131344884 - 116902111 MODEL JAAIVD010000023;XM_032904422;XM_032904423 XP_032760313;XP_032760314 protein FAM110A protein-coding 625862613 LOC116893918 ATP-binding cassette sub-family A member 3-like 2 81299185 81390960 - 22301074;30032202 116893918 MODEL JAAIVD010000001;XM_032895640 XP_032751531 protein-coding 625862648 LOC116903435 poly [ADP-ribose] polymerase 1-like 6 37552322 37556090 - 22301074 116903435 MODEL JAAIVD010000024;XM_032905988 XP_032761879 protein-coding 625862653 Tmco2 transmembrane and coiled-coil domains 2 1 35911633 35916235 + 30032202 116897205 MODEL JAAIVD010000025;XM_032898916 XP_032754807 transmembrane and coiled-coil domain-containing protein 2 protein-coding 625862659 LOC116888646 collagen alpha-5(IV) chain-like X 91703619 92464155 - 22301074;30032202 116888646 MODEL JAAIVD010000014;XM_032889937 XP_032745828 protein-coding 625862716 Vwc2 von Willebrand factor C domain containing 2 INVOLVED IN negative regulation of BMP signaling pathway (ortholog); neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); positive regulation of cell-substrate adhesion (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); basement membrane (ortholog); extracellular matrix (ortholog) 11 80096521 80218281 + 22301074;30032202 116912334 MODEL JAAIVD010000006;XM_032916379 XP_032772270 brorin protein-coding 625862724 Lysmd2 LysM domain containing 2 ASSOCIATED WITH COVID-19 (ortholog) 8 69905363 69920430 + 116907413 MODEL JAAIVD010000027;XM_032910374;XM_032910375 XP_032766265;XP_032766266 lysM and putative peptidoglycan-binding domain-containing protein 2 protein-coding 625862734 LOC116903459 E3 ubiquitin-protein ligase PDZRN3 6 45856447 45903810 + 22301074;30032202 116903459 MODEL JAAIVD010000024;XM_032906013 XP_032761904 protein-coding 625862746 LOC116893582 ETS translocation variant 5-like 2 228901133 228913172 - 116893582 MODEL JAAIVD010000001 pseudo 625862747 Hlf HLF transcription factor, PAR bZIP family member ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); skeletal muscle cell differentiation (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); prostate cancer (ortholog); stomach cancer (ortholog); FOUND IN nucleoplasm (ortholog) 9 80428729 80485116 + 30032202 116908763 MODEL JAAIVD010000002;XM_032912115;XM_032912116 XP_032768006;XP_032768007 hepatic leukemia factor protein-coding 625862757 LOC116897942 olfactory receptor 5AC1-like 4 43000736 43001656 - 22301074;30032202 116897942 MODEL JAAIVD010000003;XM_032899342 XP_032755233 protein-coding 625862760 Klf3 KLF transcription factor 3 ENCODES a protein that exhibits RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cellular response to endothelin (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleoplasm (ortholog) 11 21822611 21853060 + 30032202 116912085 MODEL JAAIVD010000006;XM_032915967;XM_032915968 XP_032771858;XP_032771859 Krueppel-like factor 3;Kruppel like factor 3 protein-coding 625862773 LOC116891333 uncharacterized LOC116891333 2 59561329 59565576 - 116891333 MODEL JAAIVD010000001;XR_004386830 ncrna 625862777 LOC116888964 peptidyl-prolyl cis-trans isomerase A-like X 7067030 7067518 - 116888964 MODEL JAAIVD010000014 pseudo 625862778 Tnfsf10 TNF superfamily member 10 ENCODES a protein that exhibits cytokine activity (ortholog); identical protein binding (ortholog); TRAIL binding (ortholog); INVOLVED IN male gonad development (ortholog); positive regulation of apoptotic process (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN Trail mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); arteriosclerosis (ortholog); Brain Injuries (ortholog); FOUND IN extracellular region (ortholog) 3 127369263 127385999 - 22301074;30032202 116896991 MODEL JAAIVD010000012;XM_032898584 XP_032754475 tumor necrosis factor ligand superfamily member 10 protein-coding 625862787 LOC116894337 L-lactate dehydrogenase C chain 2 152494027 152510528 - 22301074 116894337 MODEL JAAIVD010000001;XM_032896030;XM_032896031;XM_032896032;XM_032896033 XP_032751921;XP_032751922;XP_032751923;XP_032751924 protein-coding 625862806 LOC116894106 olfactory receptor 52D1-like 2 103559821 103560807 + 22301074 116894106 MODEL JAAIVD010000001;XM_032895825 XP_032751716 protein-coding 625862810 LOC116902844 39S ribosomal protein L17, mitochondrial-like 6 92656193 92656879 - 22301074;30032202 116902844 MODEL JAAIVD010000024;XM_032905174 XP_032761065 protein-coding 625862814 LOC116895901 serine hydroxymethyltransferase, mitochondrial-like 3 120250002 120251297 + 116895901 MODEL JAAIVD010000012 pseudo 625862815 LOC116909327 asialoglycoprotein receptor 2-like 9 49707303 49719383 + 30032202 116909327 MODEL JAAIVD010000002;XM_032912867 XP_032768758 protein-coding 625862826 LOC116903910 uncharacterized LOC116903910 6 98959943 98971125 - 116903910 MODEL JAAIVD010000024;XR_004388310 ncrna 625862832 LOC116914023 WW domain-binding protein 11-like 12 81148960 81150672 + 116914023 MODEL JAAIVD010000007 pseudo 625862833 Arpc2 actin related protein 2/3 complex subunit 2 ENCODES a protein that exhibits actin filament binding (ortholog); AP-1 adaptor complex binding (ortholog); Arp2/3 complex binding (ortholog); INVOLVED IN Arp2/3 complex-mediated actin nucleation (ortholog); cellular response to epidermal growth factor stimulus (ortholog); cellular response to hydrogen peroxide (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; Rab family mediated signaling pathway; ASSOCIATED WITH colorectal adenocarcinoma (ortholog); invasive ductal carcinoma (ortholog); melanoma (ortholog); FOUND IN actin filament branch point (ortholog); apical dendrite (ortholog); Arp2/3 protein complex (ortholog) 4 147690454 147720652 + 22301074;30032202 116899494 MODEL JAAIVD010000003;XM_032901326;XM_032901327;XM_032901329 XP_032757217;XP_032757218;XP_032757220 actin-related protein 2/3 complex subunit 2 protein-coding 625862853 LOC116900355 olfactory receptor 5W2-like 5 69236961 69237899 - 22301074;30032202 116900355 MODEL JAAIVD010000023;XM_032902109 XP_032758000 protein-coding 625862856 Bglap bone gamma-carboxyglutamate protein ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); hormone activity (ortholog); INVOLVED IN bone development (ortholog); brain development (ortholog); cellular response to BMP stimulus (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH asthma (ortholog); autosomal dominant hypocalcemia (ortholog); Bone Fractures (ortholog); FOUND IN cell projection (ortholog); cytoplasm (ortholog); dendrite (ortholog) 3 65181043 65181965 + 22301074;30032202 116896690 MODEL JAAIVD010000012;XM_032898082 XP_032753973 osteocalcin protein-coding 625862864 Slco1c1 solute carrier organic anion transporter family member 1C1 ENCODES a protein that exhibits bile acid transmembrane transporter activity (ortholog); thyroid hormone transmembrane transporter activity (ortholog); transmembrane transporter activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); positive regulation of thyroid hormone generation (ortholog); thyroid hormone transport (ortholog); PARTICIPATES IN multispecific organic anion transporter mediated transport pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); primary biliary cholangitis (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) 6 8008086 8054010 - 22301074;30032202 116903126 MODEL JAAIVD010000024;XM_032905478;XM_032905479 XP_032761369;XP_032761370 protein-coding 625862885 Itpr3 inositol 1,4,5-trisphosphate receptor type 3 ENCODES a protein that exhibits ATP binding (ortholog); calcium ion binding (ortholog); identical protein binding (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); calcium ion transport (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH acrodermatitis (ortholog); Animal Disease Models (ortholog); autism spectrum disorder (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); brush border (ortholog) 18 6688666 6753405 - 22301074 116886886 MODEL JAAIVD010000013;XM_032888344 XP_032744235 protein-coding 625862947 LOC116910345 translation machinery-associated protein 7-like 9 68042356 68042844 + 116910345 MODEL JAAIVD010000002 pseudo 625862948 LOC116911624 40S ribosomal protein S3a-like 10 30929687 30933319 + 116911624 MODEL JAAIVD010000005 pseudo 625862949 Arhgap23 Rho GTPase activating protein 23 ASSOCIATED WITH COVID-19 (ortholog); polycystic ovary syndrome (ortholog) 9 56883139 56937075 - 22301074 116908587 MODEL JAAIVD010000002;XM_032911803 XP_032767694 rho GTPase-activating protein 23 protein-coding 625862974 Krtap29-1 keratin associated like protein 29-1 9 54717282 54718304 - 116909042 MODEL JAAIVD010000002;XM_032912523 XP_032768414 keratin-associated protein 29-1 protein-coding 625862977 LOC116913193 T-cell receptor alpha chain V region 2B4-like 12 65714911 65715857 - 116913193 MODEL JAAIVD010000007;XR_004389600 pseudo 625862981 LOC116884362 60S acidic ribosomal protein P0-like 15 39279961 39280701 - 116884362 MODEL JAAIVD010000010 pseudo 625862982 Rev1 REV1 DNA directed polymerase ENCODES a protein that exhibits deoxycytidyl transferase activity (ortholog); DNA binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN DNA biosynthetic process (ortholog); DNA repair (ortholog); error-prone translesion synthesis (ortholog); FOUND IN nuclear replication fork (ortholog); nucleolus (ortholog); nucleus (ortholog) 4 114241228 114313530 - 22301074;30032202 116899309 MODEL JAAIVD010000003;XM_032900969;XM_032900970;XM_032900971;XM_032900972;XM_032900973;XM_032900974 XP_032756860;XP_032756861;XP_032756862;XP_032756863;XP_032756864;XP_032756865 DNA repair protein REV1 protein-coding 625863023 Agtpbp1 ATP/GTP binding carboxypeptidase 1 ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); tubulin binding (ortholog); INVOLVED IN adult walking behavior (ortholog); anterograde axonal transport of mitochondrion (ortholog); axonal transport (ortholog); ASSOCIATED WITH Childhood-Onset Neurodegeneration with Cerebellar Atrophy (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 14 78580921 78699019 + 22301074;30032202 116883757 MODEL JAAIVD010000009;XM_032885002;XM_032885003;XM_032885004;XM_032885005 XP_032740893;XP_032740894;XP_032740895;XP_032740896 ATP/GTP binding protein 1;cytosolic carboxypeptidase 1 protein-coding 625863068 LOC116885607 ribosomal L1 domain-containing protein 1-like 1 214808593 214809436 + 116885607 MODEL JAAIVD010000025 pseudo 625863069 Tns2 tensin 2 ENCODES a protein that exhibits identical protein binding (ortholog); kinase binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN cellular homeostasis (ortholog); collagen metabolic process (ortholog); kidney development (ortholog); ASSOCIATED WITH nephrotic syndrome (ortholog); Pierson syndrome (ortholog); FOUND IN focal adhesion (ortholog) 1 260957940 260972013 - 22301074;30032202 116883626 MODEL JAAIVD010000025;XM_032884818 XP_032740709 tensin-2 protein-coding 625863102 LOC116900399 olfactory receptor 4P4-like 5 70025807 70026749 - 22301074 116900399 MODEL JAAIVD010000023;XM_032902146 XP_032758037 protein-coding 625863106 Rpl18a ribosomal protein L18a ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); response to antineoplastic agent (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH alcohol use disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog) 13 13139771 13140727 - 22301074;30032202;7654221 116914794 MODEL JAAIVD010000008;X14181;XM_032919241 CAA32385;XP_032775132 60S ribosomal protein L18a protein-coding 625863114 LOC116903841 amiloride-sensitive amine oxidase [copper-containing] 6 92095749 92102157 - 22301074;30032202 116903841 MODEL JAAIVD010000024;XM_032906557;XM_032906559;XM_032906560 XP_032762448;XP_032762450;XP_032762451 protein-coding 625863130 LOC116897369 polycomb group RING finger protein 6-like 1 37174550 37175363 + 116897369 MODEL JAAIVD010000025 pseudo 625863131 LOC116908239 aldose reductase-related protein 2-like 8 84364651 84432390 + 116908239 MODEL JAAIVD010000027 pseudo 625863132 Colq collagen like tail subunit of asymmetric acetylcholinesterase ENCODES a protein that exhibits heparin binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN establishment of protein localization to membrane (ortholog); negative regulation of synaptic transmission, cholinergic (ortholog); protein localization to synapse (ortholog); ASSOCIATED WITH congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 5 (ortholog); genetic disease (ortholog); FOUND IN neuromuscular junction (ortholog) 13 7247179 7283609 - 30032202 116914487 MODEL JAAIVD010000008;XM_032918799 XP_032774690 acetylcholinesterase collagenic tail peptide protein-coding 625863152 Eif1ax eukaryotic translation initiation factor 1A X-linked INVOLVED IN ribosome assembly (ortholog); translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH multiple myeloma (ortholog); Neoplasm Metastasis (ortholog); FOUND IN eukaryotic 43S preinitiation complex (ortholog); eukaryotic 48S preinitiation complex (ortholog); multi-eIF complex (ortholog) X 33870231 33884852 - 22301074;30032202 116887822 MODEL JAAIVD010000014;XM_032889341 XP_032745232 eukaryotic translation initiation factor 1A, X-chromosomal protein-coding 625863161 Ccdc127 coiled-coil domain containing 127 INVOLVED IN lipid homeostasis (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 2 203777827 203784340 + 116892917 MODEL JAAIVD010000001;XM_032894844 XP_032750735 coiled-coil domain-containing protein 127 protein-coding 625863168 Nsun3 NOP2/Sun RNA methyltransferase 3 ENCODES a protein that exhibits tRNA (cytidine-N5)-methyltransferase activity (ortholog); INVOLVED IN regulation of mitochondrial translation (ortholog); tRNA wobble base cytosine methylation (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 48 (ortholog); genetic disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 4 46397618 46458814 - 22301074;30032202 116898927 MODEL JAAIVD010000003;XM_032900335 XP_032756226 tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial protein-coding 625863178 Col11a1 collagen type XI alpha 1 chain ENCODES a protein that exhibits heparan sulfate binding (ortholog); heparin binding (ortholog); INVOLVED IN cartilage condensation (ortholog); cartilage development (ortholog); chondrocyte development (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); angle-closure glaucoma (ortholog); autistic disorder (ortholog); FOUND IN collagen trimer (ortholog); collagen type XI trimer (ortholog); endoplasmic reticulum (ortholog) 3 45375548 45565416 - 22301074;30032202 116896343 MODEL JAAIVD010000012;XM_032897445 XP_032753336 collagen alpha-1(XI) chain protein-coding 625863249 Fa2h fatty acid 2-hydroxylase ENCODES a protein that exhibits 4-hydroxysphinganine ceramide fatty acyl 2-hydroxylase activity (ortholog); fatty acid 2-hydroxylase activity (ortholog); free fatty acid 2-hydroxylase activity (ortholog); INVOLVED IN central nervous system myelin maintenance (ortholog); ceramide biosynthetic process (ortholog); establishment of skin barrier (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary spastic paraplegia (ortholog); hereditary spastic paraplegia 35 (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog) 17 31043207 31093673 - 22301074;30032202 116886328 MODEL JAAIVD010000011;XM_032887777 XP_032743668 protein-coding 625863260 Tmem176b transmembrane protein 176B INVOLVED IN negative regulation of dendritic cell differentiation (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog) 6 92151874 92159696 + 22301074;30032202 116903842 MODEL JAAIVD010000024;XM_032906561;XM_032906562;XM_032906563;XM_032906564;XM_032906565;XM_032906566;XM_032906567;XM_032906568;XM_032906569 XP_032762452;XP_032762453;XP_032762454;XP_032762455;XP_032762456;XP_032762457;XP_032762458;XP_032762459;XP_032762460 protein-coding 625863297 Bmp15 bone morphogenetic protein 15 INVOLVED IN ovarian cumulus expansion (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH amenorrhea (ortholog); genetic disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cytoplasm (ortholog) X 16445005 16449830 + 22301074;30032202 116889341 MODEL JAAIVD010000014;XM_032890456 XP_032746347 protein-coding 625863301 Trnar-ucg transfer RNA arginine (anticodon UCG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 68687246 68687318 - 116910785 MODEL JAAIVD010000002 trna 625863302 Hyi hydroxypyruvate isomerase (putative) 1 38663761 38666369 - 30032202 116897831 MODEL JAAIVD010000025;XM_032899251 XP_032755142 putative hydroxypyruvate isomerase protein-coding 625863314 LOC116898136 60S ribosomal protein L7a-like 4 112246122 112246924 - 116898136 MODEL JAAIVD010000003 pseudo 625863315 LOC116892000 vomeronasal type-2 receptor 116-like 2 134741131 134748510 + 22301074;30032202 116892000 MODEL JAAIVD010000001;XM_032893454;XM_032893455;XM_032893456 XP_032749345;XP_032749346;XP_032749347 protein-coding 625863329 Tmem68 transmembrane protein 68 ENCODES a protein that exhibits phospholipid:diacylglycerol acyltransferase activity (ortholog); INVOLVED IN triglyceride biosynthetic process (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 7 73191609 73210191 + 22301074;30032202 116905091 MODEL JAAIVD010000026;XM_032907815 XP_032763706 protein-coding 625863339 LOC116887571 uncharacterized LOC116887571 18 4344057 4356158 + 116887571 MODEL JAAIVD010000013 pseudo 625863340 Mlxip MLX interacting protein ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN nucleocytoplasmic transport (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Coronary Disease (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 16 30394532 30452883 - 22301074;30032202 116885195 MODEL JAAIVD010000004;XM_032886415 XP_032742306 MLX-interacting protein protein-coding 625863361 LOC116887771 U7 small nuclear RNA 18 24085123 24085183 + 116887771 MODEL JAAIVD010000013;XR_004386268 snrna 625863364 LOC116906627 28S ribosomal protein S16, mitochondrial-like 8 56595411 56595836 - 116906627 MODEL JAAIVD010000027 pseudo 625863365 Bicdl2 BICD family like cargo adaptor 2 ENCODES a protein that exhibits small GTPase binding (ortholog) 9 967171 975519 + 30032202 116908951 MODEL JAAIVD010000002;XM_032912411 XP_032768302 BICD family-like cargo adapter 2 protein-coding 625863379 LOC116910699 small nucleolar RNA SNORA48 9 52583422 52583561 - 116910699 MODEL JAAIVD010000002;XR_004389227 snorna 625863382 LOC116884932 ADP/ATP translocase 2-like 15 16969829 16970663 + 116884932 MODEL JAAIVD010000010 pseudo 625863383 LOC116887842 F-box-like/WD repeat-containing protein TBL1X X 39876687 39879500 + 22301074;30032202 116887842 MODEL JAAIVD010000014;XM_032889351 XP_032745242 protein-coding 625863390 Ints9 integrator complex subunit 9 INVOLVED IN negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); regulation of transcription elongation by RNA polymerase II (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); INTAC complex (ortholog) 12 59375718 59460661 - 30032202 116913956 MODEL JAAIVD010000007;XM_032918222 XP_032774113 protein-coding 625863411 LOC116893630 ubiquitin-60S ribosomal protein L40-like 2 9084645 9085043 - 22301074;30032202 116893630 MODEL JAAIVD010000001;XM_032895343 XP_032751234 protein-coding 625863415 LOC116893306 nocturnin-like 2 151558573 151561076 + 30032202 116893306 MODEL JAAIVD010000001;XM_032895132 XP_032751023 protein-coding 625863420 LOC116913280 glyceraldehyde-3-phosphate dehydrogenase-like 12 87192359 87201344 - 116913280 MODEL JAAIVD010000007 pseudo 625863421 LOC116908154 cytochrome b-c1 complex subunit 7-like 1 170241352 170242116 - 116908154 MODEL JAAIVD010000025 pseudo 625863422 Batf basic leucine zipper ATF-like transcription factor ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN defense response to protozoan (ortholog); DNA damage response (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 7 99802463 99825170 + 22301074;30032202 116905818 MODEL JAAIVD010000026;XM_032908785 XP_032764676 basic leucine zipper transcriptional factor ATF-like protein-coding 625863429 LOC116886598 ATP-dependent RNA helicase DDX3X-like 17 8217070 8217862 - 116886598 MODEL JAAIVD010000011 pseudo 625863430 Hand1 heart and neural crest derivatives expressed 1 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN angiogenesis (ortholog); blastocyst development (ortholog); cardiac left ventricle formation (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); hypoplastic left heart syndrome (ortholog); Poisoning (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 9 40401962 40404527 + 22301074;30032202 116909797 MODEL JAAIVD010000002;XM_032913491 XP_032769382 heart- and neural crest derivatives-expressed protein 1 protein-coding 625863436 Hip1r huntingtin interacting protein 1 related ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); clathrin binding (ortholog); INVOLVED IN clathrin coat assembly (ortholog); digestive system development (ortholog); intrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); FOUND IN apical plasma membrane (ortholog); cell cortex (ortholog); clathrin-coated pit (ortholog) 16 29857819 29886180 - 30032202 116885957 MODEL JAAIVD010000004;XM_032887273;XM_032887274 XP_032743164;XP_032743165 huntingtin-interacting protein 1-related protein protein-coding 625863476 Pth parathyroid hormone ENCODES a protein that exhibits hormone activity (ortholog); parathyroid hormone receptor binding (ortholog); peptide hormone receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); bone mineralization (ortholog); calcium ion homeostasis (ortholog); PARTICIPATES IN parathyroid hormone signaling pathway; ASSOCIATED WITH Albuminuria (ortholog); anemia (ortholog); Animal Disease Models (ortholog); FOUND IN extracellular region (ortholog) 2 88133074 88136091 + 22301074;30032202 116893939 MODEL JAAIVD010000001;XM_032895658 XP_032751549 protein-coding 625863483 LOC116903728 prohibitin-like 6 12222289 12225045 + 116903728 MODEL JAAIVD010000024 pseudo 625863484 Zc3hav1l ZC3HAV1 like FOUND IN cytosol (ortholog) 6 101528335 101535152 + 22301074 116903952 MODEL JAAIVD010000024;XM_032906738 XP_032762629 zinc finger CCCH-type antiviral protein 1-like;zinc finger CCCH-type containing, antiviral 1 like protein-coding 625863492 LOC116906236 uncharacterized LOC116906236 1 156016663 156018839 - 116906236 MODEL JAAIVD010000025;XR_004388588 ncrna 625863497 LOC116894504 zinc finger protein 541-like 2 172981039 172990671 - 30032202 116894504 MODEL JAAIVD010000001;XM_032896208 XP_032752099 protein-coding 625863510 Drd4 dopamine receptor D4 ENCODES a protein that exhibits dopamine binding (ortholog); dopamine neurotransmitter receptor activity (ortholog); dopamine neurotransmitter receptor activity, coupled via Gi/Go (ortholog); INVOLVED IN adenylate cyclase-inhibiting dopamine receptor signaling pathway (ortholog); adult locomotory behavior (ortholog); arachidonate secretion (ortholog); PARTICIPATES IN dopamine signaling pathway; dopamine signaling pathway via D2 family of receptors; excitatory synaptic transmission pathway; ASSOCIATED WITH alcohol use disorder (ortholog); alcohol withdrawal syndrome (ortholog); Alzheimer's disease (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cell cortex (ortholog) 2 8183864 8187103 - 22301074;30032202 116893620 MODEL JAAIVD010000001;XM_032895333;XM_032895334 XP_032751224;XP_032751225 D(4) dopamine receptor protein-coding 625863522 LOC116884798 cytochrome P450 4A12 15 71628565 71662914 + 22301074;30032202 116884798 MODEL JAAIVD010000010;XM_032886032;XM_032886033;XM_032886034 XP_032741923;XP_032741924;XP_032741925 protein-coding 625863545 LOC116887618 von Hippel-Lindau disease tumor suppressor-like 18 10123407 10124081 - 116887618 MODEL JAAIVD010000013;XM_032889224 XP_032745115 protein-coding 625863548 Mst1 macrophage stimulating 1 ENCODES a protein that exhibits enzyme binding (ortholog); histone kinase activity (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); cellular response to type II interferon (ortholog); embryo implantation (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Chemical and Drug Induced Liver Injury (ortholog); Crohn's disease (ortholog); FOUND IN extracellular region (ortholog); vacuole (ortholog) 8 99409868 99414439 + 22301074;30032202 116907181 MODEL JAAIVD010000027;XM_032910140;XM_032910141 XP_032766031;XP_032766032 hepatocyte growth factor-like protein protein-coding 625863575 Clrn3 clarin 3 2 66392359 66408548 + 116891380 MODEL JAAIVD010000001;XM_032892394 XP_032748285 clarin-3 protein-coding 625863582 Nhsl3 NHS like 3 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cell junction (ortholog); plasma membrane (ortholog) 1 28893765 28922993 + 30032202 116896204 MODEL JAAIVD010000025;XM_032897256;XM_032897265;XM_032897273 XP_032753147;XP_032753156;XP_032753164 Kiaa1522 uncharacterized protein KIAA1522 homolog protein-coding 625863599 LOC116896073 elongation factor 1-delta-like 3 210686440 210686888 + 116896073 MODEL JAAIVD010000012 pseudo 625863600 Galk1 galactokinase 1 ENCODES a protein that exhibits ATP binding (ortholog); galactokinase activity (ortholog); galactose binding (ortholog); INVOLVED IN carbohydrate phosphorylation (ortholog); galactitol metabolic process (ortholog); galactose catabolic process via UDP-galactose, Leloir pathway (ortholog); PARTICIPATES IN galactokinase deficiency pathway; galactose metabolic pathway; galactosemia pathway; ASSOCIATED WITH cataract (ortholog); COVID-19 (ortholog); galactokinase deficiency (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog) 9 68047335 68051514 + 22301074;30032202 116908738 MODEL JAAIVD010000002;XM_032912085 XP_032767976 galactokinase protein-coding 625863612 LOC116884785 aminomethyltransferase, mitochondrial-like 15 78588099 78589300 + 116884785 MODEL JAAIVD010000010 pseudo 625863613 Kif27 kinesin family member 27 INVOLVED IN cilium assembly (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ventricular system development (ortholog); ASSOCIATED WITH hydrocephalus (ortholog); FOUND IN cilium (ortholog) 14 79768763 79842418 + 22301074;30032202 116883760 MODEL JAAIVD010000009;XM_032885006 XP_032740897 kinesin-like protein KIF27 protein-coding 625863636 Rel REL proto-oncogene, NF-kB subunit ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of gene expression (ortholog); negative regulation of interferon-beta production (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN nuclear factor kappa B signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); atrophic gastritis (ortholog); breast cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 11 93202509 93228653 + 22301074;30032202 116912832 MODEL JAAIVD010000006;XM_032917019 XP_032772910 proto-oncogene c-Rel protein-coding 625863650 LOC116895556 eukaryotic translation initiation factor 4E-like 3 124940792 124941576 - 116895556 MODEL JAAIVD010000012 pseudo 625863651 LOC116898963 60S ribosomal protein L11-like 4 50132085 50132707 - 116898963 MODEL JAAIVD010000003 pseudo 625863652 LOC116894181 olfactory receptor 481-like 2 105950369 105951310 - 22301074;30032202 116894181 MODEL JAAIVD010000001;XM_032895898 XP_032751789 protein-coding 625863656 Tcl1a TCL1 family AKT coactivator A ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase binding (ortholog); protein serine/threonine kinase activator activity (ortholog); INVOLVED IN activation of protein kinase B activity (ortholog); intracellular signal transduction (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Mycoplasma pneumoniae pneumonia (ortholog); T-cell acute lymphoblastic leukemia (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); nucleoplasm (ortholog) 7 122886168 122892171 - 22301074;30032202 116905984 MODEL JAAIVD010000026;XM_032909007 XP_032764898 T cell leukemia/lymphoma 1A;T-cell leukemia/lymphoma protein 1A protein-coding 625863664 LOC116908361 small nucleolar RNA SNORA28 8 20238764 20238889 + 116908361 MODEL JAAIVD010000027;XR_004388911 snorna 625863667 Ndor1 NADPH dependent diflavin oxidoreductase 1 ENCODES a protein that exhibits electron transfer activity (ortholog); FAD binding (ortholog); FMN binding (ortholog); INVOLVED IN electron transport chain (ortholog); PARTICIPATES IN cytosolic iron-sulfur cluster protein assembly pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog) 5 11926888 11934993 + 22301074;30032202 116901315 MODEL JAAIVD010000023;XM_032903126;XM_032903127;XR_004387976 XP_032759017;XP_032759018 NADPH-dependent diflavin oxidoreductase 1 protein-coding 625863692 Nacc2 NACC family member 2 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); histone deacetylase binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) 5 10963553 11029870 + 22301074;30032202 116901279 MODEL JAAIVD010000023;XM_032903051 XP_032758942 nucleus accumbens-associated protein 2 protein-coding 625863702 Ush2a usherin ENCODES a protein that exhibits collagen binding (ortholog); myosin binding (ortholog); INVOLVED IN hair cell differentiation (ortholog); inner ear receptor cell differentiation (ortholog); maintenance of animal organ identity (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; retinitis pigmentosa pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal dominant nonsyndromic deafness 36 (ortholog); Bardet-Biedl syndrome (ortholog); FOUND IN basement membrane (ortholog); cytoplasm (ortholog); neuronal cell body (ortholog) 10 66389009 67059300 + 22301074 116911492 MODEL JAAIVD010000005;XM_032915475 XP_032771366 protein-coding 625863777 LOC116913732 olfactory receptor 11H6-like 12 72855699 72858545 - 116913732 MODEL JAAIVD010000007 pseudo 625863778 Gpr20 G protein-coupled receptor 20 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); FOUND IN plasma membrane (ortholog); signaling receptor complex (ortholog) 1 246458263 246468368 - 22301074;30032202 116912453 MODEL JAAIVD010000025;XM_032916524 XP_032772415 G-protein coupled receptor 20 protein-coding 625863784 LOC116911482 cytochrome c, somatic-like 10 10965473 10966349 - 116911482 MODEL JAAIVD010000005;XR_004389327 pseudo 625863787 LOC116910667 small nucleolar RNA SNORA69 9 52352945 52353078 - 116910667 MODEL JAAIVD010000002;XR_004389199 snorna 625863790 Capn12 calpain 12 2 167108955 167120174 - 22301074;30032202 116892368 MODEL JAAIVD010000001;XM_032894031 XP_032749922 calpain-12 protein-coding 625863815 Mpv17l2 MPV17 mitochondrial inner membrane protein like 2 ENCODES a protein that exhibits mitochondrial large ribosomal subunit binding (ortholog); INVOLVED IN mitochondrial ribosome assembly (ortholog); positive regulation of mitochondrial translation (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 13 12999339 13001717 - 22301074;30032202 116914422 MODEL JAAIVD010000008;XM_032918692 XP_032774583 mpv17-like protein 2 protein-coding 625863824 LOC116906378 small nucleolar RNA SNORD113/SNORD114 family 7 127262504 127262578 + 116906378 MODEL JAAIVD010000026;XR_004388648 snorna 625863827 Tmem186 transmembrane protein 186 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); FOUND IN mitochondrial complex I intermediate assembly complex (ortholog); mitochondrion (ortholog) 9 13397537 13402312 + 30032202 116910438 MODEL JAAIVD010000002;XM_032914284;XM_032914286 XP_032770175;XP_032770177 protein-coding 625863836 LOC116893563 ceramide-1-phosphate transfer protein-like 2 217162169 217165765 - 116893563 MODEL JAAIVD010000001 pseudo 625863837 Zkscan5 zinc finger with KRAB and SCAN domains 5 16 8073592 8092674 - 30032202 116885935 MODEL JAAIVD010000004;XM_032887246;XM_032887247 XP_032743137;XP_032743138 zinc finger protein with KRAB and SCAN domains 5 protein-coding 625863851 Agbl3 AGBL carboxypeptidase 3 ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); INVOLVED IN protein side chain deglutamylation (ortholog) 6 104797926 104874448 - 22301074 116903973 MODEL JAAIVD010000024;XM_032906774;XM_032906775;XM_032906776;XM_032906777;XM_032906778;XM_032906779;XM_032906780;XM_032906781;XR_004388315;XR_004388316 XP_032762665;XP_032762666;XP_032762667;XP_032762668;XP_032762669;XP_032762670;XP_032762671;XP_032762672 ATP/GTP binding protein like 3;cytosolic carboxypeptidase 3 protein-coding 625863897 LOC116893960 uncharacterized LOC116893960 2 97995408 97998110 + 116893960 MODEL JAAIVD010000001;XR_004387018 ncrna 625863902 LOC116891144 cytochrome P450 2C7 2 38934934 38988058 + 22301074;30032202 116891144 MODEL JAAIVD010000001;X12595;XM_032891892;XM_032891893 CAA31108;XP_032747783;XP_032747784 cytochrome P-450 protein-coding 625863919 Ak8 adenylate kinase 8 ENCODES a protein that exhibits AMP binding (ortholog); AMP kinase activity (ortholog); dCMP kinase activity (ortholog); INVOLVED IN ventricular system development (ortholog); ASSOCIATED WITH hydrocephalus (ortholog); FOUND IN 9+2 motile cilium (ortholog); axoneme (ortholog); sperm flagellum (ortholog) 5 7860187 7974429 - 22301074;30032202 116901227 MODEL JAAIVD010000023;XM_032902964 XP_032758855 protein-coding 625863936 LOC116904805 U6 spliceosomal RNA 6 67684176 67684282 - 116904805 MODEL JAAIVD010000024;XR_004388457 snrna 625863939 Cdc14a cell division cycle 14A INVOLVED IN sensory perception of sound (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness 32 (ortholog); Deafness (ortholog); genetic disease (ortholog); FOUND IN centrosome (ortholog); kinociliary basal body (ortholog); kinocilium (ortholog) 3 43278928 43431615 + 22301074;30032202 116896333 MODEL JAAIVD010000012;XM_032897431;XM_032897432;XM_032897433 XP_032753322;XP_032753323;XP_032753324 dual specificity protein phosphatase CDC14A protein-coding 625863967 LOC116890213 keratin, type II cuticular Hb1-like 1 261633209 261639505 - 30032202 116890213 MODEL JAAIVD010000025;XM_032890949 XP_032746840 protein-coding 625863976 Pias1 protein inhibitor of activated STAT 1 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); enzyme binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN DNA damage response (ortholog); fat cell differentiation (ortholog); G1/S transition of mitotic cell cycle (ortholog); PARTICIPATES IN aldosterone signaling pathway; ataxia telangiectasia-mutated (ATM) signaling pathway; Hedgehog signaling pathway; ASSOCIATED WITH Arsenic Poisoning (ortholog); Brain Injuries (ortholog); focal segmental glomerulosclerosis (ortholog); FOUND IN glutamatergic synapse (ortholog); nuclear periphery (ortholog); nucleoplasm (ortholog) 8 57171731 57268595 - 22301074;30032202 116908045 MODEL JAAIVD010000027;XM_032911319 XP_032767210 E3 SUMO-protein ligase PIAS1 protein-coding 625863994 Ska1 spindle and kinetochore associated complex subunit 1 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); establishment of meiotic spindle orientation (ortholog); metaphase chromosome alignment (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog); kinetochore (ortholog); meiotic spindle (ortholog) 15 57742036 57752298 + 22301074;30032202 116884510 MODEL JAAIVD010000010;XM_032885640 XP_032741531 spindle and kinetochore-associated protein 1 protein-coding 625864005 LOC116887770 glucose-induced degradation protein 8 homolog 1 57545174 57545861 + 116887770 MODEL JAAIVD010000025 pseudo 625864006 Ppp1r16b protein phosphatase 1 regulatory subunit 16B ENCODES a protein that exhibits protein phosphatase regulator activity (ortholog); INVOLVED IN establishment of endothelial barrier (ortholog); positive regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis (ortholog); positive regulation of endothelial cell proliferation (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog); perinuclear region of cytoplasm (ortholog) 5 138012203 138106806 + 22301074;30032202 116902241 MODEL JAAIVD010000023;XM_032904658;XM_032904659 XP_032760549;XP_032760550 protein phosphatase 1 regulatory inhibitor subunit 16B protein-coding 625864024 Afg3l2 AFG3 like matrix AAA peptidase subunit 2 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); metalloendopeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN axonogenesis (ortholog); calcium import into the mitochondrion (ortholog); cellular response to glutathione (ortholog); ASSOCIATED WITH autosomal dominant cerebellar ataxia (ortholog); dystonia (ortholog); fundus dystrophy (ortholog); FOUND IN m-AAA complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 15 63842239 63886299 + 22301074;30032202 116884994 MODEL JAAIVD010000010;XM_032886220 XP_032742111 AFG3-like protein 2 protein-coding 625864045 Cdk5r1 cyclin dependent kinase 5 regulatory subunit 1 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); cadherin binding (ortholog); INVOLVED IN axon guidance (ortholog); axonal fasciculation (ortholog); brain development (ortholog); PARTICIPATES IN Reelin signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); attention deficit hyperactivity disorder (ortholog); brain disease (ortholog); FOUND IN axon (ortholog); contractile muscle fiber (ortholog); cytoplasm (ortholog) 9 89933526 89937616 - 22301074;30032202 116909421 MODEL JAAIVD010000002;XM_032912996 XP_032768887 cyclin-dependent kinase 5 activator 1 protein-coding 625864051 Slc11a2 solute carrier family 11 member 2 ENCODES a protein that exhibits cadmium ion binding (ortholog); cadmium ion transmembrane transporter activity (ortholog); calcium ion transmembrane transporter activity (ortholog); INVOLVED IN cadmium ion transmembrane transport (ortholog); cellular response to hypoxia (ortholog); cellular response to iron ion (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; iron uptake pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); anemia (ortholog); brain ischemia (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); basal part of cell (ortholog) 1 262668273 262705975 + 22301074;30032202 116884041 MODEL JAAIVD010000025;XM_032885289 XP_032741180 natural resistance-associated macrophage protein 2 protein-coding 625864072 LOC116908683 ATP synthase subunit e, mitochondrial-like 9 93375602 93375816 + 116908683 MODEL JAAIVD010000002 pseudo 625864073 LOC116884412 60S ribosomal protein L13-like 15 71724180 71734616 - 116884412 MODEL JAAIVD010000010 pseudo 625864074 Gdf2 growth differentiation factor 2 ENCODES a protein that exhibits cytokine activity (ortholog); growth factor activity (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); angiogenesis (ortholog); blood vessel morphogenesis (ortholog); ASSOCIATED WITH Bone Fractures (ortholog); hepatocellular carcinoma (ortholog); hereditary hemorrhagic telangiectasia (ortholog); FOUND IN extracellular region (ortholog) 13 9712166 9716335 + 22301074;30032202 116914272 MODEL JAAIVD010000008;XM_032918493 XP_032774384 growth/differentiation factor 2 protein-coding 625864078 LOC116910275 olfactory receptor 1361-like 9 38382446 38383390 - 116910275 MODEL JAAIVD010000002 pseudo 625864079 LOC116896198 guanylate-binding protein 5-like 3 18305949 18317063 - 22301074;30032202 116896198 MODEL JAAIVD010000012;XM_032897245 XP_032753136 protein-coding 625864093 Fhad1 forkhead associated phosphopeptide binding domain 1 INVOLVED IN apoptotic process (ortholog); spermatogenesis (ortholog); FOUND IN sperm flagellum (ortholog) 1 16154283 16273271 + 22301074 116893183 MODEL JAAIVD010000025;XM_032895089 XP_032750980 forkhead-associated domain-containing protein 1 protein-coding 625864130 LOC116909796 uncharacterized LOC116909796 9 46564769 46573859 + 116909796 MODEL JAAIVD010000002;XR_004389099 ncrna 625864134 LOC116908269 40S ribosomal protein S27-like 8 110667752 110678107 + 22301074;30032202 116908269 MODEL JAAIVD010000027;XM_032911518 XP_032767409 protein-coding 625864139 Fcer2 Fc fragment of IgE receptor II ENCODES a protein that exhibits IgE binding (ortholog); low-affinity IgE receptor activity (ortholog); protease binding (ortholog); INVOLVED IN B cell antigen processing and presentation (ortholog); defense response to bacterium (ortholog); Fc receptor-mediated immune complex endocytosis (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH encephalitis (ortholog); human immunodeficiency virus infectious disease (ortholog); Immediate Hypersensitivity (ortholog); FOUND IN plasma membrane (ortholog) 16 1608545 1615541 - 116885423 MODEL JAAIVD010000004;XM_032886709 XP_032742600 low affinity immunoglobulin epsilon Fc receptor protein-coding 625864153 Gpr101 G protein-coupled receptor 101 ASSOCIATED WITH growth hormone secreting pituitary adenoma (ortholog); growth hormone secreting pituitary adenoma 2 (ortholog); FOUND IN signaling receptor complex (ortholog) X 39210379 39214569 - 22301074;30032202 116888745 MODEL JAAIVD010000014;XM_032890040 XP_032745931 probable G-protein coupled receptor 101 protein-coding 625864159 LOC116889098 protein BEX2 X 87463514 87464564 + 30032202 116889098 MODEL JAAIVD010000014;XM_032890267 XP_032746158 protein-coding 625864165 Cldn14 claudin 14 ASSOCIATED WITH Acidoses (ortholog); autosomal recessive nonsyndromic deafness 29 (ortholog); Deafness (ortholog); FOUND IN bicellular tight junction (ortholog); plasma membrane (ortholog) 4 50723492 50733743 + 30032202 116897969 MODEL JAAIVD010000003;XM_032899369 XP_032755260 claudin-14 protein-coding 625864171 Cntd1 cyclin N-terminal domain containing 1 INVOLVED IN reciprocal meiotic recombination (ortholog); regulation of meiotic cell cycle (ortholog); spermatogenesis (ortholog); FOUND IN chromosome (ortholog) 9 60583092 60592287 + 30032202 116910177 MODEL JAAIVD010000002;XM_032914036;XM_032914037 XP_032769927;XP_032769928 cyclin N-terminal domain-containing protein 1 protein-coding 625864185 Mtm1 myotubularin 1 ENCODES a protein that exhibits intermediate filament binding (ortholog); phosphatidylinositol binding (ortholog); phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity (ortholog); INVOLVED IN endosome to lysosome transport (ortholog); intermediate filament organization (ortholog); mitochondrion distribution (ortholog); ASSOCIATED WITH autosomal dominant centronuclear myopathy (ortholog); centronuclear myopathy (ortholog); centronuclear myopathy X-linked (ortholog); FOUND IN cytoplasm (ortholog); filopodium (ortholog); I band (ortholog) 7 353311 370899 - 22301074;30032202 116905728 MODEL JAAIVD010000026;XM_032908696;XM_032908697 XP_032764587;XP_032764588 myotubularin protein-coding 625864208 Poc1b POC1 centriolar protein B INVOLVED IN acrosome assembly (ortholog); cell morphogenesis (ortholog); cell population proliferation (ortholog); ASSOCIATED WITH cone-rod dystrophy (ortholog); cone-rod dystrophy 20 (ortholog); fundus dystrophy (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 1 178225752 178322352 + 22301074;30032202 116908571 MODEL JAAIVD010000025;XM_032911782 XP_032767673 POC1 centriolar protein homolog B protein-coding 625864224 LOC116902579 U1 spliceosomal RNA 5 3276516 3276671 + 116902579 MODEL JAAIVD010000023;XR_004388172 snrna 625864227 Fam149a family with sequence similarity 149 member A 13 42455386 42507318 + 116914670 MODEL JAAIVD010000008;XM_032919075 XP_032774966 protein FAM149A protein-coding 625864244 Cd40lg CD40 ligand ENCODES a protein that exhibits CD40 receptor binding (ortholog); cytokine activity (ortholog); integrin binding (ortholog); INVOLVED IN B cell differentiation (ortholog); B cell proliferation (ortholog); CD40 signaling pathway (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; obesity pathway; ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); Acute Coronary Syndrome (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN cell body (ortholog); cell projection (ortholog); cell surface (ortholog) X 117649712 117661154 + 22301074 116888835 MODEL JAAIVD010000014;XM_032890109 XP_032746000 protein-coding 625864251 LOC116897732 40S ribosomal protein S12-like 4 94953836 94954499 + 116897732 MODEL JAAIVD010000003 pseudo 625864252 Vti1b vesicle transport through interaction with t-SNAREs 1B ENCODES a protein that exhibits chloride channel inhibitor activity (ortholog); SNAP receptor activity (ortholog); SNARE binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); regulation of protein localization to plasma membrane (ortholog); FOUND IN early endosome membrane (ortholog); Golgi apparatus (ortholog); late endosome membrane (ortholog) 7 93263255 93278483 - 22301074;30032202 116905204 MODEL JAAIVD010000026;XM_032908016;XM_032908017 XP_032763907;XP_032763908 vesicle transport through interaction with t-SNAREs homolog 1B protein-coding 625864266 LOC116915147 small nucleolar RNA SNORD69 13 6714506 6714585 - 116915147 MODEL JAAIVD010000008;XR_004389817 snorna 625864269 LOC116900553 olfactory receptor 4K14-like 5 89886713 89887654 - 22301074 116900553 MODEL JAAIVD010000023;XM_032902279 XP_032758170 protein-coding 625864273 Trak1 trafficking kinesin protein 1 ENCODES a protein that exhibits GABA receptor binding (ortholog); TPR domain binding (ortholog); INVOLVED IN axonal transport of mitochondrion (ortholog); dendrite morphogenesis (ortholog); endosome to lysosome transport (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH developmental and epileptic encephalopathy 68 (ortholog); genetic disease (ortholog); schizophrenia (ortholog); FOUND IN axonal growth cone (ortholog); cytoplasm (ortholog); dendrite (ortholog) 8 112540352 112634007 + 30032202 116907967 MODEL JAAIVD010000027;XM_032911194 XP_032767085 trafficking kinesin-binding protein 1 protein-coding 625864293 Znf704 zinc finger protein 704 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog) 3 143511243 143685794 - 30032202 116897029 MODEL JAAIVD010000012;XM_032898647 XP_032754538 protein-coding 625864306 LOC116908285 gamma-secretase subunit APH-1B-like 8 61178749 61195924 - 22301074;30032202 116908285 MODEL JAAIVD010000027;XM_032911545 XP_032767436 protein-coding 625864316 Dnajc15 DnaJ heat shock protein family (Hsp40) member C15 INVOLVED IN cellular response to starvation (ortholog); negative regulation of mitochondrial electron transport, NADH to ubiquinone (ortholog); negative regulation of protein-containing complex assembly (ortholog); ASSOCIATED WITH melanoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 12 46538325 46597531 + 30032202 116913413 MODEL JAAIVD010000007;XM_032917597 XP_032773488 dnaJ homolog subfamily C member 15 protein-coding 625864326 LOC116884890 60S ribosomal protein L21-like 15 60462028 60463636 - 116884890 MODEL JAAIVD010000010 pseudo 625864327 Mpdz multiple PDZ domain crumbs cell polarity complex component INVOLVED IN cell adhesion (ortholog); dendrite development (ortholog); intracellular protein transport (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal dominant intellectual developmental disorder 21 (ortholog); Congenital Hydrocephalus 2, with or without Brain or Eye Anomalies (ortholog); FOUND IN apical plasma membrane (ortholog); apicolateral plasma membrane (ortholog); bicellular tight junction (ortholog) 1 72186554 72333973 + 22301074 116900731 MODEL JAAIVD010000025;XM_032902440 XP_032758331 multiple PDZ domain protein protein-coding 625864379 Slc35d2 solute carrier family 35 member D2 ENCODES a protein that exhibits nucleotide-sugar transmembrane transporter activity (ortholog); INVOLVED IN heparan sulfate proteoglycan biosynthetic process (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) 14 75421391 75454909 + 30032202 116883721 MODEL JAAIVD010000009;XM_032884944 XP_032740835 UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter protein-coding 625864395 LOC116892239 RNA-binding protein with serine-rich domain 1-like 2 18469861 18575973 + 116892239 MODEL JAAIVD010000001 pseudo 625864396 Smim10l1 small integral membrane protein 10 like 1 FOUND IN mitochondrion (ortholog) 6 15712010 15715266 - 116903180 MODEL JAAIVD010000024;XM_032905550 XP_032761441 small integral membrane protein 10-like protein 1 protein-coding 625864402 Parp14 poly(ADP-ribose) polymerase family member 14 ENCODES a protein that exhibits enzyme binding (ortholog); NAD+ binding (ortholog); NAD+ poly-ADP-ribosyltransferase activity (ortholog); INVOLVED IN NAD+ catabolic process (ortholog); negative regulation of gene expression (ortholog); negative regulation of type II interferon-mediated signaling pathway (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; interleukin-4 signaling pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog) 4 20608169 20639726 - 22301074;30032202 116898813 MODEL JAAIVD010000003;XM_032900165;XM_032900166 XP_032756056;XP_032756057 protein mono-ADP-ribosyltransferase PARP14 protein-coding 625864426 Kdm1b lysine demethylase 1B ENCODES a protein that exhibits FAD binding (ortholog); FAD-dependent H3K4me/H3K4me3 demethylase activity (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN epigenetic programing of female pronucleus (ortholog); genomic imprinting (ortholog); transcription initiation-coupled chromatin remodeling (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH atrial fibrillation (ortholog); retinoblastoma (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleosome (ortholog) 14 66036583 66075921 + 22301074;30032202 116883369 MODEL JAAIVD010000009;XM_032884483 XP_032740374 lysine-specific histone demethylase 1B protein-coding 625864451 LOC116898313 clusterin-associated protein 1-like 4 37000233 37023171 + 116898313 MODEL JAAIVD010000003 pseudo 625864452 Fmn2 formin 2 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); cell migration (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 47 (ortholog); genetic disease (ortholog); Hirschsprung's disease (ortholog); FOUND IN actin cytoskeleton (ortholog); cell cortex (ortholog); cytoplasmic vesicle membrane (ortholog) 10 53089979 53399429 + 22301074;30032202 116911021 MODEL JAAIVD010000005;XM_032914755 XP_032770646 formin-2 protein-coding 625864474 LOC116883653 uncharacterized LOC116883653 14 61025617 61095389 + 116883653 MODEL JAAIVD010000009;XR_004385777 ncrna 625864479 Gde1 glycerophosphodiester phosphodiesterase 1 ENCODES a protein that exhibits glycerophosphodiester phosphodiesterase activity (ortholog); glycerophosphoinositol glycerophosphodiesterase activity (ortholog); phosphatidylcholine lysophospholipase A1 activity (ortholog); INVOLVED IN ethanolamine metabolic process (ortholog); N-acylethanolamine metabolic process (ortholog); phospholipid metabolic process (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; FOUND IN membrane (ortholog); plasma membrane (ortholog) 2 82946849 82962299 + 22301074 116891607 MODEL JAAIVD010000001;XM_032892806 XP_032748697 protein-coding 625864489 Frem2 FRAS1 related extracellular matrix 2 INVOLVED IN cell adhesion (ortholog); embryonic digit morphogenesis (ortholog); eye development (ortholog); ASSOCIATED WITH CAKUT (ortholog); Childhood Schizophrenia (ortholog); congenital diaphragmatic hernia (ortholog); FOUND IN basement membrane (ortholog) 3 100785571 100925320 + 22301074 116896877 MODEL JAAIVD010000012;XM_032898423 XP_032754314 FRAS1-related extracellular matrix protein 2 protein-coding 625864516 LOC116894220 olfactory receptor 510-like 2 106687193 106688137 + 22301074;30032202 116894220 MODEL JAAIVD010000001;XM_032895931 XP_032751822 protein-coding 625864519 LOC116906363 small nucleolar RNA SNORD113/SNORD114 family 7 127205492 127205572 + 116906363 MODEL JAAIVD010000026 pseudo 625864520 LOC116885803 CD209 antigen-like protein E 16 2208494 2211493 + 116885803 MODEL JAAIVD010000004;XM_032887137 XP_032743028 protein-coding 625864531 Mtres1 mitochondrial transcription rescue factor 1 ENCODES a protein that exhibits ribosomal large subunit binding (ortholog); RNA binding (ortholog); tRNA binding (ortholog); INVOLVED IN regulation of mitochondrial transcription (ortholog); rescue of stalled mitochondrial ribosome (ortholog); FOUND IN mitochondrial matrix (ortholog) 18 43239757 43257603 - 116887166 MODEL JAAIVD010000013;XM_032888716;XM_032888717 XP_032744607;XP_032744608 protein-coding 625864543 Gabrp gamma-aminobutyric acid type A receptor subunit pi ENCODES a protein that exhibits GABA-A receptor activity (ortholog); GABA-gated chloride ion channel activity (ortholog); FOUND IN plasma membrane (ortholog) 9 6363133 6388983 - 22301074;30032202 116909093 MODEL JAAIVD010000002;XM_032912563;XM_032912564 XP_032768454;XP_032768455 gamma-aminobutyric acid receptor subunit pi protein-coding 625864563 LOC116902760 macrophage migration inhibitory factor-like 6 47230527 47230874 + 30032202 116902760 MODEL JAAIVD010000024;XM_032905108 XP_032760999 protein-coding 625864566 LOC116910933 60S ribosomal protein L29-like 10 65588900 65589244 + 116910933 MODEL JAAIVD010000005;XM_032914679 XP_032770570 protein-coding 625864569 LOC116888545 40S ribosomal protein S2-like X 8481597 8482310 - 116888545 MODEL JAAIVD010000014 pseudo 625864570 LOC116887486 class I histocompatibility antigen, Non-RT1.A alpha-1 chain-like 18 9266243 9269828 - 30032202 116887486 MODEL JAAIVD010000013;XM_032889110 XP_032745001 protein-coding 625864581 LOC116886307 uncharacterized LOC116886307 17 28250691 28252233 - 116886307 MODEL JAAIVD010000011;XR_004386097 ncrna 625864585 Usp13 ubiquitin specific peptidase 13 ENCODES a protein that exhibits BAT3 complex binding (ortholog); cysteine-type deubiquitinase activity (ortholog); cysteine-type endopeptidase activity (ortholog); INVOLVED IN cell population proliferation (ortholog); maintenance of unfolded protein (ortholog); positive regulation of ERAD pathway (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); skin disease (ortholog) 3 122097232 122201045 - 22301074 116896958 MODEL JAAIVD010000012;XM_032898534;XR_004387385 XP_032754425 ubiquitin carboxyl-terminal hydrolase 13 protein-coding 625864614 Rrh retinal pigment epithelium-derived rhodopsin homolog 3 29480714 29494886 + 22301074;30032202 116896265 MODEL JAAIVD010000012;XM_032897341 XP_032753232 visual pigment-like receptor peropsin protein-coding 625864625 LOC116889820 small nucleolar RNA SNORD116 116889820 MODEL JAAIVD010001126;XR_004386511 snorna 625864626 Commd5 COMM domain containing 5 INVOLVED IN positive regulation of cell growth (ortholog); positive regulation of epithelial cell differentiation (ortholog); proximal tubule morphogenesis (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 249227631 249229037 + 30032202 116913461 MODEL JAAIVD010000025;XM_032917666;XM_032917672;XM_032917678;XM_032917684;XM_032917692 XP_032773557;XP_032773563;XP_032773569;XP_032773575;XP_032773583 COMM domain-containing protein 5 protein-coding 625864645 Pdlim2 PDZ and LIM domain 2 ENCODES a protein that exhibits alpha-actinin binding (ortholog); filamin binding (ortholog); muscle alpha-actinin binding (ortholog); INVOLVED IN protein catabolic process (ortholog); FOUND IN actin cytoskeleton (ortholog); cortical actin cytoskeleton (ortholog); focal adhesion (ortholog) 12 54171581 54190207 + 30032202 116913623 MODEL JAAIVD010000007;XM_032917884;XM_032917885;XM_032917886;XM_032917887 XP_032773775;XP_032773776;XP_032773777;XP_032773778 PDZ and LIM domain protein 2 protein-coding 625864670 LOC116908206 nucleoporin NUP35-like 8 67105775 67106743 - 116908206 MODEL JAAIVD010000027 pseudo 625864671 Nbl1 NBL1, DAN family BMP antagonist ENCODES a protein that exhibits BMP binding (ortholog); identical protein binding (ortholog); morphogen activity (ortholog); INVOLVED IN determination of dorsal identity (ortholog); negative regulation of BMP signaling pathway (ortholog); negative regulation of monocyte chemotaxis (ortholog); FOUND IN extracellular region (ortholog) 1 19108493 19119710 + 30032202 116893763 MODEL JAAIVD010000025;XM_032895469 XP_032751360 neuroblastoma suppressor of tumorigenicity 1 protein-coding 625864679 LOC116905610 glyceraldehyde-3-phosphate dehydrogenase-like 7 13736283 13755652 + 116905610 MODEL JAAIVD010000026 pseudo 625864680 Slc25a11 solute carrier family 25 member 11 ENCODES a protein that exhibits alpha-ketoglutarate transmembrane transporter activity (ortholog); oxoglutarate:malate antiporter activity (ortholog); INVOLVED IN gluconeogenesis (ortholog); malate-aspartate shuttle (ortholog); PARTICIPATES IN fructose-1,6-bisphosphatase deficiency pathway; gluconeogenesis pathway; glycogen storage disease type Ia pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); pheochromocytoma/paraganglioma syndrome 6 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 9 50255146 50257992 - 30032202 116910491 MODEL JAAIVD010000002;XM_032914382 XP_032770273 mitochondrial 2-oxoglutarate/malate carrier protein protein-coding 625864692 LOC116895871 rho GTPase-activating protein 20-like 3 105089825 105121571 - 22301074;30032202 116895871 MODEL JAAIVD010000012;XM_032896970 XP_032752861 protein-coding 625864707 LOC116897740 hypoxanthine-guanine phosphoribosyltransferase-like 4 175405513 175411218 - 116897740 MODEL JAAIVD010000003 pseudo 625864708 Ubxn8 UBX domain protein 8 INVOLVED IN ERAD pathway (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 13 53374848 53394749 + 30032202 116914709 MODEL JAAIVD010000008;XM_032919139 XP_032775030 UBX domain-containing protein 8 protein-coding 625864720 Pcolce procollagen C-endopeptidase enhancer ENCODES a protein that exhibits collagen binding (ortholog); heparin binding (ortholog); peptidase activator activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); proteolysis (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); liver cirrhosis (ortholog) 16 16410923 16417648 + 22301074 116885763 MODEL JAAIVD010000004;XM_032887081 XP_032742972 procollagen C-endopeptidase enhancer 1 protein-coding 625864733 Dnajc8 DnaJ heat shock protein family (Hsp40) member C8 ENCODES a protein that exhibits Hsp70 protein binding (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 1 25684379 25702122 - 30032202 116895455 MODEL JAAIVD010000025;XM_032896727 XP_032752618 dnaJ homolog subfamily C member 8 protein-coding 625864746 Trnas-cga transfer RNA serine (anticodon CGA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 1 155924358 155924439 - 116890644 MODEL JAAIVD010000025 trna 625864747 Col15a1 collagen type XV alpha 1 chain PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); Prostatic Neoplasms (ortholog); FOUND IN basement membrane (ortholog); endoplasmic reticulum (ortholog) 1 100337644 100407534 + 30032202 116898918 MODEL JAAIVD010000025;XM_032900364 XP_032756255 collagen alpha-1(XV) chain protein-coding 625864789 LOC116905533 protein FAM167B-like 7 76243713 76244158 - 116905533 MODEL JAAIVD010000026 pseudo 625864790 Crybb2 crystallin beta B2 ENCODES a protein that exhibits identical protein binding (ortholog); structural constituent of eye lens (ortholog); INVOLVED IN camera-type eye development (ortholog); visual perception (ortholog); ASSOCIATED WITH autoimmune disease (ortholog); cataract (ortholog); cataract 3 multiple types (ortholog) 16 40909927 40919533 + 30032202 116885479 MODEL JAAIVD010000004;XM_032886768 XP_032742659 beta-crystallin B2 protein-coding 625864799 Anxa1 annexin A1 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); alpha-beta T cell differentiation (ortholog); arachidonate secretion (ortholog); PARTICIPATES IN cyclooxygenase mediated pathway of arachidonic acid metabolism; ASSOCIATED WITH acute kidney failure (ortholog); Animal Mammary Neoplasms (ortholog); asthma (ortholog); FOUND IN actin filament (ortholog); apical plasma membrane (ortholog); cell surface (ortholog) 2 20396186 20412032 - 22301074;30032202 116891023 MODEL JAAIVD010000001;XM_032891703 XP_032747594 protein-coding 625864816 Pcnx3 pecanex 3 ASSOCIATED WITH systemic lupus erythematosus (ortholog) 2 2007914 2029823 + 22301074 116890699 MODEL JAAIVD010000001;XM_032891118;XM_032891119;XM_032891121;XM_032891122;XM_032891123 XP_032747009;XP_032747010;XP_032747012;XP_032747013;XP_032747014 pecanex-like protein 3 protein-coding 625864862 LOC116912744 zinc finger protein 431-like 11 14706093 14776292 - 30032202 116912744 MODEL JAAIVD010000006;XM_032916888;XM_032916889;XM_032916890;XM_032916891;XM_032916892;XM_032916893 XP_032772779;XP_032772780;XP_032772781;XP_032772782;XP_032772783;XP_032772784 zinc finger protein 120-like protein-coding 625864893 LOC116899614 uncharacterized LOC116899614 4 159961502 159967067 - 116899614 MODEL JAAIVD010000003;XR_004387746 ncrna 625864898 LOC116890227 translationally-controlled tumor protein-like 1 270266060 270266549 - 116890227 MODEL JAAIVD010000025 pseudo 625864899 Rcan2 regulator of calcineurin 2 INVOLVED IN calcineurin-NFAT signaling cascade (ortholog); locomotion involved in locomotory behavior (ortholog); Notch signaling pathway (ortholog); ASSOCIATED WITH metabolic dysfunction-associated steatotic liver disease (ortholog) 4 85827742 86044813 - 22301074;30032202 116899145 MODEL JAAIVD010000003;XM_032900686;XM_032900687 XP_032756577;XP_032756578 calcipressin-2 protein-coding 625864911 LOC116905567 protein BEX4-like 7 89500553 89502054 - 116905567 MODEL JAAIVD010000026 pseudo 625864912 Id1 inhibitor of DNA binding 1, HLH protein ENCODES a protein that exhibits identical protein binding (ortholog); proteasome binding (ortholog); transcription factor binding (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cell-abiotic substrate adhesion (ortholog); cellular response to dopamine (ortholog); PARTICIPATES IN interleukin-3 signaling pathway; ASSOCIATED WITH cholestasis (ortholog); disease of cellular proliferation (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 5 132063621 132064787 + 22301074;30032202 116902126 MODEL JAAIVD010000023;XM_032904442;XM_032904443 XP_032760333;XP_032760334 DNA-binding protein inhibitor ID-1 protein-coding 625864922 LOC116895007 small nucleolar RNA SNORA48 2 72068311 72068454 + 116895007 MODEL JAAIVD010000001;XR_004387195 snorna 625864925 Erc2 ELKS/RAB6-interacting/CAST family member 2 ENCODES a protein that exhibits PDZ domain binding (ortholog); protein-containing complex binding (ortholog); structural constituent of presynaptic active zone (ortholog); INVOLVED IN regulation of calcium-dependent activation of synaptic vesicle fusion (ortholog); regulation of presynaptic cytosolic calcium ion concentration (ortholog); synapse organization (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); Golgi-associated vesicle (ortholog) 13 3343360 4227341 + 30032202 116914409 MODEL JAAIVD010000008;XM_032918651;XM_032918652;XM_032918653;XM_032918654;XM_032918655;XM_032918656;XM_032918657;XM_032918658;XM_032918660;XM_032918661;XM_032918662;XM_032918663;XM_032918664;XM_032918665;XM_032918666;XM_032918667;XM_032918668;XR_004389747 XP_032774542;XP_032774543;XP_032774544;XP_032774545;XP_032774546;XP_032774547;XP_032774548;XP_032774549;XP_032774551;XP_032774552;XP_032774553;XP_032774554;XP_032774555;XP_032774556;XP_032774557;XP_032774558;XP_032774559 ERC protein 2 protein-coding 625864981 Gpx2 glutathione peroxidase 2 ENCODES a protein that exhibits glutathione peroxidase activity (ortholog); phospholipid-hydroperoxide glutathione peroxidase activity (ortholog); INVOLVED IN biological process involved in interaction with symbiont (ortholog); negative regulation of inflammatory response to antigenic stimulus (ortholog); response to salicylic acid (ortholog); ASSOCIATED WITH alcoholic gastritis (ortholog); autism spectrum disorder (ortholog); Breast Neoplasms (ortholog); FOUND IN cytosol (ortholog) 7 90925119 90928234 - 22301074;30032202 116905188 MODEL JAAIVD010000026;XM_032907978 XP_032763869 protein-coding 625864987 LOC116897858 dynein light chain 1, cytoplasmic-like 4 18620394 18620657 - 116897858 MODEL JAAIVD010000003 pseudo 625864988 LOC116908715 uncharacterized LOC116908715 9 64934976 64936765 - 116908715 MODEL JAAIVD010000002;XR_004389015 ncrna 625864993 LOC116889682 ribosome-binding ATPase YchF-like 22301074;30032202 116889682 MODEL JAAIVD010000051;XM_032890571 XP_032746462 protein-coding 625864994 Cdkal1 CDKAL1 threonylcarbamoyladenosine tRNA methylthiotransferase ENCODES a protein that exhibits tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase activity (ortholog); INVOLVED IN maintenance of translational fidelity (ortholog); tRNA methylthiolation (ortholog); ASSOCIATED WITH Birth Weight (ortholog); Body Weight (ortholog); diabetes mellitus (ortholog); FOUND IN endoplasmic reticulum (ortholog); rough endoplasmic reticulum (ortholog) 14 48501711 48769138 - 22301074;30032202 116883220 MODEL JAAIVD010000009;XM_032884235 XP_032740126 CDK5 regulatory subunit associated protein 1 like 1;threonylcarbamoyladenosine tRNA methylthiotransferase protein-coding 625865006 LOC116912708 uncharacterized LOC116912708 1 173452177 173473491 - 116912708 MODEL JAAIVD010000025 pseudo 625865007 LOC116906434 small nucleolar RNA SNORA48 7 46143200 46143343 - 116906434 MODEL JAAIVD010000026;XR_004388694 snorna 625865010 LOC116888824 uncharacterized LOC116888824 X 6395438 6398950 + 116888824 MODEL JAAIVD010000014 pseudo 625865011 Rhot2 ras homolog family member T2 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); GDP binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN cellular homeostasis (ortholog); mitochondrial outer membrane permeabilization (ortholog); mitochondrion transport along microtubule (ortholog); PARTICIPATES IN mitochondria transport pathway; FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 9 3104812 3109667 - 22301074;30032202 116908548 MODEL JAAIVD010000002;XM_032911748 XP_032767639 mitochondrial Rho GTPase 2 protein-coding 625865034 Trnar-ucg transfer RNA arginine (anticodon UCG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889713 MODEL JAAIVD010000060 trna 625865035 C14H6orf120 chromosome 14 C6orf120 homolog 14 990893 993086 - 116884007 MODEL JAAIVD010000009;XM_032885244;XM_032885245;XM_032885246 XP_032741135;XP_032741136;XP_032741137 UPF0669 protein C6orf120 homolog protein-coding 625865049 LOC116909251 dedicator of cytokinesis protein 2 9 7309235 7458043 - 30032202 116909251 MODEL JAAIVD010000002;XM_032912772 XP_032768663 protein-coding 625865079 Gucy2d guanylate cyclase 2D, retinal ENCODES a protein that exhibits guanylate cyclase activity (ortholog); identical protein binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN cGMP biosynthetic process (ortholog); cGMP metabolic process (ortholog); PARTICIPATES IN visual phototransduction pathway; ASSOCIATED WITH choroidal sclerosis (ortholog); cone dystrophy (ortholog); cone-rod dystrophy (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); photoreceptor outer segment (ortholog); photoreceptor outer segment membrane (ortholog) 9 48847463 48862705 - 22301074;30032202 116909633 MODEL JAAIVD010000002;XM_032913274 XP_032769165 retinal guanylyl cyclase 1 protein-coding 625865103 LOC116893692 olfactory receptor 5B2-like 2 12953713 12954633 - 22301074;30032202 116893692 MODEL JAAIVD010000001;XM_032895408 XP_032751299 protein-coding 625865106 Catsperz catsper channel auxiliary subunit zeta INVOLVED IN flagellated sperm motility (ortholog); male meiotic nuclear division (ortholog); sperm capacitation (ortholog); FOUND IN CatSper complex (ortholog); cytoplasm (ortholog); sperm midpiece (ortholog) 2 868572 872168 + 30032202 116894778 MODEL JAAIVD010000001;XM_032896431 XP_032752322 cation channel sperm-associated protein subunit zeta protein-coding 625865114 Neurog1 neurogenin 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); E-box binding (ortholog); INVOLVED IN auditory behavior (ortholog); cell fate commitment (ortholog); cochlea development (ortholog); ASSOCIATED WITH CRANIAL DYSINNERVATION DISORDER, CONGENITAL, WITH ABSENT CORNEAL REFLEX AND DEVELOPMENTAL DELAY (ortholog); FOUND IN neuronal cell body (ortholog); perikaryon (ortholog) 14 81828153 81829668 + 22301074 116915208 MODEL JAAIVD010000009;XM_032919578 XP_032775469 neurogenin-1 protein-coding 625865119 Mgat4b alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity (ortholog); glycosyltransferase activity (ortholog); INVOLVED IN glycoprotein biosynthetic process (ortholog); protein N-linked glycosylation (ortholog) 9 32889628 32899382 + 30032202 116909514 MODEL JAAIVD010000002;XM_032913119;XM_032913120 XP_032769010;XP_032769011 protein-coding 625865142 LOC116885187 protein POLR1D-like 16 6760888 6793652 - 116885187 MODEL JAAIVD010000004;XM_032886405 XP_032742296 protein-coding 625865149 Copg1 coat protein complex I subunit gamma 1 INVOLVED IN establishment of Golgi localization (ortholog); organelle transport along microtubule (ortholog); ASSOCIATED WITH combined immunodeficiency (ortholog); immunodeficiency 128 (ortholog); malignant mesothelioma (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) 6 58390670 58416653 - 22301074;30032202 116903532 MODEL JAAIVD010000024;XM_032906142;XM_032906143 XP_032762033;XP_032762034 COPI coat complex subunit gamma 1;coatomer subunit gamma-1 protein-coding 625865182 LOC116914120 small nucleolar RNA SNORA17 12 20194494 20194624 + 116914120 MODEL JAAIVD010000007;XR_004389684 snorna 625865185 F10 coagulation factor X ENCODES a protein that exhibits phospholipid binding (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN positive regulation of TOR signaling (ortholog); proteolysis (ortholog); zymogen activation (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH blood coagulation disease (ortholog); breast cancer (ortholog); factor X deficiency (ortholog) 13 70631495 70650566 - 22301074;30032202 116914519 MODEL JAAIVD010000008;XM_032918850 XP_032774741 protein-coding 625865197 LOC116900241 olfactory receptor 998-like 5 62926750 62927694 + 22301074;30032202 116900241 MODEL JAAIVD010000023;XM_032901992 XP_032757883 protein-coding 625865200 Gdpd1 glycerophosphodiester phosphodiesterase domain containing 1 ENCODES a protein that exhibits phosphatidylcholine lysophospholipase A1 activity (ortholog); phosphoric diester hydrolase activity (ortholog); INVOLVED IN N-acylethanolamine metabolic process (ortholog); phospholipid metabolic process (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog); perinuclear region of cytoplasm (ortholog) 9 83722334 83764639 + 22301074;30032202 116909021 MODEL JAAIVD010000002;XM_032912497 XP_032768388 lysophospholipase D GDPD1 protein-coding 625865214 Gclc glutamate-cysteine ligase catalytic subunit ENCODES a protein that exhibits ADP binding (ortholog); glutamate binding (ortholog); glutamate-cysteine ligase activity (ortholog); INVOLVED IN blood vessel diameter maintenance (ortholog); cell redox homeostasis (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; cysteine metabolic pathway; glutamic acid/glutamate metabolic pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); cataract (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytosol (ortholog); glutamate-cysteine ligase complex (ortholog) 8 72004657 72040891 + 22301074;30032202 116906644 MODEL JAAIVD010000027;XM_032909420 XP_032765311 glutamate--cysteine ligase catalytic subunit protein-coding 625865234 Pus3 pseudouridine synthase 3 ENCODES a protein that exhibits pseudouridine synthase activity (ortholog); tRNA pseudouridine(38/39) synthase activity (ortholog); INVOLVED IN tRNA pseudouridine synthesis (ortholog); ASSOCIATED WITH Neurodevelopmental Disorder with Microcephaly and Gray Sclerae (ortholog) 8 31097411 31105620 + 22301074;30032202 116906789 MODEL JAAIVD010000027;XM_032909650 XP_032765541 tRNA pseudouridine(38/39) synthase protein-coding 625865242 LOC116907102 olfactory receptor 8B3-like 8 32369333 32370477 - 22301074;30032202 116907102 MODEL JAAIVD010000027;XM_032910069 XP_032765960 protein-coding 625865247 LOC116884479 ribosome production factor 1-like 15 161411 162649 - 30032202 116884479 MODEL JAAIVD010000010;XM_032885595 XP_032741486 protein-coding 625865252 Atp5me ATP synthase membrane subunit e ENCODES a protein that exhibits protein-containing complex binding (ortholog); proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN proton motive force-driven mitochondrial ATP synthesis (ortholog); ASSOCIATED WITH heart disease (ortholog); FOUND IN mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) 11 18211152 18212364 - 22301074;30032202 116912560 MODEL JAAIVD010000006;XM_032916662 XP_032772553 ATP synthase subunit e, mitochondrial protein-coding 625865260 LOC116910482 uncharacterized LOC116910482 9 92145212 92146129 + 116910482 MODEL JAAIVD010000002;XR_004389153 ncrna 625865264 Abcc2 ATP binding cassette subfamily C member 2 ENCODES a protein that exhibits ABC-type glutathione S-conjugate transporter activity (ortholog); ABC-type xenobiotic transporter activity (ortholog); ATPase-coupled transmembrane transporter activity (ortholog); INVOLVED IN antibiotic metabolic process (ortholog); benzylpenicillin metabolic process (ortholog); bile acid and bile salt transport (ortholog); PARTICIPATES IN docetaxel pharmacodynamics pathway; doxorubicin pharmacokinetics pathway; irinotecan pharmacodynamics pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); acute lymphoblastic leukemia (ortholog); alopecia (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); cell surface (ortholog) 2 43309922 43366112 + 22301074;30032202 116891199 MODEL JAAIVD010000001;XM_032892024 XP_032747915 canalicular multispecific organic anion transporter 1 protein-coding 625865300 LOC116889824 small nucleolar RNA SNORD116 116889824 MODEL JAAIVD010001336;XR_004386513 snorna 625865301 Ly86 lymphocyte antigen 86 INVOLVED IN positive regulation of lipopolysaccharide-mediated signaling pathway (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); calcinosis (ortholog); Experimental Liver Cirrhosis (ortholog) 14 56388178 56455071 + 30032202 116883600 MODEL JAAIVD010000009;XM_032884782 XP_032740673 protein-coding 625865310 LOC116897384 U6 spliceosomal RNA 3 202569397 202569503 + 116897384 MODEL JAAIVD010000012;XR_004387428 snrna 625865313 LOC116910404 carboxypeptidase Q-like 1 207235015 207321523 + 30032202 116910404 MODEL JAAIVD010000025;XM_032914247 XP_032770138 protein-coding 625865319 Wasf3 WASP family member 3 INVOLVED IN lamellipodium assembly (ortholog); modification of postsynaptic actin cytoskeleton (ortholog); oligodendrocyte development (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); systemic juvenile rheumatoid arthritis (ortholog); FOUND IN glutamatergic synapse (ortholog); lamellipodium (ortholog); postsynapse (ortholog) 16 7337213 7375945 - 22301074;30032202 116885406 MODEL JAAIVD010000004;XM_032886691;XM_032886692 XP_032742582;XP_032742583 wiskott-Aldrich syndrome protein family member 3 protein-coding 625865333 LOC116888484 T-complex protein 1 subunit zeta-like X 31627989 31629637 - 22301074;30032202 116888484 MODEL JAAIVD010000014;XM_032889759 XP_032745650 protein-coding 625865338 Nebl nebulette ENCODES a protein that exhibits actin filament binding (ortholog); cytoskeletal protein binding (ortholog); filamin binding (ortholog); INVOLVED IN cardiac muscle thin filament assembly (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); cardiomyopathy (ortholog); Digeorge Syndrome/Velocardiofacial Syndrome Complex 2 (ortholog); FOUND IN stress fiber (ortholog); Z disc (ortholog) 14 6519453 6633693 + 30032202 116883461 MODEL JAAIVD010000009;XM_032884610 XP_032740501 protein-coding 625865371 LOC116888539 ubiquinol-cytochrome-c reductase complex assembly factor 3-like 1 94256049 94256550 + 22301074;30032202 116888539 MODEL JAAIVD010000025;XM_032889848 XP_032745739 protein-coding 625865376 LOC116897597 small nucleolar RNA SNORA17 3 140728539 140728674 - 116897597 MODEL JAAIVD010000012;XR_004387597 snorna 625865379 Tcp1 t-complex 1 ENCODES a protein that exhibits protein folding chaperone (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); positive regulation of establishment of protein localization to telomere (ortholog); positive regulation of protein localization to Cajal body (ortholog); ASSOCIATED WITH INTELLECTUAL DEVELOPMENTAL DISORDER WITH POLYMICROGYRIA AND SEIZURES (ortholog); Prostatic Neoplasms (ortholog); FOUND IN acrosomal vesicle (ortholog); cell body (ortholog); centrosome (ortholog) 2 191644267 191651978 + 22301074;30032202 116892832 MODEL JAAIVD010000001;XM_032894720 XP_032750611 T-complex protein 1 subunit alpha protein-coding 625865395 LOC116900831 60S ribosomal protein L12-like 5 46645157 46645946 + 116900831 MODEL JAAIVD010000023 pseudo 625865396 Aaas aladin WD repeat nucleoporin INVOLVED IN fertilization (ortholog); glutathione metabolic process (ortholog); learning (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); achalasia (ortholog); genetic disease (ortholog); FOUND IN mitotic spindle (ortholog); nuclear envelope (ortholog); nuclear membrane (ortholog) 1 260731116 260743383 + 22301074;30032202 116883484 MODEL JAAIVD010000025;XM_032884644;XM_032884651 XP_032740535;XP_032740542 aladin protein-coding 625865418 LOC116906088 mitochondrial-processing peptidase subunit beta-like 7 69918372 69923724 + 116906088 MODEL JAAIVD010000026 pseudo 625865419 LOC116888118 elongin-B-like X 102830738 102884183 + 116888118 MODEL JAAIVD010000014 pseudo 625865420 Slc37a1 solute carrier family 37 member 1 ENCODES a protein that exhibits glucose 6-phosphate:phosphate antiporter activity (ortholog); INVOLVED IN glucose-6-phosphate transport (ortholog); phosphate ion transmembrane transport (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 18 2529003 2584135 - 22301074;30032202 116886950 MODEL JAAIVD010000013;XM_032888449 XP_032744340 glucose-6-phosphate exchanger SLC37A1 protein-coding 625865444 Fn1 fibronectin 1 ENCODES a protein that exhibits identical protein binding (ortholog); integrin binding (ortholog); mercury ion binding (ortholog); INVOLVED IN blood coagulation, fibrin clot formation (ortholog); calcium-independent cell-matrix adhesion (ortholog); cell adhesion (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Otitis Media (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); basement membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) 4 145148471 145216240 - 22301074;30032202 116899477 MODEL JAAIVD010000003;XM_032901302;XM_032901303;XM_032901304;XM_032901305;XM_032901306;XM_032901307;XM_032901308;XM_032901309;XM_032901310;XM_032901311 XP_032757193;XP_032757194;XP_032757195;XP_032757196;XP_032757197;XP_032757198;XP_032757199;XP_032757200;XP_032757201;XP_032757202 fibronectin protein-coding 625865505 LOC116883326 uncharacterized LOC116883326 14 20736762 20750984 + 116883326 MODEL JAAIVD010000009;XR_004385747 ncrna 625865510 Adk adenosine kinase ENCODES a protein that exhibits adenosine kinase activity (ortholog); deoxyadenosine kinase activity (ortholog); INVOLVED IN adenosine metabolic process (ortholog); AMP salvage (ortholog); circadian regulation of gene expression (ortholog); PARTICIPATES IN azathioprine pharmacodynamics pathway; mercaptopurine pharmacodynamics pathway; mercaptopurine pharmacokinetics pathway; ASSOCIATED WITH Brain Hypoxia-Ischemia (ortholog); brain infarction (ortholog); brain ischemia (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 12 90845847 91227965 + 22301074;30032202 116913673 MODEL JAAIVD010000007;XM_032917960;XM_032917961 XP_032773851;XP_032773852 protein-coding 625865528 LOC116914882 uncharacterized LOC116914882 13 72379566 72381319 - 116914882 MODEL JAAIVD010000008;XR_004389784 ncrna 625865533 Tagap T cell activation RhoGTPase activating protein INVOLVED IN defense response to virus (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Crohn's disease (ortholog); psoriasis (ortholog) 2 192208095 192215784 + 22301074;30032202 116892844 MODEL JAAIVD010000001;XM_032894733 XP_032750624 T-cell activation Rho GTPase-activating protein protein-coding 625865545 LOC116883720 uncharacterized LOC116883720 14 33725701 33903248 + 116883720 MODEL JAAIVD010000009;XR_004385778 ncrna 625865550 LOC116913651 olfactory receptor 1537-like 12 252785 253727 - 22301074;30032202 116913651 MODEL JAAIVD010000007;XM_032917920 XP_032773811 protein-coding 625865553 LOC116913447 actin-related protein 2/3 complex subunit 1B-like 12 67078829 67080018 - 116913447 MODEL JAAIVD010000007 pseudo 625865554 LOC116894156 olfactory receptor 2D3-like 2 104927005 104927943 - 22301074 116894156 MODEL JAAIVD010000001;XM_032895873 XP_032751764 protein-coding 625865558 Fbln7 fibulin 7 ENCODES a protein that exhibits heparan sulfate proteoglycan binding (ortholog); heparin binding (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) 5 107656389 107691458 + 22301074 116901950 MODEL JAAIVD010000023;XM_032904184 XP_032760075 fibulin-7 protein-coding 625865570 LOC116898661 uncharacterized LOC116898661 4 3383012 3388463 - 116898661 MODEL JAAIVD010000003;XR_004387652 ncrna 625865575 LOC116888618 olfactory receptor 13D1 1 96753755 96754693 + 22301074 116888618 MODEL JAAIVD010000025;XM_032889919 XP_032745810 protein-coding 625865578 Cebpd CCAAT enhancer binding protein delta ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN fat cell differentiation (ortholog); hematopoietic progenitor cell differentiation (ortholog); inner ear development (ortholog); PARTICIPATES IN forkhead class A signaling pathway; interleukin-6 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleus (ortholog) 4 1448811 1450521 - 30032202 116898610 MODEL JAAIVD010000003;XM_032899808 XP_032755699 CCAAT/enhancer-binding protein delta protein-coding 625865583 Abcc10 ATP binding cassette subfamily C member 10 ENCODES a protein that exhibits ABC-type glutathione S-conjugate transporter activity (ortholog); ABC-type transporter activity (ortholog); ABC-type xenobiotic transporter activity (ortholog); INVOLVED IN leukotriene metabolic process (ortholog); leukotriene transport (ortholog); PARTICIPATES IN multidrug resistance-associated protein mediated transport pathway; neviparine pharmacokinetics pathway; vinblastine pharmacodynamics pathway; ASSOCIATED WITH Recurrence (ortholog); Thyroid Neoplasms (ortholog); Zellweger syndrome (ortholog); FOUND IN basal plasma membrane (ortholog); basolateral plasma membrane (ortholog); plasma membrane (ortholog) 4 83543136 83563337 + 22301074;30032202 116899113 MODEL JAAIVD010000003;XM_032900633 XP_032756524 multidrug resistance-associated protein 7 protein-coding 625865608 Rps6kb2 ribosomal protein S6 kinase B2 ENCODES a protein that exhibits ATP binding (ortholog); peptide binding (ortholog); protein kinase activity (ortholog); INVOLVED IN negative regulation of insulin receptor signaling pathway (ortholog); positive regulation of translational initiation (ortholog); protein phosphorylation (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN cytosol (ortholog) 2 3478744 3485674 + 22301074 116890782 MODEL JAAIVD010000001;XM_032891252 XP_032747143 ribosomal protein S6 kinase beta-2 protein-coding 625865627 Slc38a8 solute carrier family 38 member 8 INVOLVED IN aspartate metabolic process (ortholog); neuron projection development (ortholog); optic nerve development (ortholog); ASSOCIATED WITH Foveal Hypoplasia (ortholog); foveal hypoplasia 2 (ortholog); genetic disease (ortholog) 17 39127569 39147603 - 30032202 116886422 MODEL JAAIVD010000011;XM_032887907 XP_032743798 putative sodium-coupled neutral amino acid transporter 8 protein-coding 625865640 Decr2 2,4-dienoyl-CoA reductase 2 ENCODES a protein that exhibits 2,4-dienoyl-CoA reductase (NADPH) activity (ortholog); trans-2-enoyl-CoA reductase (NADPH) activity (ortholog); INVOLVED IN unsaturated fatty acid biosynthetic process (ortholog); FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog) 9 3341913 3351033 - 30032202 116909862 MODEL JAAIVD010000002;XM_032913588;XM_032913589 XP_032769479;XP_032769480 peroxisomal 2,4-dienoyl-CoA reductase protein-coding 625865657 LOC116906638 60S ribosomal protein L35-like 8 5429433 5429790 - 116906638 MODEL JAAIVD010000027 pseudo 625865658 Rps6ka2 ribosomal protein S6 kinase A2 ENCODES a protein that exhibits protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); protein serine/threonine/tyrosine kinase activity (ortholog); INVOLVED IN brain renin-angiotensin system (ortholog); cardiac muscle cell apoptotic process (ortholog); cellular response to carbohydrate stimulus (ortholog); PARTICIPATES IN the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); bipolar disorder (ortholog); FOUND IN cytoplasm (ortholog); meiotic spindle (ortholog); nucleoplasm (ortholog) 2 186684234 186828845 - 22301074;30032202 116892806 MODEL JAAIVD010000001;XM_032894681 XP_032750572 ribosomal protein S6 kinase alpha-2 protein-coding 625865683 Map7d2 MAP7 domain containing 2 ENCODES a protein that exhibits kinesin binding (ortholog); microtubule binding (ortholog); microtubule stabilizing activity (ortholog); INVOLVED IN axon development (ortholog); microtubule cytoskeleton organization (ortholog); FOUND IN axon (ortholog); centrosome (ortholog); microtubule (ortholog) X 33768680 33824209 - 22301074;30032202 116888362 MODEL JAAIVD010000014;XM_032889631 XP_032745522 MAP7 domain-containing protein 2 protein-coding 625865701 LOC116914071 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial-like 12 53178706 53179023 + 22301074;30032202 116914071 MODEL JAAIVD010000007;XM_032918378 XP_032774269 protein-coding 625865704 Rabl3 RAB, member of RAS oncogene family like 3 ENCODES a protein that exhibits G protein activity (ortholog); GTP binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN B cell differentiation (ortholog); natural killer cell differentiation (ortholog); positive regulation of cilium assembly (ortholog); ASSOCIATED WITH pancreatic cancer (ortholog) 4 22515387 22543725 + 30032202 116898833 MODEL JAAIVD010000003;XM_032900186 XP_032756077 rab-like protein 3 protein-coding 625865716 Mcm8 minichromosome maintenance 8 homologous recombination repair factor ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); chromatin binding (ortholog); enzyme binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA replication (ortholog); double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH azoospermia (ortholog); genetic disease (ortholog); primary ovarian insufficiency 10 (ortholog); FOUND IN MCM8-MCM9 complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 5 112522930 112553358 + 22301074;30032202 116902008 MODEL JAAIVD010000023;XM_032904275 XP_032760166 DNA helicase MCM8 protein-coding 625865739 LOC116890571 small nucleolar RNA SNORA17 1 72276588 72276710 + 116890571 MODEL JAAIVD010000025 pseudo 625865740 Qrich2 glutamine rich 2 INVOLVED IN flagellated sperm motility (ortholog); negative regulation of ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH spermatogenic failure 35 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); sperm flagellum (ortholog) 9 67624671 67637480 + 116910158 MODEL JAAIVD010000002;XM_032914017 XP_032769908 glutamine-rich protein 2 protein-coding 625865756 LOC116914823 60S ribosomal protein L9-like 13 52262937 52263514 + 116914823 MODEL JAAIVD010000008 pseudo 625865757 Rmi2 RecQ mediated genome instability 2 INVOLVED IN double-strand break repair via homologous recombination (ortholog); regulation of sister chromatid segregation (ortholog); resolution of DNA recombination intermediates (ortholog); FOUND IN nuclear speck (ortholog) 9 11517126 11524086 - 30032202 116910179 MODEL JAAIVD010000002;XM_032914039 XP_032769930 recQ-mediated genome instability protein 2 protein-coding 625865763 Mnat1 MNAT1 component of CDK activating kinase INVOLVED IN adult heart development (ortholog); G1/S transition of mitotic cell cycle (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN CAK-ERCC2 complex (ortholog); chromosome (ortholog); cytoplasm (ortholog) 7 87388057 87530683 + 22301074;30032202 116905159 MODEL JAAIVD010000026;XM_032907934 XP_032763825 CDK-activating kinase assembly factor MAT1 protein-coding 625865775 LOC116904726 small nucleolar RNA SNORA17 6 100784414 100784544 - 116904726 MODEL JAAIVD010000024;XR_004388418 snorna 625865778 LOC116909041 protein SET-like 9 8851509 8853591 - 22301074;30032202 116909041 MODEL JAAIVD010000002;XM_032912522 XP_032768413 protein-coding 625865783 Polr1a RNA polymerase I subunit A ENCODES a protein that exhibits chromatin binding (ortholog); DNA-directed RNA polymerase activity (ortholog); DNA/RNA hybrid binding (ortholog); INVOLVED IN negative regulation of protein localization to nucleolus (ortholog); rRNA transcription (ortholog); transcription by RNA polymerase I (ortholog); PARTICIPATES IN nucleotide excision repair pathway; RNA polymerase I transcription pathway; ASSOCIATED WITH acrofacial dysostosis Cincinnati type (ortholog); genetic disease (ortholog); Hypomyelinating Leukodystrophy 27 (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); fibrillar center (ortholog) 6 74934138 74997846 + 22301074;30032202 116903691 MODEL JAAIVD010000024;XM_032906363 XP_032762254 DNA-directed RNA polymerase I subunit RPA1 protein-coding 625865821 LOC116906806 ribosome biogenesis protein NSA2 homolog 8 22808363 22809115 + 30032202 116906806 MODEL JAAIVD010000027;XM_032909681 XP_032765572 protein-coding 625865825 Lrfn2 leucine rich repeat and fibronectin type III domain containing 2 INVOLVED IN modulation of chemical synaptic transmission (ortholog); regulation of postsynapse organization (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog); postsynapse (ortholog) 4 80831606 80997634 - 22301074;30032202 116899064 MODEL JAAIVD010000003;XM_032900535 XP_032756426 leucine-rich repeat and fibronectin type-III domain-containing protein 2 protein-coding 625865832 Adcy9 adenylate cyclase 9 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); INVOLVED IN adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cAMP biosynthetic process (ortholog); PARTICIPATES IN endothelin signaling pathway; G protein mediated signaling pathway via Galphas family; protein kinase A (PKA) signaling pathway; ASSOCIATED WITH allergic asthma (ortholog); asthma (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); membrane (ortholog) 9 17461910 17587561 + 22301074;30032202 116910448 MODEL JAAIVD010000002;XM_032914298;XM_032914300 XP_032770189;XP_032770191 adenylate cyclase type 9 protein-coding 625865851 LOC116903300 vomeronasal type-2 receptor 26-like 6 23759073 23798495 + 22301074;30032202 116903300 MODEL JAAIVD010000024;XM_032905723 XP_032761614 protein-coding 625865859 Ruvbl2 RuvB like AAA ATPase 2 ENCODES a protein that exhibits ADP binding (ortholog); ATP binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); cellular response to UV (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); euchromatin (ortholog) 2 154074751 154087804 + 22301074;30032202 116892153 MODEL JAAIVD010000001;XM_032893647 XP_032749538 ruvB-like 2 protein-coding 625865877 LOC116886989 ubiquitin-conjugating enzyme E2 N-like 18 49326380 49326929 - 116886989 MODEL JAAIVD010000013 pseudo 625865878 LOC116914640 oogenesin-3-like 13 55118056 55118613 + 30032202 116914640 MODEL JAAIVD010000008;XM_032919034 XP_032774925 protein-coding 625865881 Mrpl11 mitochondrial ribosomal protein L11 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 2 2691224 2694085 - 22301074;30032202 116890750 MODEL JAAIVD010000001;XM_032891206;XR_004386783 XP_032747097 39S ribosomal protein L11, mitochondrial protein-coding 625865892 LOC116915199 small nucleolar RNA SNORA48 13 31365158 31365301 + 116915199 MODEL JAAIVD010000008;XR_004389853 snorna 625865895 LOC116888448 olfactory receptor 1052-like X 112848371 112849294 + 22301074;30032202 116888448 MODEL JAAIVD010000014;XM_032889725 XP_032745616 protein-coding 625865898 LOC116902879 anionic trypsin-2-like 6 99143762 99147426 - 22301074;30032202 116902879 MODEL JAAIVD010000024;XM_032905209 XP_032761100 protein-coding 625865905 LOC116890414 U7 small nuclear RNA 1 57568760 57568821 - 116890414 MODEL JAAIVD010000025;XR_004386615 snrna 625865908 LOC116886746 5S ribosomal RNA 17 43153678 43153796 - 116886746 MODEL JAAIVD010000011;XR_004386150 rrna 625865911 LOC116913871 40S ribosomal protein S11-like 12 11479401 11481700 - 116913871 MODEL JAAIVD010000007 pseudo 625865912 LOC116911964 acetyl-CoA acetyltransferase, cytosolic-like 11 26040694 26042502 - 116911964 MODEL JAAIVD010000006 pseudo 625865913 Ints6 integrator complex subunit 6 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN protein localization to chromatin (ortholog); regulation of transcription elongation by RNA polymerase II (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN chromatin (ortholog); INTAC complex (ortholog); integrator complex (ortholog) 12 61609928 61724024 + 30032202 116913744 MODEL JAAIVD010000007;XM_032918051;XM_032918052;XM_032918053 XP_032773942;XP_032773943;XP_032773944 protein-coding 625865943 Trnak-uuu transfer RNA lysine (anticodon UUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889659 MODEL JAAIVD010000045 trna 625865944 LOC116898053 24-hydroxycholesterol 7-alpha-hydroxylase ENCODES a protein that exhibits steroid 7-alpha-hydroxylase activity (ortholog); INVOLVED IN bile acid biosynthetic process (ortholog); cholesterol catabolic process (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); hepatocellular carcinoma (ortholog) 4 86099363 86175312 - 22301074;30032202 116898053 MODEL JAAIVD010000003;XM_032899445;XM_032899447 XP_032755336;XP_032755338 protein-coding 625865965 Tmem63b transmembrane protein 63B ENCODES a protein that exhibits calcium-activated cation channel activity (ortholog); mechanosensitive monoatomic cation channel activity (ortholog); mechanosensitive monoatomic ion channel activity (ortholog); INVOLVED IN drinking behavior (ortholog); intestinal stem cell homeostasis (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy (ortholog); developmental and epileptic encephalopathy 118 (ortholog); epilepsy (ortholog); FOUND IN actin cytoskeleton (ortholog); alveolar lamellar body membrane (ortholog); early endosome membrane (ortholog) 4 84202464 84230053 + 30032202 116899127 MODEL JAAIVD010000003;XM_032900656;XM_032900657;XM_032900659;XM_032900660 XP_032756547;XP_032756548;XP_032756550;XP_032756551 CSC1-like protein 2 protein-coding 625866000 Cct8 chaperonin containing TCP1 subunit 8 ENCODES a protein that exhibits protein folding chaperone (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); positive regulation of protein localization to Cajal body (ortholog); positive regulation of telomerase RNA localization to Cajal body (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cell body (ortholog); centrosome (ortholog); chaperonin-containing T-complex (ortholog) 4 56367464 56378934 + 22301074;30032202 116899029 MODEL JAAIVD010000003;XM_032900482 XP_032756373 T-complex protein 1 subunit theta protein-coding 625866019 Fam110d family with sequence similarity 110 member D 1 23991450 23992953 + 116894803 MODEL JAAIVD010000025;XM_032896468 XP_032752359 protein FAM110D protein-coding 625866024 LOC116889071 protein transport protein Sec61 subunit gamma-like 1 117763001 117763362 + 22301074;30032202 116889071 MODEL JAAIVD010000025;XM_032890255 XP_032746146 protein-coding 625866029 LOC116888354 ATP-dependent RNA helicase DDX3X X 38836613 38849890 - 22301074;30032202 116888354 MODEL JAAIVD010000014;XM_032889622;XM_032889623 XP_032745513;XP_032745514 protein-coding 625866052 LOC116912019 ubiquitin-conjugating enzyme E2 variant 1-like 11 69940449 69940940 + 116912019 MODEL JAAIVD010000006;XM_032915908 XP_032771799 protein-coding 625866055 LOC116910926 sphingolipid delta(4)-desaturase DES1-like 10 59404498 59409348 + 116910926 MODEL JAAIVD010000005 pseudo 625866056 Stard13 StAR related lipid transfer domain containing 13 INVOLVED IN endothelial cell migration (ortholog); endothelial tube lumen extension (ortholog); negative regulation of cell migration involved in sprouting angiogenesis (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog) 16 579196 789917 - 22301074;30032202 116885308 MODEL JAAIVD010000004;XM_032886562;XM_032886563;XM_032886564;XM_032886565;XM_032886566 XP_032742453;XP_032742454;XP_032742455;XP_032742456;XP_032742457 stAR-related lipid transfer protein 13 protein-coding 625866082 LOC116893436 vomeronasal type-1 receptor 4-like 2 176036424 176037243 + 116893436 MODEL JAAIVD010000001 pseudo 625866083 LOC116884003 spermatogenesis-associated protein 31D3-like 14 78420143 78426024 + 116884003 MODEL JAAIVD010000009;XM_032885239 XP_032741130 protein-coding 625866089 Txlna taxilin alpha INVOLVED IN B cell activation (ortholog); FOUND IN cytoplasm (ortholog) 1 28509001 28523424 + 22301074;30032202 116896058 MODEL JAAIVD010000025;XM_032897053 XP_032752944 alpha-taxilin protein-coding 625866104 LOC116886545 40S ribosomal protein S14-like 17 36035468 36035929 - 116886545 MODEL JAAIVD010000011 pseudo 625866105 Icam1 intercellular adhesion molecule 1 ENCODES a protein that exhibits integrin binding (ortholog); protein-containing complex binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); canonical NF-kappaB signal transduction (ortholog); cell adhesion (ortholog); PARTICIPATES IN eicosanoid signaling pathway; pro-inflammatory cytokine mediated pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular exosome (ortholog) 8 17279224 17290965 + 22301074;30032202 116907803 MODEL JAAIVD010000027;XM_032910948 XP_032766839 protein-coding 625866116 LOC116883250 uncharacterized LOC116883250 14 68903671 68932196 - 116883250 MODEL JAAIVD010000009 pseudo 625866117 Dnm2 dynamin 2 ENCODES a protein that exhibits D2 dopamine receptor binding (ortholog); GTPase activity (ortholog); nitric-oxide synthase binding (ortholog); INVOLVED IN actin filament bundle organization (ortholog); aorta development (ortholog); autophagy (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; syndecan signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH autosomal dominant centronuclear myopathy (ortholog); centronuclear myopathy (ortholog); centronuclear myopathy 1 (ortholog); FOUND IN cell cortex (ortholog); cell junction (ortholog); centriole (ortholog) 8 17696581 17779603 + 22301074;30032202 116907680 MODEL JAAIVD010000027;XM_032910776;XM_032910777;XM_032910778;XM_032910779;XM_032910780;XM_032910781;XM_032910782;XM_032910784;XM_032910785;XM_032910786 XP_032766667;XP_032766668;XP_032766669;XP_032766670;XP_032766671;XP_032766672;XP_032766673;XP_032766675;XP_032766676;XP_032766677 dynamin-2 protein-coding 625866161 LOC116912049 F-box only protein 48-like 11 85462129 85463032 + 116912049 MODEL JAAIVD010000006 pseudo 625866162 Tmem120b transmembrane protein 120B ENCODES a protein that exhibits monoatomic ion channel activity (ortholog); INVOLVED IN fat cell differentiation (ortholog); protein heterooligomerization (ortholog); ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); FOUND IN nuclear inner membrane (ortholog) 16 30704638 30746630 - 30032202 116885317 MODEL JAAIVD010000004;XM_032886578 XP_032742469 protein-coding 625866178 Mcrs1 microspherule protein 1 ENCODES a protein that exhibits G-quadruplex RNA binding (ortholog); poly(G) binding (ortholog); poly(U) RNA binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); negative regulation of telomere maintenance via telomere lengthening (ortholog); positive regulation of DNA repair (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; FOUND IN cytoplasm (ortholog); dendrite (ortholog); histone acetyltransferase complex (ortholog) 1 272048890 272057740 - 22301074;30032202 116885132 MODEL JAAIVD010000025;XM_032886299 XP_032742190 protein-coding 625866197 LOC116896906 la-related protein 1B-like 3 112955740 112988910 - 30032202 116896906 MODEL JAAIVD010000012;XM_032898459;XM_032898461;XM_032898462;XM_032898463 XP_032754350;XP_032754352;XP_032754353;XP_032754354 protein-coding 625866218 LOC116894533 vomeronasal type-2 receptor 116-like 2 176054763 176079283 - 22301074;30032202 116894533 MODEL JAAIVD010000001;XM_032896235;XM_032896236;XM_032896237 XP_032752126;XP_032752127;XP_032752128 protein-coding 625866231 LOC116906968 uncharacterized LOC116906968 8 11345686 11347766 + 116906968 MODEL JAAIVD010000027;XR_004388789 ncrna 625866236 LOC116883201 sperm motility kinase X-like 14 40792872 40794682 - 22301074;30032202 116883201 MODEL JAAIVD010000009;XM_032884230 XP_032740121 protein-coding 625866240 LOC116906480 small nucleolar RNA SNORA17 7 87409844 87409893 - 116906480 MODEL JAAIVD010000026 pseudo 625866241 Radil Rap associating with DIL domain INVOLVED IN substrate adhesion-dependent cell spreading (ortholog); FOUND IN microtubule (ortholog); protein-containing complex (ortholog) 16 10598984 10660048 + 22301074;30032202 116885569 MODEL JAAIVD010000004;XM_032886861 XP_032742752 ras-associating and dilute domain-containing protein protein-coding 625866259 Tmprss4 transmembrane serine protease 4 ENCODES a protein that exhibits serine-type peptidase activity (ortholog); INVOLVED IN negative regulation of growth rate (ortholog); protein processing (ortholog); proteolysis (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Human Influenza (ortholog); FOUND IN extracellular region (ortholog); secretory granule (ortholog) 8 39702948 39735574 - 22301074 116907011 MODEL JAAIVD010000027;XM_032909944;XM_032909945;XM_032909946;XM_032909947 XP_032765835;XP_032765836;XP_032765837;XP_032765838 transmembrane protease serine 4 protein-coding 625866287 LOC116895682 40S ribosomal protein S27-like 3 200952413 200952737 + 116895682 MODEL JAAIVD010000012 pseudo 625866288 Ccdc25 coiled-coil domain containing 25 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN positive regulation of cell motility (ortholog); FOUND IN endomembrane system (ortholog); plasma membrane (ortholog) 12 58575339 58609293 - 116913415 MODEL JAAIVD010000007;XM_032917600 XP_032773491 coiled-coil domain-containing protein 25 protein-coding 625866301 Stc1 stanniocalcin 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN bone development (ortholog); cellular response to cAMP (ortholog); cellular response to glucocorticoid stimulus (ortholog); ASSOCIATED WITH Reperfusion Injury (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); extracellular region (ortholog) 12 55096179 55108212 - 22301074;30032202 116913676 MODEL JAAIVD010000007;XM_032917964 XP_032773855 stanniocalcin-1 protein-coding 625866309 Ak5 adenylate kinase 5 ENCODES a protein that exhibits nucleoside diphosphate kinase activity (ortholog); PARTICIPATES IN de novo purine biosynthetic pathway; ASSOCIATED WITH amphetamine abuse (ortholog); FOUND IN cytosol (ortholog) 3 8968091 9161994 + 22301074;30032202 116896149 MODEL JAAIVD010000012;XM_032897134;XM_032897135 XP_032753025;XP_032753026 adenylate kinase isoenzyme 5 protein-coding 625866332 Fmo5 flavin containing dimethylaniline monoxygenase 5 ENCODES a protein that exhibits monooxygenase activity (ortholog); N,N-dimethylaniline monooxygenase activity (ortholog); INVOLVED IN regulation of cholesterol metabolic process (ortholog); xenobiotic metabolic process (ortholog); FOUND IN endoplasmic reticulum (ortholog) 3 59657196 59684053 - 22301074;30032202 116896487 MODEL JAAIVD010000012;XM_032897657 XP_032753548 dimethylaniline monooxygenase [N-oxide-forming] 5 protein-coding 625866344 LOC116896695 ATP synthase subunit g, mitochondrial-like 3 65229052 65229672 - 116896695 MODEL JAAIVD010000012 pseudo 625866345 Trnai-aau transfer RNA isoleucine (anticodon AAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 155085736 155085809 + 116897676 MODEL JAAIVD010000012 trna 625866346 LOC116904453 non-histone chromosomal protein HMG-14-like 6 128528545 128537919 + 116904453 MODEL JAAIVD010000024 pseudo 625866347 LOC116887509 olfactory receptor 12D2-like 18 10250356 10251282 - 22301074 116887509 MODEL JAAIVD010000013;XM_032889135 XP_032745026 protein-coding 625866350 LOC116904224 60S ribosomal protein L30-like 6 154448580 154448961 - 116904224 MODEL JAAIVD010000024 pseudo 625866351 LOC116911618 mothers against decapentaplegic homolog 2-like 10 28838872 28841106 + 116911618 MODEL JAAIVD010000005 pseudo 625866352 Serbp1 SERPINE1 mRNA binding protein 1 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); ribosome binding (ortholog); RNA binding (ortholog); INVOLVED IN negative regulation of translation (ortholog); PML body organization (ortholog); regulation of apoptotic process (ortholog); ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 6 76814694 76834807 + 30032202 116903710 MODEL JAAIVD010000024;XM_032906383;XM_032906384;XM_032906385;XM_032906386 XP_032762274;XP_032762275;XP_032762276;XP_032762277 plasminogen activator inhibitor 1 RNA-binding protein protein-coding 625866369 Vstm4 V-set and transmembrane domain containing 4 INVOLVED IN endothelial cell migration (ortholog); endothelial cell proliferation (ortholog); retina blood vessel maintenance (ortholog) 13 8581485 8663646 + 116914497 MODEL JAAIVD010000008;XM_032918811 XP_032774702 V-set and transmembrane domain-containing protein 4 protein-coding 625866380 Bloc1s3 biogenesis of lysosomal organelles complex 1 subunit 3 ENCODES a protein that exhibits transmembrane protein transporter activity (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); blood coagulation (ortholog); ASSOCIATED WITH genetic disease (ortholog); Hermansky-Pudlak syndrome (ortholog); Hermansky-Pudlak syndrome 8 (ortholog); FOUND IN BLOC-1 complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 171116453 171118192 + 30032202 116892528 MODEL JAAIVD010000001;XM_032894286;XM_032894287 XP_032750177;XP_032750178 biogenesis of lysosome-related organelles complex 1 subunit 3 protein-coding 625866389 Lypd3 LY6/PLAUR domain containing 3 ENCODES a protein that exhibits laminin binding (ortholog); INVOLVED IN cell-matrix adhesion (ortholog); negative regulation of smooth muscle cell apoptotic process (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) 2 170075343 170079941 - 30032202 116894488 MODEL JAAIVD010000001;XM_032896198 XP_032752089 ly6/PLAUR domain-containing protein 3 protein-coding 625866398 LOC116898543 cilia- and flagella-associated protein 65-like 4 148351878 148353831 - 116898543 MODEL JAAIVD010000003;XM_032899758 XP_032755649 protein-coding 625866403 LOC116886602 40S ribosomal protein S11-like 17 10530251 10530723 - 116886602 MODEL JAAIVD010000011 pseudo 625866404 Ttc12 tetratricopeptide repeat domain 12 INVOLVED IN axonemal dynein complex assembly (ortholog); sperm axoneme assembly (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); alcohol dependence (ortholog); Asthenozoospermia (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog) 8 43923675 43970945 - 22301074 116907875 MODEL JAAIVD010000027;XM_032911062 XP_032766953 tetratricopeptide repeat protein 12 protein-coding 625866430 LOC116907579 40S ribosomal protein S15a-like 8 99661901 99662669 + 116907579 MODEL JAAIVD010000027 pseudo 625866431 Tuba8 tubulin alpha 8 INVOLVED IN spermatid development (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); autosomal dominant isolated macrothrombocytopenia 2 (ortholog); Duane retraction syndrome (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); microtubule cytoskeleton (ortholog) 6 25513840 25530501 - 22301074;30032202 116903320 MODEL JAAIVD010000024;XM_032905755 XP_032761646 tubulin alpha-8 chain protein-coding 625866441 LOC116887238 olfactory receptor 2H2-like 18 10089171 10092850 - 22301074 116887238 MODEL JAAIVD010000013;XM_032888800;XM_032888802 XP_032744691;XP_032744693 protein-coding 625866447 Slc25a33 solute carrier family 25 member 33 ENCODES a protein that exhibits pyrimidine nucleotide transmembrane transporter activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); cellular response to insulin-like growth factor stimulus (ortholog); mitochondria-nucleus signaling pathway (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) 1 10996299 11021663 + 30032202 116892559 MODEL JAAIVD010000025;XM_032894341 XP_032750232 protein-coding 625866458 Gorab golgin, RAB6 interacting ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN hair follicle morphogenesis (ortholog); non-motile cilium assembly (ortholog); positive regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH genetic disease (ortholog); geroderma osteodysplasticum (ortholog); osteoporosis (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); trans-Golgi network (ortholog) 10 42647556 42664278 - 30032202 116911174 MODEL JAAIVD010000005;XM_032915034;XM_032915035;XM_032915036 XP_032770925;XP_032770926;XP_032770927 RAB6-interacting golgin protein-coding 625866473 LOC116883513 histone H1.5 14 41903800 41904851 + 22301074 116883513 MODEL JAAIVD010000009;XM_032884684 XP_032740575 protein-coding 625866478 Lrrc8b leucine rich repeat containing 8 VRAC subunit B ENCODES a protein that exhibits volume-sensitive anion channel activity (ortholog); INVOLVED IN monoatomic anion transmembrane transport (ortholog); FOUND IN cytoplasm (ortholog); monoatomic ion channel complex (ortholog); plasma membrane (ortholog) 11 15149601 15214447 + 22301074 116912778 MODEL JAAIVD010000006;XM_032916936;XM_032916937;XM_032916938;XM_032916940;XM_032916941 XP_032772827;XP_032772828;XP_032772829;XP_032772831;XP_032772832 volume-regulated anion channel subunit LRRC8B protein-coding 625866503 LOC116890138 lymphocyte antigen 6B-like 1 247728839 247731922 + 30032202 116890138 MODEL JAAIVD010000025;XM_032890875 XP_032746766 protein-coding 625866508 LOC116914773 sperm-associated antigen 11-like 13 64988488 64990617 - 22301074;30032202 116914773 MODEL JAAIVD010000008;XM_032919218;XM_032919219 XP_032775109;XP_032775110 protein-coding 625866516 Tmem183a transmembrane protein 183A ASSOCIATED WITH prostate cancer (ortholog) 10 1328305 1345095 + 22301074;30032202 116911084 MODEL JAAIVD010000005;XM_032914870;XM_032914871;XM_032914872 XP_032770761;XP_032770762;XP_032770763 protein-coding 625866533 LOC116900266 olfactory receptor 5M11-like 5 63268453 63269427 + 22301074;30032202 116900266 MODEL JAAIVD010000023;XM_032902018 XP_032757909 protein-coding 625866536 Tshb thyroid stimulating hormone subunit beta INVOLVED IN response to calcium ion (ortholog); response to estrogen (ortholog); response to vitamin A (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); Coma (ortholog); congenital hypothyroidism (ortholog); FOUND IN cytoplasm (ortholog) 3 55313780 55314719 + 22301074;30032202 116895379 MODEL JAAIVD010000012;XM_032896671 XP_032752562 thyrotropin subunit beta protein-coding 625866542 LOC116911590 heterogeneous nuclear ribonucleoproteins C1/C2-like 10 20350667 20351552 + 116911590 MODEL JAAIVD010000005 pseudo 625866543 Eid2b EP300 interacting inhibitor of differentiation 2B ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of myoblast differentiation (ortholog); FOUND IN nucleus (ortholog) 2 167736720 167738534 - 30032202 116892400 MODEL JAAIVD010000001;XM_032894075 XP_032749966 EP300-interacting inhibitor of differentiation 2B protein-coding 625866548 Cacna2d3 calcium voltage-gated channel auxiliary subunit alpha2delta 3 ENCODES a protein that exhibits voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); cellular response to insulin-like growth factor stimulus (ortholog); regulation of presynapse organization (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN GABA-ergic synapse (ortholog); presynaptic active zone membrane (ortholog) 13 4635233 5439935 - 30032202 116914975 MODEL JAAIVD010000008;XM_032919383 XP_032775274 voltage-dependent calcium channel subunit alpha-2/delta-3 protein-coding 625866590 LOC116886734 5S ribosomal RNA 17 43151982 43152100 - 116886734 MODEL JAAIVD010000011;XR_004386143 rrna 625866593 LOC116897467 U7 small nuclear RNA 3 121039835 121039899 + 116897467 MODEL JAAIVD010000012;XR_004387495 snrna 625866596 Trnav-cac transfer RNA valine (anticodon CAC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42399374 42399446 - 116884175 MODEL JAAIVD010000009 trna 625866597 Ypel1 yippee like 1 ASSOCIATED WITH COVID-19 (ortholog) 4 2345322 2358238 + 116898624 MODEL JAAIVD010000003;XM_032899838;XM_032899839 XP_032755729;XP_032755730 protein yippee-like 1 protein-coding 625866609 Dnmbp dynamin binding protein ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN cilium assembly (ortholog); regulation of cell shape (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH cataract 48 (ortholog); FOUND IN cell-cell junction (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 2 43378870 43472696 - 22301074 116891200 MODEL JAAIVD010000001;XM_032892025;XM_032892026 XP_032747916;XP_032747917 dynamin-binding protein protein-coding 625866633 Pou2f2 POU class 2 homeobox 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cell maturation (ortholog); cellular response to virus (ortholog); mature B cell differentiation (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); Gastro-Enteropancreatic Neuroendocrine Tumor (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 2 169531289 169616279 + 22301074;30032202 116892470 MODEL JAAIVD010000001;XM_032894188;XM_032894189;XM_032894190;XM_032894191;XM_032894192;XM_032894194 XP_032750079;XP_032750080;XP_032750081;XP_032750082;XP_032750083;XP_032750085 POU domain, class 2, transcription factor 2 protein-coding 625866665 Serinc4 serine incorporator 4 5 99607636 99613445 - 22301074;30032202 116901867 MODEL JAAIVD010000023;XM_032904067;XM_032904068 XP_032759958;XP_032759959 protein-coding 625866684 Slc7a6 solute carrier family 7 member 6 ENCODES a protein that exhibits arginine binding (ortholog); basic amino acid transmembrane transporter activity (ortholog); L-arginine transmembrane transporter activity (ortholog); INVOLVED IN amino acid import across plasma membrane (ortholog); glycine betaine transport (ortholog); L-arginine transmembrane transport (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; FOUND IN plasma membrane (ortholog) 17 25911548 25935896 + 22301074;30032202 116886198 MODEL JAAIVD010000011;XM_032887579;XM_032887580;XM_032887582;XM_032887583;XM_032887584;XR_004386094 XP_032743470;XP_032743471;XP_032743473;XP_032743474;XP_032743475 Y+L amino acid transporter 2 protein-coding 625866713 LOC116897834 fibroblast growth factor 12-like 4 12153282 12168118 - 22301074;30032202 116897834 MODEL JAAIVD010000003;XM_032899250 XP_032755141 protein-coding 625866718 C10H1orf21 chromosome 10 C1orf21 homolog ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog) 10 31343430 31439697 - 116911071 MODEL JAAIVD010000005;XM_032914843 XP_032770734 uncharacterized protein C1orf21 homolog protein-coding 625866725 Cirsr corepressor of RBPJ and splicing regulator ENCODES a protein that exhibits histone deacetylase binding (ortholog); protein kinase binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN centrosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) 5 50632496 50663205 - 30032202 116901519 MODEL JAAIVD010000023;XM_032903496 XP_032759387 Cir1 corepressor interacting with RBPJ 1;corepressor interacting with RBPJ, CIR1 APPROVED protein-coding 625866739 LOC116890578 small nucleolar RNA SNORA17 1 183435265 183435397 - 116890578 MODEL JAAIVD010000025;XR_004386741 snorna 625866742 Nudt21 nudix hydrolase 21 ENCODES a protein that exhibits chromatin binding (ortholog); histone deacetylase binding (ortholog); identical protein binding (ortholog); INVOLVED IN co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway (ortholog); mRNA 3'-end processing (ortholog); mRNA alternative polyadenylation (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); mRNA cleavage and polyadenylation specificity factor complex (ortholog) 17 928387 948151 - 22301074;30032202 116886570 MODEL JAAIVD010000011;XM_032888091 XP_032743982 cleavage and polyadenylation specificity factor subunit 5 protein-coding 625866753 LOC116902646 U2 spliceosomal RNA 5 22029176 22029304 + 116902646 MODEL JAAIVD010000023 pseudo 625866754 Arhgdig Rho GDP dissociation inhibitor gamma ENCODES a protein that exhibits GDP-dissociation inhibitor activity (ortholog); GTPase regulator activity (ortholog); INVOLVED IN blastocyst hatching (ortholog); regulation of protein localization (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) 9 3459398 3461549 - 22301074;30032202 116910558 MODEL JAAIVD010000002;XM_032914470;XM_032914471 XP_032770361;XP_032770362 rho GDP-dissociation inhibitor 3 protein-coding 625866768 Dkk4 dickkopf WNT signaling pathway inhibitor 4 INVOLVED IN negative regulation of hair follicle placode formation (ortholog); Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway 13 63803549 63806420 - 22301074;30032202 116914471 MODEL JAAIVD010000008;XM_032918770 XP_032774661 dickkopf-related protein 4 protein-coding 625866775 Acadsb acyl-CoA dehydrogenase short/branched chain ENCODES a protein that exhibits acyl-CoA dehydrogenase activity (ortholog); electron transfer activity (ortholog); identical protein binding (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); fatty acid metabolic process (ortholog); L-isoleucine catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH 2-Methylbutyryl-CoA Dehydrogenase Deficiency (ortholog); autistic disorder (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) 2 70397435 70437555 - 22301074;30032202 116891403 MODEL JAAIVD010000001;XM_032892429 XP_032748320 short/branched chain specific acyl-CoA dehydrogenase, mitochondrial protein-coding 625866790 Cnot7 CCR4-NOT transcription complex subunit 7 ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); DNA-binding transcription factor binding (ortholog); piRNA binding (ortholog); INVOLVED IN deadenylation-dependent decapping of nuclear-transcribed mRNA (ortholog); defense response to virus (ortholog); miRNA-mediated gene silencing by mRNA destabilization (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH male infertility (ortholog); FOUND IN CCR4-NOT complex (ortholog); cytoplasm (ortholog); nuclear body (ortholog) 13 46959308 46978336 + 22301074;30032202 116914382 MODEL JAAIVD010000008;XM_032918589;XM_032918590;XM_032918591;XM_032918592;XM_032918593;XM_032918594 XP_032774480;XP_032774481;XP_032774482;XP_032774483;XP_032774484;XP_032774485 protein-coding 625866814 Tln1 talin 1 ENCODES a protein that exhibits integrin binding (ortholog); LIM domain binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN cell-substrate junction assembly (ortholog); cortical actin cytoskeleton organization (ortholog); cortical microtubule organization (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; integrin mediated signaling pathway; ASSOCIATED WITH capillary leak syndrome (ortholog); Neoplasm Invasiveness (ortholog); osteoporosis (ortholog); FOUND IN adherens junction (ortholog); centriolar satellite (ortholog); cytosol (ortholog) 1 2934685 2964721 + 22301074;30032202 116890972 MODEL JAAIVD010000025;XM_032891640;XM_032891647 XP_032747531;XP_032747538 talin-1 protein-coding 625866878 Fgfr1op2 FGFR1 oncogene partner 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN wound healing (ortholog); ASSOCIATED WITH myeloid neoplasm (ortholog); FOUND IN cytoplasm (ortholog) 6 4253240 4274375 + 30032202 116903089 MODEL JAAIVD010000024;XM_032905409;XM_032905410 XP_032761300;XP_032761301 protein-coding 625866890 Mtfr2 mitochondrial fission regulator 2 INVOLVED IN aerobic respiration (ortholog); mitochondrial fission (ortholog); mitochondrion organization (ortholog); FOUND IN mitochondrion (ortholog) 2 216222329 216237413 - 30032202 116892973 MODEL JAAIVD010000001;XM_032894931 XP_032750822 protein-coding 625866902 Upk3b uroplakin 3B INVOLVED IN negative regulation of D-glucose import across plasma membrane (ortholog); ASSOCIATED WITH COVID-19 (ortholog) 16 17969421 17975887 - 116885608 MODEL JAAIVD010000004;XM_032886909 XP_032742800 uroplakin-3b protein-coding 625866912 Pou2f1 POU class 2 homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN lens induction in camera-type eye (ortholog); liver regeneration (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN forkhead class A signaling pathway; RNA polymerase III transcription pathway; FOUND IN nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog); transcription regulator complex (ortholog) 10 44968725 45107130 - 22301074;30032202 116911380 MODEL JAAIVD010000005;XM_032915322;XM_032915323;XM_032915324;XM_032915325;XM_032915326;XM_032915327;XM_032915328;XM_032915329;XM_032915330;XR_004389324 XP_032771213;XP_032771214;XP_032771215;XP_032771216;XP_032771217;XP_032771218;XP_032771219;XP_032771220;XP_032771221 POU domain, class 2, transcription factor 1 protein-coding 625866960 LOC116906423 small nucleolar RNA SNORA19 7 82996686 82996817 - 116906423 MODEL JAAIVD010000026;XR_004388685 snorna 625866963 LOC116886678 disks large homolog 5-like 17 14769295 14773995 + 116886678 MODEL JAAIVD010000011;XM_032888169 XP_032744060 protein-coding 625866973 Stbd1 starch binding domain 1 ENCODES a protein that exhibits cargo receptor activity (ortholog); enzyme binding (ortholog); glycogen binding (ortholog); INVOLVED IN glycogen catabolic process (ortholog); glycophagy (ortholog); lysosomal transport (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog); perinuclear region of cytoplasm (ortholog) 11 5428813 5432229 + 22301074;30032202 116912563 MODEL JAAIVD010000006;XM_032916666 XP_032772557 starch-binding domain-containing protein 1 protein-coding 625866979 Sntg2 syntrophin gamma 2 ENCODES a protein that exhibits neuroligin family protein binding (ortholog); PDZ domain binding (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); High Myopia (ortholog); FOUND IN plasma membrane (ortholog) 7 43591052 43793776 - 22301074;30032202 116904939 MODEL JAAIVD010000026;XM_032907580;XM_032907581 XP_032763471;XP_032763472 gamma-2-syntrophin protein-coding 625867004 LOC116911978 sperm motility kinase-like 11 41795882 41809011 + 116911978 MODEL JAAIVD010000006 pseudo 625867005 Akap6 A-kinase anchoring protein 6 ENCODES a protein that exhibits adenylate cyclase binding (ortholog); enzyme binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN action potential (ortholog); cAMP/PKA signal transduction (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH anorexia nervosa (ortholog); atrial fibrillation (ortholog); congestive heart failure (ortholog); FOUND IN calcium channel complex (ortholog); caveola (ortholog); cytoplasm (ortholog) 7 66154586 66546220 + 30032202 116905044 MODEL JAAIVD010000026;XM_032907724;XM_032907725 XP_032763615;XP_032763616 A-kinase anchor protein 6 protein-coding 625867025 Arhgap31 Rho GTPase activating protein 31 ENCODES a protein that exhibits GTPase activator activity (ortholog); SH3 domain binding (ortholog); INVOLVED IN small GTPase-mediated signal transduction (ortholog); ASSOCIATED WITH Adams-Oliver syndrome (ortholog); Adams-Oliver Syndrome 1 (ortholog); cerebral palsy (ortholog); FOUND IN lamellipodium (ortholog) 4 23542762 23656029 - 30032202 116898849 MODEL JAAIVD010000003;XM_032900203 XP_032756094 rho GTPase-activating protein 31 protein-coding 625867041 Jpt2 Jupiter microtubule associated homolog 2 INVOLVED IN endocytosis involved in viral entry into host cell (ortholog); regulation of calcium-mediated signaling (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 9 2222254 2240474 - 30032202 116909383 MODEL JAAIVD010000002;XM_032912938;XM_032912939 XP_032768829;XP_032768830 protein-coding 625867053 Tmem214 transmembrane protein 214 ASSOCIATED WITH autistic disorder (ortholog); Contracture (ortholog); FOUND IN cytoplasmic microtubule (ortholog); endoplasmic reticulum (ortholog) 7 23207139 23216153 - 30032202 116905998 MODEL JAAIVD010000026;XM_032909036 XP_032764927 protein-coding 625867074 LOC116900467 uncharacterized LOC116900467 1 116455585 116513982 + 116900467 MODEL JAAIVD010000025 pseudo 625867075 LOC116904481 uncharacterized LOC116904481 6 142148887 142252958 + 116904481 MODEL JAAIVD010000024 pseudo 625867076 LOC116897915 UBX domain-containing protein 2A 4 39552703 39553630 - 30032202 116897915 MODEL JAAIVD010000003;XM_032899316 XP_032755207 protein-coding 625867081 LOC116898062 40S ribosomal protein S27-like 4 87712558 87712865 + 22301074;30032202 116898062 MODEL JAAIVD010000003;XM_032899458 XP_032755349 protein-coding 625867085 Fblim1 filamin binding LIM protein 1 ENCODES a protein that exhibits filamin binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); regulation of integrin activation (ortholog); PARTICIPATES IN integrin mediated signaling pathway; FOUND IN cell junction (ortholog); cell periphery (ortholog); cytoplasm (ortholog) 1 16546267 16574574 + 30032202 116893315 MODEL JAAIVD010000025;XM_032895138;XM_032895143;XM_032895147 XP_032751029;XP_032751034;XP_032751038 filamin-binding LIM protein 1 protein-coding 625867102 LOC116903796 uncharacterized LOC116903796 6 88797085 88801650 - 116903796 MODEL JAAIVD010000024;XR_004388295 ncrna 625867107 Nedd4l NEDD4 like E3 ubiquitin protein ligase ENCODES a protein that exhibits potassium channel inhibitor activity (ortholog); sodium channel inhibitor activity (ortholog); sodium channel regulator activity (ortholog); INVOLVED IN negative regulation of potassium ion export across plasma membrane (ortholog); negative regulation of potassium ion transmembrane transport (ortholog); negative regulation of protein localization to cell surface (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); cleft palate (ortholog); Developmental Disease (ortholog); FOUND IN apical plasma membrane (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) 15 66057102 66380876 - 22301074;30032202 116884299 MODEL JAAIVD010000010;XM_032885399 XP_032741290 E3 ubiquitin-protein ligase NEDD4-like protein-coding 625867142 LOC116887775 small nucleolar RNA SNORD52 18 7546332 7546397 - 116887775 MODEL JAAIVD010000013;XR_004386272 snorna 625867145 Znf32 zinc finger protein 32 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); FOUND IN nucleus (ortholog) 6 28891579 28895914 - 30032202 116903357 MODEL JAAIVD010000024;XM_032905830 XP_032761721 protein-coding 625867152 LOC116894304 inactive hydroxysteroid dehydrogenase-like protein 1 2 141377889 141378868 + 116894304 MODEL JAAIVD010000001 pseudo 625867153 Pla2g12a phospholipase A2 group XIIA ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) 3 29409425 29425128 - 22301074;30032202 116896262 MODEL JAAIVD010000012;XM_032897338 XP_032753229 group XIIA secretory phospholipase A2 protein-coding 625867161 Trnaq-uug transfer RNA glutamine (anticodon UUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41454033 41454104 - 116884158 MODEL JAAIVD010000009 trna 625867162 Tut7 terminal uridylyl transferase 7 ENCODES a protein that exhibits miRNA binding (ortholog); RNA uridylyltransferase activity (ortholog); uridylyltransferase activity (ortholog); INVOLVED IN histone mRNA catabolic process (ortholog); miRNA metabolic process (ortholog); oocyte maturation (ortholog); PARTICIPATES IN microRNA pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog) 14 78304534 78358921 + 22301074;30032202 116883815 MODEL JAAIVD010000009;XM_032885065 XP_032740956 terminal uridylyltransferase 7 protein-coding 625867195 Foxo4 forkhead box O4 ENCODES a protein that exhibits beta-catenin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN insulin receptor signaling pathway (ortholog); mitotic G2 DNA damage checkpoint signaling (ortholog); negative regulation of angiogenesis (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase-Akt signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH alcohol-induced mental disorder (ortholog); gastric ulcer (ortholog); hemangioma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) X 59282133 59288854 - 30032202 116888817 MODEL JAAIVD010000014;XM_032890096 XP_032745987 forkhead box protein O4 protein-coding 625867202 Tbkbp1 TBK1 binding protein 1 ASSOCIATED WITH ankylosing spondylitis (ortholog) 9 57241284 57254635 + 30032202 116909344 MODEL JAAIVD010000002;XM_032912893;XM_032912894 XP_032768784;XP_032768785 TANK-binding kinase 1-binding protein 1 protein-coding 625867217 LOC116900645 cytochrome c, somatic-like 5 111646346 111646660 + 22301074;30032202 116900645 MODEL JAAIVD010000023;XM_032902355 XP_032758246 protein-coding 625867220 LOC116914684 fructose-bisphosphate aldolase A-like 13 43108601 43109741 - 116914684 MODEL JAAIVD010000008 pseudo 625867221 LOC116894196 olfactory receptor 490-like 2 106198049 106198993 - 22301074;30032202 116894196 MODEL JAAIVD010000001;XM_032895909 XP_032751800 protein-coding 625867224 LOC116907819 olfactory receptor 145-like 8 31763402 31764341 + 116907819 MODEL JAAIVD010000027 pseudo 625867225 LOC116890128 60S ribosomal protein L29-like 1 247382535 247382936 + 22301074;30032202 116890128 MODEL JAAIVD010000025;XM_032890866 XP_032746757 protein-coding 625867228 LOC116887851 dystrophin-like X 42122163 42354377 - 22301074;30032202 116887851 MODEL JAAIVD010000014;XM_032889355 XP_032745246 protein-coding 625867239 G3bp2 G3BP stress granule assembly factor 2 ENCODES a protein that exhibits molecular condensate scaffold activity (ortholog); INVOLVED IN protein homooligomerization (ortholog); stress granule assembly (ortholog); FOUND IN cytoplasmic stress granule (ortholog); cytosol (ortholog) 11 4886698 4917216 - 30032202 116912425 MODEL JAAIVD010000006;XM_032916493 XP_032772384 ras GTPase-activating protein-binding protein 2 protein-coding 625867255 Igfbpl1 insulin like growth factor binding protein like 1 INVOLVED IN cellular response to tumor cell (ortholog); FOUND IN extracellular region (ortholog) 1 676058 691653 + 22301074;30032202 116885718 MODEL JAAIVD010000025;XM_032887030 XP_032742921 insulin-like growth factor-binding protein-like 1 protein-coding 625867264 LOC116889474 small nucleolar RNA SNORA36 family X 102950557 102950688 + 116889474 MODEL JAAIVD010000014;XR_004386426 snorna 625867267 LOC116902027 L-lactate dehydrogenase A chain-like 5 119072068 119073161 - 22301074 116902027 MODEL JAAIVD010000023;XM_032904303 XP_032760194 protein-coding 625867272 Trnar-ucu transfer RNA arginine (anticodon UCU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 48723533 48723621 - 116910839 MODEL JAAIVD010000002 trna 625867273 Sec14l2 SEC14 like lipid binding 2 ENCODES a protein that exhibits enzyme activator activity (ortholog); transferase activity, transferring alkyl or aryl (other than methyl) groups (ortholog); INVOLVED IN positive regulation of cholesterol biosynthetic process (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 11 73085152 73104936 - 30032202 116912369 MODEL JAAIVD010000006;XM_032916428;XM_032916429 XP_032772319;XP_032772320 SEC14-like protein 2 protein-coding 625867292 LOC116887782 small nucleolar RNA SNORA4 18 35520821 35520967 - 116887782 MODEL JAAIVD010000013;XR_004386279 snorna 625867295 LOC116908413 small nucleolar RNA SNORA17 8 94322236 94322363 - 116908413 MODEL JAAIVD010000027;XR_004388953 snorna 625867298 Nt5c2 5'-nucleotidase, cytosolic II ENCODES a protein that exhibits 5'-nucleotidase activity (ortholog); ATP binding (ortholog); identical protein binding (ortholog); INVOLVED IN adenosine metabolic process (ortholog); allantoin metabolic process (ortholog); dGMP catabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 2 46358619 46538231 - 30032202 116891258 MODEL JAAIVD010000001;XM_032892141;XM_032892142;XM_032892143;XM_032892144 XP_032748032;XP_032748033;XP_032748034;XP_032748035 cytosolic purine 5'-nucleotidase protein-coding 625867331 LOC116889472 small nucleolar RNA SNORD61 X 117827515 117827585 - 116889472 MODEL JAAIVD010000014;XR_004386424 snorna 625867334 Cmklr2 chemerin chemokine-like receptor 2 ENCODES a protein that exhibits adipokinetic hormone binding (ortholog); adipokinetic hormone receptor activity (ortholog); INVOLVED IN glucose homeostasis (ortholog); FOUND IN plasma membrane (ortholog) 4 137170710 137171809 - 22301074;30032202 116898196 MODEL JAAIVD010000003;XM_032899559 XP_032755450 Gpr1 G protein-coupled receptor 1;G-protein coupled receptor 1 protein-coding 625867338 LOC116887744 small Cajal body-specific RNA 14 18 4822877 4822957 + 116887744 MODEL JAAIVD010000013;XR_004386250 ncrna 625867341 Bmp5 bone morphogenetic protein 5 ENCODES a protein that exhibits BMP receptor binding (ortholog); INVOLVED IN allantois development (ortholog); anterior head development (ortholog); BMP signaling pathway (ortholog); ASSOCIATED WITH Congenital Microtia (ortholog); Meier-Gorlin syndrome (ortholog); FOUND IN extracellular region (ortholog); vesicle (ortholog) 8 70038275 70164632 + 22301074;30032202 116907231 MODEL JAAIVD010000027;XM_032910196;XM_032910197 XP_032766087;XP_032766088 protein-coding 625867351 LOC116904512 thymosin beta-10-like 6 6149091 6149337 - 22301074;30032202 116904512 MODEL JAAIVD010000024;XM_032907302 XP_032763193 protein-coding 625867355 Edrf1 erythroid differentiation regulatory factor 1 INVOLVED IN positive regulation of DNA-templated transcription (ortholog) 2 68203772 68240806 - 30032202 116891388 MODEL JAAIVD010000001;XM_032892404;XM_032892405;XM_032892406 XP_032748295;XP_032748296;XP_032748297 erythroid differentiation-related factor 1 protein-coding 625867389 Ncl nucleolin ENCODES a protein that exhibits calcium ion binding (ortholog); DNA topoisomerase binding (ortholog); ErbB-4 class receptor binding (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to epidermal growth factor stimulus (ortholog); cellular response to leukemia inhibitory factor (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH Animal Disease Models (ortholog); autistic disorder (ortholog); Left Ventricular Hypertrophy (ortholog); FOUND IN cell cortex (ortholog); cell surface (ortholog); chromosome (ortholog) 4 158486212 158494452 - 22301074;30032202 116899589 MODEL JAAIVD010000003;XM_032901530 XP_032757421 protein-coding 625867407 Lenep lens epithelial protein 3 64264838 64265514 + 22301074;30032202 116896644 MODEL JAAIVD010000012;XM_032897965 XP_032753856 lens epithelial cell protein LEP503 protein-coding 625867413 Tex29 testis expressed 29 13 71993929 72007987 - 116915111 MODEL JAAIVD010000008;XM_032919541 XP_032775432 testis-expressed protein 29 protein-coding 625867423 LOC116911551 voltage-dependent L-type calcium channel subunit alpha-1S-like 10 6628657 6634474 - 22301074;30032202 116911551 MODEL JAAIVD010000005;XM_032915541 XP_032771432 protein-coding 625867433 Npc2 NPC intracellular cholesterol transporter 2 ENCODES a protein that exhibits cholesterol binding (ortholog); cholesterol transfer activity (ortholog); enzyme binding (ortholog); INVOLVED IN cholesterol efflux (ortholog); cholesterol homeostasis (ortholog); cholesterol storage (ortholog); ASSOCIATED WITH genetic disease (ortholog); Niemann-Pick disease (ortholog); Niemann-Pick disease type A (ortholog); FOUND IN extracellular region (ortholog); late endosome (ortholog); lysosomal lumen (ortholog) 7 98860259 98881423 - 22301074;30032202 116905278 MODEL JAAIVD010000026;XM_032908137 XP_032764028 protein-coding 625867441 Sebox SEBOX homeobox INVOLVED IN embryo development ending in birth or egg hatching (ortholog); oogenesis (ortholog) 9 91938213 91939227 - 22301074 116910418 MODEL JAAIVD010000002;XM_032914261 XP_032770152 homeobox protein SEBOX protein-coding 625867447 Rpl22 ribosomal protein L22 ENCODES a protein that exhibits heparin binding (ortholog); identical protein binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN alpha-beta T cell differentiation (ortholog); translation at presynapse (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog) 1 8407117 8415703 - 22301074;30032202 116892256 MODEL JAAIVD010000025;XM_032893840 XP_032749731 60S ribosomal protein L22 protein-coding 625867455 LOC116906038 probable glutathione peroxidase 8 7 40076592 40108232 - 116906038 MODEL JAAIVD010000026 pseudo 625867456 Mylk myosin light chain kinase ENCODES a protein that exhibits enzyme binding (ortholog); myosin light chain kinase activity (ortholog); scaffold protein binding (ortholog); INVOLVED IN aorta smooth muscle tissue morphogenesis (ortholog); bleb assembly (ortholog); cellular hypotonic response (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); adult respiratory distress syndrome (ortholog); allergic disease (ortholog); FOUND IN actin cytoskeleton (ortholog); cell-cell junction (ortholog); cleavage furrow (ortholog) 4 19595180 19775758 + 22301074 116898803 MODEL JAAIVD010000003;XM_032900154 XP_032756045 myosin light chain kinase, smooth muscle protein-coding 625867491 Ift88 intraflagellar transport 88 ENCODES a protein that exhibits kinesin binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); brain development (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); autosomal recessive polycystic kidney disease (ortholog); basal cell carcinoma (ortholog); FOUND IN acrosomal membrane (ortholog); axonemal basal plate (ortholog); axoneme (ortholog) 12 67310745 67402944 - 30032202 116913310 MODEL JAAIVD010000007;XM_032917447;XM_032917448;XM_032917449;XM_032917450 XP_032773338;XP_032773339;XP_032773340;XP_032773341 intraflagellar transport protein 88 homolog protein-coding 625867529 LOC116892966 zinc finger protein 431-like 1 12930236 12936936 + 22301074;30032202 116892966 MODEL JAAIVD010000025;XM_032894920 XP_032750811 protein-coding 625867537 C11H5orf52 chromosome 11 C5orf52 homolog 11 72899163 72905954 - 116912072 MODEL JAAIVD010000006;XM_032915936 XP_032771827 uncharacterized protein C5orf52 homolog protein-coding 625867544 LOC116905834 importin subunit alpha-1-like 7 106772040 106773669 - 116905834 MODEL JAAIVD010000026 pseudo 625867545 KEG97_t13 tRNA-Asp MT 6930 6997 + 64988245 trna 625867546 LOC116888952 40S ribosomal protein S17-like X 44950121 44950526 - 116888952 MODEL JAAIVD010000014 pseudo 625867547 Gprc5c G protein-coupled receptor class C group 5 member C FOUND IN plasma membrane (ortholog); signaling receptor complex (ortholog) 9 74448196 74470113 - 22301074;30032202 116909752 MODEL JAAIVD010000002;XM_032913432;XM_032913433;XM_032913435;XM_032913436;XM_032913437;XM_032913438 XP_032769323;XP_032769324;XP_032769326;XP_032769327;XP_032769328;XP_032769329 G-protein coupled receptor family C group 5 member C protein-coding 625867573 LOC116914392 histone deacetylase 1-like 1 187489791 187493328 + 116914392 MODEL JAAIVD010000025 pseudo 625867574 Tuft1 tuftelin 1 ENCODES a protein that exhibits structural constituent of skin epidermis (ortholog); ASSOCIATED WITH genetic disease (ortholog); palmoplantar keratoderma and woolly hair (ortholog); palmoplantar keratosis (ortholog); FOUND IN cytoplasm (ortholog) 3 62507972 62553328 + 30032202 116896582 MODEL JAAIVD010000012;XM_032897808;XM_032897809 XP_032753699;XP_032753700 tuftelin protein-coding 625867594 LOC116912435 heterogeneous nuclear ribonucleoprotein F-like 11 13368009 13369983 + 22301074;30032202 116912435 MODEL JAAIVD010000006;XM_032916503 XP_032772394 protein-coding 625867599 LOC116910079 angiotensin-converting enzyme-like protein Ace3 9 73102332 73116505 - 22301074;30032202 116910079 MODEL JAAIVD010000002;XM_032913895 XP_032769786 protein-coding 625867618 Pcsk1 proprotein convertase subtilisin/kexin type 1 ENCODES a protein that exhibits endopeptidase activity (ortholog); identical protein binding (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN insulin processing (ortholog); neurogenesis (ortholog); pancreas development (ortholog); PARTICIPATES IN altered energy homeostasis pathway; altered melanocortin system pathway; melanocortin system pathway; ASSOCIATED WITH Body Weight (ortholog); Dehydration (ortholog); Dwarfism (ortholog); FOUND IN axon terminus (ortholog); dendrite (ortholog); extracellular region (ortholog) 3 221645815 221689571 - 22301074;30032202 116897365 MODEL JAAIVD010000012;XM_032899124 XP_032755015 neuroendocrine convertase 1 protein-coding 625867636 Nfatc2 nuclear factor of activated T cells 2 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); calcineurin-NFAT signaling cascade (ortholog); cartilage development (ortholog); PARTICIPATES IN calcineurin signaling pathway; nuclear factor of activated T-cells signaling pathway; Wnt signaling, non-canonical pathway; ASSOCIATED WITH dilated cardiomyopathy 1A (ortholog); JOINT CONTRACTURES, OSTEOCHONDROMAS, AND B-CELL LYMPHOMA (ortholog); nervous system disease (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 5 149394076 149523168 + 30032202 116902298 MODEL JAAIVD010000023;XM_032904736;XM_032904737;XM_032904738 XP_032760627;XP_032760628;XP_032760629 nuclear factor of activated T-cells, cytoplasmic 2 protein-coding 625867656 LOC116898247 40S ribosomal protein S10-like 4 157914482 157914972 - 116898247 MODEL JAAIVD010000003 pseudo 625867657 LOC116907154 olfactory receptor 8B3-like 8 32196284 32197213 + 22301074;30032202 116907154 MODEL JAAIVD010000027;XM_032910116 XP_032766007 protein-coding 625867660 Castor1 cytosolic arginine sensor for mTORC1 subunit 1 ENCODES a protein that exhibits arginine binding (ortholog); identical protein binding (ortholog); molecular sensor activity (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to L-arginine (ortholog); negative regulation of TORC1 signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN cytosol (ortholog); GATOR2 complex (ortholog) 11 73198263 73202928 + 30032202 116912248 MODEL JAAIVD010000006;XM_032916231 XP_032772122 protein-coding 625867674 LOC116884110 U4 spliceosomal RNA 14 54839472 54839610 + 116884110 MODEL JAAIVD010000009;XR_004385841 snrna 625867677 Ncoa3 nuclear receptor coactivator 3 ENCODES a protein that exhibits chromatin binding (ortholog); disordered domain specific binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell dedifferentiation (ortholog); cellular response to estradiol stimulus (ortholog); cerebellum development (ortholog); PARTICIPATES IN androgen signaling pathway; cortisol signaling pathway; estrogen signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Bone Neoplasms (ortholog); breast cancer (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 5 151889903 151931166 - 22301074;30032202 116902326 MODEL JAAIVD010000023;XM_032904776;XM_032904777;XM_032904778;XM_032904780 XP_032760667;XP_032760668;XP_032760669;XP_032760671 protein-coding 625867714 Aven apoptosis and caspase activation inhibitor INVOLVED IN negative regulation of apoptotic process (ortholog); ASSOCIATED WITH generalized epilepsy (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN membrane (ortholog) 5 90820016 90946043 + 30032202 116901749 MODEL JAAIVD010000023;XM_032903889 XP_032759780 cell death regulator Aven protein-coding 625867724 Catsperd cation channel sperm associated auxiliary subunit delta INVOLVED IN flagellated sperm motility (ortholog); sperm capacitation (ortholog); spermatogenesis (ortholog); FOUND IN CatSper complex (ortholog); sperm principal piece (ortholog) 4 88012493 88039595 + 22301074;30032202 116899189 MODEL JAAIVD010000003;XM_032900769 XP_032756660 cation channel sperm-associated protein subunit delta protein-coding 625867743 LOC116900768 60S ribosomal protein L13-like 5 153230323 153230948 - 116900768 MODEL JAAIVD010000023 pseudo 625867744 LOC116898145 protein transport protein Sec61 subunit gamma-like 4 115257960 115258176 - 22301074;30032202 116898145 MODEL JAAIVD010000003;XM_032899523 XP_032755414 protein-coding 625867748 LOC116906519 U4 spliceosomal RNA 7 60943227 60943309 + 116906519 MODEL JAAIVD010000026 pseudo 625867749 LOC116912678 zinc finger protein 120-like 11 14884607 14895410 - 22301074;30032202 116912678 MODEL JAAIVD010000006;XM_032916795 XP_032772686 protein-coding 625867755 LOC116902585 small nucleolar RNA SNORA17 5 90332763 90332890 + 116902585 MODEL JAAIVD010000023;XR_004388177 snorna 625867758 Rpl10 ribosomal protein L10 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); translation regulator activity (ortholog); INVOLVED IN cytoplasmic translation (ortholog); embryonic brain development (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosol (ortholog) X 128274210 128276314 + 22301074;30032202 116888844 MODEL JAAIVD010000014;XM_032890113 XP_032746004 60S ribosomal protein L10 protein-coding 625867768 LOC116891656 uncharacterized LOC116891656 2 90542404 90547002 - 116891656 MODEL JAAIVD010000001;XR_004386855 ncrna 625867773 LOC116888044 60S ribosomal protein L31-like X 86617968 86619294 - 116888044 MODEL JAAIVD010000014 pseudo 625867774 LOC116894609 leukocyte-associated immunoglobulin-like receptor 1 2 184917846 184919850 + 116894609 MODEL JAAIVD010000001;XM_032896325 XP_032752216 protein-coding 625867783 Plppr1 phospholipid phosphatase related 1 ENCODES a protein that exhibits lysophosphatidic acid phosphatase activity (ortholog); INVOLVED IN nervous system development (ortholog); phospholipid dephosphorylation (ortholog); ASSOCIATED WITH visual epilepsy (ortholog); FOUND IN neuron projection (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 7 57455622 57578205 - 30032202 116905004 MODEL JAAIVD010000026;XM_032907689 XP_032763580 phospholipid phosphatase-related protein type 1 protein-coding 625867794 Ctsh cathepsin H ENCODES a protein that exhibits aminopeptidase activity (ortholog); cysteine-type endopeptidase activator activity involved in apoptotic process (ortholog); cysteine-type endopeptidase activity (ortholog); INVOLVED IN adaptive immune response (ortholog); bradykinin catabolic process (ortholog); cellular response to thyroid hormone stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); Contusions (ortholog); FOUND IN acrosomal vesicle (ortholog); alveolar lamellar body (ortholog); axoneme (ortholog) 12 5281772 5300233 + 30032202 116913647 MODEL JAAIVD010000007;XM_032917916 XP_032773807 pro-cathepsin H protein-coding 625867810 Sema5a semaphorin 5A ENCODES a protein that exhibits axon guidance receptor activity (ortholog); chondroitin sulfate proteoglycan binding (ortholog); heparan sulfate proteoglycan binding (ortholog); INVOLVED IN axon extension (ortholog); axon guidance (ortholog); axonal fasciculation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Charcot-Marie-Tooth disease (ortholog); intellectual disability (ortholog); FOUND IN membrane (ortholog) 3 148146000 148579266 - 30032202 116897044 MODEL JAAIVD010000012;XM_032898665;XM_032898666 XP_032754556;XP_032754557 semaphorin-5A protein-coding 625867840 LOC116897460 U1 spliceosomal RNA 3 149653696 149653856 + 116897460 MODEL JAAIVD010000012;XR_004387490 snrna 625867843 Hnmt histamine N-methyltransferase ENCODES a protein that exhibits histamine N-methyltransferase activity (ortholog); N-methyltransferase activity (ortholog); INVOLVED IN histamine catabolic process (ortholog); histamine metabolic process (ortholog); hyperosmotic response (ortholog); PARTICIPATES IN histidine metabolic pathway; histidinemia pathway; homocysteine metabolic pathway; ASSOCIATED WITH atopic dermatitis (ortholog); autistic disorder (ortholog); autosomal recessive intellectual developmental disorder 51 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 5 33547298 33580148 - 22301074 116901420 MODEL JAAIVD010000023;XM_032903308 XP_032759199 protein-coding 625867853 Wdr24 WD repeat domain 24 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to nutrient levels (ortholog); positive regulation of protein kinase activity (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN GATOR2 complex (ortholog); lysosomal membrane (ortholog) 9 3089144 3094267 + 22301074;30032202 116908688 MODEL JAAIVD010000002;XM_032912002 XP_032767893 GATOR complex protein WDR24 protein-coding 625867866 LOC116895726 CCR4-NOT transcription complex subunit 8-like 3 223039033 223039893 - 116895726 MODEL JAAIVD010000012 pseudo 625867867 LOC116889838 bifunctional purine biosynthesis protein PURH-like 1 150968117 150969886 - 116889838 MODEL JAAIVD010000025 pseudo 625867868 LOC116912426 uncharacterized LOC116912426 11 4941540 4969931 - 116912426 MODEL JAAIVD010000006;XR_004389460 ncrna 625867872 Spata6 spermatogenesis associated 6 ENCODES a protein that exhibits myosin light chain binding (ortholog); INVOLVED IN motile cilium assembly (ortholog); spermatogenesis (ortholog); FOUND IN sperm head-tail coupling apparatus (ortholog) 1 44391810 44474761 + 30032202 116898929 MODEL JAAIVD010000025;XM_032900342 XP_032756233 spermatogenesis-associated protein 6 protein-coding 625867889 LOC116906272 small nuclear ribonucleoprotein E-like 7 127619812 127620807 + 22301074;30032202 116906272 MODEL JAAIVD010000026;XM_032909161 XP_032765052 protein-coding 625867893 Rps6kb1 ribosomal protein S6 kinase B1 ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN behavioral fear response (ortholog); cell migration (ortholog); cellular response to dexamethasone stimulus (ortholog); PARTICIPATES IN insulin signaling pathway; insulin-like growth factor signaling pathway; interleukin-4 signaling pathway; ASSOCIATED WITH Atrophy (ortholog); autosomal dominant polycystic kidney disease (ortholog); Burns (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) 9 84229507 84272843 + 22301074;30032202 116910499 MODEL JAAIVD010000002;XM_032914392;XM_032914393;XR_004389154;XR_004389155;XR_004389156 XP_032770283;XP_032770284 ribosomal protein S6 kinase beta-1 protein-coding 625867927 Slc15a3 solute carrier family 15 member 3 ENCODES a protein that exhibits dipeptide transmembrane transporter activity (ortholog); peptidoglycan transmembrane transporter activity (ortholog); INVOLVED IN dipeptide import across plasma membrane (ortholog); peptidoglycan transport (ortholog); positive regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN endosome membrane (ortholog); lysosomal membrane (ortholog) 2 10323207 10337934 + 22301074;30032202 116890970 MODEL JAAIVD010000001;XM_032891635 XP_032747526 protein-coding 625867939 LOC116911259 60 kDa heat shock protein, mitochondrial-like 10 74646460 74648204 + 22301074;30032202 116911259 MODEL JAAIVD010000005;XM_032915162 XP_032771053 protein-coding 625867944 Ppil6 peptidylprolyl isomerase like 6 ENCODES a protein that exhibits peptidyl-prolyl cis-trans isomerase activity (ortholog) 18 41183334 41213820 + 22301074 116886947 MODEL JAAIVD010000013;XM_032888446;XM_032888447 XP_032744337;XP_032744338 probable inactive peptidyl-prolyl cis-trans isomerase-like 6 protein-coding 625867957 LOC116909210 dedicator of cytokinesis protein 2-like 9 7043377 7125531 - 22301074;30032202 116909210 MODEL JAAIVD010000002;XM_032912712 XP_032768603 protein-coding 625867985 LOC116886720 small nucleolar RNA SNORA65 17 16270438 16270567 + 116886720 MODEL JAAIVD010000011;XR_004386132 snorna 625867988 Atad2 ATPase family AAA domain containing 2 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 1 232640244 232682381 - 22301074;30032202 116911726 MODEL JAAIVD010000025;XM_032915705;XM_032915712 XP_032771596;XP_032771603 ATPase family AAA domain-containing protein 2 protein-coding 625868025 Timm17b translocase of inner mitochondrial membrane 17B FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); TIM23 mitochondrial import inner membrane translocase complex (ortholog) X 14228994 14235962 - 30032202 116889169 MODEL JAAIVD010000014;XM_032890335 XP_032746226 mitochondrial import inner membrane translocase subunit Tim17-B protein-coding 625868034 LOC116914714 beta-defensin 4 13 64941033 64943405 - 22301074;30032202 116914714 MODEL JAAIVD010000008;XM_032919145 XP_032775036 protein-coding 625868040 LOC116907690 suppressor of SWI4 1 homolog 8 17151653 17155633 + 22301074;30032202 116907690 MODEL JAAIVD010000027;XM_032910796 XP_032766687 protein-coding 625868056 LOC116889551 U2 spliceosomal RNA X 75885725 75885932 + 116889551 MODEL JAAIVD010000014 pseudo 625868057 LOC116906619 transcription initiation factor TFIID subunit 13-like 8 115012387 115012812 - 22301074;30032202 116906619 MODEL JAAIVD010000027;XM_032909376 XP_032765267 protein-coding 625868061 LOC116907097 alpha-enolase-like 8 31069292 31070445 + 116907097 MODEL JAAIVD010000027 pseudo 625868062 Foxd3 forkhead box D3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); embryonic placenta development (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH glaucoma (ortholog); intellectual disability (ortholog); vitiligo (ortholog); FOUND IN chromatin (ortholog) 1 54872273 54873681 - 30032202 116887688 MODEL JAAIVD010000025;XM_032889286 XP_032745177 forkhead box protein D3 protein-coding 625868065 Pgs1 phosphatidylglycerophosphate synthase 1 PARTICIPATES IN cardiolipin biosynthetic pathway; glycerophospholipid metabolic pathway; ASSOCIATED WITH High Myopia (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrion (ortholog) 9 66035268 66070936 - 30032202 116908717 MODEL JAAIVD010000002;XM_032912055 XP_032767946 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, mitochondrial protein-coding 625868079 LOC116896953 metaxin-3-like 3 120700983 120702052 + 116896953 MODEL JAAIVD010000012 pseudo 625868080 Btnl2 butyrophilin like 2 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN negative regulation of T cell receptor signaling pathway (ortholog); positive regulation of interleukin-2 production (ortholog); positive regulation of T cell proliferation (ortholog); ASSOCIATED WITH berylliosis (ortholog); coronary artery disease (ortholog); Graves' disease (ortholog) 18 7058234 7071945 + 30032202 116887270 MODEL JAAIVD010000013;XM_032888840 XP_032744731 butyrophilin-like protein 2 protein-coding 625868094 LOC116898582 40S ribosomal protein S25-like 4 166510731 166511107 + 116898582 MODEL JAAIVD010000003 pseudo 625868095 LOC116895963 olfactory receptor 10AG1-like 3 145016689 145055853 + 116895963 MODEL JAAIVD010000012 pseudo 625868096 Crhr2 corticotropin releasing hormone receptor 2 ENCODES a protein that exhibits corticotrophin-releasing factor receptor activity (ortholog); corticotropin-releasing hormone receptor activity (ortholog); G protein-coupled peptide receptor activity (ortholog); INVOLVED IN actin filament organization (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN corticotropin-releasing hormone signaling pathway; G protein mediated signaling pathway via Galphas family; protein kinase A (PKA) signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Anorexia (ortholog); anxiety disorder (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cell body fiber (ortholog) 6 85957104 85984188 + 22301074;30032202 116902825 MODEL JAAIVD010000024;XM_032905154;XM_032905155 XP_032761045;XP_032761046 corticotropin-releasing factor receptor 2 protein-coding 625868114 Oprd1 opioid receptor delta 1 ENCODES a protein that exhibits G protein-coupled enkephalin receptor activity (ortholog); G protein-coupled opioid receptor activity (ortholog); receptor serine/threonine kinase binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adult locomotory behavior (ortholog); cellular response to growth factor stimulus (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); Cardiac Arrhythmias (ortholog); FOUND IN axon terminus (ortholog); dendrite membrane (ortholog); membrane (ortholog) 1 26103521 26137249 + 22301074;30032202 116895625 MODEL JAAIVD010000025;XM_032896837 XP_032752728 delta-type opioid receptor protein-coding 625868121 LOC116897737 nucleoside diphosphate kinase, mitochondrial-like 4 114692753 114693242 + 116897737 MODEL JAAIVD010000003 pseudo 625868122 LOC116910712 small nucleolar RNA SNORA17 9 44184575 44184706 + 116910712 MODEL JAAIVD010000002;XR_004389239 snorna 625868125 LOC116884567 protocadherin beta-15-like 15 1146107 1149722 + 22301074 116884567 MODEL JAAIVD010000010;XM_032885709 XP_032741600 protein-coding 625868130 LOC116884883 UBA-like domain-containing protein 2 15 33298394 33300500 + 116884883 MODEL JAAIVD010000010 pseudo 625868131 LOC116904993 thyroid hormone receptor-associated protein 3 7 55370962 55374465 + 30032202 116904993 MODEL JAAIVD010000026;XM_032907676 XP_032763567 protein-coding 625868136 LOC116901388 uncharacterized LOC116901388 5 23129950 23164897 + 116901388 MODEL JAAIVD010000023;XR_004387985 ncrna 625868141 Klhl22 kelch like family member 22 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN cell division (ortholog); cellular response to amino acid stimulus (ortholog); cellular response to L-leucine (ortholog); FOUND IN centrosome (ortholog); Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) 4 3018982 3058024 + 22301074;30032202 116898651 MODEL JAAIVD010000003;XM_032899881;XM_032899882 XP_032755772;XP_032755773 kelch-like protein 22 protein-coding 625868155 LOC116899157 zinc finger protein 431-like 4 87307208 87334874 - 22301074 116899157 MODEL JAAIVD010000003;XM_032900715;XM_032900716 XP_032756606;XP_032756607 protein-coding 625868166 Zfand2b zinc finger AN1-type containing 2B ENCODES a protein that exhibits K48-linked polyubiquitin modification-dependent protein binding (ortholog); polyubiquitin modification-dependent protein binding (ortholog); ubiquitin binding (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein targeting to ER (ortholog); regulation of insulin-like growth factor receptor signaling pathway (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog); proteasome complex (ortholog) 4 148527732 148530796 + 22301074;30032202 116899521 MODEL JAAIVD010000003;XM_032901380;XM_032901381 XP_032757271;XP_032757272 AN1-type zinc finger protein 2B protein-coding 625868183 Emc4 ER membrane protein complex subunit 4 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); FOUND IN EMC complex (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) 5 90685952 90690543 - 30032202 116901742 MODEL JAAIVD010000023;XM_032903877 XP_032759768 protein-coding 625868192 Hpcal1 hippocalcin like 1 INVOLVED IN liver development (ortholog); ASSOCIATED WITH cataract 13 with adult i phenotype (ortholog); Experimental Liver Cirrhosis (ortholog) 7 37483327 37588867 + 22301074;30032202 116904904 MODEL JAAIVD010000026;XM_032907510;XM_032907511;XM_032907513 XP_032763401;XP_032763402;XP_032763404 hippocalcin-like protein 1 protein-coding 625868205 LOC116901012 39S ribosomal protein L47, mitochondrial-like 5 118372484 118373344 + 116901012 MODEL JAAIVD010000023 pseudo 625868206 Ak2 adenylate kinase 2 ENCODES a protein that exhibits AMP kinase activity (ortholog); nucleobase-containing compound kinase activity (ortholog); INVOLVED IN ADP biosynthetic process (ortholog); AMP metabolic process (ortholog); dATP metabolic process (ortholog); PARTICIPATES IN adefovir pharmacokinetics pathway; de novo purine biosynthetic pathway; tenofovir pharmacokinetics pathway; ASSOCIATED WITH COVID-19 (ortholog); Deafness (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog); sperm flagellum (ortholog); sperm mitochondrial sheath (ortholog) 1 29119757 29138078 - 22301074;30032202 116896313 MODEL JAAIVD010000025;XM_032897406;XM_032897412 XP_032753297;XP_032753303 adenylate kinase 2, mitochondrial protein-coding 625868222 LOC116901074 zinc finger protein 844-like 5 142849238 142863880 - 116901074 MODEL JAAIVD010000023 pseudo 625868223 Ccnb2 cyclin B2 INVOLVED IN G2/MI transition of meiotic cell cycle (ortholog); in utero embryonic development (ortholog); negative regulation of meiotic cell cycle process involved in oocyte maturation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 64766911 64780130 - 22301074;30032202 116907344 MODEL JAAIVD010000027;XM_032910280 XP_032766171 G2/mitotic-specific cyclin-B2 protein-coding 625868236 LOC116910440 60S ribosomal protein L7a-like 9 6510808 6511605 + 116910440 MODEL JAAIVD010000002 pseudo 625868237 Rassf2 Ras association domain family member 2 ENCODES a protein that exhibits protein kinase activity (ortholog); INVOLVED IN bone remodeling (ortholog); canonical NF-kappaB signal transduction (ortholog); homeostasis of number of cells (ortholog); ASSOCIATED WITH Lymphatic Metastasis (ortholog); Nasopharyngeal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); kinetochore (ortholog) 5 111711257 111748765 - 22301074;30032202 116901996 MODEL JAAIVD010000023;XM_032904255 XP_032760146 ras association domain-containing protein 2 protein-coding 625868252 Fgfbp1 fibroblast growth factor binding protein 1 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); INVOLVED IN cell-cell signaling (ortholog); positive regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis (ortholog); positive regulation of cell migration involved in sprouting angiogenesis (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog) 11 61787514 61788599 + 30032202 116912802 MODEL JAAIVD010000006;XM_032916968 XP_032772859 fibroblast growth factor-binding protein 1 protein-coding 625868257 Ptchd3 patched domain containing 3 FOUND IN endoplasmic reticulum (ortholog); sperm midpiece (ortholog) 9 62193256 62204277 - 22301074;30032202 116910059 MODEL JAAIVD010000002;XM_032913870 XP_032769761 patched domain-containing protein 3 protein-coding 625868265 Trnak-cuu transfer RNA lysine (anticodon CUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 842244 842316 - 116910819 MODEL JAAIVD010000002 trna 625868266 Znf831 zinc finger protein 831 ASSOCIATED WITH COVID-19 (ortholog); melanoma (ortholog) 5 143271529 143342522 - 116902262 MODEL JAAIVD010000023;XM_032904681;XM_032904682 XP_032760572;XP_032760573 protein-coding 625868278 Trnaa-ugc transfer RNA alanine (anticodon UGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 31433633 31433704 - 116910829 MODEL JAAIVD010000002 trna 625868279 LOC116911859 small nucleolar RNA U109 10 23698308 23698442 + 116911859 MODEL JAAIVD010000005;XR_004389381 snorna 625868282 LOC116896216 histone H2A.Z ENCODES a protein that exhibits chromatin DNA binding (ortholog); nucleosomal DNA binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); cellular response to insulin stimulus (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN Barr body (ortholog); euchromatin (ortholog); heterochromatin (ortholog) 3 21308641 21310975 - 22301074;30032202 116896216 MODEL JAAIVD010000012;XM_032897271 XP_032753162 protein-coding 625868291 Ubash3b ubiquitin associated and SH3 domain containing B ENCODES a protein that exhibits identical protein binding (ortholog); phosphoprotein binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN collagen-activated signaling pathway (ortholog); collagen-activated tyrosine kinase receptor signaling pathway (ortholog); negative regulation of bone resorption (ortholog) 8 35598313 35745065 - 22301074;30032202 116908299 MODEL JAAIVD010000027;XM_032911579 XP_032767470 ubiquitin-associated and SH3 domain-containing protein B protein-coding 625868309 Cog1 component of oligomeric golgi complex 1 INVOLVED IN Golgi organization (ortholog); retrograde transport, vesicle recycling within Golgi (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation type IIg (ortholog); Enterovirus Infections (ortholog); FOUND IN COG complex (ortholog); Golgi apparatus (ortholog) 9 75643804 75656192 - 30032202 116909176 MODEL JAAIVD010000002;XM_032912666 XP_032768557 conserved oligomeric Golgi complex subunit 1 protein-coding 625868326 LOC116887111 keratin-associated protein 12-1 18 1060704 1061066 + 22301074;30032202 116887111 MODEL JAAIVD010000013;XM_032888651;XM_032888652 XP_032744542;XP_032744543 protein-coding 625868332 LOC116913036 U6 spliceosomal RNA 11 8288157 8288263 + 116913036 MODEL JAAIVD010000006;XR_004389573 snrna 625868335 Cnn3 calponin 3 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); negative regulation of ATP-dependent activity (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN actin cytoskeleton (ortholog); cytosol (ortholog); dendrite (ortholog) 3 38405219 38444924 - 22301074 116896310 MODEL JAAIVD010000012;XM_032897398 XP_032753289 calponin-3 protein-coding 625868346 LOC116900369 olfactory receptor 10AG1-like 5 69435421 69436371 + 22301074 116900369 MODEL JAAIVD010000023;XM_032902118 XP_032758009 protein-coding 625868350 LOC116911389 uncharacterized LOC116911389 10 57846117 57848242 - 116911389 MODEL JAAIVD010000005;XR_004389325 ncrna 625868355 Trnak-cuu transfer RNA lysine (anticodon CUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 101748121 101748193 - 116897696 MODEL JAAIVD010000012 trna 625868356 LOC116890212 transmembrane and death domain protein 1-like 1 262047703 262048788 + 22301074 116890212 MODEL JAAIVD010000025;XM_032890952 XP_032746843 protein-coding 625868359 LOC116909330 olfactory receptor 1361-like 9 25767906 25768884 + 22301074;30032202 116909330 MODEL JAAIVD010000002;XM_032912871 XP_032768762 protein-coding 625868362 Znf385d zinc finger protein 385D ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); substance-related disorder (ortholog) 12 87715183 88066422 - 22301074;30032202 116914051 MODEL JAAIVD010000007;XM_032918333 XP_032774224 protein-coding 625868374 Oasl 2'-5'-oligoadenylate synthetase like ENCODES a protein that exhibits 2'-5'-oligoadenylate synthetase activity (ortholog); DNA binding (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN interleukin-27-mediated signaling pathway (ortholog); negative regulation of viral genome replication (ortholog); positive regulation of RIG-I signaling pathway (ortholog); ASSOCIATED WITH Human Influenza (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) 16 38888529 38900051 - 22301074;30032202 116885530 MODEL JAAIVD010000004;XM_032886827;XM_032886828 XP_032742718;XP_032742719 2'-5'-oligoadenylate synthase-like protein protein-coding 625868388 Dtd1 D-aminoacyl-tRNA deacylase 1 ENCODES a protein that exhibits DNA binding (ortholog); FOUND IN mitochondrion (ortholog) 5 124247921 124283112 + 22301074;30032202 116902052 MODEL JAAIVD010000023;XM_032904337 XP_032760228 protein-coding 625868396 Polr1c RNA polymerase I and III subunit C INVOLVED IN termination of RNA polymerase III transcription (ortholog); transcription by RNA polymerase III (ortholog); transcription elongation by RNA polymerase I (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase III transcription pathway; ASSOCIATED WITH genetic disease (ortholog); Hearing Loss (ortholog); hypomyelinating leukodystrophy 11 (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) 4 83623241 83627326 + 22301074;30032202 116899115 MODEL JAAIVD010000003;XM_032900635 XP_032756526 DNA-directed RNA polymerases I and III subunit RPAC1 protein-coding 625868409 Slc46a1 solute carrier family 46 member 1 ENCODES a protein that exhibits folic acid transmembrane transporter activity (ortholog); folic acid:proton symporter activity (ortholog); heme transmembrane transporter activity (ortholog); INVOLVED IN folate import across plasma membrane (ortholog); folate transmembrane transport (ortholog); folic acid transport (ortholog); PARTICIPATES IN altered folate cycle metabolic pathway; folate cycle metabolic pathway; folate metabolic pathway; ASSOCIATED WITH anemia (ortholog); chronic kidney disease (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); brush border membrane (ortholog) 9 91970461 91976917 - 22301074;30032202 116909634 MODEL JAAIVD010000002;XM_032913275 XP_032769166 proton-coupled folate transporter protein-coding 625868418 Tmsb15b thymosin beta 15B INVOLVED IN positive regulation of cell migration (ortholog) X 88890543 88893043 + 22301074;30032202 116888513 MODEL JAAIVD010000014;XM_032889813 XP_032745704 thymosin beta-15B protein-coding 625868425 LOC116894081 olfactory receptor 52D1-like 2 103152829 103153815 + 116894081 MODEL JAAIVD010000001 pseudo 625868426 LOC116900011 tetratricopeptide repeat protein 14-like 5 10178116 10179035 - 116900011 MODEL JAAIVD010000023 pseudo 625868427 LOC116911934 alpha-centractin-like 11 88316233 88317245 - 116911934 MODEL JAAIVD010000006 pseudo 625868428 LOC116888996 40S ribosomal protein S12-like 1 113437863 113438260 - 116888996 MODEL JAAIVD010000025 pseudo 625868429 LOC116897785 60S ribosomal protein L13a-like 4 8566411 8566960 - 116897785 MODEL JAAIVD010000003 pseudo 625868430 LOC116904263 spermatogenesis-associated protein 31A3-like 6 37848972 37854401 + 116904263 MODEL JAAIVD010000024;XM_032907213 XP_032763104 protein-coding 625868436 LOC116898171 tRNA N(3)-methylcytidine methyltransferase METTL6-like 4 125202260 125203234 - 116898171 MODEL JAAIVD010000003 pseudo 625868437 Spsb1 splA/ryanodine receptor domain and SOCS box containing 1 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN protein ubiquitination (ortholog); ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytosol (ortholog) 1 10802456 10860685 + 22301074;30032202 116892538 MODEL JAAIVD010000025;XM_032894303;XM_032894311;XM_032894320;XM_032894329 XP_032750194;XP_032750202;XP_032750211;XP_032750220 SPRY domain-containing SOCS box protein 1 protein-coding 625868452 LOC116896513 histone H2A type 2-A 3 61036600 61037078 - 22301074;30032202 116896513 MODEL JAAIVD010000012;XM_032897694 XP_032753585 protein-coding 625868457 Ube2k ubiquitin conjugating enzyme E2 K ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); ubiquitin-protein transferase activity (ortholog); ubiquitin-ubiquitin ligase activity (ortholog); INVOLVED IN cellular response to interferon-beta (ortholog); free ubiquitin chain polymerization (ortholog); intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (ortholog); FOUND IN cytoplasm (ortholog); filopodium tip (ortholog); nucleus (ortholog) 11 22585575 22643442 + 22301074;30032202 116912824 MODEL JAAIVD010000006;XM_032917004;XM_032917005 XP_032772895;XP_032772896 ubiquitin-conjugating enzyme E2 K protein-coding 625868471 Ms4a14 membrane spanning 4-domains A14 ASSOCIATED WITH essential tremor (ortholog) 2 10755141 10770177 - 30032202 116893644 MODEL JAAIVD010000001;XM_032895361 XP_032751252 membrane-spanning 4-domains subfamily A member 14 protein-coding 625868479 Dnd1 DND microRNA-mediated repression inhibitor 1 ENCODES a protein that exhibits miRNA binding (ortholog); mRNA 3'-UTR binding (ortholog); mRNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); germ cell development (ortholog); negative regulation of miRNA-mediated gene silencing (ortholog); ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); teratocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 15 7614144 7616974 + 22301074;30032202 116884288 MODEL JAAIVD010000010;XM_032885385 XP_032741276 dead end protein homolog 1 protein-coding 625868487 LOC116885984 U6 spliceosomal RNA 16 20088379 20088478 + 116885984 MODEL JAAIVD010000004 pseudo 625868488 LOC116895254 serine protease inhibitor Kazal-type 12 3 255911 259199 + 22301074 116895254 MODEL JAAIVD010000012;XM_032896572 XP_032752463 protein-coding 625868495 Sdhc succinate dehydrogenase complex subunit C ENCODES a protein that exhibits heme binding (ortholog); protein-membrane adaptor activity (ortholog); succinate dehydrogenase (quinone) activity (ortholog); INVOLVED IN tricarboxylic acid cycle (ortholog); PARTICIPATES IN citric acid cycle pathway; electron transport chain pathway; fumaric aciduria pathway; ASSOCIATED WITH breast cancer (ortholog); Carney Triad (ortholog); Carney-Stratakis syndrome (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 10 50290245 50311185 - 22301074;30032202 116911095 MODEL JAAIVD010000005;XM_032914926 XP_032770817 succinate dehydrogenase cytochrome b560 subunit, mitochondrial protein-coding 625868505 Parn poly(A)-specific ribonuclease ENCODES a protein that exhibits cation binding (ortholog); poly(A)-specific ribonuclease activity (ortholog); protein kinase binding (ortholog); INVOLVED IN box H/ACA sno(s)RNA 3'-end processing (ortholog); lncRNA processing (ortholog); miRNA catabolic process (ortholog); ASSOCIATED WITH autosomal recessive dyskeratosis congenita 6 (ortholog); dyskeratosis congenita (ortholog); genetic disease (ortholog); FOUND IN glutamatergic synapse (ortholog); nuclear speck (ortholog); nucleolus (ortholog) 9 8604998 8734897 - 22301074;30032202 116908588 MODEL JAAIVD010000002;XM_032911804;XM_032911805;XM_032911806;XM_032911807 XP_032767695;XP_032767696;XP_032767697;XP_032767698 poly(A)-specific ribonuclease PARN protein-coding 625868543 Kcnt1 potassium sodium-activated channel subfamily T member 1 ENCODES a protein that exhibits chloride-activated potassium channel activity (ortholog); intracellular sodium-activated potassium channel activity (ortholog); outward rectifier potassium channel activity (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); potassium ion transport (ortholog); protein homotetramerization (ortholog); ASSOCIATED WITH autosomal dominant nocturnal frontal lobe epilepsy 1 (ortholog); autosomal dominant nocturnal frontal lobe epilepsy 5 (ortholog); benign epilepsy with centrotemporal spikes (ortholog); FOUND IN plasma membrane (ortholog); postsynaptic density membrane (ortholog) 5 11169421 11222230 - 22301074;30032202 116901282 MODEL JAAIVD010000023;XM_032903060;XM_032903061;XM_032903062;XM_032903063;XM_032903064;XM_032903065;XM_032903066;XM_032903067;XM_032903068;XM_032903070;XM_032903071;XM_032903072 XP_032758951;XP_032758952;XP_032758953;XP_032758954;XP_032758955;XP_032758956;XP_032758957;XP_032758958;XP_032758959;XP_032758961;XP_032758962;XP_032758963 potassium channel subfamily T member 1 protein-coding 625868598 Leng9 leukocyte receptor cluster member 9 ASSOCIATED WITH myoepithelioma (ortholog) 2 176658512 176661070 - 22301074 116892641 MODEL JAAIVD010000001;XM_032894461 XP_032750352 protein-coding 625868603 Ccdc184 coiled-coil domain containing 184 FOUND IN cytoplasm (ortholog) 1 270985146 270987452 + 30032202 116884687 MODEL JAAIVD010000025;XM_032885872 XP_032741763 coiled-coil domain-containing protein 184 protein-coding 625868608 Rab33a RAB33A, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); INVOLVED IN antigen processing and presentation (ortholog); ASSOCIATED WITH prostate cancer (ortholog); X-linked deafness 5 (ortholog) X 109884167 109895167 - 22301074;30032202 116889024 MODEL JAAIVD010000014;XM_032890227 XP_032746118 ras-related protein Rab-33A protein-coding 625868614 LOC116899935 U2 spliceosomal RNA 4 145832661 145832851 + 116899935 MODEL JAAIVD010000003;XR_004387902 snrna 625868617 Pdcd11 programmed cell death 11 ENCODES a protein that exhibits NF-kappaB binding (ortholog); PARTICIPATES IN ribosome biogenesis pathway; FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleus (ortholog) 2 46624930 46662771 + 22301074;30032202 116891264 MODEL JAAIVD010000001;XM_032892153 XP_032748044 protein RRP5 homolog protein-coding 625868656 Prrc1 proline rich coiled-coil 1 ENCODES a protein that exhibits identical protein binding (ortholog) 15 74468861 74497354 - 30032202 116884568 MODEL JAAIVD010000010;XM_032885710 XP_032741601 protein PRRC1 protein-coding 625868669 Tmco4 transmembrane and coiled-coil domains 4 1 19143980 19209190 - 116893783 MODEL JAAIVD010000025;XM_032895488 XP_032751379 transmembrane and coiled-coil domain-containing protein 4 protein-coding 625868686 Iqgap3 IQ motif containing GTPase activating protein 3 ENCODES a protein that exhibits calmodulin binding (ortholog); myosin VI light chain binding (ortholog); small GTPase binding (ortholog); INVOLVED IN ERK1 and ERK2 cascade (ortholog); G1/S transition of mitotic cell cycle (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); lateral plasma membrane (ortholog) 3 65441713 65484447 - 22301074;30032202 116896701 MODEL JAAIVD010000012;XM_032898108 XP_032753999 ras GTPase-activating-like protein IQGAP3 protein-coding 625868728 Duoxa2 dual oxidase maturation factor 2 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN hydrogen peroxide biosynthetic process (ortholog); hydrogen peroxide metabolic process (ortholog); intracellular protein localization (ortholog); ASSOCIATED WITH congenital hypothyroidism (ortholog); familial thyroid dyshormonogenesis (ortholog); genetic disease (ortholog); FOUND IN apical part of cell (ortholog); cell leading edge (ortholog); cytosol (ortholog) 5 100405135 100408917 + 22301074;30032202 116901886 MODEL JAAIVD010000023;XM_032904093 XP_032759984 protein-coding 625868738 Aoc2 amine oxidase copper containing 2 ENCODES a protein that exhibits primary methylamine oxidase activity (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); silicosis (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) 9 60626917 60632538 + 22301074;30032202 116910574 MODEL JAAIVD010000002;XM_032914498 XP_032770389 retina-specific copper amine oxidase protein-coding 625868746 Filip1l filamin A interacting protein 1 like INVOLVED IN connective tissue replacement involved in inflammatory response wound healing (ortholog); gene expression (ortholog); hindgut development (ortholog); FOUND IN centrosome (ortholog) 4 41672042 41675192 + 116898910 MODEL JAAIVD010000003;XM_032900317 XP_032756208 filamin A-interacting protein 1-like protein-coding 625868751 Osgep O-sialoglycoprotein endopeptidase ENCODES a protein that exhibits tRNA N(6)-L-threonylcarbamoyladenine synthase activity (ortholog); INVOLVED IN tRNA modification (ortholog); tRNA threonylcarbamoyladenosine modification (ortholog); ASSOCIATED WITH Galloway-Mowat syndrome (ortholog); Galloway-Mowat syndrome 3 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); EKC/KEOPS complex (ortholog) 12 72390594 72398047 + 22301074;30032202 116913377 MODEL JAAIVD010000007;XM_032917547 XP_032773438 probable tRNA N6-adenosine threonylcarbamoyltransferase protein-coding 625868766 Actmap actin maturation protease ENCODES a protein that exhibits cysteine-type aminopeptidase activity (ortholog); initiator methionyl aminopeptidase activity (ortholog); INVOLVED IN protein processing (ortholog) 2 168737131 168746375 - 116892440 MODEL JAAIVD010000001;XM_032894129;XM_032894130;XM_032894132;XM_032894133 XP_032750020;XP_032750021;XP_032750023;XP_032750024 C2H19orf54 UPF0692 protein C19orf54 homolog;chromosome 2 C19orf54 homolog protein-coding 625868787 Wdr47 WD repeat domain 47 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); anterior commissure morphogenesis (ortholog); autophagy (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN axon (ortholog); cell body (ortholog); cytoplasm (ortholog) 3 49613200 49673156 - 22301074 116896356 MODEL JAAIVD010000012;XM_032897463 XP_032753354 WD repeat-containing protein 47 protein-coding 625868806 LOC116902663 U6 spliceosomal RNA 5 131834128 131834234 + 116902663 MODEL JAAIVD010000023;XR_004388225 snrna 625868809 Cep152 centrosomal protein 152 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN centriole replication (ortholog); centrosome duplication (ortholog); de novo centriole assembly involved in multi-ciliated epithelial cell differentiation (ortholog); ASSOCIATED WITH genetic disease (ortholog); microcephaly (ortholog); primary autosomal recessive microcephaly 9 (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 5 103889253 103959748 - 30032202 116901905 MODEL JAAIVD010000023;XM_032904119 XP_032760010 centrosomal protein of 152 kDa protein-coding 625868841 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 30018395 30018466 + 116904827 MODEL JAAIVD010000024 trna 625868842 Ntpcr nucleoside-triphosphatase, cancer-related ENCODES a protein that exhibits ribonucleoside triphosphate phosphatase activity (ortholog); PARTICIPATES IN thiamine metabolic pathway; FOUND IN mitochondrion (ortholog) 17 45250405 45264361 + 22301074;30032202 116886464 MODEL JAAIVD010000011;XM_032887965 XP_032743856 cancer-related nucleoside-triphosphatase protein-coding 625868851 LOC116886214 60S ribosomal protein L27-like 17 44528746 44529153 - 116886214 MODEL JAAIVD010000011 pseudo 625868852 LOC116906830 60S ribosomal protein L17-like 8 60554194 60554751 - 116906830 MODEL JAAIVD010000027 pseudo 625868853 Dusp7 dual specificity phosphatase 7 ENCODES a protein that exhibits MAP kinase tyrosine/serine/threonine phosphatase activity (ortholog); INVOLVED IN negative regulation of MAP kinase activity (ortholog); peptidyl-tyrosine dephosphorylation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytosol (ortholog) 8 97670276 97677403 + 22301074;30032202 116907478 MODEL JAAIVD010000027;XM_032910465 XP_032766356 dual specificity protein phosphatase 7 protein-coding 625868860 LOC116912635 kelch repeat and BTB domain-containing protein 8-like 11 1485617 1487407 + 116912635 MODEL JAAIVD010000006 pseudo 625868861 LOC116893067 cytochrome P450 2C12, female-specific 2 39119164 39177051 + 22301074;30032202 116893067 MODEL JAAIVD010000001;XM_032895025 XP_032750916 protein-coding 625868874 LOC116890579 U1 spliceosomal RNA 1 233345129 233345284 - 116890579 MODEL JAAIVD010000025;XR_004386742 snrna 625868877 Pik3r5 phosphoinositide-3-kinase regulatory subunit 5 ENCODES a protein that exhibits 1-phosphatidylinositol-3-kinase regulator activity (ortholog); G-protein beta/gamma-subunit complex binding (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); phosphatidylinositol metabolic process (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH ataxia-oculomotor apraxia 3 (ortholog); colon cancer (ortholog); spastic ataxia (ortholog); FOUND IN centriolar satellite (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 48033244 48097934 + 22301074;30032202 116909050 MODEL JAAIVD010000002;XM_032912530 XP_032768421 phosphoinositide 3-kinase regulatory subunit 5 protein-coding 625868900 Pm20d2 peptidase M20 domain containing 2 ENCODES a protein that exhibits dipeptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN proteolysis (ortholog); regulation of protein metabolic process (ortholog); FOUND IN nucleoplasm (ortholog) 1 109850366 109867026 + 22301074;30032202 116902316 MODEL JAAIVD010000025;XM_032904766 XP_032760657 peptidase M20 domain-containing protein 2 protein-coding 625868911 LOC116912620 60S ribosomal protein L18-like 11 71073914 71076529 - 116912620 MODEL JAAIVD010000006 pseudo 625868912 LOC116889454 U6 spliceosomal RNA X 56634756 56634862 - 116889454 MODEL JAAIVD010000014;XR_004386412 snrna 625868915 LOC116886497 40S ribosomal protein S18-like 17 4136825 4137309 + 116886497 MODEL JAAIVD010000011 pseudo 625868916 LOC116889122 protein ARMCX6-like X 87047162 87050160 - 30032202 116889122 MODEL JAAIVD010000014;XM_032890294 XP_032746185 protein-coding 625868924 Col4a4 collagen type IV alpha 4 chain ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); molecular adaptor activity (ortholog); INVOLVED IN glomerular basement membrane development (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Alport syndrome (ortholog); atypical hemolytic-uremic syndrome (ortholog); autosomal dominant Alport syndrome 3A (ortholog); FOUND IN basement membrane (ortholog); collagen type IV trimer (ortholog) 4 155331751 155450325 - 22301074 116899563 MODEL JAAIVD010000003;XM_032901460 XP_032757351 collagen alpha-4(IV) chain protein-coding 625868976 Dhdds dehydrodolichyl diphosphate synthase subunit ENCODES a protein that exhibits ditrans,polycis-polyprenyl diphosphate synthase [(2E,6E)-farnesyl diphosphate specific] activity (ortholog); prenyltransferase activity (ortholog); INVOLVED IN dolichyl diphosphate biosynthetic process (ortholog); dolichyl monophosphate biosynthetic process (ortholog); ASSOCIATED WITH developmental delay and seizures with or without movement abnormalities (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN dehydrodolichyl diphosphate synthase complex (ortholog); endoplasmic reticulum membrane (ortholog) 1 24240539 24267851 + 30032202 116894920 MODEL JAAIVD010000025;XM_032896503;XM_032896504 XP_032752394;XP_032752395 dehydrodolichyl diphosphate synthase complex subunit DHDDS protein-coding 625868992 Plekhm2 pleckstrin homology and RUN domain containing M2 ENCODES a protein that exhibits kinesin binding (ortholog); INVOLVED IN Golgi organization (ortholog); lysosome localization (ortholog); natural killer cell mediated cytotoxicity (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); FOUND IN endosome membrane (ortholog); lysosomal membrane (ortholog) 1 16485195 16521995 + 30032202 116893274 MODEL JAAIVD010000025;XM_032895122;XM_032895123 XP_032751013;XP_032751014 pleckstrin homology domain-containing family M member 2 protein-coding 625869017 LOC116886371 thymosin beta-10 1 14922604 14923073 + 22301074;30032202 116886371 MODEL JAAIVD010000025;XM_032887838 XP_032743729 protein-coding 625869022 Mrpl12 mitochondrial ribosomal protein L12 INVOLVED IN mitochondrial transcription (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); combined oxidative phosphorylation deficiency 45 (ortholog); COVID-19 (ortholog); FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 9 63536053 63540108 - 22301074;30032202 116909586 MODEL JAAIVD010000002;XM_032913209 XP_032769100 39S ribosomal protein L12, mitochondrial protein-coding 625869030 LOC116907168 olfactory receptor 7G2-like 8 15256239 15257198 + 22301074;30032202 116907168 MODEL JAAIVD010000027;XM_032910123 XP_032766014 protein-coding 625869034 LOC116908216 myosin light polypeptide 6-like 8 73020039 73024204 - 116908216 MODEL JAAIVD010000027 pseudo 625869035 LOC116900950 olfactory receptor 4F15-like 5 90479325 90481506 + 116900950 MODEL JAAIVD010000023 pseudo 625869036 LOC116899849 small nucleolar RNA SNORA17 4 77582345 77582477 - 116899849 MODEL JAAIVD010000003;XR_004387845 snorna 625869039 LOC116893072 lamin tail domain-containing protein 1-like 1 64429511 64444001 + 116893072 MODEL JAAIVD010000025 pseudo 625869040 Bbs5 Bardet-Biedl syndrome 5 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN cilium assembly (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl syndrome 5 (ortholog); FOUND IN axoneme (ortholog); BBSome (ortholog); centriolar satellite (ortholog) 5 46950280 46970556 + 22301074;30032202 116901482 MODEL JAAIVD010000023;XM_032903436;XM_032903437 XP_032759327;XP_032759328 Bardet-Biedl syndrome 5 protein protein-coding 625869058 Topbp1 DNA topoisomerase II binding protein 1 ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); identical protein binding (ortholog); phosphorylation-dependent protein binding (ortholog); INVOLVED IN broken chromosome clustering (ortholog); chromosome organization (ortholog); DNA damage checkpoint signaling (ortholog); ASSOCIATED WITH B-Cell Chronic Lymphocytic Leukemia (ortholog); Pulmonary Arterial Hypertension (ortholog); FOUND IN chromosome (ortholog); condensed nuclear chromosome (ortholog); male germ cell nucleus (ortholog) 8 94606198 94650510 + 30032202 116907407 MODEL JAAIVD010000027;XM_032910364 XP_032766255 DNA topoisomerase 2-binding protein 1 protein-coding 625869090 Taf11 TATA-box binding protein associated factor 11 ENCODES a protein that exhibits DNA binding (ortholog); nuclear thyroid hormone receptor binding (ortholog); nuclear vitamin D receptor binding (ortholog); INVOLVED IN host-mediated activation of viral transcription (ortholog); mRNA transcription by RNA polymerase II (ortholog); positive regulation of transcription initiation by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription factor TFIID complex (ortholog) 18 5949883 5957898 + 22301074;30032202 116886853 MODEL JAAIVD010000013;XM_032888308 XP_032744199 transcription initiation factor TFIID subunit 11 protein-coding 625869100 Setdb2 SET domain bifurcated histone lysine methyltransferase 2 ENCODES a protein that exhibits histone H3K9 methyltransferase activity (ortholog); INVOLVED IN chromosome segregation (ortholog); mitotic cell cycle (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 12 64937264 64969122 + 22301074;30032202 116913071 MODEL JAAIVD010000007;XM_032917203 XP_032773094 histone-lysine N-methyltransferase SETDB2 protein-coding 625869118 LOC116915160 U6 spliceosomal RNA 13 34084436 34084542 - 116915160 MODEL JAAIVD010000008;XR_004389824 snrna 625869121 LOC116908060 olfactory receptor 8D2-like 8 82752722 82753654 + 22301074;30032202 116908060 MODEL JAAIVD010000027;XM_032911330 XP_032767221 protein-coding 625869124 Sulf2 sulfatase 2 ENCODES a protein that exhibits arylsulfatase activity (ortholog); N-acetylglucosamine-6-sulfatase activity (ortholog); INVOLVED IN bone development (ortholog); cartilage development (ortholog); chondrocyte development (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); endometriosis (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); extracellular region (ortholog) 5 151832009 151889224 + 22301074;30032202 116902327 MODEL JAAIVD010000023;XM_032904781 XP_032760672 extracellular sulfatase Sulf-2 protein-coding 625869148 Dao D-amino acid oxidase ENCODES a protein that exhibits D-amino-acid dehydrogenase activity (ortholog); D-amino-acid oxidase activity (ortholog); FAD binding (ortholog); INVOLVED IN antibacterial humoral response (ortholog); D-alanine catabolic process (ortholog); D-amino acid catabolic process (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; guanidinoacetate methyltransferase deficiency pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); autistic disorder (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) 16 39936946 39957596 - 22301074;30032202 116885348 MODEL JAAIVD010000004;XM_032886623 XP_032742514 D-amino-acid oxidase protein-coding 625869164 LOC116900874 alpha-enolase-like 5 68966195 68967029 - 116900874 MODEL JAAIVD010000023 pseudo 625869165 Itgae integrin subunit alpha E PARTICIPATES IN E-cadherin signaling pathway; integrin mediated signaling pathway; FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog) 9 42366293 42422662 - 22301074;30032202 116909768 MODEL JAAIVD010000002;XM_032913455 XP_032769346 integrin alpha-E protein-coding 625869200 LOC116885295 inactive 2'-5' oligoadenylate synthetase 1C-like 16 33004251 33013201 + 30032202 116885295 MODEL JAAIVD010000004;XM_032886543 XP_032742434 protein-coding 625869210 LOC116914952 ral guanine nucleotide dissociation stimulator-like 13 11845415 11846866 + 116914952 MODEL JAAIVD010000008;XM_032919371 XP_032775262 protein-coding 625869215 G6pd glucose-6-phosphate dehydrogenase ENCODES a protein that exhibits carbohydrate binding (ortholog); D-glucose binding (ortholog); glucose-6-phosphate dehydrogenase activity (ortholog); INVOLVED IN angiotensin-mediated vasoconstriction involved in regulation of systemic arterial blood pressure (ortholog); angiotensin-mediated vasodilation involved in regulation of systemic arterial blood pressure (ortholog); cellular response to oxidative stress (ortholog); PARTICIPATES IN pentose phosphate pathway; pentose phosphate pathway - oxidative phase; ribose 5-phosphate isomerase deficiency pathway; ASSOCIATED WITH acute kidney failure (ortholog); ALAD-Deficiency Porphyria (ortholog); anemia (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) X 128410427 128430194 - 22301074;30032202 116888340 MODEL JAAIVD010000014;XM_032889611 XP_032745502 glucose-6-phosphate 1-dehydrogenase protein-coding 625869232 LOC116900324 olfactory receptor 1052-like 5 64425942 64426880 - 22301074;30032202 116900324 MODEL JAAIVD010000023;XM_032902080 XP_032757971 protein-coding 625869235 LOC116904368 40S ribosomal protein SA-like 6 84455615 84456499 + 116904368 MODEL JAAIVD010000024 pseudo 625869236 Brcc3 BRCA1/BRCA2-containing complex subunit 3 ENCODES a protein that exhibits enzyme regulator activity (ortholog); K63-linked deubiquitinase activity (ortholog); metal-dependent deubiquitinase activity (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); chromatin remodeling (ortholog); DNA repair-dependent chromatin remodeling (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; histone modification pathway; ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); Occupational Diseases (ortholog); Pregnancy in Diabetics (ortholog); FOUND IN BRCA1-A complex (ortholog); BRISC complex (ortholog); cytoplasm (ortholog) 4 88526427 88529274 + 22301074;30032202 116899214 MODEL JAAIVD010000003;XM_032900808 XP_032756699 lys-63-specific deubiquitinase BRCC36 protein-coding 625869241 Znf384 zinc finger protein 384 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN nucleocytoplasmic transport (ortholog); positive regulation of protein secretion (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN focal adhesion (ortholog) 6 22857543 22887258 - 30032202 116903265 MODEL JAAIVD010000024;XM_032905661;XM_032905662;XM_032905664;XM_032905665;XM_032905666;XM_032905667;XM_032905668;XM_032905669;XM_032905670;XM_032905671;XM_032905672;XM_032905673;XM_032905675 XP_032761552;XP_032761553;XP_032761555;XP_032761556;XP_032761557;XP_032761558;XP_032761559;XP_032761560;XP_032761561;XP_032761562;XP_032761563;XP_032761564;XP_032761566 protein-coding 625869279 Gmcl1 germ cell-less 1, spermatogenesis associated ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); FOUND IN nuclear envelope (ortholog); nuclear matrix (ortholog) 6 59577777 59617459 + 22301074;30032202 116903546 MODEL JAAIVD010000024;XM_032906159 XP_032762050 germ cell-less protein-like 1 protein-coding 625869297 Lrfn1 leucine rich repeat and fibronectin type III domain containing 1 INVOLVED IN regulation of postsynaptic density assembly (ortholog); FOUND IN cell surface (ortholog); postsynaptic density membrane (ortholog) 2 167525814 167543571 - 22301074 116892388 MODEL JAAIVD010000001;XM_032894054;XM_032894055;XM_032894056;XM_032894057;XM_032894058 XP_032749945;XP_032749946;XP_032749947;XP_032749948;XP_032749949 leucine-rich repeat and fibronectin type III domain-containing protein 1 protein-coding 625869318 Oga O-GlcNAcase ENCODES a protein that exhibits [protein]-3-O-(N-acetyl-D-glucosaminyl)-L-serine/L-threonine O-N-acetyl-alpha-D-glucosaminase activity (ortholog); beta-N-acetylglucosaminidase activity (ortholog); histone acetyltransferase activity (ortholog); INVOLVED IN dATP metabolic process (ortholog); N-acetylglucosamine metabolic process (ortholog); negative regulation of cardiac muscle adaptation (ortholog); PARTICIPATES IN hexosamine biosynthetic pathway; ASSOCIATED WITH Reperfusion Injury (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) 2 45223444 45260179 - 30032202 116891230 MODEL JAAIVD010000001;XM_032892079 XP_032747970 protein O-GlcNAcase protein-coding 625869338 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92711659 92711730 + 116904841 MODEL JAAIVD010000024 trna 625869339 LOC116894031 olfactory receptor 52Z1-like 2 102081536 102082501 - 22301074 116894031 MODEL JAAIVD010000001;XM_032895749 XP_032751640 protein-coding 625869342 Rfx8 regulatory factor X8 4 115916749 115977797 - 30032202 116898146 MODEL JAAIVD010000003;XM_032899524 XP_032755415 DNA-binding protein RFX8;RFX family member 8, lacking RFX DNA binding domain protein-coding 625869361 Fsip2 fibrous sheath interacting protein 2 INVOLVED IN flagellated sperm motility (ortholog); protein localization to cilium (ortholog); sperm axoneme assembly (ortholog); ASSOCIATED WITH spermatogenic failure 34 (ortholog); FOUND IN sperm end piece (ortholog); sperm head-tail coupling apparatus (ortholog); sperm midpiece (ortholog) 5 59986184 60058140 + 116900219 MODEL JAAIVD010000023;XM_032901974 XP_032757865 fibrous sheath-interacting protein 2 protein-coding 625869387 Minpp1 multiple inositol-polyphosphate phosphatase 1 ENCODES a protein that exhibits bisphosphoglycerate 3-phosphatase activity (ortholog); inositol bisphosphate phosphatase activity (ortholog); inositol hexakisphosphate phosphatase activity (ortholog); INVOLVED IN bone mineralization (ortholog); intracellular monoatomic cation homeostasis (ortholog); ossification (ortholog); PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; ASSOCIATED WITH Arsenic Poisoning (ortholog); Follicular Thyroid Cancer (ortholog); pontocerebellar hypoplasia type 16 (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog); extracellular region (ortholog); plasma membrane (ortholog) 2 32528799 32553560 + 30032202 116891091 MODEL JAAIVD010000001;XM_032891807;XM_032891808 XP_032747698;XP_032747699 multiple inositol polyphosphate phosphatase 1 protein-coding 625869400 LOC116896160 transmembrane protein 256-like 3 9365622 9366109 - 116896160 MODEL JAAIVD010000012;XM_032897153 XP_032753044 protein-coding 625869405 LOC116888538 transcriptional regulator ATRX-like X 65343023 65348676 - 116888538 MODEL JAAIVD010000014;XM_032889844 XP_032745735 protein-coding 625869413 LOC116908053 apoptosis regulator BAX-like 8 88498757 88499269 + 116908053 MODEL JAAIVD010000027 pseudo 625869414 Nt5c3a 5'-nucleotidase, cytosolic IIIA ENCODES a protein that exhibits 5'-nucleotidase activity (ortholog); INVOLVED IN adenosine metabolic process (ortholog); CMP catabolic process (ortholog); dCMP catabolic process (ortholog); ASSOCIATED WITH Chloracne (ortholog); congenital nonspherocytic hemolytic anemia (ortholog); congenital nonspherocytic hemolytic anemia 8 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 6 84094785 84135388 + 22301074;30032202 116903741 MODEL JAAIVD010000024;XM_032906423;XM_032906424;XM_032906426 XP_032762314;XP_032762315;XP_032762317 cytosolic 5'-nucleotidase 3A protein-coding 625869434 Sumf2 sulfatase modifying factor 2 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH mucosulfatidosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) 16 24155444 24173275 - 30032202 116885233 MODEL JAAIVD010000004;XM_032886471 XP_032742362 inactive C-alpha-formylglycine-generating enzyme 2 protein-coding 625869447 Ssh1 slingshot protein phosphatase 1 ENCODES a protein that exhibits actin binding (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell morphogenesis (ortholog); cellular response to ATP (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH Neointima (ortholog); primary ovarian insufficiency (ortholog); FOUND IN cell leading edge (ortholog); cell projection (ortholog); cytoplasm (ortholog) 16 39965375 40021875 + 22301074;30032202 116885360 MODEL JAAIVD010000004;XM_032886634 XP_032742525 protein phosphatase Slingshot homolog 1 protein-coding 625869466 Blzf1 basic leucine zipper nuclear factor 1 ENCODES a protein that exhibits enzyme binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN Golgi organization (ortholog); Golgi to plasma membrane protein transport (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); nucleoplasm (ortholog) 10 43516537 43527513 - 30032202 116911068 MODEL JAAIVD010000005;XM_032914836 XP_032770727 golgin-45 protein-coding 625869475 Kmt2d lysine methyltransferase 2D ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); histone H3K4 methyltransferase activity (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN heterochromatin formation (ortholog); in utero embryonic development (ortholog); oocyte growth (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); autosomal dominant intellectual developmental disorder 26 (ortholog); FOUND IN MLL3/4 complex (ortholog) 1 271653647 271692887 - 22301074;30032202 116884869 MODEL JAAIVD010000025;XM_032886113 XP_032742004 histone-lysine N-methyltransferase 2D protein-coding 625869535 LOC116903815 MICOS complex subunit MIC13-like 6 89552591 89552910 + 30032202 116903815 MODEL JAAIVD010000024;XM_032906519 XP_032762410 protein-coding 625869539 LOC116895190 40S ribosomal protein S6-like 3 206270249 206279967 - 22301074;30032202 116895190 MODEL JAAIVD010000012;XM_032896534 XP_032752425 protein-coding 625869543 LOC116910657 U1 spliceosomal RNA 9 83347509 83347672 - 116910657 MODEL JAAIVD010000002;XR_004389191 snrna 625869546 Il22 interleukin 22 INVOLVED IN response to glucocorticoid (ortholog); ASSOCIATED WITH Acute Otitis Media (ortholog); asthma (ortholog); autoimmune hepatitis (ortholog); FOUND IN extracellular region (ortholog) 1 196297650 196302835 + 22301074 116890028 MODEL JAAIVD010000025;XM_032890806 XP_032746697 interleukin-22 protein-coding 625869554 LOC116912938 U7 small nuclear RNA 11 59724793 59724852 + 116912938 MODEL JAAIVD010000006;XR_004389507 snrna 625869557 LOC116913692 histone deacetylase 1-like 12 53976877 53978315 - 116913692 MODEL JAAIVD010000007;XR_004389637 pseudo 625869560 Myh7b myosin heavy chain 7B INVOLVED IN regulation of calcium-mediated signaling (ortholog); regulation of CAMKK-AMPK signaling cascade (ortholog); regulation of cardiac muscle cell contraction (ortholog); ASSOCIATED WITH Contracture (ortholog); Dilated Cardiomyopathy with Left Ventricular Noncompaction (ortholog); Dwarfism (ortholog); FOUND IN cardiac myofibril (ortholog) 5 134944726 134969017 + 22301074 116902188 MODEL JAAIVD010000023;XM_032904553 XP_032760444 myosin-7B protein-coding 625869604 Dhtkd1 dehydrogenase E1 and transketolase domain containing 1 ENCODES a protein that exhibits 2-oxoadipate dehydrogenase activity (ortholog); INVOLVED IN generation of precursor metabolites and energy (ortholog); hematopoietic progenitor cell differentiation (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; glutaric aciduria type I pathway; hyperlysinemia pathway; ASSOCIATED WITH 2-aminoadipic 2-oxoadipic aciduria (ortholog); Charcot-Marie-Tooth disease axonal type 2Q (ortholog); Charcot-Marie-Tooth Disease Type 2A2 (ortholog); FOUND IN mitochondrion (ortholog); oxoadipate dehydrogenase complex (ortholog) 14 12212260 12260543 - 22301074;30032202 116883645 MODEL JAAIVD010000009;XM_032884835;XM_032884836;XM_032884837 XP_032740726;XP_032740727;XP_032740728 probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial protein-coding 625869633 LOC116884065 uncharacterized LOC116884065 14 56545800 56559174 + 116884065 MODEL JAAIVD010000009;XR_004385814 ncrna 625869638 Camk2b calcium/calmodulin dependent protein kinase II beta ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); identical protein binding (ortholog); phospholipase binding (ortholog); INVOLVED IN activation of meiosis involved in egg activation (ortholog); calcium ion transport (ortholog); cell projection morphogenesis (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; p38 MAPK signaling pathway; type II interferon signaling pathway; ASSOCIATED WITH Apnea (ortholog); autism spectrum disorder (ortholog); autosomal dominant intellectual developmental disorder 40 (ortholog); FOUND IN calcium- and calmodulin-dependent protein kinase complex (ortholog); cytosol (ortholog); dendrite (ortholog) 11 74919784 75007241 - 22301074;30032202 116912810 MODEL JAAIVD010000006;XM_032916973;XM_032916974;XM_032916975;XM_032916976;XM_032916977 XP_032772864;XP_032772865;XP_032772866;XP_032772867;XP_032772868 calcium/calmodulin-dependent protein kinase type II subunit beta protein-coding 625869675 LOC116900520 uncharacterized LOC116900520 5 82933051 82935840 + 116900520 MODEL JAAIVD010000023;XR_004387935 ncrna 625869679 LOC116887281 uncharacterized LOC116887281 18 23676492 23677928 + 116887281 MODEL JAAIVD010000013;XR_004386208 ncrna 625869683 Mtfmt mitochondrial methionyl-tRNA formyltransferase ENCODES a protein that exhibits methionyl-tRNA formyltransferase activity (ortholog); INVOLVED IN conversion of methionyl-tRNA to N-formyl-methionyl-tRNA (ortholog); PARTICIPATES IN folate metabolic pathway; glycine N-methyltransferase deficiency pathway; hereditary folate malabsorption pathway; ASSOCIATED WITH combined oxidative phosphorylation deficiency 15 (ortholog); Dwarfism (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) 8 59742089 59760536 + 22301074;30032202 116907306 MODEL JAAIVD010000027;XM_032910251 XP_032766142 methionyl-tRNA formyltransferase, mitochondrial protein-coding 625869696 LOC116903150 single-pass membrane and coiled-coil domain-containing protein 3-like 6 12631645 12635217 + 116903150 MODEL JAAIVD010000024 pseudo 625869697 R3hdml R3H domain containing like 5 154460839 154471741 - 30032202 116902379 MODEL JAAIVD010000023;XM_032904891 XP_032760782 peptidase inhibitor R3HDML protein-coding 625869705 Wipf1 WAS/WASL interacting protein family member 1 ENCODES a protein that exhibits cytoskeletal anchor activity (ortholog); protein folding chaperone (ortholog); SH3 domain binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament-based movement (ortholog); positive regulation of protein export from nucleus (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog) 5 50781010 50821309 - 22301074 116900837 MODEL JAAIVD010000023;XM_032902537 XP_032758428 WAS/WASL-interacting protein family member 1 protein-coding 625869716 Ralgapa1 Ral GTPase activating protein catalytic subunit alpha 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN activation of GTPase activity (ortholog); ASSOCIATED WITH genetic disease (ortholog); long QT syndrome (ortholog); Muscle Hypotonia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 7 68844343 69200969 - 22301074;30032202 116905062 MODEL JAAIVD010000026;XM_032907755;XM_032907757;XM_032907758;XM_032907759;XM_032907760;XM_032907761;XM_032907762;XM_032907763;XM_032907764;XM_032907765;XR_004388482 XP_032763646;XP_032763648;XP_032763649;XP_032763650;XP_032763651;XP_032763652;XP_032763653;XP_032763654;XP_032763655;XP_032763656 ral GTPase-activating protein subunit alpha-1 protein-coding 625869781 Naa10 N-alpha-acetyltransferase 10, NatA catalytic subunit ENCODES a protein that exhibits acetyltransferase activity (ortholog); N-acetyltransferase activity (ortholog); protein-N-terminal amino-acid acetyltransferase activity (ortholog); INVOLVED IN negative regulation of maintenance of mitotic sister chromatid cohesion, centromeric (ortholog); positive regulation of protein refolding (ortholog); protein maturation (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); autosomal dominant intellectual developmental disorder (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); NatA complex (ortholog) X 128661296 128666778 + 30032202 116888665 MODEL JAAIVD010000014;XM_032889960 XP_032745851 N-alpha-acetyltransferase 10 protein-coding 625869793 Ccdc51 coiled-coil domain containing 51 ENCODES a protein that exhibits mitochondrial ATP-gated potassium channel activity (ortholog); INVOLVED IN cell volume homeostasis (ortholog); mitochondrial potassium ion transmembrane transport (ortholog); potassium ion transmembrane transport (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); FOUND IN mitochondrial ATP-gated potassium channel complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 8 100342315 100361152 + 116907638 MODEL JAAIVD010000027;XM_032910701;XM_032910702;XM_032910703 XP_032766592;XP_032766593;XP_032766594 mitochondrial potassium channel protein-coding 625869807 LOC116912546 uncharacterized LOC116912546 11 21942561 21944557 - 116912546 MODEL JAAIVD010000006;XR_004389467 ncrna 625869812 Fkbp2 FKBP prolyl isomerase 2 ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog) 2 815536 818208 + 22301074;30032202 116894812 MODEL JAAIVD010000001;XM_032896477;XM_032896478;XM_032896479;XM_032896480 XP_032752368;XP_032752369;XP_032752370;XP_032752371 peptidyl-prolyl cis-trans isomerase FKBP2 protein-coding 625869829 Mtif3 mitochondrial translational initiation factor 3 ENCODES a protein that exhibits ribosomal small subunit binding (ortholog); translation factor activity, RNA binding (ortholog); INVOLVED IN ribosome disassembly (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); FOUND IN mitochondrion (ortholog) 16 6919452 6924614 + 22301074;30032202 116885344 MODEL JAAIVD010000004;XM_032886618;XM_032886619 XP_032742509;XP_032742510 translation initiation factor IF-3, mitochondrial protein-coding 625869839 LOC116906512 small nucleolar RNA U3 7 75313427 75313519 + 116906512 MODEL JAAIVD010000026 pseudo 625869840 Mgat3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase ENCODES a protein that exhibits beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity (ortholog); glycosyltransferase activity (ortholog); INVOLVED IN amyloid-beta metabolic process (ortholog); cellular response to oxidative stress (ortholog); cognition (ortholog); PARTICIPATES IN E-cadherin signaling pathway 1 249942187 249984117 + 22301074;30032202 116913713 MODEL JAAIVD010000025;XM_032918012;XM_032918021;XM_032918030;XM_032918037;XM_032918042;XM_032918050 XP_032773903;XP_032773912;XP_032773921;XP_032773928;XP_032773933;XP_032773941 protein-coding 625869860 LOC116908192 ubiquitin-conjugating enzyme E2 L3-like 8 57065388 57065898 - 116908192 MODEL JAAIVD010000027 pseudo 625869861 Wars1 tryptophanyl-tRNA synthetase 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein homodimerization activity (ortholog); protein kinase binding (ortholog); INVOLVED IN intracellular signal transduction (ortholog); regulation of angiogenesis (ortholog); tryptophanyl-tRNA aminoacylation (ortholog); PARTICIPATES IN tryptophan metabolic pathway; ASSOCIATED WITH autosomal dominant distal hereditary motor neuronopathy 9 (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog); protein-containing complex (ortholog) 7 126544488 126575042 - 22301074;30032202 116905458 MODEL JAAIVD010000026;XM_032908415 XP_032764306 tryptophan--tRNA ligase, cytoplasmic protein-coding 625869876 E2f2 E2F transcription factor 2 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); lens fiber cell apoptotic process (ortholog); negative regulation of sprouting angiogenesis (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Disease Progression (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) 1 22047080 22066935 - 22301074;30032202 116894422 MODEL JAAIVD010000025;XM_032896130 XP_032752021 transcription factor E2F2 protein-coding 625869888 Selenof selenoprotein F ENCODES a protein that exhibits selenium binding (ortholog); thioredoxin peroxidase activity (ortholog); INVOLVED IN response to lipopolysaccharide (ortholog); sperm DNA condensation (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog) 3 16115481 16147092 - 30032202 116896188 MODEL JAAIVD010000012;XM_032897233 XP_032753124 protein-coding 625869897 LOC116905656 60 kDa heat shock protein, mitochondrial-like 7 16471827 16473510 - 116905656 MODEL JAAIVD010000026 pseudo 625869898 LOC116915154 U4 spliceosomal RNA 13 63069121 63069253 - 116915154 MODEL JAAIVD010000008 pseudo 625869899 Col9a1 collagen type IX alpha 1 chain ENCODES a protein that exhibits carbohydrate binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN bone morphogenesis (ortholog); cartilage development (ortholog); chondrocyte differentiation (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH connective tissue disease (ortholog); dilated cardiomyopathy (ortholog); fundus dystrophy (ortholog); FOUND IN collagen type IX trimer (ortholog) 4 101513526 101602414 + 116898460 MODEL JAAIVD010000003;XM_032899717 XP_032755608 collagen alpha-1(IX) chain protein-coding 625869940 LOC116885101 small nucleolar RNA SNORA74 15 8811349 8811545 - 116885101 MODEL JAAIVD010000010;XR_004385967 snorna 625869943 Kctd5 potassium channel tetramerization domain containing 5 ENCODES a protein that exhibits identical protein binding (ortholog); protein-containing complex binding (ortholog); FOUND IN cytosol (ortholog) 9 1342340 1370062 - 22301074;30032202 116909180 MODEL JAAIVD010000002;XM_032912672 XP_032768563 BTB/POZ domain-containing protein KCTD5 protein-coding 625869953 Lrrc39 leucine rich repeat containing 39 3 43138713 43157073 - 22301074 116896328 MODEL JAAIVD010000012;XM_032897424;XM_032897425 XP_032753315;XP_032753316 leucine-rich repeat-containing protein 39 protein-coding 625869971 Htra1 HtrA serine peptidase 1 ENCODES a protein that exhibits identical protein binding (ortholog); molecular function activator activity (ortholog); serine-type peptidase activity (ortholog); INVOLVED IN chorionic trophoblast cell differentiation (ortholog); negative regulation of BMP signaling pathway (ortholog); negative regulation of defense response to virus (ortholog); ASSOCIATED WITH age related macular degeneration (ortholog); age related macular degeneration 7 (ortholog); autosomal dominant cerebral arteriopathy with subcortical infarcts and leukoencephalopathy 2 (ortholog); FOUND IN extracellular matrix (ortholog); plasma membrane (ortholog) 2 71102434 71151993 - 22301074;30032202 116891416 MODEL JAAIVD010000001;XM_032892442 XP_032748333 serine protease HTRA1 protein-coding 625869984 LOC116903922 60S ribosomal protein L26-like 6 100177706 100178146 - 116903922 MODEL JAAIVD010000024 pseudo 625869985 Usp44 ubiquitin specific peptidase 44 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); deubiquitinase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); chromosome segregation (ortholog); negative regulation of mitotic metaphase/anaphase transition (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; histone modification pathway; FOUND IN fibrillar center (ortholog); nucleus (ortholog) 1 172926528 172940524 + 22301074;30032202 116889985 MODEL JAAIVD010000025;XM_032890776 XP_032746667 ubiquitin carboxyl-terminal hydrolase 44 protein-coding 625869994 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92911344 92911415 - 116904857 MODEL JAAIVD010000024 trna 625869995 Myo3a myosin IIIA ENCODES a protein that exhibits actin filament binding (ortholog); ADP binding (ortholog); calmodulin binding (ortholog); INVOLVED IN auditory receptor cell stereocilium organization (ortholog); cochlea morphogenesis (ortholog); inner ear development (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH autosomal dominant nonsyndromic deafness 30 (ortholog); autosomal dominant nonsyndromic deafness 90 (ortholog); autosomal recessive nonsyndromic deafness (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); filamentous actin (ortholog) 14 1939394 2125796 - 22301074 116883479 MODEL JAAIVD010000009;XM_032884634 XP_032740525 myosin-IIIa protein-coding 625870031 LOC116891423 glyceraldehyde-3-phosphate dehydrogenase-like 2 71635085 71636084 - 116891423 MODEL JAAIVD010000001 pseudo 625870032 Tmem132b transmembrane protein 132B ASSOCIATED WITH melanoma (ortholog) 16 28116286 28378429 - 116885787 MODEL JAAIVD010000004;XM_032887118;XM_032887119;XM_032887120 XP_032743009;XP_032743010;XP_032743011 protein-coding 625870051 Paqr7 progestin and adipoQ receptor family member 7 1 23744526 23755774 - 30032202 116894737 MODEL JAAIVD010000025;XM_032896420;XM_032896423 XP_032752311;XP_032752314 membrane progestin receptor alpha protein-coding 625870060 Cyth2 cytohesin 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); inositol 1,4,5 trisphosphate binding (ortholog); INVOLVED IN dendrite morphogenesis (ortholog); endosome organization (ortholog); negative regulation of dendrite development (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; phosphatidylinositol 3-kinase class I signaling pathway; FOUND IN bicellular tight junction (ortholog); BLOC-1 complex (ortholog); cell body (ortholog) 2 153701849 153708705 + 22301074 116892124 MODEL JAAIVD010000001;XM_032893607 XP_032749498 cytohesin-2 protein-coding 625870076 LOC116914912 60S ribosomal protein L10-like 13 20641831 20642813 - 116914912 MODEL JAAIVD010000008 pseudo 625870077 Ppp6r1 protein phosphatase 6 regulatory subunit 1 ENCODES a protein that exhibits protein phosphatase regulator activity (ortholog); small GTPase binding (ortholog); FOUND IN cytosol (ortholog); lamellipodium (ortholog) 2 177209741 177235439 - 22301074;30032202 116892658 MODEL JAAIVD010000001;XM_032894481 XP_032750372 serine/threonine-protein phosphatase 6 regulatory subunit 1 protein-coding 625870105 LOC116886597 protein HEXIM2-like 17 8116623 8144778 - 116886597 MODEL JAAIVD010000011 pseudo 625870106 Fhip2a FHF complex subunit HOOK interacting protein 2A ASSOCIATED WITH melanoma (ortholog); syndromic intellectual disability (ortholog) 2 58770294 58795740 - 116891325 MODEL JAAIVD010000001;XM_032892249 XP_032748140 Fam160b1 family with sequence similarity 160 member B1;protein FAM160B1 protein-coding 625870127 LOC116907732 olfactory receptor 145-like 8 82857771 82858718 - 22301074;30032202 116907732 MODEL JAAIVD010000027;XM_032910859 XP_032766750 protein-coding 625870130 LOC116887154 uncharacterized LOC116887154 18 6779694 6786356 - 116887154 MODEL JAAIVD010000013;XR_004386201 ncrna 625870134 LOC116898368 poly(rC)-binding protein 2-like 4 61959371 61968153 - 30032202 116898368 MODEL JAAIVD010000003;XM_032899680 XP_032755571 protein-coding 625870138 LOC116887455 60S ribosomal protein L6-like 1 221290754 221291421 + 116887455 MODEL JAAIVD010000025 pseudo 625870139 LOC116897381 U4 spliceosomal RNA 3 28977331 28977461 + 116897381 MODEL JAAIVD010000012 pseudo 625870140 Frs2 fibroblast growth factor receptor substrate 2 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); neurotrophin TRKA receptor binding (ortholog); transmembrane receptor protein tyrosine kinase adaptor activity (ortholog); INVOLVED IN anterior/posterior axis specification, embryo (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); PARTICIPATES IN brain-derived neurotrophic factor signaling pathway; fibroblast growth factor signaling pathway; ASSOCIATED WITH renal cell carcinoma (ortholog); FOUND IN adherens junction (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) 1 195229589 195242763 - 30032202 116909232 MODEL JAAIVD010000025;XM_032912738 XP_032768629 protein-coding 625870150 LOC116889308 uncharacterized LOC116889308 X 57222157 57241609 - 116889308 MODEL JAAIVD010000014;XR_004386374;XR_004386375 ncrna 625870158 Fbxo40 F-box protein 40 INVOLVED IN muscle cell differentiation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); FOUND IN cytoplasm (ortholog) 4 21836453 21843697 - 22301074;30032202 116897972 MODEL JAAIVD010000003;XM_032899373 XP_032755264 F-box only protein 40 protein-coding 625870163 Ccr10 C-C motif chemokine receptor 10 ENCODES a protein that exhibits C-C chemokine receptor activity (ortholog); chemokine receptor activity (ortholog); INVOLVED IN chemotaxis (ortholog); positive regulation of cytosolic calcium ion concentration (ortholog); ASSOCIATED WITH status epilepticus (ortholog); FOUND IN cell surface (ortholog) 9 60471478 60472882 - 22301074;30032202 116910522 MODEL JAAIVD010000002;XM_032914426 XP_032770317 C-C chemokine receptor type 10 protein-coding 625870168 LOC116887224 D-dopachrome decarboxylase 18 11666304 11668655 + 30032202 116887224 MODEL JAAIVD010000013;XM_032888787 XP_032744678 protein-coding 625870175 LOC116888920 transcription factor Sp3-like X 56637959 56642241 - 116888920 MODEL JAAIVD010000014 pseudo 625870176 LOC116906433 small nucleolar RNA SNORA48 7 79045186 79045321 + 116906433 MODEL JAAIVD010000026 pseudo 625870177 LOC116906496 U2 spliceosomal RNA 7 72334567 72334757 + 116906496 MODEL JAAIVD010000026;XR_004388737 snrna 625870180 LOC116903045 uncharacterized LOC116903045 6 55115890 55116517 - 116903045 MODEL JAAIVD010000024;XR_004388248 ncrna 625870184 LOC116914633 activated RNA polymerase II transcriptional coactivator p15-like 13 64146394 64146784 + 116914633 MODEL JAAIVD010000008 pseudo 625870185 LOC116890359 U6 spliceosomal RNA 1 181869062 181869166 - 116890359 MODEL JAAIVD010000025;XR_004386577 snrna 625870188 LOC116892112 nodal modulator 1 2 153437526 153488707 - 22301074;30032202 116892112 MODEL JAAIVD010000001;XM_032893591 XP_032749482 protein-coding 625870223 LOC116913246 ankyrin repeat domain-containing protein 26-like 12 78151603 78161186 - 116913246 MODEL JAAIVD010000007;XM_032917406 XP_032773297 protein-coding 625870229 Slc35a5 solute carrier family 35 member A5 ENCODES a protein that exhibits pyrimidine nucleotide-sugar transmembrane transporter activity (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Monoclonal B-Cell Lymphocytosis (ortholog); FOUND IN Golgi membrane (ortholog) 4 29901173 29921876 - 22301074;30032202 116898870 MODEL JAAIVD010000003;XM_032900238;XM_032900239 XP_032756129;XP_032756130 probable UDP-sugar transporter protein SLC35A5 protein-coding 625870242 LOC116892646 uncharacterized LOC116892646 2 176578939 176628751 - 116892646 MODEL JAAIVD010000001;XR_004386960 ncrna 625870246 LOC116884758 protocadherin-3-like 15 1042487 1045616 + 22301074 116884758 MODEL JAAIVD010000010;XM_032885976 XP_032741867 protein-coding 625870251 Leprotl1 leptin receptor overlapping transcript like 1 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog) 13 52881338 52892154 + 30032202 116914740 MODEL JAAIVD010000008;XM_032919177 XP_032775068 leptin receptor overlapping transcript-like 1 protein-coding 625870259 Map3k8 mitogen-activated protein kinase kinase kinase 8 ENCODES a protein that exhibits MAP kinase kinase kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN cardiac ventricle development (ortholog); gap junction-mediated intercellular transport (ortholog); MAPK cascade (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; ASSOCIATED WITH background diabetic retinopathy (ortholog); breast cancer (ortholog); Carcinogenesis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 14 30708501 30728765 - 22301074 116883957 MODEL JAAIVD010000009;XM_032885201 XP_032741092 protein-coding 625870271 LOC116894900 U6 spliceosomal RNA 2 177314022 177314080 + 116894900 MODEL JAAIVD010000001 pseudo 625870272 LOC116884505 elongation factor 1-alpha 1-like 15 65227726 65229490 - 116884505 MODEL JAAIVD010000010;XR_004385873 pseudo 625870275 Dnaaf4 dynein axonemal assembly factor 4 ENCODES a protein that exhibits nuclear estrogen receptor binding (ortholog); INVOLVED IN cilium movement (ortholog); determination of left/right symmetry (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ASSOCIATED WITH dyslexia (ortholog); Kartagener syndrome (ortholog); male infertility (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 67298969 67312484 + 22301074;30032202 116907019 MODEL JAAIVD010000027;XM_032909957;XM_032909958;XM_032909959 XP_032765848;XP_032765849;XP_032765850 dynein assembly factor 4, axonemal protein-coding 625870298 C1H8orf89 chromosome 1 C8orf89 homolog 1 150423879 150444410 - 116889827 MODEL JAAIVD010000025;XM_032890666 XP_032746557 putative uncharacterized protein C8orf89 homolog protein-coding 625870307 LOC116902890 60S ribosomal protein L23-like 6 101279144 101279567 - 116902890 MODEL JAAIVD010000024 pseudo 625870308 Iqsec2 IQ motif and Sec7 domain ArfGEF 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); positive regulation of long-term synaptic depression (ortholog); positive regulation of synapse assembly (ortholog); ASSOCIATED WITH Atkin Syndrome (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN glutamatergic synapse (ortholog); photoreceptor ribbon synapse (ortholog); postsynaptic density membrane (ortholog) X 13293411 13375249 + 22301074;30032202 116889312 MODEL JAAIVD010000014;XM_032890431;XM_032890432;XM_032890433;XM_032890434 XP_032746322;XP_032746323;XP_032746324;XP_032746325 IQ motif and SEC7 domain-containing protein 2 protein-coding 625870338 Mid1 midline 1 ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN negative regulation of microtubule depolymerization (ortholog); positive regulation of stress-activated MAPK cascade (ortholog); protein localization to microtubule (ortholog); ASSOCIATED WITH B-Cell Immunodeficiency, Distal Limb Anomalies, and Urogenital Malformations (ortholog); Dandy-Walker syndrome (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic microtubule (ortholog); cytosol (ortholog) X 26665848 26753944 - 22301074 116889080 MODEL JAAIVD010000014;XM_032890258 XP_032746149 E3 ubiquitin-protein ligase Midline-1 protein-coding 625870350 LOC116884852 uncharacterized LOC116884852 15 30742464 30749447 - 116884852 MODEL JAAIVD010000010;XR_004385903 ncrna 625870355 LOC116885733 paired immunoglobulin-like type 2 receptor beta-2 16 15912354 15915549 - 30032202 116885733 MODEL JAAIVD010000004;XM_032887043 XP_032742934 protein-coding 625870362 LOC116912011 40S ribosomal protein S6-like 11 58119901 58120599 + 116912011 MODEL JAAIVD010000006 pseudo 625870363 Ror1 receptor tyrosine kinase like orphan receptor 1 ENCODES a protein that exhibits ATP binding (ortholog); signaling receptor activity (ortholog); Wnt receptor activity (ortholog); INVOLVED IN astrocyte development (ortholog); cell population proliferation (ortholog); inner ear development (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 108 (ortholog); Breast Neoplasms (ortholog); Neoplasm Metastasis (ortholog); FOUND IN axon terminus (ortholog); cell surface (ortholog); plasma membrane (ortholog) 1 54121691 54475210 - 22301074;30032202 116899777 MODEL JAAIVD010000025;XM_032901776 XP_032757667 inactive tyrosine-protein kinase transmembrane receptor ROR1 protein-coding 625870376 LOC116887340 olfactory receptor 14J1-like 18 10742263 10743234 + 22301074 116887340 MODEL JAAIVD010000013;XM_032888933 XP_032744824 protein-coding 625870379 LOC116884476 L-lactate dehydrogenase A chain-like 1 209830050 209830661 + 116884476 MODEL JAAIVD010000025 pseudo 625870380 LOC116884127 U6 spliceosomal RNA 14 42219648 42219742 + 116884127 MODEL JAAIVD010000009 pseudo 625870381 Aprt adenine phosphoribosyltransferase ENCODES a protein that exhibits adenine binding (ortholog); adenine phosphoribosyltransferase activity (ortholog); AMP binding (ortholog); INVOLVED IN adenine metabolic process (ortholog); AMP salvage (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH adenine phosphoribosyltransferase deficiency (ortholog); Breast Neoplasms (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN cytosol (ortholog) 17 42203352 42205626 - 22301074;30032202 116886123 MODEL JAAIVD010000011;XM_032887463 XP_032743354 protein-coding 625870390 Atxn7l3b ataxin 7 like 3B INVOLVED IN regulation of gene expression (ortholog); FOUND IN cytoplasm (ortholog) 1 190981606 190985150 - 30032202 116908985 MODEL JAAIVD010000025;XM_032912459 XP_032768350 ataxin-7-like protein 3B protein-coding 625870395 LOC116888870 immunoglobulin superfamily member 1-like X 113047083 113052115 + 116888870 MODEL JAAIVD010000014;XM_032890131;XM_032890132;XM_032890133 XP_032746022;XP_032746023;XP_032746024 protein-coding 625870412 C14H7orf25 chromosome 14 C7orf25 homolog FOUND IN nucleoplasm (ortholog) 14 33504661 33506596 + 116883727 MODEL JAAIVD010000009;XM_032884960 XP_032740851 UPF0415 protein C7orf25 homolog protein-coding 625870417 Ncan neurocan INVOLVED IN modulation of chemical synaptic transmission (ortholog); regulation of postsynapse organization (ortholog); regulation of synapse structural plasticity (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH bipolar disorder (ortholog); dyslexia (ortholog); urinary bladder cancer (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); perineuronal net (ortholog) 13 12363847 12388206 - 22301074 116914398 MODEL JAAIVD010000008;XM_032918625 XP_032774516 neurocan core protein protein-coding 625870436 LOC116914374 uncharacterized LOC116914374 13 20356489 20364267 + 116914374 MODEL JAAIVD010000008;XR_004389744;XR_004389745 ncrna 625870443 Rxfp2 relaxin family peptide receptor 2 ENCODES a protein that exhibits peptide hormone binding (ortholog); protein-hormone receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); male gonad development (ortholog); ASSOCIATED WITH cryptorchidism (ortholog); disorder of sexual development (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN plasma membrane (ortholog) 16 3768171 3830493 - 22301074 116885365 MODEL JAAIVD010000004;XM_032886638 XP_032742529 relaxin receptor 2 protein-coding 625870465 Qki QKI, KH domain containing RNA binding ENCODES a protein that exhibits internal N(7)-methylguanine-containing RNA reader activity (ortholog); miRNA binding (ortholog); mRNA 3'-UTR binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); axon ensheathment (ortholog); intracellular mRNA localization (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH demyelinating disease (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); high grade glioma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) 2 189028049 189136838 - 30032202 116892816 MODEL JAAIVD010000001;XM_032894696;XM_032894697;XM_032894698;XM_032894699;XM_032894700;XM_032894701 XP_032750587;XP_032750588;XP_032750589;XP_032750590;XP_032750591;XP_032750592 protein quaking protein-coding 625870494 C4H2orf72 chromosome 4 C2orf72 homolog 4 158184436 158192683 + 116899585 MODEL JAAIVD010000003;XM_032901524;XM_032901525 XP_032757415;XP_032757416 uncharacterized protein C2orf72 homolog protein-coding 625870503 LOC116908263 uncharacterized LOC116908263 8 100643809 100648938 + 30032202 116908263 MODEL JAAIVD010000027;XM_032911513 XP_032767404 uncharacterized protein LOC116908263 protein-coding 625870508 LOC116884442 40S ribosomal protein S13-like 1 269487230 269487643 - 116884442 MODEL JAAIVD010000025 pseudo 625870509 Sez6l2 seizure related 6 homolog like 2 INVOLVED IN activation of protein kinase C activity (ortholog); adult locomotory behavior (ortholog); cerebellar Purkinje cell layer development (ortholog); ASSOCIATED WITH autistic disorder (ortholog); syndromic microphthalmia 5 (ortholog); FOUND IN endoplasmic reticulum (ortholog); neuronal cell body (ortholog) 2 74923385 74943349 - 30032202 116891495 MODEL JAAIVD010000001;XM_032892603;XM_032892604 XP_032748494;XP_032748495 seizure 6-like protein 2 protein-coding 625870534 LOC116914188 U6 spliceosomal RNA 12 90509762 90509866 + 116914188 MODEL JAAIVD010000007;XR_004389727 snrna 625870537 LOC116887552 40S ribosomal protein S12-like 18 3175847 3176229 + 116887552 MODEL JAAIVD010000013 pseudo 625870538 LOC116889688 inosine-5'-monophosphate dehydrogenase-like 30032202 116889688 MODEL JAAIVD010000052;XM_032890574 XP_032746465 protein-coding 625870539 LOC116904347 glyceraldehyde-3-phosphate dehydrogenase-like 6 72634224 72666145 - 22301074;30032202 116904347 MODEL JAAIVD010000024;XM_032907241 XP_032763132 protein-coding 625870543 Trim28 tripartite motif containing 28 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin-protein adaptor activity (ortholog); chromo shadow domain binding (ortholog); INVOLVED IN convergent extension involved in axis elongation (ortholog); DNA damage response (ortholog); DNA methylation-dependent constitutive heterochromatin formation (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH atherosclerosis (ortholog); Colorectal Neoplasms (ortholog); nephroblastoma (ortholog); FOUND IN chromatin (ortholog); euchromatin (ortholog); heterochromatin (ortholog) 2 174155178 174161797 - 22301074 116892634 MODEL JAAIVD010000001;XM_032894454 XP_032750345 transcription intermediary factor 1-beta protein-coding 625870564 Poll DNA polymerase lambda ENCODES a protein that exhibits 5'-deoxyribose-5-phosphate lyase activity (ortholog); DNA-directed DNA polymerase activity (ortholog); INVOLVED IN base-excision repair, gap-filling (ortholog); DNA biosynthetic process (ortholog); double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; FOUND IN nucleoplasm (ortholog); site of double-strand break (ortholog) 2 45033587 45041951 - 22301074;30032202 116891227 MODEL JAAIVD010000001;XM_032892071;XM_032892073;XM_032892074 XP_032747962;XP_032747964;XP_032747965 protein-coding 625870582 Hecw1 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 FOUND IN cytosol (ortholog) 14 32957085 33324139 - 22301074;30032202 116883328 MODEL JAAIVD010000009;XM_032884396;XM_032884397;XM_032884399 XP_032740287;XP_032740288;XP_032740290 E3 ubiquitin-protein ligase HECW1 protein-coding 625870619 Tnp2 transition protein 2 ENCODES a protein that exhibits zinc ion binding (ortholog); INVOLVED IN acrosome reaction (ortholog); binding of sperm to zona pellucida (ortholog); flagellated sperm motility (ortholog); FOUND IN nucleosome (ortholog); nucleus (ortholog) 9 11566920 11567643 + 22301074;30032202 116909583 MODEL JAAIVD010000002;XM_032913204 XP_032769095 nuclear transition protein 2 protein-coding 625870625 LOC116900289 olfactory receptor 8K3-like 5 63599007 63599945 - 22301074;30032202 116900289 MODEL JAAIVD010000023;XM_032902044 XP_032757935 protein-coding 625870628 LOC116900176 olfactory receptor 1B1 5 14764053 14765006 - 22301074;30032202 116900176 MODEL JAAIVD010000023;XM_032901932 XP_032757823 protein-coding 625870631 LOC116896150 60S ribosomal protein L9-like 3 9129793 9130370 - 116896150 MODEL JAAIVD010000012 pseudo 625870632 Gpn1 GPN-loop GTPase 1 ENCODES a protein that exhibits GTPase activity (ortholog); RNA polymerase II complex binding (ortholog); INVOLVED IN protein import into nucleus (ortholog); ASSOCIATED WITH Mouth Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 7 22656158 22673997 - 22301074;30032202 116905968 MODEL JAAIVD010000026;XM_032908973 XP_032764864 protein-coding 625870650 LOC116886647 40S ribosomal protein S25-like 17 21933923 21934561 + 116886647 MODEL JAAIVD010000011 pseudo 625870651 LOC116914063 eukaryotic translation initiation factor 3 subunit K-like 12 22211503 22212126 + 116914063 MODEL JAAIVD010000007 pseudo 625870652 LOC116913354 cysteine and histidine-rich protein 1-like 1 248985621 248987473 - 116913354 MODEL JAAIVD010000025;XM_032917511 XP_032773402 protein-coding 625870659 LOC116908122 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4-like 8 115187018 115187410 + 116908122 MODEL JAAIVD010000027 pseudo 625870660 Kctd16 potassium channel tetramerization domain containing 16 ENCODES a protein that exhibits G protein-coupled neurotransmitter receptor activity (ortholog); obsolete G protein-coupled neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential (ortholog); obsolete G protein-coupled neurotransmitter receptor activity involved in regulation of presynaptic membrane potential (ortholog); INVOLVED IN behavioral fear response (ortholog); memory (ortholog); regulation of G protein-coupled receptor signaling pathway (ortholog); FOUND IN postsynaptic membrane (ortholog); presynaptic membrane (ortholog); signaling receptor complex (ortholog) 15 4446309 4703033 - 22301074;30032202 116884958 MODEL JAAIVD010000010;XM_032886158;XM_032886159;XM_032886160;XM_032886161 XP_032742049;XP_032742050;XP_032742051;XP_032742052 BTB/POZ domain-containing protein KCTD16 protein-coding 625870676 Kif13b kinesin family member 13B ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); protein kinase binding (ortholog); INVOLVED IN regulation of axonogenesis (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) 12 59597697 59750703 - 22301074;30032202 116913850 MODEL JAAIVD010000007;XM_032918154 XP_032774045 kinesin-like protein KIF13B protein-coding 625870720 Herpud2 HERPUD family member 2 INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH systemic juvenile rheumatoid arthritis (ortholog) 8 21043542 21082167 - 22301074;30032202 116906696 MODEL JAAIVD010000027;XM_032909486 XP_032765377 homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein protein-coding 625870732 Nckap5l NCK associated protein 5 like INVOLVED IN microtubule bundle formation (ortholog); microtubule depolymerization (ortholog); FOUND IN centrosome (ortholog); microtubule plus-end (ortholog) 1 272223446 272248427 - 30032202 116885147 MODEL JAAIVD010000025;XM_032886356;XR_004385982 XP_032742247 nck-associated protein 5-like protein-coding 625870752 Rpl7l1 ribosomal protein L7 like 1 INVOLVED IN blastocyst formation (ortholog); FOUND IN mitochondrion (ortholog); nucleolus (ortholog) 4 83083862 83090763 + 22301074;30032202 116898404 MODEL JAAIVD010000003;XM_032899692 XP_032755583 60S ribosomal protein L7-like 1 protein-coding 625870762 LOC116909425 olfactory receptor 10-like 9 32005099 32006034 + 22301074 116909425 MODEL JAAIVD010000002;XM_032912999 XP_032768890 protein-coding 625870765 LOC116900871 olfactory receptor 10AG1-like 5 68896372 68897316 + 22301074 116900871 MODEL JAAIVD010000023;XM_032902553 XP_032758444 protein-coding 625870769 LOC116899199 long-chain-fatty-acid--CoA ligase ACSBG2-like 4 88240434 88268285 + 30032202 116899199 MODEL JAAIVD010000003;XM_032900784 XP_032756675 protein-coding 625870788 Spef2 sperm flagellar and cilia associated 2 INVOLVED IN brain morphogenesis (ortholog); cerebrospinal fluid circulation (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ASSOCIATED WITH genetic disease (ortholog); primary ciliary dyskinesia (ortholog); schizophrenia (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog); Golgi apparatus (ortholog) 3 170952825 171129875 + 22301074;30032202 116897130 MODEL JAAIVD010000012;XM_032898791;XM_032898792 XP_032754682;XP_032754683 sperm flagellar 2;sperm flagellar protein 2 APPROVED protein-coding 625870834 LOC116899986 60S ribosomal protein L7a-like 1 55415995 55416799 - 116899986 MODEL JAAIVD010000025 pseudo 625870835 LOC116884813 snRNA-activating protein complex subunit 5-like 15 43522909 43523187 - 116884813 MODEL JAAIVD010000010 pseudo 625870836 LOC116911274 cytochrome c oxidase subunit 7C, mitochondrial-like 10 40451095 40451334 - 22301074;30032202 116911274 MODEL JAAIVD010000005;XM_032915179 XP_032771070 protein-coding 625870840 Dyrk3 dual specificity tyrosine phosphorylation regulated kinase 3 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein kinase activity (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of DNA damage response, signal transduction by p53 class mediator (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nuclear speck (ortholog) 10 4666789 4677231 + 22301074;30032202 116911533 MODEL JAAIVD010000005;XM_032915522;XM_032915523;XM_032915524 XP_032771413;XP_032771414;XP_032771415 dual specificity tyrosine-phosphorylation-regulated kinase 3 protein-coding 625870853 LOC116899922 U1 spliceosomal RNA 4 138867710 138867865 - 116899922 MODEL JAAIVD010000003;XR_004387893 snrna 625870856 Etfa electron transfer flavoprotein subunit alpha ENCODES a protein that exhibits electron transfer activity (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN amino acid catabolic process (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); respiratory electron transport chain (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH genetic disease (ortholog); glutaric acidemia type 3 (ortholog); Glutaric Aciduria 2 (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 8 49515191 49578260 - 22301074;30032202 116906630 MODEL JAAIVD010000027;XM_032909388 XP_032765279 electron transfer flavoprotein subunit alpha, mitochondrial protein-coding 625870872 LOC116915063 SIN3-HDAC complex-associated factor-like 13 18680038 18680812 - 30032202 116915063 MODEL JAAIVD010000008;XM_032919481 XP_032775372 protein-coding 625870876 LOC116893857 olfactory receptor 13A1-like 2 61482212 61483141 - 22301074 116893857 MODEL JAAIVD010000001;XM_032895577 XP_032751468 protein-coding 625870879 Marcol MARCO like 3 274485 278495 + 116895194 MODEL JAAIVD010000012;XM_032896535 XP_032752426 MARCO-like protein protein-coding 625870885 Maged1 MAGE family member D1 ENCODES a protein that exhibits identical protein binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of epithelial cell proliferation (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog); protein-containing complex (ortholog) X 88967130 88973830 + 30032202 116888517 MODEL JAAIVD010000014;XM_032889816 XP_032745707 melanoma-associated antigen D1 protein-coding 625870902 Agrp agouti related neuropeptide ENCODES a protein that exhibits neuropeptide hormone activity (ortholog); receptor antagonist activity (ortholog); INVOLVED IN adult feeding behavior (ortholog); circadian rhythm (ortholog); eating behavior (ortholog); PARTICIPATES IN altered melanocortin system pathway; melanocortin system pathway; obesity pathway; ASSOCIATED WITH Hyperphagia (ortholog); obesity (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN extracellular region (ortholog); Golgi lumen (ortholog); neuronal cell body (ortholog) 17 25297685 25370111 - 22301074;30032202 116886445 MODEL JAAIVD010000011;XM_032887943;XM_032887944;XM_032887945 XP_032743834;XP_032743835;XP_032743836 agouti-related protein protein-coding 625870918 LOC116903022 protein transport protein Sec61 subunit gamma-like 6 154743905 154744135 + 116903022 MODEL JAAIVD010000024 pseudo 625870919 Vgll1 vestigial like family member 1 FOUND IN nucleoplasm (ortholog) X 117511951 117527830 + 22301074;30032202 116888175 MODEL JAAIVD010000014;XM_032889496 XP_032745387 transcription cofactor vestigial-like protein 1 protein-coding 625870923 LOC116886540 uncharacterized LOC116886540 17 28977446 28979418 + 116886540 MODEL JAAIVD010000011;XR_004386110 ncrna 625870928 Mrps33 mitochondrial ribosomal protein S33 ASSOCIATED WITH bipolar disorder (ortholog); FOUND IN mitochondrion (ortholog) 6 99975644 99984384 + 30032202 116903921 MODEL JAAIVD010000024;XM_032906692 XP_032762583 28S ribosomal protein S33, mitochondrial protein-coding 625870935 Fscn1 fascin actin-bundling protein 1 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); cell migration (ortholog); PARTICIPATES IN protein kinase C (PKC) signaling pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); Bile Duct Neoplasms (ortholog); cholangiocarcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); cell projection membrane (ortholog); cell-cell junction (ortholog) 16 10172024 10184796 - 22301074;30032202 116885505 MODEL JAAIVD010000004;XM_032886797 XP_032742688 fascin protein-coding 625870944 Nin ninein ENCODES a protein that exhibits microtubule minus-end binding (ortholog); INVOLVED IN centriole-centriole cohesion (ortholog); centrosome localization (ortholog); centrosome-templated microtubule nucleation (ortholog); ASSOCIATED WITH Seckel syndrome (ortholog); Seckel syndrome 7 (ortholog); FOUND IN apical part of cell (ortholog); axon (ortholog); axonal growth cone (ortholog) 7 83699489 83800596 - 22301074;30032202 116905130 MODEL JAAIVD010000026;XM_032907873;XM_032907874;XM_032907875;XM_032907876;XM_032907878;XM_032907879;XM_032907880;XM_032907881 XP_032763764;XP_032763765;XP_032763766;XP_032763767;XP_032763769;XP_032763770;XP_032763771;XP_032763772 protein-coding 625870997 LOC116913070 transaldolase-like 1 176003483 176004466 - 116913070 MODEL JAAIVD010000025 pseudo 625870998 Vps13b vacuolar protein sorting 13 homolog B ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN acrosome assembly (ortholog); adipose tissue development (ortholog); brain development (ortholog); ASSOCIATED WITH autistic disorder (ortholog); cataract (ortholog); Cohen syndrome (ortholog); FOUND IN acrosomal membrane (ortholog); cis-Golgi network membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment membrane (ortholog) 1 208955272 209499265 + 116910526 MODEL JAAIVD010000025;XM_032914433;XM_032914442 XP_032770324;XP_032770333 vacuolar protein sorting-associated protein 13B protein-coding 625871068 Septin3 septin 3 ENCODES a protein that exhibits GTP binding (ortholog); identical protein binding (ortholog); INVOLVED IN protein catabolic process at presynapse (ortholog); FOUND IN presynapse (ortholog); presynaptic membrane (ortholog); septin complex (ortholog) 1 251998924 252022724 + 22301074;30032202 116914244 MODEL JAAIVD010000025;XM_032918456;XM_032918461;XM_032918468 XP_032774347;XP_032774352;XP_032774359 neuronal-specific septin-3 protein-coding 625871088 Hormad2 HORMA domain containing 2 INVOLVED IN meiotic cell cycle (ortholog); meiotic sister chromatid cohesion (ortholog); FOUND IN chromosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 11 73326327 73411887 - 116912728 MODEL JAAIVD010000006;XM_032916861;XM_032916862;XM_032916863 XP_032772752;XP_032772753;XP_032772754 HORMA domain-containing protein 2 protein-coding 625871108 LOC116888822 dnaJ homolog subfamily A member 1-like X 11835554 11836976 + 116888822 MODEL JAAIVD010000014 pseudo 625871109 Acot11 acyl-CoA thioesterase 11 ENCODES a protein that exhibits fatty acyl-CoA hydrolase activity (ortholog); long-chain fatty acyl-CoA hydrolase activity (ortholog); INVOLVED IN negative regulation of cold-induced thermogenesis (ortholog); response to cold (ortholog); response to temperature stimulus (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial matrix (ortholog) 1 48040256 48063682 + 22301074;30032202 116890869 MODEL JAAIVD010000025;XM_032891492 XP_032747383 acyl-coenzyme A thioesterase 11 protein-coding 625871128 Bhlha15 basic helix-loop-helix family member a15 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cell differentiation (ortholog); cell maturation (ortholog); FOUND IN nucleus (ortholog) 16 8996946 9001101 - 22301074 116885243 MODEL JAAIVD010000004;XM_032886481 XP_032742372 class A basic helix-loop-helix protein 15 protein-coding 625871134 Rundc3a RUN domain containing 3A INVOLVED IN cGMP metabolic process (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) 9 61690896 61700019 + 30032202 116908781 MODEL JAAIVD010000002;XM_032912153;XM_032912154;XM_032912155;XM_032912157;XM_032912158;XM_032912159;XM_032912160;XM_032912161;XM_032912162 XP_032768044;XP_032768045;XP_032768046;XP_032768048;XP_032768049;XP_032768050;XP_032768051;XP_032768052;XP_032768053 RUN domain-containing protein 3A protein-coding 625871163 Kif18a kinesin family member 18A ENCODES a protein that exhibits actin binding (ortholog); microtubule binding (ortholog); microtubule plus-end binding (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); male meiotic nuclear division (ortholog); microtubule depolymerization (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); stomach cancer (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); intercellular bridge (ortholog) 5 87593678 87649835 + 22301074;30032202 116901724 MODEL JAAIVD010000023;XM_032903860 XP_032759751 kinesin-like protein KIF18A protein-coding 625871184 Proser1 proline and serine rich 1 3 100963681 100983325 - 116896878 MODEL JAAIVD010000012;XM_032898424 XP_032754315 proline and serine-rich protein 1 protein-coding 625871201 LOC116901346 tubulin polyglutamylase TTLL11-like 5 13672489 13720171 + 116901346 MODEL JAAIVD010000023;XM_032903182 XP_032759073 protein-coding 625871208 Prrt3 proline rich transmembrane protein 3 6 33032870 33041208 + 116903407 MODEL JAAIVD010000024;XM_032905921 XP_032761812 proline-rich transmembrane protein 3 protein-coding 625871216 LOC116898337 pyruvate kinase PKM-like 4 45657024 45658685 + 116898337 MODEL JAAIVD010000003 pseudo 625871217 Trnah-gug transfer RNA histidin (anticodon GUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889712 MODEL JAAIVD010000059 trna 625871218 Rpl22l1 ribosomal protein L22 like 1 3 125868417 125873760 - 22301074;30032202 116895932 MODEL JAAIVD010000012;XM_032897002 XP_032752893 60S ribosomal protein L22-like 1 protein-coding 625871226 Rhoj ras homolog family member J ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); positive regulation of cell migration involved in sprouting angiogenesis (ortholog); regulation of cell shape (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); Colonic Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) 7 89480783 89565994 + 22301074;30032202 116905171 MODEL JAAIVD010000026;XM_032907945 XP_032763836 rho-related GTP-binding protein RhoJ protein-coding 625871235 LOC116883274 60S ribosomal protein L30-like 14 74741801 74742717 - 116883274 MODEL JAAIVD010000009 pseudo 625871236 Zscan18 zinc finger and SCAN domain containing 18 2 174426472 174441339 + 116892636 MODEL JAAIVD010000001;XM_032894456 XP_032750347 zinc finger and SCAN domain-containing protein 18 protein-coding 625871249 Galnt1 polypeptide N-acetylgalactosaminyltransferase 1 ENCODES a protein that exhibits manganese ion binding (ortholog); polypeptide N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation (ortholog); protein O-linked glycosylation via N-acetyl-galactosamine (ortholog); ASSOCIATED WITH heart valve disease (ortholog); FOUND IN Golgi apparatus (ortholog); perinuclear region of cytoplasm (ortholog) 15 19567927 19612786 - 30032202 116884992 MODEL JAAIVD010000010;XM_032886218 XP_032742109 protein-coding 625871265 Pole2 DNA polymerase epsilon 2, accessory subunit INVOLVED IN DNA-templated DNA replication (ortholog); PARTICIPATES IN nucleotide excision repair pathway; FOUND IN epsilon DNA polymerase complex (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 7 82862022 82886596 - 22301074;30032202 116905115 MODEL JAAIVD010000026;XM_032907854 XP_032763745 DNA polymerase epsilon subunit 2 protein-coding 625871288 Atg13 autophagy related 13 ENCODES a protein that exhibits kinase activator activity (ortholog); protein kinase binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); mitophagy (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN autophagy pathway; mTOR signaling pathway; ASSOCIATED WITH Liver Reperfusion Injury (ortholog); prostate cancer (ortholog); FOUND IN Atg1/ULK1 kinase complex (ortholog); cytosol (ortholog); mitochondrion (ortholog) 5 65819514 65854600 - 22301074;30032202 116901627 MODEL JAAIVD010000023;XM_032903698;XM_032903699;XM_032903700;XM_032903701;XM_032903702;XM_032903703;XM_032903704 XP_032759589;XP_032759590;XP_032759591;XP_032759592;XP_032759593;XP_032759594;XP_032759595 autophagy-related protein 13 protein-coding 625871325 LOC116912013 ER lumen protein-retaining receptor 1-like 11 60598567 60599153 - 116912013 MODEL JAAIVD010000006 pseudo 625871326 LOC116905432 60S ribosomal protein L3-like 7 122301593 122302885 - 22301074;30032202 116905432 MODEL JAAIVD010000026;XM_032908378 XP_032764269 protein-coding 625871331 LOC116900345 olfactory receptor 10AG1-like 5 68955568 68956512 + 22301074 116900345 MODEL JAAIVD010000023;XM_032902099 XP_032757990 protein-coding 625871334 LOC116902219 heat shock cognate 71 kDa protein-like 5 136518830 136520934 - 116902219 MODEL JAAIVD010000023;XR_004388051 pseudo 625871337 Tfg trafficking from ER to golgi regulator ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease type 2 (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum exit site (ortholog) 4 40788027 40809959 - 30032202 116898905 MODEL JAAIVD010000003;XM_032900307;XM_032900308;XM_032900309;XM_032900310;XM_032900311 XP_032756198;XP_032756199;XP_032756200;XP_032756201;XP_032756202 protein TFG protein-coding 625871359 LOC116907074 uncharacterized LOC116907074 8 88151286 88159504 + 116907074 MODEL JAAIVD010000027;XR_004388803 ncrna 625871363 Nfkbiz NFKB inhibitor zeta ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); transcription coregulator activity (ortholog); INVOLVED IN adaptive immune response (ortholog); B cell proliferation (ortholog); B cell receptor apoptotic signaling pathway (ortholog); ASSOCIATED WITH atopic dermatitis (ortholog); Experimental Liver Cirrhosis (ortholog); Stevens-Johnson syndrome (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) 4 39914855 39925700 - 22301074;30032202 116898893 MODEL JAAIVD010000003;XM_032900291 XP_032756182 NF-kappa-B inhibitor zeta protein-coding 625871379 LOC116887446 rano class II histocompatibility antigen, B alpha chain 18 7934227 7938569 + 22301074;30032202 116887446 MODEL JAAIVD010000013;XM_032889056 XP_032744947 protein-coding 625871387 Olfm3 olfactomedin 3 INVOLVED IN eye photoreceptor cell development (ortholog); ASSOCIATED WITH strabismus (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); extracellular region (ortholog); Golgi apparatus (ortholog) 3 44553579 44593840 - 30032202 116896342 MODEL JAAIVD010000012;XM_032897444 XP_032753335 noelin-3 protein-coding 625871397 Rab22a RAB22A, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN endocytosis (ortholog); endosome organization (ortholog); regulation of vesicle size (ortholog); FOUND IN actin cytoskeleton (ortholog); early endosome (ortholog); phagocytic vesicle (ortholog) 5 144275351 144315966 - 22301074 116902273 MODEL JAAIVD010000023;XM_032904706 XP_032760597 ras-related protein Rab-22A protein-coding 625871408 Cfap161 cilia and flagella associated protein 161 INVOLVED IN flagellated sperm motility (ortholog); gene expression (ortholog); motile cilium assembly (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); axoneme (ortholog) 2 116543573 116568505 + 30032202 116894262 MODEL JAAIVD010000001;XM_032895967 XP_032751858 cilia- and flagella-associated protein 161 protein-coding 625871419 Glt8d2 glycosyltransferase 8 domain containing 2 ASSOCIATED WITH Marfanoid Mental Retardation Syndrome, Autosomal (ortholog) 1 165763454 165785096 + 22301074;30032202 116907653 MODEL JAAIVD010000025;XM_032910747 XP_032766638 glycosyltransferase 8 domain-containing protein 2 protein-coding 625871432 Neil2 nei like DNA glycosylase 2 ENCODES a protein that exhibits microtubule binding (ortholog); ASSOCIATED WITH High Myopia (ortholog); FOUND IN cytoplasm (ortholog); microtubule cytoskeleton (ortholog); mitotic spindle (ortholog) 12 61186770 61194813 + 22301074;30032202 116913457 MODEL JAAIVD010000007;XM_032917659 XP_032773550 endonuclease 8-like 2 protein-coding 625871440 Mff mitochondrial fission factor ENCODES a protein that exhibits GTPase binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); mitochondrial fission (ortholog); mitochondrion organization (ortholog); PARTICIPATES IN mitochondria fission pathway; ASSOCIATED WITH encephalopathy due to defective mitochondrial and peroxisomal fission 2 (ortholog); genetic disease (ortholog); left ventricular failure (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 4 155581225 155609464 + 30032202 116899565 MODEL JAAIVD010000003;XM_032901462;XM_032901463;XM_032901464;XM_032901465;XM_032901466;XM_032901467;XM_032901468;XM_032901469;XM_032901470;XM_032901471;XM_032901472;XM_032901474;XM_032901475;XM_032901476 XP_032757353;XP_032757354;XP_032757355;XP_032757356;XP_032757357;XP_032757358;XP_032757359;XP_032757360;XP_032757361;XP_032757362;XP_032757363;XP_032757365;XP_032757366;XP_032757367 protein-coding 625871474 LOC116896040 spliceosome-associated protein CWC27 homolog 3 192623925 192732702 + 116896040 MODEL JAAIVD010000012;XM_032897041 XP_032752932 protein-coding 625871482 LOC116898569 UDP-glucuronosyltransferase 1-9-like 4 160140961 160144846 + 22301074 116898569 MODEL JAAIVD010000003;XM_032899776 XP_032755667 protein-coding 625871486 C1H1orf174 chromosome 1 C1orf174 homolog FOUND IN nucleoplasm (ortholog) 1 6757911 6762527 - 116892184 MODEL JAAIVD010000025;XM_032893709 XP_032749600 UPF0688 protein C1orf174 homolog protein-coding 625871494 LOC116888951 ADP-ribosylation factor-like protein 2-binding protein X 4296758 4297247 - 116888951 MODEL JAAIVD010000014 pseudo 625871495 Uros uroporphyrinogen III synthase ENCODES a protein that exhibits folic acid binding (ortholog); uroporphyrinogen-III synthase activity (ortholog); INVOLVED IN cellular response to amine stimulus (ortholog); cellular response to arsenic-containing substance (ortholog); heme A biosynthetic process (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; heme biosynthetic pathway; ASSOCIATED WITH cutaneous porphyria (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog) 2 68169314 68191428 + 22301074;30032202 116891387 MODEL JAAIVD010000001;XM_032892402;XM_032892403 XP_032748293;XP_032748294 uroporphyrinogen-III synthase protein-coding 625871512 LOC116893534 heterogeneous nuclear ribonucleoprotein A1-like 2 200714089 200808771 + 116893534 MODEL JAAIVD010000001 pseudo 625871513 LOC116914971 pleckstrin homology domain-containing family F member 2-like 13 19669326 19674446 + 116914971 MODEL JAAIVD010000008 pseudo 625871514 LOC116900555 olfactory receptor 4K3-like 5 89932213 89933151 + 22301074 116900555 MODEL JAAIVD010000023;XM_032902281 XP_032758172 protein-coding 625871517 Zmiz2 zinc finger MIZ-type containing 2 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); SMAD protein signal transduction (ortholog); transforming growth factor beta receptor signaling pathway (ortholog); ASSOCIATED WITH Infant Death (ortholog); FOUND IN nuclear replication fork (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 11 75313587 75330513 + 22301074;30032202 116912218 MODEL JAAIVD010000006;XM_032916167;XM_032916168;XM_032916169;XM_032916170;XM_032916171;XM_032916172;XM_032916173 XP_032772058;XP_032772059;XP_032772060;XP_032772061;XP_032772062;XP_032772063;XP_032772064 zinc finger MIZ domain-containing protein 2 protein-coding 625871555 Rmi1 RecQ mediated genome instability 1 INVOLVED IN double-strand break repair via homologous recombination (ortholog); glucose homeostasis (ortholog); multicellular organism growth (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); COVID-19 (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) 14 79725891 79732879 - 22301074;30032202 116884032 MODEL JAAIVD010000009;XM_032885266;XM_032885267;XM_032885268 XP_032741157;XP_032741158;XP_032741159 recQ-mediated genome instability protein 1 protein-coding 625871568 LOC116914922 histone H3.3C-like 13 1881172 1881563 + 116914922 MODEL JAAIVD010000008 pseudo 625871569 Rora RAR related orphan receptor A ENCODES a protein that exhibits beta-catenin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to hypoxia (ortholog); cellular response to interleukin-1 (ortholog); ASSOCIATED WITH acute myocardial infarction (ortholog); allergic rhinitis (ortholog); autistic disorder (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) 8 62996100 63719057 + 22301074;30032202 116906594 MODEL JAAIVD010000027;XM_032909335;XM_032909336;XM_032909337 XP_032765226;XP_032765227;XP_032765228 nuclear receptor ROR-alpha protein-coding 625871588 Tubal3 tubulin alpha like 3 14 18236000 18247710 + 22301074;30032202 116883876 MODEL JAAIVD010000009;XM_032885142 XP_032741033 tubulin alpha chain-like 3 protein-coding 625871596 LOC116904434 uncharacterized LOC116904434 6 117913351 117927912 - 116904434 MODEL JAAIVD010000024;XM_032907265 XP_032763156 uncharacterized protein LOC116904434 protein-coding 625871602 Keap1 kelch like ECH associated protein 1 ENCODES a protein that exhibits disordered domain specific binding (ortholog); identical protein binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN cellular response to carbohydrate stimulus (ortholog); cellular response to interleukin-4 (ortholog); cellular response to oxidative stress (ortholog); PARTICIPATES IN nuclear factor, erythroid 2 like 2 signaling pathway; ASSOCIATED WITH alcohol-associated liver disease (ortholog); amyotrophic lateral sclerosis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN actin filament (ortholog); adherens junction (ortholog); Cul3-RING ubiquitin ligase complex (ortholog) 8 17492211 17501358 - 30032202 116906876 MODEL JAAIVD010000027;XM_032909788;XM_032909789 XP_032765679;XP_032765680 kelch-like ECH-associated protein 1 protein-coding 625871615 LOC116898310 T-cell receptor-associated transmembrane adapter 1 INVOLVED IN negative regulation of receptor recycling (ortholog); negative regulation of transport (ortholog); positive regulation of calcium-mediated signaling (ortholog); FOUND IN centriolar satellite (ortholog); plasma membrane (ortholog); T cell receptor complex (ortholog) 4 33247034 33263682 - 30032202 116898310 MODEL JAAIVD010000003;XM_032899652 XP_032755543 protein-coding 625871623 LOC116900443 olfactory receptor 4C15-like 5 70862172 70863110 - 22301074 116900443 MODEL JAAIVD010000023;XM_032902183 XP_032758074 protein-coding 625871627 Capzb capping actin protein of muscle Z-line subunit beta ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); beta-tubulin binding (ortholog); INVOLVED IN actin polymerization or depolymerization (ortholog); activation of protein kinase C activity (ortholog); barbed-end actin filament capping (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); FOUND IN brush border (ortholog); cortical cytoskeleton (ortholog); dendritic spine (ortholog) 1 18905789 19005456 - 22301074;30032202 116893735 MODEL JAAIVD010000025;XM_032895451;XM_032895454 XP_032751342;XP_032751345 F-actin-capping protein subunit beta protein-coding 625871645 LOC116893437 glyceraldehyde-3-phosphate dehydrogenase-like 2 176082583 176099819 + 116893437 MODEL JAAIVD010000001 pseudo 625871646 LOC116889560 U2 spliceosomal RNA X 37767418 37767492 - 116889560 MODEL JAAIVD010000014 pseudo 625871647 LOC116890415 U7 small nuclear RNA 1 168508389 168508450 + 116890415 MODEL JAAIVD010000025;XR_004386616 snrna 625871650 Sdr39u1 short chain dehydrogenase/reductase family 39U member 1 FOUND IN mitochondrion (ortholog) 12 69121386 69124326 + 116913344 MODEL JAAIVD010000007;XM_032917495;XM_032917496 XP_032773386;XP_032773387 epimerase family protein SDR39U1 protein-coding 625871663 Elf5 E74 like ETS transcription factor 5 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN ectoderm development (ortholog); ectodermal cell fate commitment (ortholog); mammary gland epithelial cell differentiation (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 5 81255855 81281950 + 22301074;30032202 116900515 MODEL JAAIVD010000023;XM_032902244;XM_032902245 XP_032758135;XP_032758136 ETS-related transcription factor Elf-5 protein-coding 625871676 LOC116910266 uncharacterized LOC116910266 9 33812242 33829999 + 116910266 MODEL JAAIVD010000002;XM_032914150 XP_032770041 uncharacterized protein LOC116910266 protein-coding 625871683 Rassf3 Ras association domain family member 3 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); FOUND IN cytosol (ortholog) 1 199429117 199901288 - 22301074;30032202 116909509 MODEL JAAIVD010000025;XM_032913117 XP_032769008 ras association domain-containing protein 3 protein-coding 625871692 Mink1 misshapen like kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); brain development (ortholog); chemical synaptic transmission (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); Golgi apparatus (ortholog) 9 50176513 50229092 + 22301074 116910537 MODEL JAAIVD010000002;XM_032914444 XP_032770335 misshapen-like kinase 1 protein-coding 625871729 Abhd16b abhydrolase domain containing 16B FOUND IN nucleoplasm (ortholog) 5 158578412 158580336 + 30032202 116902442 MODEL JAAIVD010000023;XM_032904983 XP_032760874 protein ABHD16B protein-coding 625871734 Klhl4 kelch like family member 4 FOUND IN cilium (ortholog); intercellular bridge (ortholog); microtubule cytoskeleton (ortholog) X 53002404 53084243 + 22301074 116889100 MODEL JAAIVD010000014;XM_032890268;XM_032890269 XP_032746159;XP_032746160 kelch-like protein 4 protein-coding 625871751 LOC116906174 transformer-2 protein homolog alpha-like 7 106335292 106337014 - 116906174 MODEL JAAIVD010000026 pseudo 625871752 LOC116904559 killer cell lectin-like receptor subfamily E member 1 6 18013691 18021774 - 30032202 116904559 MODEL JAAIVD010000024;XM_032907353;XM_032907354 XP_032763244;XP_032763245 protein-coding 625871768 Il17f interleukin 17F ENCODES a protein that exhibits cytokine activity (ortholog); cytokine binding (ortholog); cytokine receptor binding (ortholog); INVOLVED IN cartilage development (ortholog); defense response to Gram-negative bacterium (ortholog); defense response to Gram-positive bacterium (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); allergic asthma (ortholog); allergic rhinitis (ortholog); FOUND IN extracellular region (ortholog) 4 98143131 98154596 - 22301074 116898104 MODEL JAAIVD010000003;XM_032899489 XP_032755380 interleukin-17F protein-coding 625871777 Ctnnd2 catenin delta 2 ENCODES a protein that exhibits beta-catenin binding (ortholog); structural constituent of postsynaptic density (ortholog); INVOLVED IN dendritic spine morphogenesis (ortholog); learning (ortholog); morphogenesis of a branching structure (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); developmental and epileptic encephalopathy 11 (ortholog); genetic disease (ortholog); FOUND IN glutamatergic synapse (ortholog); perikaryon (ortholog); postsynaptic density (ortholog) 3 149788323 150184779 - 30032202 116897053 MODEL JAAIVD010000012;XM_032898675 XP_032754566 catenin delta-2 protein-coding 625871801 Atp6v1f ATPase H+ transporting V1 subunit F ENCODES a protein that exhibits proton transmembrane transporter activity (ortholog); INVOLVED IN synaptic vesicle lumen acidification (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN extrinsic component of synaptic vesicle membrane (ortholog); membrane (ortholog); proton-transporting V-type ATPase complex (ortholog) 6 110096672 110099386 - 22301074;30032202 116904015 MODEL JAAIVD010000024;XM_032906836 XP_032762727 V-type proton ATPase subunit F protein-coding 625871807 LOC116887341 pyridoxal kinase 18 1764605 1788304 + 22301074;30032202 116887341 MODEL JAAIVD010000013;XM_032888934 XP_032744825 protein-coding 625871822 Cstf2 cleavage stimulation factor subunit 2 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); mRNA 3'-end processing (ortholog); regulation of mRNA 3'-end processing (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; ASSOCIATED WITH X-Linked Intellectual Developmental Disorder 113 (ortholog); FOUND IN cleavage body (ortholog); mRNA cleavage and polyadenylation specificity factor complex (ortholog); nuclear body (ortholog) X 86385575 86410709 + 30032202 116888382 MODEL JAAIVD010000014;XM_032889658 XP_032745549 protein-coding 625871840 LOC116894062 olfactory receptor 51H1 2 102851816 102852766 - 22301074 116894062 MODEL JAAIVD010000001;XM_032895785 XP_032751676 protein-coding 625871843 LOC116906391 small nucleolar RNA SNORD113/SNORD114 family 7 127204009 127204090 + 116906391 MODEL JAAIVD010000026 pseudo 625871844 Cldn10 claudin 10 ENCODES a protein that exhibits identical protein binding (ortholog); paracellular tight junction channel activity (ortholog); INVOLVED IN paracellular transport (ortholog); regulation of monoatomic ion transport (ortholog); ASSOCIATED WITH genetic disease (ortholog); HELIX syndrome (ortholog); hypokalemia (ortholog); FOUND IN bicellular tight junction (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) 12 7040685 7130615 - 22301074;30032202 116913721 MODEL JAAIVD010000007;XM_032918022;XM_032918023;XM_032918024;XM_032918025 XP_032773913;XP_032773914;XP_032773915;XP_032773916 claudin-10 protein-coding 625871859 LOC116889835 elongin-B-like 22301074;30032202 116889835 MODEL JAAIVD010001623;XM_032890670 XP_032746561 protein-coding 625871860 LOC116914026 40S ribosomal protein S29-like 12 48066798 48066968 + 22301074;30032202 116914026 MODEL JAAIVD010000007;XM_032918290 XP_032774181 protein-coding 625871863 Cphxl cytoplasmic polyadenylated homeobox like 17 19154097 19162532 - 22301074 116886639 MODEL JAAIVD010000011;XM_032888142 XP_032744033 cytoplasmic polyadenylated homeobox-like protein-coding 625871868 LOC116886430 uncharacterized LOC116886430 17 17687251 17710291 + 116886430 MODEL JAAIVD010000011;XR_004386103 ncrna 625871873 LOC116906177 60S ribosomal protein L18a-like 7 107747294 107784662 - 116906177 MODEL JAAIVD010000026 pseudo 625871874 LOC116903674 transcription elongation factor A protein 1-like 6 4891371 4892228 + 116903674 MODEL JAAIVD010000024 pseudo 625871875 Rimkla ribosomal modification protein rimK like family member A ENCODES a protein that exhibits N-acetyl-L-aspartate-L-glutamate ligase activity (ortholog); FOUND IN cytoplasm (ortholog) 1 37471137 37492454 + 22301074;30032202 116897446 MODEL JAAIVD010000025;XM_032899135 XP_032755026 N-acetylaspartylglutamate synthase A protein-coding 625871884 Zbtb16 zinc finger and BTB domain containing 16 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); cartilage development (ortholog); central nervous system development (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT2 receptor; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); acute promyelocytic leukemia with PLZF/RARA (ortholog); caudal regression syndrome (ortholog); FOUND IN nuclear body (ortholog); nuclear speck (ortholog); nucleus (ortholog) 8 43145301 43324830 - 22301074;30032202 116906553 MODEL JAAIVD010000027;XM_032909267;XM_032909268 XP_032765158;XP_032765159 zinc finger and BTB domain-containing protein 16 protein-coding 625871900 Fem1c fem-1 homolog C ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ubiquitin-dependent protein catabolic process via the C-end degron rule pathway (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); nucleoplasm (ortholog) 15 40525872 40550680 + 22301074 116884456 MODEL JAAIVD010000010;XM_032885555 XP_032741446 protein fem-1 homolog C protein-coding 625871907 LOC116896944 uncharacterized LOC116896944 3 119153204 119327832 - 116896944 MODEL JAAIVD010000012;XR_004387380;XR_004387381;XR_004387382 ncrna 625871918 LOC116909428 olfactory receptor 1468-like 9 31734889 31735827 - 22301074;30032202 116909428 MODEL JAAIVD010000002;XM_032913003 XP_032768894 protein-coding 625871921 Aspscr1 ASPSCR1 tether for SLC2A4, UBX domain containing ENCODES a protein that exhibits methyltransferase regulator activity (ortholog); INVOLVED IN glucose homeostasis (ortholog); intracellular protein transport (ortholog); peptidyl-lysine trimethylation (ortholog); ASSOCIATED WITH alveolar soft part sarcoma (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 9 63309993 63349624 - 22301074 116908960 MODEL JAAIVD010000002;XM_032912419;XM_032912420 XP_032768310;XP_032768311 tether containing UBX domain for GLUT4 protein-coding 625871944 Tspan7 tetraspanin 7 INVOLVED IN regulation of postsynaptic neurotransmitter receptor internalization (ortholog); ASSOCIATED WITH intellectual disability (ortholog); non-syndromic X-linked intellectual disability 58 (ortholog); FOUND IN postsynapse (ortholog) X 10683062 10783747 - 22301074;30032202 116889214 MODEL JAAIVD010000014;XM_032890365 XP_032746256 tetraspanin-7 protein-coding 625871956 LOC116900859 olfactory receptor 8H1-like 5 63955563 63957275 - 22301074;30032202 116900859 MODEL JAAIVD010000023;XM_032902546 XP_032758437 protein-coding 625871960 LOC116890055 60S ribosomal protein L27a-like 1 210079328 210079764 + 116890055 MODEL JAAIVD010000025 pseudo 625871961 Khnyn KH and NYN domain containing 12 69126457 69136802 - 30032202 116913343 MODEL JAAIVD010000007;XM_032917493;XM_032917494;XR_004389609 XP_032773384;XP_032773385 protein KHNYN protein-coding 625871982 LOC116895509 40S ribosomal protein S21-like 3 111754006 111754260 + 22301074;30032202 116895509 MODEL JAAIVD010000012;XM_032896758 XP_032752649 protein-coding 625871985 LOC116900914 protein MAK16 homolog 5 78725731 78726380 + 116900914 MODEL JAAIVD010000023 pseudo 625871986 Chic2 cysteine rich hydrophobic domain 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi-associated vesicle (ortholog); plasma membrane (ortholog) 11 31781244 31816567 - 116912077 MODEL JAAIVD010000006;XM_032915956 XP_032771847 cysteine-rich hydrophobic domain-containing protein 2 protein-coding 625871996 LOC116892026 leukosialin-like 2 139570844 139572067 - 30032202 116892026 MODEL JAAIVD010000001;XM_032893484 XP_032749375 protein-coding 625872001 LOC116901048 60S ribosomal protein L7-like 5 133584180 133584967 - 116901048 MODEL JAAIVD010000023 pseudo 625872002 Slc25a28 solute carrier family 25 member 28 ENCODES a protein that exhibits ferrous iron transmembrane transporter activity (ortholog); PARTICIPATES IN iron uptake pathway; FOUND IN mitochondrion (ortholog) 2 43183853 43195029 - 30032202 116891195 MODEL JAAIVD010000001;XM_032892016;XM_032892017;XM_032892019 XP_032747907;XP_032747908;XP_032747910 mitoferrin-2 protein-coding 625872015 Upk3a uroplakin 3A INVOLVED IN cell morphogenesis (ortholog); epithelial cell differentiation (ortholog); kidney development (ortholog); ASSOCIATED WITH CAKUT1 (ortholog); renal agenesis (ortholog); Renal Hypodysplasia/Aplasia 1 (ortholog); FOUND IN apical plasma membrane (ortholog); apical plasma membrane urothelial plaque (ortholog) 1 254393989 254399035 + 116890165 MODEL JAAIVD010000025;XM_032890900 XP_032746791 uroplakin-3a protein-coding 625872025 Il7r interleukin 7 receptor ENCODES a protein that exhibits cytokine receptor activity (ortholog); interleukin-7 receptor activity (ortholog); INVOLVED IN B cell proliferation (ortholog); cell morphogenesis (ortholog); cellular homeostasis (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); colon cancer (ortholog); COVID-19 (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) 3 171164655 171187524 + 22301074;30032202 116897131 MODEL JAAIVD010000012;XM_032898793 XP_032754684 interleukin-7 receptor subunit alpha protein-coding 625872036 Gpr45 G protein-coupled receptor 45 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); protein carrier activity (ortholog); INVOLVED IN protein localization to non-motile cilium (ortholog); FOUND IN ciliary membrane (ortholog) 4 119182093 119188202 + 22301074;30032202 116899339 MODEL JAAIVD010000003;XM_032901026 XP_032756917 probable G-protein coupled receptor 45 protein-coding 625872041 LOC116887598 serine/arginine-rich splicing factor 6-like 18 9312987 9323840 + 116887598 MODEL JAAIVD010000013 pseudo 625872042 LOC116899866 small nucleolar RNA SNORA17 4 96549534 96549661 - 116899866 MODEL JAAIVD010000003;XR_004387860 snorna 625872045 Ccin calicin INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH spermatogenic failure 91 (ortholog); FOUND IN cytoskeletal calyx (ortholog); perinuclear theca (ortholog); sperm glycocalyx (ortholog) 1 2540481 2542391 - 22301074 116885767 MODEL JAAIVD010000025;XM_032887087 XP_032742978 protein-coding 625872050 LOC116914246 uncharacterized LOC116914246 13 9418165 9419555 + 116914246 MODEL JAAIVD010000008;XR_004389737 ncrna 625872055 LOC116911625 AP-3 complex subunit sigma-1-like 10 32244227 32249042 + 116911625 MODEL JAAIVD010000005 pseudo 625872056 Psmc3 proteasome 26S subunit, ATPase 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN blastocyst development (ortholog); host-mediated perturbation of viral transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH cataract (ortholog); DEAFNESS, CATARACT, IMPAIRED INTELLECTUAL DEVELOPMENT, AND POLYNEUROPATHY (ortholog); Developmental Disabilities (ortholog); FOUND IN nucleus (ortholog); P-body (ortholog); perinuclear region of cytoplasm (ortholog) 5 65222466 65227836 + 22301074;30032202;9473711 116901608 MODEL AB005895;JAAIVD010000023;XM_032903645 BAE97632;XP_032759536 TBP-1 26S proteasome regulatory subunit 6A;Tat-binding protein-1 protein-coding 625872072 Shroom2 shroom family member 2 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); beta-catenin binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); cell migration (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH Meniere's disease (ortholog); FOUND IN adherens junction (ortholog); apical junction complex (ortholog); apical plasma membrane (ortholog) X 6228154 6386193 + 22301074;30032202 116888425 MODEL JAAIVD010000014;XM_032889695 XP_032745586 protein Shroom2 protein-coding 625872086 LOC116887280 phenazine biosynthesis-like domain-containing protein 2 18 23628124 23680987 - 22301074;30032202 116887280 MODEL JAAIVD010000013;XM_032888860 XP_032744751 protein-coding 625872100 LOC116909539 40S ribosomal protein S23-like 9 71645635 71646144 - 116909539 MODEL JAAIVD010000002 pseudo 625872101 LOC116906824 olfactory receptor 1078-like 1 156731511 156732440 - 22301074;30032202 116906824 MODEL JAAIVD010000025;XM_032909708 XP_032765599 protein-coding 625872104 Rcor1 REST corepressor 1 ENCODES a protein that exhibits chromatin binding (ortholog); enzyme binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH Colonic Neoplasms (ortholog); Joubert syndrome (ortholog); FOUND IN DNA repair complex (ortholog); histone methyltransferase complex (ortholog); nucleoplasm (ortholog) 7 128612549 128687760 + 22301074;30032202 116905485 MODEL JAAIVD010000026;XM_032908482 XP_032764373 protein-coding 625872120 LOC116901897 uncharacterized LOC116901897 5 102443715 102823878 + 116901897 MODEL JAAIVD010000023;XR_004388029 ncrna 625872126 Ovca2 OVCA2 serine hydrolase domain containing ENCODES a protein that exhibits carboxylesterase activity (ortholog); INVOLVED IN response to retinoic acid (ortholog); ASSOCIATED WITH ovarian cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 9 93900524 93901765 - 30032202 116910545 MODEL JAAIVD010000002;XM_032914452 XP_032770343 esterase OVCA2 protein-coding 625872132 LOC116914050 snRNA-activating protein complex subunit 5-like 12 87818395 87818582 + 116914050 MODEL JAAIVD010000007 pseudo 625872133 LOC116897427 U6 spliceosomal RNA 3 46502975 46503077 - 116897427 MODEL JAAIVD010000012;XR_004387468 snrna 625872136 LOC116897863 ran-specific GTPase-activating protein-like 4 21087374 21088186 - 22301074;30032202 116897863 MODEL JAAIVD010000003;XM_032899271 XP_032755162 protein-coding 625872141 LOC116900353 olfactory receptor 5W2-like 5 69219501 69220436 + 22301074;30032202 116900353 MODEL JAAIVD010000023;XM_032902107 XP_032757998 protein-coding 625872145 LOC116910265 zinc finger protein 354A 9 33723417 33737688 + 22301074;30032202 116910265 MODEL JAAIVD010000002;XM_032914148 XP_032770039 protein-coding 625872152 Wasl WASP like actin nucleation promoting factor ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament polymerization (ortholog); dendritic spine morphogenesis (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; epidermal growth factor/neuregulin signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH atopic dermatitis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN actin cap (ortholog); cell leading edge (ortholog); cytoplasmic vesicle (ortholog) 6 114678779 114727518 + 22301074;30032202;9322739 116904033 MODEL D88461;JAAIVD010000024;XM_032906868 BAA21534;XP_032762759 neural Wiskott-Aldrich syndrome protein protein-coding 625872167 LOC116914341 circumsporozoite protein-like 13 50980089 50986907 - 116914341 MODEL JAAIVD010000008;XM_032918561 XP_032774452 protein-coding 625872173 Fam133b family with sequence similarity 133 member B FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 6 135809292 135836206 + 116904113 MODEL JAAIVD010000024;XM_032906992;XM_032906993 XP_032762883;XP_032762884 protein FAM133B protein-coding 625872189 LOC116898562 uncharacterized LOC116898562 4 157633504 157636151 + 116898562 MODEL JAAIVD010000003;XM_032899769 XP_032755660 uncharacterized protein LOC116898562 protein-coding 625872195 LOC116888977 PC4 and SFRS1-interacting protein-like X 10890564 10929347 + 116888977 MODEL JAAIVD010000014 pseudo 625872196 LOC116904654 U6 spliceosomal RNA 6 44470439 44470552 - 116904654 MODEL JAAIVD010000024 pseudo 625872197 Rpl30 ribosomal protein L30 ENCODES a protein that exhibits selenocysteine insertion sequence binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cytoplasmic translation (ortholog); liver regeneration (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH herpes simplex (ortholog); FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog) 1 208140642 208143715 - 22301074;30032202 116910470 MODEL JAAIVD010000025;XM_032914346 XP_032770237 60S ribosomal protein L30 protein-coding 625872206 LOC116902660 U6 spliceosomal RNA 5 17321796 17321902 - 116902660 MODEL JAAIVD010000023;XR_004388222 snrna 625872209 LOC116902805 putative vomeronasal receptor-like protein 4 6 83755054 83755995 + 22301074;30032202 116902805 MODEL JAAIVD010000024;XM_032905139 XP_032761030 protein-coding 625872213 Znf483 zinc finger protein 483 1 92479354 92492332 - 30032202 116901580 MODEL JAAIVD010000025;XM_032903582;XM_032903593;XM_032903600;XM_032903608 XP_032759473;XP_032759484;XP_032759491;XP_032759499 protein-coding 625872232 Popdc1 popeye domain cAMP effector 1 ENCODES a protein that exhibits cAMP binding (ortholog); structural molecule activity (ortholog); INVOLVED IN cell migration involved in heart development (ortholog); epithelial cell-cell adhesion (ortholog); heart development (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2X (ortholog); genetic disease (ortholog); limb-girdle muscular dystrophy (ortholog); FOUND IN bicellular tight junction (ortholog); caveola (ortholog); cell junction (ortholog) 3 219221836 219256636 + 30032202 116895715 MODEL JAAIVD010000012;XM_032896902 XP_032752793 Bves blood vessel epicardial substance protein-coding 625872243 LOC116898058 glyceraldehyde-3-phosphate dehydrogenase-like 4 87164529 87165509 - 116898058 MODEL JAAIVD010000003 pseudo 625872244 Pard6g par-6 family cell polarity regulator gamma PARTICIPATES IN protein kinase C (PKC) signaling pathway; FOUND IN protein-containing complex (ortholog) 15 52115666 52184932 - 30032202 116884257 MODEL JAAIVD010000010;XM_032885341 XP_032741232 partitioning defective 6 homolog gamma protein-coding 625872251 LOC116907337 HAUS augmin-like complex subunit 8 8 31934101 31948936 - 116907337 MODEL JAAIVD010000027 pseudo 625872252 LOC116883546 prolactin-8A9-like 14 46454226 46462225 - 22301074;30032202 116883546 MODEL JAAIVD010000009;XM_032884716;XM_032884717 XP_032740607;XP_032740608 protein-coding 625872266 Kat8 lysine acetyltransferase 8 ENCODES a protein that exhibits acetyltransferase activity (ortholog); enzyme binding (ortholog); histone H4 acetyltransferase activity (ortholog); INVOLVED IN dosage compensation by inactivation of X chromosome (ortholog); myeloid cell differentiation (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; p53 signaling pathway; ASSOCIATED WITH breast cancer (ortholog); Cardiomegaly (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN chromosome (ortholog); histone acetyltransferase complex (ortholog); kinetochore (ortholog) 2 73979103 73991276 - 22301074 116891447 MODEL JAAIVD010000001;XM_032892513 XP_032748404 histone acetyltransferase KAT8 protein-coding 625872281 Farsa phenylalanyl-tRNA synthetase subunit alpha ENCODES a protein that exhibits phenylalanine-tRNA ligase activity (ortholog); INVOLVED IN phenylalanyl-tRNA aminoacylation (ortholog); protein heterotetramerization (ortholog); PARTICIPATES IN phenylketonuria pathway; tyrosinemia type II pathway; tyrosinemia type III pathway; ASSOCIATED WITH Rajab Interstitial Lung Disease with Brain Calcifications 2 (ortholog); FOUND IN cytoplasm (ortholog); phenylalanine-tRNA ligase complex (ortholog) 17 15425203 15436650 - 22301074;30032202 116886399 MODEL JAAIVD010000011;XM_032887869 XP_032743760 phenylalanine--tRNA ligase alpha subunit protein-coding 625872298 LOC116884128 U6 spliceosomal RNA 14 75263167 75263265 + 116884128 MODEL JAAIVD010000009 pseudo 625872299 Tnc tenascin C ENCODES a protein that exhibits identical protein binding (ortholog); integrin binding (ortholog); syndecan binding (ortholog); INVOLVED IN bud outgrowth involved in lung branching (ortholog); cellular response to prostaglandin D stimulus (ortholog); cellular response to retinoic acid (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH allergic asthma (ortholog); allergic conjunctivitis (ortholog); Allergic Rhinoconjunctivitis (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular matrix of synaptic cleft (ortholog) 1 89557438 89641373 + 22301074 116901211 MODEL JAAIVD010000025;XM_032902931;XM_032902939;XM_032902948;XM_032902958 XP_032758822;XP_032758830;XP_032758839;XP_032758849 tenascin protein-coding 625872333 Me2 malic enzyme 2 ENCODES a protein that exhibits malate dehydrogenase (decarboxylating) (NAD+) activity (ortholog); malic enzyme activity (ortholog); INVOLVED IN regulation of NADP metabolic process (ortholog); PARTICIPATES IN Leigh disease pathway; primary hyperoxaluria type 2 pathway; pyruvate decarboxylase deficiency pathway; ASSOCIATED WITH Right Ventricular Hypertrophy (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 15 58180098 58224483 + 22301074;30032202 116884333 MODEL JAAIVD010000010;XM_032885468 XP_032741359 NAD-dependent malic enzyme, mitochondrial protein-coding 625872353 Nanos1 nanos C2HC-type zinc finger 1 ENCODES a protein that exhibits enzyme activator activity (ortholog); INVOLVED IN cell migration (ortholog); cerebellar neuron development (ortholog); epithelial cell migration (ortholog); ASSOCIATED WITH malignant mesothelioma (ortholog); spermatogenic failure 12 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); perinuclear region of cytoplasm (ortholog) 2 55393305 55397252 - 30032202 116891307 MODEL JAAIVD010000001;XM_032892218 XP_032748109 nanos homolog 1 protein-coding 625872358 LOC116889911 olfactory receptor 6C2-like 1 160370576 160371522 - 116889911 MODEL JAAIVD010000025 pseudo 625872359 C2H19orf48 chromosome 2 C19orf48 homolog 2 155281389 155283627 - 116892220 MODEL JAAIVD010000001;XM_032893784 XP_032749675 uncharacterized protein C19orf48 homolog protein-coding 625872365 Smim1 small integral membrane protein 1 (Vel blood group) ENCODES a protein that exhibits protein homodimerization activity (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) 1 6692079 6694735 + 116886094 MODEL JAAIVD010000025;XM_032887423;XM_032887432;XM_032887439;XM_032887447 XP_032743314;XP_032743323;XP_032743330;XP_032743338 small integral membrane protein 1 protein-coding 625872383 Alg2 ALG2 alpha-1,3/1,6-mannosyltransferase ENCODES a protein that exhibits alpha-1,3-mannosyltransferase activity (ortholog); GDP-Man:Man(1)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase activity (ortholog); GDP-Man:Man(2)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); glycoprotein biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation Ii (ortholog); congenital disorder of glycosylation type II (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog) 1 100558845 100563403 - 30032202 116901991 MODEL JAAIVD010000025;XM_032904248 XP_032760139 alpha-1,3/1,6-mannosyltransferase ALG2 protein-coding 625872389 Wdr35 WD repeat domain 35 ENCODES a protein that exhibits protein carrier activity (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cellular response to leukemia inhibitory factor (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); connective tissue disease (ortholog); cranioectodermal dysplasia (ortholog); FOUND IN axoneme (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 7 29218333 29269757 + 22301074;30032202 116904864 MODEL JAAIVD010000026;XM_032907454;XM_032907455 XP_032763345;XP_032763346 WD repeat-containing protein 35 protein-coding 625872422 LOC116900302 olfactory receptor 141 5 63833449 63834384 - 22301074;30032202 116900302 MODEL JAAIVD010000023;XM_032902058 XP_032757949 protein-coding 625872425 Abca2 ATP binding cassette subfamily A member 2 ENCODES a protein that exhibits ATP binding (ortholog); ceramide floppase activity (ortholog); endopeptidase regulator activity (ortholog); INVOLVED IN central nervous system myelin formation (ortholog); ceramide translocation (ortholog); cholesterol homeostasis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); INTELLECTUAL DEVELOPMENTAL DISORDER WITH POOR GROWTH AND WITH OR WITHOUT SEIZURES OR ATAXIA (ortholog); sensory ataxic neuropathy, dysarthria, and ophthalmoparesis (ortholog); FOUND IN cytoplasmic vesicle (ortholog); endosome (ortholog); endosome membrane (ortholog) 5 11734070 11753850 - 22301074;30032202 116901301 MODEL JAAIVD010000023;XM_032903098 XP_032758989 ATP-binding cassette sub-family A member 2 protein-coding 625872478 Cacna1h calcium voltage-gated channel subunit alpha1 H ENCODES a protein that exhibits low voltage-gated calcium channel activity (ortholog); scaffold protein binding (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN aldosterone biosynthetic process (ortholog); calcium ion import (ortholog); calcium ion transport (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH arteriovenous malformations of the brain (ortholog); autistic disorder (ortholog); beta thalassemia (ortholog); FOUND IN caveola (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) 9 2638294 2696463 - 22301074;30032202 116908574 MODEL JAAIVD010000002;XM_032911785;XM_032911786 XP_032767676;XP_032767677 voltage-dependent T-type calcium channel subunit alpha-1H protein-coding 625872522 Zswim1 zinc finger SWIM-type containing 1 FOUND IN nucleus (ortholog) 5 153132586 153137040 - 22301074 116902347 MODEL JAAIVD010000023;XM_032904830 XP_032760721 zinc finger SWIM domain-containing protein 1 protein-coding 625872528 LOC116884081 small nucleolar RNA SNORA17 14 4386686 4386808 - 116884081 MODEL JAAIVD010000009 pseudo 625872529 LOC116886543 uncharacterized LOC116886543 17 13659273 13665704 + 116886543 MODEL JAAIVD010000011;XR_004386111 ncrna 625872533 Clasp1 cytoplasmic linker associated protein 1 ENCODES a protein that exhibits dystroglycan binding (ortholog); kinetochore binding (ortholog); microtubule binding (ortholog); INVOLVED IN astral microtubule organization (ortholog); basement membrane organization (ortholog); cell division (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2A (ortholog); Cough (ortholog); FOUND IN basal cortex (ortholog); cell cortex (ortholog); centrosomal corona (ortholog) 10 10972310 11193945 + 30032202 116911086 MODEL JAAIVD010000005;XM_032914877;XM_032914878;XM_032914879;XM_032914880;XM_032914881;XM_032914882;XM_032914884;XM_032914885;XM_032914886;XM_032914887;XM_032914888;XM_032914889;XM_032914890;XM_032914891;XM_032914892;XM_032914893;XM_032914894;XM_032914895;XM_032914896;XM_032914897;XM_032914898;XM_032914900;XM_032914901;XM_032914902;XM_032914903;XM_032914904;XM_032914905;XM_032914906;XM_032914907;XM_032914908;XM_032914909;XM_032914911 XP_032770768;XP_032770769;XP_032770770;XP_032770771;XP_032770772;XP_032770773;XP_032770775;XP_032770776;XP_032770777;XP_032770778;XP_032770779;XP_032770780;XP_032770781;XP_032770782;XP_032770783;XP_032770784;XP_032770785;XP_032770786;XP_032770787;XP_032770788;XP_032770789;XP_032770791;XP_032770792;XP_032770793;XP_032770794;XP_032770795;XP_032770796;XP_032770797;XP_032770798;XP_032770799;XP_032770800;XP_032770802 CLIP-associating protein 1 protein-coding 625872612 Tdg thymine DNA glycosylase ENCODES a protein that exhibits ATP binding (ortholog); chloride ion binding (ortholog); DNA binding (ortholog); INVOLVED IN base-excision repair (ortholog); epigenetic regulation of gene expression (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Experimental Mammary Neoplasms (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); PML body (ortholog) 1 165785910 165805563 - 22301074;30032202 116907641 MODEL JAAIVD010000025;XM_032910709;XM_032910718 XP_032766600;XP_032766609 G/T mismatch-specific thymine DNA glycosylase protein-coding 625872631 LOC116890739 uncharacterized LOC116890739 2 2520768 2533513 - 116890739 MODEL JAAIVD010000001;XR_004386781 ncrna 625872636 LOC116887772 small nucleolar RNA SNORD83 18 7842121 7842199 + 116887772 MODEL JAAIVD010000013;XR_004386269 snorna 625872639 LOC116886524 thymosin beta-10-like 17 2723861 2724107 - 22301074;30032202 116886524 MODEL JAAIVD010000011;XM_032888036 XP_032743927 protein-coding 625872644 Rab18 RAB18, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTPase activity (ortholog); INVOLVED IN endoplasmic reticulum tubular network organization (ortholog); import into nucleus (ortholog); lipid droplet organization (ortholog); ASSOCIATED WITH genetic disease (ortholog); Warburg micro syndrome (ortholog); Warburg micro syndrome 3 (ortholog); FOUND IN cis-Golgi network membrane (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum tubular network (ortholog) 14 29077298 29109691 - 22301074 116883159 MODEL JAAIVD010000009;XM_032884183 XP_032740074 ras-related protein Rab-18 protein-coding 625872655 Cep55 centrosomal protein 55 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cranial skeletal system development (ortholog); establishment of protein localization (ortholog); midbody abscission (ortholog); ASSOCIATED WITH COVID-19 (ortholog); encephalopathy due to defective mitochondrial and peroxisomal fission 1 (ortholog); genetic disease (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); Flemming body (ortholog) 2 35688987 35704121 - 30032202 116891125 MODEL JAAIVD010000001;XM_032891846;XM_032891847;XM_032891848 XP_032747737;XP_032747738;XP_032747739 centrosomal protein of 55 kDa protein-coding 625872673 Whr1 winged helix repair factor 1 ENCODES a protein that exhibits double-stranded DNA binding (ortholog); double-stranded RNA binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN positive regulation of Ras protein signal transduction (ortholog); positive regulation of single strand break repair (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleus (ortholog) 18 7420031 7429820 - 30032202 116886839 MODEL JAAIVD010000013;XM_032888287 XP_032744178 Stk19 serine/threonine kinase 19;serine/threonine-protein kinase 19 protein-coding 625872684 Zbtb11 zinc finger and BTB domain containing 11 ASSOCIATED WITH autosomal recessive intellectual developmental disorder 69 (ortholog); gastrointestinal stromal tumor (ortholog); FOUND IN nucleoplasm (ortholog) 4 40103612 40139462 + 22301074;30032202 116898899 MODEL JAAIVD010000003;XM_032900297 XP_032756188 zinc finger and BTB domain-containing protein 11 protein-coding 625872699 LOC116883242 ADP/ATP translocase 4-like 14 62580493 62584731 + 116883242 MODEL JAAIVD010000009 pseudo 625872700 LOC116911252 small nuclear ribonucleoprotein G-like 10 59173974 59174323 - 22301074;30032202 116911252 MODEL JAAIVD010000005;XM_032915152 XP_032771043 protein-coding 625872705 LOC116912944 U7 small nuclear RNA 11 76714580 76714633 - 116912944 MODEL JAAIVD010000006 pseudo 625872706 Lin52 lin-52 DREAM MuvB core complex component 7 98563531 98657027 + 22301074;30032202 116905273 MODEL JAAIVD010000026;XM_032908125;XM_032908126;XM_032908127;XM_032908129;XM_032908130;XM_032908131;XM_032908132 XP_032764016;XP_032764017;XP_032764018;XP_032764020;XP_032764021;XP_032764022;XP_032764023 protein lin-52 homolog protein-coding 625872741 LOC116888599 olfactory receptor 13C9 FOUND IN nucleoplasm (ortholog) 1 96719743 96720693 - 22301074 116888599 MODEL JAAIVD010000025;XM_032889899 XP_032745790 protein-coding 625872744 LOC116890525 small nucleolar RNA SNORA17 1 267557659 267557790 - 116890525 MODEL JAAIVD010000025;XR_004386707 snorna 625872747 Nme2 NME/NM23 nucleoside diphosphate kinase 2 ENCODES a protein that exhibits coenzyme A binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cellular response to fatty acid (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN adefovir pharmacokinetics pathway; de novo pyrimidine biosynthetic pathway; Glut1 deficiency syndrome pathway; ASSOCIATED WITH arteriosclerosis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cell periphery (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 51573624 51579064 + 22301074;30032202 116908822 MODEL JAAIVD010000002;XM_032912240 XP_032768131 nucleoside diphosphate kinase B protein-coding 625872756 Slc25a42 solute carrier family 25 member 42 ENCODES a protein that exhibits ADP phosphatase activity (ortholog); ADP transmembrane transporter activity (ortholog); AMP transmembrane transporter activity (ortholog); INVOLVED IN ADP transport (ortholog); AMP transport (ortholog); ATP transport (ortholog); ASSOCIATED WITH genetic disease (ortholog); mitochondrial myopathy (ortholog); Recurrent Metabolic Crises with Variable Encephalomyopathic Features and Neurologic Regression (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 13 12451060 12474224 - 22301074 116914598 MODEL JAAIVD010000008;XM_032918959 XP_032774850 mitochondrial coenzyme A transporter SLC25A42 protein-coding 625872768 LOC116889479 U1 spliceosomal RNA X 12472300 12472461 + 116889479 MODEL JAAIVD010000014;XR_004386430 snrna 625872771 Sanbr SANT and BTB domain regulator of CSR ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN isotype switching (ortholog) 11 93333621 93382751 + 116912915 MODEL JAAIVD010000006;XM_032917176 XP_032773067 Kiaa1841 uncharacterized protein KIAA1841 homolog protein-coding 625872797 Hrob homologous recombination factor with OB-fold ENCODES a protein that exhibits single-stranded DNA binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA synthesis involved in DNA repair (ortholog); female gamete generation (ortholog); ASSOCIATED WITH Ovarian Dysgenesis 11 (ortholog); primary ovarian insufficiency (ortholog); FOUND IN site of DNA damage (ortholog) 9 61546016 61562098 + 22301074;30032202 116909170 MODEL JAAIVD010000002;XM_032912661 XP_032768552 uncharacterized protein C17orf53 homolog protein-coding 625872811 Ica1l islet cell autoantigen 1 like INVOLVED IN spermatid development (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); FOUND IN acrosomal vesicle (ortholog) 5 6320202 6367818 + 22301074;30032202 116901197 MODEL JAAIVD010000023;XM_032902893;XM_032902894;XM_032902895;XM_032902896;XM_032902897;XM_032902898;XM_032902899;XM_032902900;XM_032902901;XM_032902902;XM_032902903 XP_032758784;XP_032758785;XP_032758786;XP_032758787;XP_032758788;XP_032758789;XP_032758790;XP_032758791;XP_032758792;XP_032758793;XP_032758794 islet cell autoantigen 1-like protein protein-coding 625872848 LOC116896379 glutathione S-transferase Yb-3 3 50327821 50333276 + 22301074;30032202 116896379 MODEL JAAIVD010000012;XM_032897502 XP_032753393 protein-coding 625872860 Mrpl20 mitochondrial ribosomal protein L20 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrial ribosome (ortholog); mitochondrion (ortholog) 1 4824778 4829278 - 22301074;30032202 116891775 MODEL JAAIVD010000025;XM_032893120 XP_032749011 39S ribosomal protein L20, mitochondrial protein-coding 625872868 LOC116896015 annexin-2 receptor-like 3 176954221 176954730 + 116896015 MODEL JAAIVD010000012 pseudo 625872869 Cnn1 calponin 1 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN negative regulation of vascular associated smooth muscle cell proliferation (ortholog); FOUND IN cytoskeleton (ortholog) 8 18349443 18359215 + 22301074 116906815 MODEL JAAIVD010000027;XM_032909694 XP_032765585 calponin-1 protein-coding 625872880 LOC116892349 uncharacterized LOC116892349 2 165966765 165970075 + 116892349 MODEL JAAIVD010000001;XR_004386945 ncrna 625872885 LOC116903658 purine nucleoside phosphorylase-like 6 1010334 1163788 + 116903658 MODEL JAAIVD010000024 pseudo 625872886 Ube2e2 ubiquitin conjugating enzyme E2 E2 ENCODES a protein that exhibits ISG15 transferase activity (ortholog); ubiquitin conjugating enzyme activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN DNA damage response (ortholog); ISG15-protein conjugation (ortholog); positive regulation of G1/S transition of mitotic cell cycle (ortholog); ASSOCIATED WITH hepatocellular adenoma (ortholog); hepatocellular carcinoma (ortholog); type 2 diabetes mellitus (ortholog) 12 89149205 89419365 + 30032202 116913543 MODEL JAAIVD010000007;XM_032917744 XP_032773635 ubiquitin-conjugating enzyme E2 E2 protein-coding 625872894 LOC116884834 protocadherin beta-2-like 15 921836 924627 + 22301074 116884834 MODEL JAAIVD010000010;XM_032886072 XP_032741963 protein-coding 625872899 Slc6a9 solute carrier family 6 member 9 ENCODES a protein that exhibits glycine transmembrane transporter activity (ortholog); glycine:sodium symporter activity (ortholog); INVOLVED IN glycine import across plasma membrane (ortholog); glycine secretion, neurotransmission (ortholog); glycine transport (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); genetic disease (ortholog); glycine encephalopathy (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) 1 39152247 39172357 - 22301074;30032202 116898065 MODEL JAAIVD010000025;XM_032899463 XP_032755354 sodium- and chloride-dependent glycine transporter 1 protein-coding 625872915 Odf4 outer dense fiber of sperm tails 4 FOUND IN motile cilium (ortholog); outer dense fiber (ortholog) 9 48520447 48526145 - 30032202 116909699 MODEL JAAIVD010000002;XM_032913364;XM_032913365 XP_032769255;XP_032769256 outer dense fiber protein 4 protein-coding 625872929 Myh10 myosin heavy chain 10 ENCODES a protein that exhibits actin filament binding (ortholog); ADP binding (ortholog); ATP binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); actin filament bundle distribution (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); congenital fibrosis of the extraocular muscles (ortholog); focal segmental glomerulosclerosis (ortholog); FOUND IN actomyosin (ortholog); axon (ortholog); brush border (ortholog) 9 48288229 48415067 + 22301074 116909538 MODEL JAAIVD010000002;XM_032913155 XP_032769046 myosin-10 protein-coding 625872975 Tm9sf4 transmembrane 9 superfamily member 4 ENCODES a protein that exhibits cargo receptor activity (ortholog); INVOLVED IN cell adhesion (ortholog); Golgi to plasma membrane transport (ortholog); phagocytosis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN early endosome (ortholog); Golgi apparatus (ortholog) 5 132477912 132525601 + 22301074;30032202 116902137 MODEL JAAIVD010000023;XM_032904464;XM_032904465 XP_032760355;XP_032760356 protein-coding 625873001 LOC116908190 peptidyl-prolyl cis-trans isomerase A-like 8 54997329 54997734 - 116908190 MODEL JAAIVD010000027 pseudo 625873002 LOC116900092 beta-lactoglobulin-1A/1C-like 5 11460589 11463848 + 30032202 116900092 MODEL JAAIVD010000023;XM_032901871 XP_032757762 protein-coding 625873012 Zbtb24 zinc finger and BTB domain containing 24 INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH genetic disease (ortholog); immunodeficiency-centromeric instability-facial anomalies syndrome 2 (ortholog); Kabuki Syndrome 1 (ortholog) 18 41142495 41156441 + 22301074;30032202 116887182 MODEL JAAIVD010000013;XM_032888737 XP_032744628 zinc finger and BTB domain-containing protein 24 protein-coding 625873023 Kif3b kinesin family member 3B ENCODES a protein that exhibits intraciliary transport particle B binding (ortholog); microtubule binding (ortholog); small GTPase binding (ortholog); INVOLVED IN anterograde dendritic transport of neurotransmitter receptor complex (ortholog); cilium assembly (ortholog); intraciliary transport (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); oligospermia (ortholog); optic atrophy (ortholog); FOUND IN axon (ortholog); centrosome (ortholog); cilium (ortholog) 5 132606621 132646196 + 22301074;30032202 116902142 MODEL JAAIVD010000023;XM_032904471 XP_032760362 kinesin-like protein KIF3B protein-coding 625873036 Arsk arylsulfatase family member K ENCODES a protein that exhibits arylsulfatase activity (ortholog); glucuronate-2-sulfatase activity (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); mucopolysaccharidosis X (ortholog); FOUND IN extracellular region (ortholog); lysosome (ortholog) 3 221071571 221132545 + 116897356 MODEL JAAIVD010000012;XM_032899114 XP_032755005 arylsulfatase K protein-coding 625873048 Lgals3bp galectin 3 binding protein ASSOCIATED WITH liver cirrhosis (ortholog); FOUND IN extracellular region (ortholog) 9 65666743 65674131 + 22301074;30032202 116909794 MODEL JAAIVD010000002;XM_032913490 XP_032769381 galectin-3-binding protein protein-coding 625873057 Trnae-uuc transfer RNA glutamic acid (anticodon UUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 13 31413421 31413492 + 116915200 MODEL JAAIVD010000008 trna 625873058 Deup1 deuterosome assembly protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN de novo centriole assembly involved in multi-ciliated epithelial cell differentiation (ortholog); multi-ciliated epithelial cell differentiation (ortholog); ASSOCIATED WITH glioblastoma (ortholog); lung non-small cell carcinoma (ortholog); polycystic kidney disease (ortholog); FOUND IN deuterosome (ortholog) 8 11328976 11373240 - 30032202 116906966 MODEL JAAIVD010000027;XM_032909886;XM_032909887;XM_032909888;XM_032909889;XM_032909890 XP_032765777;XP_032765778;XP_032765779;XP_032765780;XP_032765781 protein-coding 625873080 Sel1l3 SEL1L family member 3 11 52923958 53030414 + 22301074 116911926 MODEL JAAIVD010000006;XM_032915812 XP_032771703 protein sel-1 homolog 3 protein-coding 625873108 LOC116897544 small nucleolar RNA SNORA17 3 71681366 71681497 - 116897544 MODEL JAAIVD010000012;XR_004387558 snorna 625873111 Hoxb3 homeobox B3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN angiogenesis (ortholog); anterior/posterior pattern specification (ortholog); cartilage development (ortholog); ASSOCIATED WITH Diaphragmatic Hernia (ortholog); hereditary breast ovarian cancer syndrome (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN nucleoplasm (ortholog) 9 58035914 58042746 - 22301074;30032202 116908483 MODEL JAAIVD010000002;XM_032911637;XM_032911638 XP_032767528;XP_032767529 homeobox protein Hox-B3 protein-coding 625873120 Npffr1 neuropeptide FF receptor 1 ENCODES a protein that exhibits neuropeptide receptor activity (ortholog); INVOLVED IN neuropeptide signaling pathway (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); cilium (ortholog); plasma membrane (ortholog) 18 27420667 27451376 + 22301074;30032202 116887345 MODEL JAAIVD010000013;XM_032888939 XP_032744830 protein-coding 625873127 Apc APC regulator of WNT signaling pathway ENCODES a protein that exhibits beta-catenin binding (ortholog); cadherin binding (ortholog); dynein complex binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); axis specification (ortholog); axonogenesis (ortholog); PARTICIPATES IN altered Wnt signaling, canonical pathway; colorectal cancer pathway; endometrial cancer pathway; ASSOCIATED WITH Abdominal Fibromatosis (ortholog); Aberrant Crypt Foci (ortholog); acinar cell carcinoma (ortholog); FOUND IN adherens junction (ortholog); axon (ortholog); axonal growth cone (ortholog) 15 10036601 10128388 - 22301074;30032202 116884282 MODEL JAAIVD010000010;XM_032885365;XM_032885366;XM_032885367;XM_032885368;XM_032885369;XM_032885370;XM_032885371;XM_032885372;XM_032885373;XM_032885374;XM_032885375;XM_032885377;XM_032885378;XM_032885379 XP_032741256;XP_032741257;XP_032741258;XP_032741259;XP_032741260;XP_032741261;XP_032741262;XP_032741263;XP_032741264;XP_032741265;XP_032741266;XP_032741268;XP_032741269;XP_032741270 adenomatous polyposis coli protein protein-coding 625873178 LOC116900125 olfactory receptor 50-like 5 14393240 14394171 + 22301074;30032202 116900125 MODEL JAAIVD010000023;XM_032901899 XP_032757790 protein-coding 625873181 Ghrhr growth hormone releasing hormone receptor ENCODES a protein that exhibits growth factor binding (ortholog); growth hormone-releasing hormone receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN activation of adenylate cyclase activity (ortholog); adenohypophysis development (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH disorder of sexual development (ortholog); Experimental Diabetes Mellitus (ortholog); genetic disease (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); membrane (ortholog) 6 85684312 85697608 - 22301074;30032202 116902822 MODEL JAAIVD010000024;XM_032905151;XM_032905152 XP_032761042;XP_032761043 growth hormone-releasing hormone receptor protein-coding 625873202 LOC116884910 flavin reductase (NADPH)-like 15 7674062 7679162 - 116884910 MODEL JAAIVD010000010;XM_032886133 XP_032742024 protein-coding 625873207 LOC116898429 eukaryotic translation initiation factor 4 gamma 1-like 4 91578693 91589269 + 116898429 MODEL JAAIVD010000003 pseudo 625873208 Ttk TTK protein kinase ENCODES a protein that exhibits identical protein binding (ortholog); protein serine/threonine kinase activity (ortholog); protein serine/threonine/tyrosine kinase activity (ortholog); INVOLVED IN female meiosis chromosome segregation (ortholog); meiotic spindle assembly checkpoint signaling (ortholog); mitotic spindle assembly checkpoint signaling (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); polycystic ovary syndrome (ortholog); FOUND IN cytoplasm (ortholog); kinetochore (ortholog) 8 77965343 78002941 + 22301074;30032202 116907793 MODEL JAAIVD010000027;XM_032910935 XP_032766826 dual specificity protein kinase TTK protein-coding 625873235 LOC116901711 reticulocalbin-1-like 5 83320813 83326150 - 116901711 MODEL JAAIVD010000023 pseudo 625873236 LOC116894527 vomeronasal type-2 receptor 116-like 2 175499056 175524922 + 22301074;30032202 116894527 MODEL JAAIVD010000001;XM_032896227;XM_032896228;XM_032896229 XP_032752118;XP_032752119;XP_032752120 protein-coding 625873251 Fuom fucose mutarotase ENCODES a protein that exhibits fucose binding (ortholog); L-fucose mutarotase activity (ortholog); racemase and epimerase activity, acting on carbohydrates and derivatives (ortholog); INVOLVED IN female mating behavior (ortholog); fucose metabolic process (ortholog); GDP-L-fucose salvage (ortholog); FOUND IN cytosol (ortholog) 2 61766429 61769505 + 30032202 116893863 MODEL JAAIVD010000001;XM_032895583 XP_032751474 protein-coding 625873261 Josd1 Josephin domain containing 1 ENCODES a protein that exhibits deubiquitinase activity (ortholog); INVOLVED IN cell motility (ortholog); endocytosis (ortholog); membrane biogenesis (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) X 76500529 76502994 + 22301074;30032202 116888004 MODEL JAAIVD010000014;XM_032889425 XP_032745316 josephin-1 protein-coding 625873266 LOC116895790 histone H3.3A-like 3 58960427 58961113 + 116895790 MODEL JAAIVD010000012 pseudo 625873267 Serp1 stress associated endoplasmic reticulum protein 1 INVOLVED IN endoplasmic reticulum unfolded protein response (ortholog); glucose metabolic process (ortholog); muscle organ morphogenesis (ortholog); FOUND IN cytoplasmic microtubule (ortholog) 3 97034963 97038941 - 22301074;30032202 116896852 MODEL JAAIVD010000012;XM_032898362 XP_032754253 stress-associated endoplasmic reticulum protein 1 protein-coding 625873274 Stk33 serine/threonine kinase 33 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN manchette assembly (ortholog); negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); negative regulation of protein polyubiquitination (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); depressive disorder (ortholog); spermatogenic failure 93 (ortholog); FOUND IN manchette (ortholog) 2 92142990 92215460 + 22301074;30032202 116893943 MODEL JAAIVD010000001;XM_032895660 XP_032751551 serine/threonine-protein kinase 33 protein-coding 625873290 LOC116897824 myosin light polypeptide 6-like 4 9155729 9156102 - 116897824 MODEL JAAIVD010000003 pseudo 625873291 LOC116911860 U2 spliceosomal RNA 10 3682963 3683182 + 116911860 MODEL JAAIVD010000005 pseudo 625873292 LOC116889149 glycine receptor subunit alpha-4-like X 88515430 88532214 - 22301074;30032202 116889149 MODEL JAAIVD010000014;XM_032890317 XP_032746208 protein-coding 625873303 Gkap1 G kinase anchoring protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive regulation of insulin receptor signaling pathway (ortholog); receptor guanylyl cyclase signaling pathway (ortholog); FOUND IN Golgi apparatus (ortholog) 14 79854961 79891927 + 22301074;30032202 116883399 MODEL JAAIVD010000009;XM_032884526 XP_032740417 G kinase-anchoring protein 1 protein-coding 625873318 Ca13 carbonic anhydrase 13 3 157529653 157553703 - 22301074;30032202 116897082 MODEL JAAIVD010000012;XM_032898705 XP_032754596 protein-coding 625873329 Gpr152 G protein-coupled receptor 152 ENCODES a protein that exhibits identical protein binding (ortholog) 2 3498852 3500411 - 22301074;30032202 116893599 MODEL JAAIVD010000001;XM_032895301 XP_032751192 probable G-protein coupled receptor 152 protein-coding 625873332 Trim33 tripartite motif containing 33 ENCODES a protein that exhibits co-SMAD binding (ortholog); promoter-specific chromatin binding (ortholog); R-SMAD binding (ortholog); INVOLVED IN gene expression (ortholog); negative regulation of BMP signaling pathway (ortholog); protein ubiquitination (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH developmental dysplasia of the hip (ortholog); Developmental Dysplasia of the Hip 4 (ortholog); ovarian cancer (ortholog); FOUND IN nucleus (ortholog) 3 54679254 54755637 - 22301074 116896447 MODEL JAAIVD010000012;XM_032897601;XM_032897602 XP_032753492;XP_032753493 E3 ubiquitin-protein ligase TRIM33 protein-coding 625873356 Rergl RERG like ASSOCIATED WITH prostate cancer (ortholog) 6 10012842 10021885 + 22301074 116904528 MODEL JAAIVD010000024;XM_032907321 XP_032763212 ras-related and estrogen-regulated growth inhibitor-like protein protein-coding 625873365 LOC116913032 U4 spliceosomal RNA 11 73320042 73320126 + 116913032 MODEL JAAIVD010000006 pseudo 625873366 LOC116888415 40S ribosomal protein S9-like X 12985969 12986598 - 116888415 MODEL JAAIVD010000014 pseudo 625873367 Ccr2 C-C motif chemokine receptor 2 ENCODES a protein that exhibits C-C chemokine receptor activity (ortholog); CCR2 chemokine receptor binding (ortholog); chemokine (C-C motif) ligand 12 binding (ortholog); INVOLVED IN blood vessel remodeling (ortholog); cellular defense response (ortholog); cellular homeostasis (ortholog); ASSOCIATED WITH age related macular degeneration (ortholog); aggressive periodontitis (ortholog); allergic bronchopulmonary aspergillosis (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); external side of plasma membrane (ortholog) 8 115176474 115177595 + 22301074;30032202 116907709 MODEL JAAIVD010000027;XM_032910833 XP_032766724 C-C chemokine receptor type 2 protein-coding 625873370 LOC116900811 60S ribosomal protein L29-like 5 30522338 30523032 + 22301074;30032202 116900811 MODEL JAAIVD010000023;XM_032902524 XP_032758415 protein-coding 625873374 Cited4 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); response to estrogen (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 1 36330100 36331311 - 22301074;30032202 116887062 MODEL JAAIVD010000025;XM_032888560 XP_032744451 cbp/p300-interacting transactivator 4 protein-coding 625873379 LOC116895112 U2 spliceosomal RNA 2 172045178 172045355 - 116895112 MODEL JAAIVD010000001 pseudo 625873380 Xkrx XK related X-linked X 86480249 86492062 - 22301074 116888693 MODEL JAAIVD010000014;XM_032889983 XP_032745874 XK-related protein 2 protein-coding 625873387 LOC116894986 small nucleolar RNA SNORA19 2 55377827 55377958 + 116894986 MODEL JAAIVD010000001;XR_004387177 snorna 625873390 Poglut1 protein O-glucosyltransferase 1 ENCODES a protein that exhibits glucosyltransferase activity (ortholog); UDP-glucosyltransferase activity (ortholog); UDP-xylosyltransferase activity (ortholog); INVOLVED IN axial mesoderm development (ortholog); circulatory system development (ortholog); muscle tissue development (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2Z (ortholog); Dowling-Degos disease (ortholog); Dowling-Degos Disease 4 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) 4 23476440 23497827 - 30032202 116898845 MODEL JAAIVD010000003;XM_032900200 XP_032756091 protein-coding 625873405 Tnnc2 troponin C2, fast skeletal type ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN regulation of muscle contraction (ortholog); skeletal muscle contraction (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH congenital myopathy 15 (ortholog); FOUND IN troponin complex (ortholog) 5 153178318 153181219 + 22301074;30032202 116900766 MODEL JAAIVD010000023;XM_032902477;XM_032902478 XP_032758368;XP_032758369 troponin C, skeletal muscle protein-coding 625873418 LOC116883243 60S ribosomal protein L29-like 14 62761150 62761627 - 116883243 MODEL JAAIVD010000009 pseudo 625873419 R3hcc1 R3H domain and coiled-coil containing 1 12 54625259 54632797 + 22301074 116913173 MODEL JAAIVD010000007;XM_032917375 XP_032773266 R3H and coiled-coil domain-containing protein 1 protein-coding 625873430 LOC116883621 proteasome activator complex subunit 1-like 14 34612738 34613468 + 116883621 MODEL JAAIVD010000009;XR_004385774 pseudo 625873433 Gtpbp4 GTP binding protein 4 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); preribosome binding (ortholog); INVOLVED IN maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); negative regulation of cell migration (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH end stage renal disease (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleus (ortholog) 14 23152897 23172556 + 22301074;30032202 116883601 MODEL JAAIVD010000009;XM_032884783 XP_032740674 nucleolar GTP-binding protein 1 protein-coding 625873454 LOC116883354 histone H2B type 1-C/E/F/G/I-like 14 41630707 41642405 - 22301074;30032202 116883354 MODEL JAAIVD010000009;XM_032884433 XP_032740324 protein-coding 625873460 LOC116892232 zinc finger protein 175-like 2 155785867 155792511 - 30032202 116892232 MODEL JAAIVD010000001;XM_032893803 XP_032749694 protein-coding 625873468 Syp synaptophysin ENCODES a protein that exhibits cholesterol binding (ortholog); identical protein binding (ortholog); protein carrier activity (ortholog); INVOLVED IN endocytosis (ortholog); modulation of chemical synaptic transmission (ortholog); protein homooligomerization (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); Alzheimer's disease (ortholog); cochlear disease (ortholog); FOUND IN basal part of cell (ortholog); excitatory synapse (ortholog); membrane (ortholog) X 14476414 14496989 - 22301074;30032202 116888361 MODEL JAAIVD010000014;XM_032889630 XP_032745521 protein-coding 625873479 LOC116890463 olfactory receptor 10AD1-like 1 271003936 271013294 - 22301074 116890463 MODEL JAAIVD010000025;XM_032891008 XP_032746899 protein-coding 625873484 Sars2 seryl-tRNA synthetase 2, mitochondrial ASSOCIATED WITH HUPRA Syndrome (ortholog); FOUND IN mitochondrion (ortholog) 2 167253514 167265693 - 22301074;30032202 116892379 MODEL JAAIVD010000001;XM_032894042 XP_032749933 serine--tRNA ligase, mitochondrial protein-coding 625873504 Trnas-gcu transfer RNA serine (anticodon GCU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 2615751 2615832 + 116895125 MODEL JAAIVD010000001 trna 625873505 LOC116904348 SHC-transforming protein 1-like 6 72667832 72708235 - 22301074;30032202 116904348 MODEL JAAIVD010000024;XM_032907242 XP_032763133 protein-coding 625873509 Rexo4 REX4 homolog, 3'-5' exonuclease ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); double-stranded DNA binding (ortholog); endonuclease activity (ortholog); INVOLVED IN DNA catabolic process (ortholog); DNA repair (ortholog); ASSOCIATED WITH Habitual Abortions (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 5 9692818 9703131 + 22301074;30032202 116901250 MODEL JAAIVD010000023;XM_032903003 XP_032758894 RNA exonuclease 4 protein-coding 625873521 LOC116905914 uncharacterized LOC116905914 7 128555306 128560003 - 116905914 MODEL JAAIVD010000026;XR_004388577 ncrna 625873525 LOC116889439 U6 spliceosomal RNA X 88602236 88602338 - 116889439 MODEL JAAIVD010000014;XR_004386401 snrna 625873528 LOC116906922 uncharacterized LOC116906922 1 157548953 157552998 - 116906922 MODEL JAAIVD010000025;XR_004388781 ncrna 625873532 Usp53 ubiquitin specific peptidase 53 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); K63-linked deubiquitinase activity (ortholog); INVOLVED IN action potential (ortholog); apoptotic process (ortholog); neuron apoptotic process (ortholog); ASSOCIATED WITH cholestasis (ortholog); genetic disease (ortholog); primary ovarian insufficiency (ortholog); FOUND IN bicellular tight junction (ortholog); cell-cell junction (ortholog) 3 36836197 36895878 + 22301074;30032202 116896293 MODEL JAAIVD010000012;XM_032897376 XP_032753267 inactive ubiquitin carboxyl-terminal hydrolase 53 protein-coding 625873552 LOC116900954 60S ribosomal protein L19-like 5 96139588 96153956 + 116900954 MODEL JAAIVD010000023 pseudo 625873553 LOC116884649 60S ribosomal protein L9-like 15 40915056 40920637 + 116884649 MODEL JAAIVD010000010 pseudo 625873554 Vma21 vacuolar ATPase assembly factor VMA21 INVOLVED IN lysosomal lumen acidification (ortholog); vacuolar proton-transporting V-type ATPase complex assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); Vacuolar Myopathy (ortholog); X-linked myopathy with excessive autophagy (ortholog); FOUND IN lysosome (ortholog) 13 402287 408984 - 22301074;30032202 116915026 MODEL JAAIVD010000008;XM_032919435 XP_032775326 vacuolar ATPase assembly integral membrane protein VMA21 protein-coding 625873561 Inafm1 InaF motif containing 1 2 172786869 172787613 + 116892603 MODEL JAAIVD010000001;XM_032894397 XP_032750288 putative transmembrane protein INAFM1 protein-coding 625873566 LOC116905373 interferon alpha-inducible protein 27, mitochondrial-like 7 114730348 114736735 + 22301074;30032202 116905373 MODEL JAAIVD010000026;XM_032908311 XP_032764202 protein-coding 625873576 LOC116900450 olfactory receptor 4C15-like 5 71021695 71022663 - 22301074 116900450 MODEL JAAIVD010000023;XM_032902191 XP_032758082 protein-coding 625873579 LOC116884024 small EDRK-rich factor 2-like 14 12630540 12630712 + 116884024 MODEL JAAIVD010000009 pseudo 625873580 LOC116904353 cytochrome c oxidase subunit 6B1-like 6 76488870 76489293 - 116904353 MODEL JAAIVD010000024 pseudo 625873581 Trim3 tripartite motif containing 3 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN neural precursor cell proliferation (ortholog); positive regulation of toll-like receptor 3 signaling pathway (ortholog); protein K63-linked ubiquitination (ortholog); ASSOCIATED WITH autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); Golgi apparatus (ortholog) 2 104448114 104470797 - 22301074;30032202 116891820 MODEL JAAIVD010000001;XM_032893182 XP_032749073 tripartite motif-containing protein 3 protein-coding 625873597 Piezo2 piezo type mechanosensitive ion channel component 2 ENCODES a protein that exhibits mechanosensitive monoatomic cation channel activity (ortholog); mechanosensitive monoatomic ion channel activity (ortholog); monoatomic cation channel activity (ortholog); INVOLVED IN detection of mechanical stimulus involved in sensory perception (ortholog); detection of renal blood flow (ortholog); monoatomic cation transport (ortholog); ASSOCIATED WITH cerebral palsy (ortholog); distal arthrogryposis (ortholog); distal arthrogryposis type 3 (ortholog); FOUND IN cuticular plate (ortholog); neuronal cell body membrane (ortholog); stereocilium (ortholog) 15 68905324 69272499 - 30032202 116884327 MODEL JAAIVD010000010;XM_032885461;XM_032885462;XM_032885463 XP_032741352;XP_032741353;XP_032741354 piezo-type mechanosensitive ion channel component 2 protein-coding 625873659 LOC116912253 glyceraldehyde-3-phosphate dehydrogenase-like 11 24654134 24655176 - 116912253 MODEL JAAIVD010000006 pseudo 625873660 Mafb MAF bZIP transcription factor B ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN abducens nerve formation (ortholog); brain segmentation (ortholog); cornified envelope assembly (ortholog); ASSOCIATED WITH BROWN SYNDROME (ortholog); cleft lip (ortholog); COVID-19 (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) 5 139652425 139655783 - 30032202 116902245 MODEL JAAIVD010000023;XM_032904663 XP_032760554 transcription factor MafB protein-coding 625873665 LOC116887149 olfactory receptor 2B6-like 18 10917520 10918629 - 22301074 116887149 MODEL JAAIVD010000013;XM_032888696 XP_032744587 protein-coding 625873669 Slc26a10p Solute carrier family 26 member 10 1 205608464 205616623 - 22301074;30032202 116909868 MODEL JAAIVD010000025;XM_032913602 XP_032769493 Slc26a10 protein-coding 625873691 LOC116901260 histone acetyltransferase KAT2B-like 1 121461630 121462902 + 116901260 MODEL JAAIVD010000025 pseudo 625873692 LOC116892760 formyl peptide receptor-related sequence 4 ENCODES a protein that exhibits complement receptor activity (inferred); G protein-coupled receptor activity (inferred); N-formyl peptide receptor activity (inferred); INVOLVED IN complement receptor mediated signaling pathway (inferred); G protein-coupled receptor signaling pathway (inferred); inflammatory response (inferred); FOUND IN membrane (inferred); plasma membrane (inferred) 2 182409008 182409979 - 28652375;30032202 116892760 A0A220QSC3 MODEL JAAIVD010000001;MF175623;XM_032894638 ASK09533;XP_032750529 Fpr-rs4 protein-coding 625873695 LOC116891837 uncharacterized LOC116891837 1 4866464 4867548 - 116891837 MODEL JAAIVD010000025;XR_004386863 ncrna 625873699 LOC116887382 olfactory receptor 2B11-like 18 11122582 11123510 + 116887382 MODEL JAAIVD010000013 pseudo 625873700 Il23a interleukin 23 subunit alpha ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-23 receptor binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); cell surface receptor signaling pathway via STAT (ortholog); defense response to Gram-negative bacterium (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; ASSOCIATED WITH Amebic Liver Abscess (ortholog); Animal Toxoplasmosis (ortholog); asthma (ortholog); FOUND IN extracellular region (ortholog); interleukin-23 complex (ortholog); plasma membrane (ortholog) 1 155765926 155768132 - 22301074;30032202 116905971 MODEL JAAIVD010000025;XM_032908982 XP_032764873 interleukin-23 subunit alpha protein-coding 625873708 LOC116900426 olfactory receptor 4C15-like 5 70577027 70577962 + 22301074 116900426 MODEL JAAIVD010000023;XM_032902168 XP_032758059 protein-coding 625873711 Mrpl36 mitochondrial ribosomal protein L36 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 11 75671632 75672090 - 22301074;30032202 116912032 MODEL JAAIVD010000006;XM_032915916 XP_032771807 39S ribosomal protein L36, mitochondrial protein-coding 625873714 Dlgap4 DLG associated protein 4 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN modification of postsynaptic structure (ortholog); regulation of synapse maturation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN cholinergic synapse (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) 5 135961509 136107807 + 22301074;30032202 116902207 MODEL JAAIVD010000023;XM_032904598;XM_032904599;XM_032904600;XM_032904601;XM_032904602;XM_032904603;XM_032904604 XP_032760489;XP_032760490;XP_032760491;XP_032760492;XP_032760493;XP_032760494;XP_032760495 disks large-associated protein 4 protein-coding 625873751 Trnae-cuc transfer RNA glutamic acid (anticodon CUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92884273 92884344 + 116904844 MODEL JAAIVD010000024 trna 625873752 LOC116885555 general transcription factor II-I repeat domain-containing protein 2 16 19833073 19868051 - 30032202 116885555 MODEL JAAIVD010000004;XM_032886847 XP_032742738 protein-coding 625873772 Samm50 SAMM50 sorting and assembly machinery component INVOLVED IN cristae formation (ortholog); protein import into mitochondrial matrix (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; ASSOCIATED WITH metabolic dysfunction-associated steatotic liver disease (ortholog); FOUND IN membrane (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 1 253579225 253603989 + 22301074;30032202 116914518 MODEL JAAIVD010000025;XM_032918852 XP_032774743 sorting and assembly machinery component 50 homolog protein-coding 625873791 Herc6 HECT and RLD domain containing E3 ubiquitin protein ligase family member 6 INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); response to bacterium (ortholog); ASSOCIATED WITH Human Influenza (ortholog); FOUND IN cytosol (ortholog) 6 83428035 83482939 + 30032202 116903733 MODEL JAAIVD010000024;XM_032906418 XP_032762309 probable E3 ubiquitin-protein ligase HERC6 protein-coding 625873819 LOC116893463 short coiled-coil protein-like 2 179695680 179710040 + 30032202 116893463 MODEL JAAIVD010000001;XM_032895223 XP_032751114 protein-coding 625873825 Zc3h7b zinc finger CCCH-type containing 7B ENCODES a protein that exhibits miRNA binding (ortholog); INVOLVED IN miRNA processing (ortholog); post-transcriptional regulation of gene expression (ortholog) 1 251487874 251535583 + 22301074;30032202 116914046 MODEL JAAIVD010000025;XM_032918329;XM_032918337;XM_032918344 XP_032774220;XP_032774228;XP_032774235 zinc finger CCCH domain-containing protein 7B protein-coding 625873858 LOC116899885 small nucleolar RNA SNORA17 4 67388662 67388789 - 116899885 MODEL JAAIVD010000003;XR_004387869 snorna 625873861 Hey1 hes related family bHLH transcription factor with YRPW motif 1 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN angiogenesis (ortholog); anterior/posterior axis specification (ortholog); aortic valve morphogenesis (ortholog); PARTICIPATES IN altered Notch signaling pathway; altered Notch signaling pathway involving promoters; Notch signaling pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); atherosclerosis (ortholog); autism spectrum disorder (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 3 142817894 142821577 - 22301074;30032202 116897025 MODEL JAAIVD010000012;XM_032898638 XP_032754529 hairy/enhancer-of-split related with YRPW motif protein 1 protein-coding 625873870 LOC116900961 ubiquitin-40S ribosomal protein S27a-like 5 98950436 98950960 + 116900961 MODEL JAAIVD010000023 pseudo 625873871 LOC116884880 40S ribosomal protein S26-like 15 22811457 22811834 + 116884880 MODEL JAAIVD010000010 pseudo 625873872 LOC116897560 small nucleolar RNA SNORA17 3 134979832 134979963 + 116897560 MODEL JAAIVD010000012;XR_004387573 snorna 625873875 Slc22a17 solute carrier family 22 member 17 ENCODES a protein that exhibits transmembrane signaling receptor activity (ortholog); INVOLVED IN siderophore transport (ortholog); FOUND IN plasma membrane (ortholog) 12 70078116 70085135 + 22301074 116913531 MODEL JAAIVD010000007;XM_032917730;XM_032917731 XP_032773621;XP_032773622 protein-coding 625873891 LOC116909132 olfactory receptor 2B11 9 69327334 69329149 - 22301074 116909132 MODEL JAAIVD010000002;XM_032912617 XP_032768508 protein-coding 625873896 LOC116886107 uncharacterized LOC116886107 17 16132907 16139904 - 116886107 MODEL JAAIVD010000011;XR_004386089 ncrna 625873901 LOC116883831 zinc finger protein 844-like 14 76820807 76830153 + 22301074 116883831 MODEL JAAIVD010000009;XM_032885092 XP_032740983 protein-coding 625873908 LOC116914837 uncharacterized LOC116914837 13 17976595 17983995 + 116914837 MODEL JAAIVD010000008;XR_004389776;XR_004389777 ncrna 625873915 Fktn fukutin ENCODES a protein that exhibits phosphotransferase activity, for other substituted phosphate groups (ortholog); INVOLVED IN basement membrane organization (ortholog); brain development (ortholog); cerebellar cortex development (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2L (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2M (ortholog); cardiomyopathy (ortholog); FOUND IN cis-Golgi network (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) 1 97478841 97530576 + 30032202 116901814 MODEL JAAIVD010000025;XM_032903975;XM_032903983;XM_032903991;XM_032904000 XP_032759866;XP_032759874;XP_032759882;XP_032759891 protein-coding 625873938 Sucla2 succinate-CoA ligase ADP-forming subunit beta ENCODES a protein that exhibits acid-thiol ligase activity (ortholog); succinate-CoA ligase (ADP-forming) activity (ortholog); INVOLVED IN malate metabolic process (ortholog); succinate metabolic process (ortholog); succinyl-CoA metabolic process (ortholog); PARTICIPATES IN citric acid cycle pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); mitochondrial DNA depletion syndrome (ortholog); FOUND IN catalytic complex (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 12 50768006 50815281 - 22301074;30032202 116913358 MODEL JAAIVD010000007;XM_032917516 XP_032773407 succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial protein-coding 625873953 Mecom MDS1 and EVI1 complex locus ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN embryonic forelimb morphogenesis (ortholog); embryonic hindlimb morphogenesis (ortholog); forebrain development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); Colonic Neoplasms (ortholog); FOUND IN histone deacetylase complex (ortholog); nuclear speck (ortholog); nucleus (ortholog) 3 124187577 124735766 - 22301074;30032202 116896972 MODEL JAAIVD010000012;XM_032898551 XP_032754442 histone-lysine N-methyltransferase MECOM protein-coding 625873974 LOC116908940 40S ribosomal protein S17-like 9 50038117 50038586 + 22301074;30032202 116908940 MODEL JAAIVD010000002;XM_032912398 XP_032768289 protein-coding 625873979 LOC116908243 NACHT, LRR and PYD domains-containing protein 4A-like 8 84891697 84893357 - 116908243 MODEL JAAIVD010000027 pseudo 625873980 Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 ENCODES a protein that exhibits AMP-activated protein kinase activity (ortholog); ATP binding (ortholog); chromatin binding (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); cellular response to glucose starvation (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH Cardiac Fibrosis (ortholog); Cardiomegaly (ortholog); cardiomyopathy (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); cytoplasm (ortholog) 1 49503773 49573781 + 22301074;30032202 116899441 MODEL JAAIVD010000025;XM_032901203;XM_032901213;XM_032901222 XP_032757094;XP_032757104;XP_032757113 5'-AMP-activated protein kinase catalytic subunit alpha-2 protein-coding 625873999 LOC116913182 60S ribosomal protein L37-like 12 59938455 59938802 - 116913182 MODEL JAAIVD010000007 pseudo 625874000 LOC116897529 U1 spliceosomal RNA 3 156068867 156069029 - 116897529 MODEL JAAIVD010000012;XR_004387544 snrna 625874003 Qpctl glutaminyl-peptide cyclotransferase like ENCODES a protein that exhibits glutaminyl-peptide cyclotransferase activity (ortholog); zinc ion binding (ortholog); FOUND IN Golgi apparatus (ortholog) 2 171473271 171482785 + 22301074;30032202 116892548 MODEL JAAIVD010000001;XM_032894317;XM_032894318 XP_032750208;XP_032750209 glutaminyl-peptide cyclotransferase-like protein protein-coding 625874015 LOC116884673 40S ribosomal protein SA-like 15 38966626 38967518 + 116884673 MODEL JAAIVD010000010 pseudo 625874016 Tbx6 T-box transcription factor 6 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cell fate specification (ortholog); mesoderm formation (ortholog); negative regulation of neuron maturation (ortholog); ASSOCIATED WITH CAKUT (ortholog); genetic disease (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) 2 75111878 75116001 - 22301074;30032202 116891510 MODEL JAAIVD010000001;XM_032892644 XP_032748535 T-box transcription factor TBX6 protein-coding 625874028 LOC116912451 60S ribosomal protein L9-like 11 40893779 40894366 + 116912451 MODEL JAAIVD010000006 pseudo 625874029 LOC116895969 actin-related protein 3-like 3 151568343 151569441 + 116895969 MODEL JAAIVD010000012 pseudo 625874030 Vstm2b V-set and transmembrane domain containing 2B 2 158349141 158378691 - 116892242 MODEL JAAIVD010000001;XM_032893811 XP_032749702 V-set and transmembrane domain-containing protein 2B protein-coding 625874040 Il12rb1 interleukin 12 receptor subunit beta 1 ENCODES a protein that exhibits coreceptor activity (ortholog); cytokine binding (ortholog); interleukin-12 receptor activity (ortholog); INVOLVED IN cellular response to type II interferon (ortholog); interleukin-12-mediated signaling pathway (ortholog); interleukin-23-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-23 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH allergic rhinitis (ortholog); asthma (ortholog); brain ischemia (ortholog); FOUND IN external side of plasma membrane (ortholog); interleukin-12 receptor complex (ortholog); interleukin-23 receptor complex (ortholog) 13 13051491 13063841 + 22301074 116914616 MODEL JAAIVD010000008;XM_032918978 XP_032774869 interleukin-12 receptor subunit beta-1 protein-coding 625874059 Plxna4 plexin A4 ENCODES a protein that exhibits semaphorin receptor activity (ortholog); INVOLVED IN anterior commissure morphogenesis (ortholog); axon guidance (ortholog); branchiomotor neuron axon guidance (ortholog); FOUND IN cerebellar climbing fiber to Purkinje cell synapse (ortholog) 6 107053859 107494200 + 22301074;30032202 116903989 MODEL JAAIVD010000024;XM_032906796 XP_032762687 plexin-A4 protein-coding 625874095 LOC116915110 formin-like protein 5 13 10276420 10281365 + 116915110 MODEL JAAIVD010000008;XM_032919540;XR_004389797;XR_004389798 XP_032775431 protein-coding 625874106 Amn amnion associated transmembrane protein ENCODES a protein that exhibits cargo receptor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN cobalamin metabolic process (ortholog); cobalamin transport (ortholog); Golgi to plasma membrane protein transport (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Edema (ortholog); Extravasation of Diagnostic and Therapeutic Materials (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); brush border membrane (ortholog) 7 128849254 128855561 + 30032202 116905915 MODEL JAAIVD010000026;XM_032908901;XM_032908902 XP_032764792;XP_032764793 protein amnionless protein-coding 625874124 Psca prostate stem cell antigen ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); INVOLVED IN negative regulation of ERK1 and ERK2 cascade (ortholog); regulation of neurotransmitter receptor activity (ortholog); ASSOCIATED WITH duodenal ulcer (ortholog); Helicobacter Infections (ortholog); linitis plastica (ortholog); FOUND IN plasma membrane (ortholog) 1 247458334 247460290 + 116890129 MODEL JAAIVD010000025;XM_032890867 XP_032746758 protein-coding 625874131 Myh1 myosin heavy chain 1 INVOLVED IN muscle contraction (ortholog); sensory perception of sound (ortholog); FOUND IN A band (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); intercalated disc (ortholog) 9 46802537 46826361 + 22301074;8227143 116908642 MODEL JAAIVD010000002;X72591;XM_032911904;XM_032911905 CAA51189;XP_032767795;XP_032767796 myosin-1 protein-coding 625874179 Capza2 capping actin protein of muscle Z-line subunit alpha 2 ASSOCIATED WITH COVID-19 (ortholog); intellectual disability (ortholog); renal cell carcinoma (ortholog); FOUND IN brush border (ortholog); cortical cytoskeleton (ortholog); F-actin capping protein complex (ortholog) 6 121291079 121325682 - 22301074;30032202 116904059 MODEL JAAIVD010000024;XM_032906919 XP_032762810 F-actin-capping protein subunit alpha-2 protein-coding 625874193 Eef1akmt3 EEF1A lysine methyltransferase 3 ENCODES a protein that exhibits heat shock protein binding (ortholog); methyltransferase activity (ortholog); protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN peptidyl-lysine methylation (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); protein-containing complex (ortholog) 1 205462381 205471176 - 30032202 116890040 MODEL JAAIVD010000025;XM_032890811 XP_032746702 protein-coding 625874199 Dnah8 dynein axonemal heavy chain 8 ENCODES a protein that exhibits microtubule motor activity (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Cocaine-Related Disorders (ortholog); gestational diabetes (ortholog); FOUND IN axoneme (ortholog); sperm flagellum (ortholog); sperm midpiece (ortholog) 18 3000003 3245325 - 22301074;30032202 116887301 MODEL JAAIVD010000013;XM_032888883 XP_032744774 dynein heavy chain 8, axonemal protein-coding 625874294 LOC116913525 eukaryotic peptide chain release factor subunit 1-like 12 68812077 68813320 - 116913525 MODEL JAAIVD010000007 pseudo 625874295 LOC116909086 phospholipid hydroperoxide glutathione peroxidase-like 9 94334997 94335946 - 116909086 MODEL JAAIVD010000002 pseudo 625874296 LOC116911867 U4 spliceosomal RNA 10 22572490 22572623 + 116911867 MODEL JAAIVD010000005;XR_004389382 snrna 625874299 LOC116888025 heat shock transcription factor, X-linked member 3-like X 81702126 81704683 + 22301074 116888025 MODEL JAAIVD010000014;XM_032889435 XP_032745326 protein-coding 625874305 Ppp4r3b protein phosphatase 4 regulatory subunit 3B INVOLVED IN positive regulation of gluconeogenesis (ortholog); protein dephosphorylation (ortholog); regulation of double-strand break repair (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); cytoplasm (ortholog) 11 96789986 96838306 + 30032202 116912115 MODEL JAAIVD010000006;XM_032916019 XP_032771910 serine/threonine-protein phosphatase 4 regulatory subunit 3B protein-coding 625874325 LOC116913154 microfibrillar-associated protein 1-like 12 44815026 44858567 - 116913154 MODEL JAAIVD010000007 pseudo 625874326 Kif24 kinesin family member 24 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule motor activity (ortholog); INVOLVED IN cilium assembly (ortholog); microtubule depolymerization (ortholog); negative regulation of cilium assembly (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy 3 (ortholog); neuropathy (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); protein-containing complex (ortholog) 1 4117304 4156002 + 22301074;30032202 116891398 MODEL JAAIVD010000025;XM_032892426 XP_032748317 kinesin-like protein KIF24 protein-coding 625874342 Spib Spi-B transcription factor ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN immature B cell differentiation (ortholog); macrophage differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Mycoplasma pneumoniae pneumonia (ortholog); primary biliary cholangitis (ortholog) 2 155001457 155007268 + 22301074;30032202 116892205 MODEL JAAIVD010000001;XM_032893754;XM_032893755;XM_032893756;XM_032893757;XM_032893758 XP_032749645;XP_032749646;XP_032749647;XP_032749648;XP_032749649 transcription factor Spi-B protein-coding 625874361 Rnf38 ring finger protein 38 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN male gonad development (ortholog); protein ubiquitination (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); sperm flagellum (ortholog) 1 2279432 2386938 + 116890868 MODEL JAAIVD010000025;XM_032891446;XM_032891455;XM_032891464;XM_032891474;XM_032891483;XM_032891493;XM_032891502;XM_032891510;XM_032891519 XP_032747337;XP_032747346;XP_032747355;XP_032747365;XP_032747374;XP_032747384;XP_032747393;XP_032747401;XP_032747410 E3 ubiquitin-protein ligase RNF38 protein-coding 625874393 Edc4 enhancer of mRNA decapping 4 PARTICIPATES IN microRNA pathway; FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 17 25620824 25632836 + 22301074;30032202 116886250 MODEL JAAIVD010000011;XM_032887665;XM_032887666;XM_032887667;XM_032887668 XP_032743556;XP_032743557;XP_032743558;XP_032743559 enhancer of mRNA-decapping protein 4 protein-coding 625874431 LOC116896462 signal recognition particle subunit SRP72-like 1 82070209 82177590 + 116896462 MODEL JAAIVD010000025 pseudo 625874432 Kcnk2 potassium two pore domain channel subfamily K member 2 ENCODES a protein that exhibits identical protein binding (ortholog); ligand-gated channel activity (ortholog); mechanosensitive potassium channel activity (ortholog); INVOLVED IN cardiac ventricle development (ortholog); cellular response to arachidonate (ortholog); cellular response to hypoxia (ortholog); ASSOCIATED WITH brain ischemia (ortholog); congestive heart failure (ortholog); depressive disorder (ortholog); FOUND IN apical plasma membrane (ortholog); astrocyte projection (ortholog); axon (ortholog) 10 67310818 67444747 - 22301074;30032202 116911098 MODEL JAAIVD010000005;XM_032914929 XP_032770820 potassium channel subfamily K member 2 protein-coding 625874443 Ndrg1 N-myc downstream regulated 1 ENCODES a protein that exhibits cadherin binding (ortholog); gamma-tubulin binding (ortholog); microtubule binding (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); mast cell activation (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease type 4 (ortholog); FOUND IN adherens junction (ortholog); centrosome (ortholog); cytoplasm (ortholog) 1 241045135 241086590 - 30032202 116912299 MODEL JAAIVD010000025;XM_032916310 XP_032772201 protein NDRG1 protein-coding 625874463 Amn1 antagonist of mitotic exit network 1 homolog FOUND IN microvillus membrane (ortholog) 6 6816782 6843294 - 22301074;30032202 116903117 MODEL JAAIVD010000024;XM_032905453;XM_032905454 XP_032761344;XP_032761345 protein AMN1 homolog protein-coding 625874477 Ripor3 RIPOR family member 3 ASSOCIATED WITH prostate cancer (ortholog) 5 150001594 150028870 + 116902304 MODEL JAAIVD010000023;XM_032904748 XP_032760639 protein-coding 625874501 Trnaf-gaa transfer RNA phenylalanine (anticodon GAA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889661 MODEL JAAIVD010000045 trna 625874502 LOC116886556 uncharacterized LOC116886556 17 14224301 14229546 + 116886556 MODEL JAAIVD010000011;XR_004386115 ncrna 625874506 LOC116889773 olfactory receptor 1J2-like 22301074 116889773 MODEL JAAIVD010000124;XM_032890630 XP_032746521 protein-coding 625874507 Esyt3 extended synaptotagmin 3 FOUND IN cytoplasmic side of plasma membrane (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog) 8 90656930 90701893 - 22301074 116907217 MODEL JAAIVD010000027;XM_032910183 XP_032766074 extended synaptotagmin-3 protein-coding 625874534 LOC116897527 small nucleolar RNA SNORA48 3 85630073 85630212 + 116897527 MODEL JAAIVD010000012;XR_004387543 snorna 625874537 Gabrg1 gamma-aminobutyric acid type A receptor subunit gamma1 ENCODES a protein that exhibits GABA receptor binding (ortholog); GABA-A receptor activity (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); ASSOCIATED WITH prostate cancer (ortholog); trigeminal neuralgia (ortholog); FOUND IN plasma membrane (ortholog); signaling receptor complex (ortholog) 11 27634095 27709557 - 22301074;30032202 116912411 MODEL JAAIVD010000006;XM_032916472;XM_032916473 XP_032772363;XP_032772364 gamma-aminobutyric acid receptor subunit gamma-1 protein-coding 625874553 LOC116909059 keratin-associated protein 17-1 9 54732518 54732838 - 116909059 MODEL JAAIVD010000002;XM_032912537 XP_032768428 protein-coding 625874556 Gpr160 G protein-coupled receptor 160 FOUND IN plasma membrane (ortholog); signaling receptor complex (ortholog) 3 125080930 125124326 + 30032202 116896978 MODEL JAAIVD010000012;XM_032898561;XM_032898562 XP_032754452;XP_032754453 probable G-protein coupled receptor 160 protein-coding 625874569 Trnag-ucc transfer RNA glycine (anticodon UCC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 10 50240822 50240893 - 116911918 MODEL JAAIVD010000005 trna 625874570 LOC116892060 heat shock cognate 71 kDa protein-like 2 148289753 148291379 - 116892060 MODEL JAAIVD010000001 pseudo 625874571 Atg16l2 autophagy related 16 like 2 INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); macroautophagy (ortholog); PARTICIPATES IN autophagy pathway; FOUND IN Atg12-Atg5-Atg16 complex (ortholog); autophagosome (ortholog); cytosol (ortholog) 2 99597811 99610345 - 22301074;30032202 116891754 MODEL JAAIVD010000001;XM_032893069;XM_032893070;XM_032893071;XM_032893072;XM_032893073;XM_032893074;XM_032893075;XM_032893076;XM_032893077;XM_032893078 XP_032748960;XP_032748961;XP_032748962;XP_032748963;XP_032748964;XP_032748965;XP_032748966;XP_032748967;XP_032748968;XP_032748969 autophagy-related protein 16-2 protein-coding 625874622 LOC116894251 olfactory receptor 14A2-like 2 114915615 114916554 - 116894251 MODEL JAAIVD010000001 pseudo 625874623 LOC116891934 AP-3 complex subunit sigma-2 2 120330545 120370169 + 22301074;30032202 116891934 MODEL JAAIVD010000001;XM_032893374 XP_032749265 protein-coding 625874633 Abr ABR activator of RhoGEF and GTPase ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); activation of GTPase activity (ortholog); brain development (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) 9 95122214 95318103 - 22301074;30032202 116908894 MODEL JAAIVD010000002;XM_032912343;XM_032912344;XM_032912345;XM_032912346;XM_032912348;XM_032912349 XP_032768234;XP_032768235;XP_032768236;XP_032768237;XP_032768239;XP_032768240 active breakpoint cluster region-related protein protein-coding 625874678 Tfpi2 tissue factor pathway inhibitor 2 INVOLVED IN cellular response to fluid shear stress (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); Carotid Artery Injuries (ortholog) 6 134641348 134646223 + 22301074;30032202 116902984 MODEL JAAIVD010000024;XM_032905303 XP_032761194 protein-coding 625874687 LOC116889639 Y-linked testis-specific protein 1-like 22301074;30032202 116889639 MODEL JAAIVD010000021;XM_032890548 XP_032746439 protein-coding 625874688 LOC116903705 kinetochore-associated protein NSL1 homolog 6 7048916 7050369 + 116903705 MODEL JAAIVD010000024 pseudo 625874689 LOC116906438 small nucleolar RNA SNORA17 7 41799030 41799164 + 116906438 MODEL JAAIVD010000026;XR_004388698 snorna 625874692 Vax2 ventral anterior homeobox 2 ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN axonogenesis (ortholog); camera-type eye development (ortholog); dorsal/ventral axis specification (ortholog); ASSOCIATED WITH syndromic microphthalmia 5 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 6 62512103 62536423 - 22301074;30032202 116903600 MODEL JAAIVD010000024;XM_032906242 XP_032762133 protein-coding 625874698 Fjx1 four-jointed box kinase 1 INVOLVED IN retina layer formation (ortholog); ASSOCIATED WITH Brain Neoplasms (ortholog); FOUND IN extracellular region (ortholog) 5 80286301 80289028 - 30032202 116901678 MODEL JAAIVD010000023;XM_032903791 XP_032759682 four-jointed box protein 1 protein-coding 625874703 LOC116906847 nuclear transport factor 2-like 1 157365405 157367129 + 30032202 116906847 MODEL JAAIVD010000025;XM_032909745 XP_032765636 protein-coding 625874708 Ncoa2 nuclear receptor coactivator 2 ENCODES a protein that exhibits aryl hydrocarbon receptor binding (ortholog); chromatin binding (ortholog); DNA polymerase binding (ortholog); INVOLVED IN cellular response to Thyroglobulin triiodothyronine (ortholog); cerebellum development (ortholog); circadian regulation of gene expression (ortholog); PARTICIPATES IN aldosterone signaling pathway; altered androgen signaling pathway; androgen signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); Chronobiology Disorders (ortholog); FOUND IN cytoplasm (ortholog); dendritic spine (ortholog); nuclear body (ortholog) 1 147788299 147868292 - 22301074;30032202 116903968 MODEL JAAIVD010000025;XM_032906771 XP_032762662 protein-coding 625874733 Adam19 ADAM metallopeptidase domain 19 ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); SH3 domain binding (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); heart development (ortholog); membrane protein ectodomain proteolysis (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH congenital heart disease (ortholog); lung adenocarcinoma (ortholog); squamous cell carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); nucleus (ortholog) 9 28777995 28868181 + 22301074;30032202 116908728 MODEL JAAIVD010000002;XM_032912071 XP_032767962 disintegrin and metalloproteinase domain-containing protein 19 protein-coding 625874760 LOC116885413 40S ribosomal protein S27 16 9322598 9322926 - 22301074;30032202 116885413 MODEL JAAIVD010000004;XM_032886700 XP_032742591 protein-coding 625874764 Cimip2a ciliary microtubule inner protein 2A INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); ciliary basal body (ortholog); sperm flagellum (ortholog) 5 11958606 11962893 - 116901318 MODEL JAAIVD010000023;XM_032903130 XP_032759021 Fam166a family with sequence similarity 166 member A;protein FAM166A protein-coding 625874774 Kdm5b lysine demethylase 5B ENCODES a protein that exhibits DNA binding (ortholog); histone binding (ortholog); histone H3K4 demethylase activity (ortholog); INVOLVED IN branching involved in mammary gland duct morphogenesis (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); cellular response to leukemia inhibitory factor (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal recessive intellectual developmental disorder 65 (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); ribonucleoprotein complex (ortholog) 10 1078328 1150141 - 22301074;30032202 116911737 MODEL JAAIVD010000005;XM_032915717 XP_032771608 lysine-specific demethylase 5B protein-coding 625874805 Glmp glycosylated lysosomal membrane protein INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); protein localization to lysosome (ortholog); protein stabilization (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytosol (ortholog); lysosome (ortholog); membrane (ortholog) 3 65223151 65226641 - 30032202 116896692 MODEL JAAIVD010000012;XM_032898084 XP_032753975 protein-coding 625874815 LOC116885130 acyl-CoA-binding protein-like 16 36399560 36399976 + 22301074;30032202 116885130 MODEL JAAIVD010000004;XM_032886287 XP_032742178 protein-coding 625874820 LOC116896003 UDP-glucuronosyltransferase 3A2-like 3 171252882 171270482 - 116896003 MODEL JAAIVD010000012 pseudo 625874821 Smim40 small integral membrane protein 40 18 6914865 6915107 + 116887500 MODEL JAAIVD010000013;XM_032889119 XP_032745010 protein-coding 625874824 LOC116896688 polyamine-modulated factor 1 3 65153702 65172767 + 22301074;30032202 116896688 MODEL JAAIVD010000012;XM_032898077 XP_032753968 protein-coding 625874833 Hbegf heparin binding EGF like growth factor ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); growth factor activity (ortholog); heparin binding (ortholog); INVOLVED IN cell chemotaxis (ortholog); cell migration (ortholog); epidermal growth factor receptor signaling pathway (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Animal Disease Models (ortholog); Cardiotoxicity (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); plasma membrane (ortholog) 15 7867903 7878942 + 30032202 116884645 MODEL JAAIVD010000010;XM_032885793 XP_032741684 proheparin-binding EGF-like growth factor protein-coding 625874843 LOC116915052 elongin-B-like 13 46598494 46598849 - 116915052 MODEL JAAIVD010000008 pseudo 625874844 LOC116906061 exosome complex component RRP4-like 7 50489790 50490679 - 116906061 MODEL JAAIVD010000026 pseudo 625874845 Tnip3 TNFAIP3 interacting protein 3 ENCODES a protein that exhibits polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); MyD88-independent toll-like receptor signaling pathway (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog) 6 75983458 76026992 - 30032202 116902778 MODEL JAAIVD010000024;XM_032905120 XP_032761011 TNFAIP3-interacting protein 3 protein-coding 625874856 Itih6 inter-alpha-trypsin inhibitor heavy chain family member 6 ASSOCIATED WITH Dwarfism (ortholog); Neurodevelopmental Disorders (ortholog) X 12184710 12214231 + 22301074 116889333 MODEL JAAIVD010000014;XM_032890451 XP_032746342 inter-alpha-trypsin inhibitor heavy chain H6 protein-coding 625874872 Il18 interleukin 18 ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-18 receptor binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell population proliferation (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-23 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); alcoholic hepatitis (ortholog); FOUND IN apical plasma membrane (ortholog); extracellular region (ortholog) 8 45029011 45055185 + 22301074 116906731 MODEL JAAIVD010000027;XM_032909544 XP_032765435 interleukin-18 protein-coding 625874883 Pcna proliferating cell nuclear antigen ENCODES a protein that exhibits chromatin binding (ortholog); damaged DNA binding (ortholog); dinucleotide insertion or deletion binding (ortholog); INVOLVED IN base-excision repair, gap-filling (ortholog); cellular response to hydrogen peroxide (ortholog); cellular response to UV (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH adenocarcinoma (ortholog); alcohol-associated liver disease (ortholog); Ataxia Telangiectasia Like Disorder (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog) 5 111963794 111967807 - 22301074;30032202 116902001 MODEL JAAIVD010000023;XM_032904265 XP_032760156 protein-coding 625874893 LOC116898511 poly(rC)-binding protein 4-like 4 132765696 132766633 + 116898511 MODEL JAAIVD010000003 pseudo 625874894 Cnr1 cannabinoid receptor 1 ENCODES a protein that exhibits cannabinoid receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); axonal fasciculation (ortholog); cannabinoid signaling pathway (ortholog); PARTICIPATES IN N-cadherin signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); Alcohol Withdrawal Delirium (ortholog); FOUND IN axon (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) 1 109070115 109095467 - 22301074 116902250 MODEL JAAIVD010000025;XM_032904671;XM_032904678;XM_032904685;XM_032904694;XM_032904704 XP_032760562;XP_032760569;XP_032760576;XP_032760585;XP_032760595 protein-coding 625874913 LOC116898540 40S ribosomal protein S8-like 4 146586534 146589880 - 116898540 MODEL JAAIVD010000003 pseudo 625874914 LOC116907873 60S ribosomal protein L27-like 8 93858785 93859185 + 116907873 MODEL JAAIVD010000027 pseudo 625874915 Peak1 pseudopodium enriched atypical kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); INVOLVED IN cell migration (ortholog); focal adhesion assembly (ortholog); protein autophosphorylation (ortholog); FOUND IN actin cytoskeleton (ortholog); focal adhesion (ortholog) 8 50124096 50327380 - 22301074;30032202 116906763 MODEL JAAIVD010000027;XM_032909600;XM_032909603;XM_032909604;XM_032909605;XM_032909606 XP_032765491;XP_032765494;XP_032765495;XP_032765496;XP_032765497 inactive tyrosine-protein kinase PEAK1 protein-coding 625874937 Dtymk deoxythymidylate kinase ENCODES a protein that exhibits ATP binding (ortholog); dTMP kinase activity (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); dTDP biosynthetic process (ortholog); dTTP biosynthetic process (ortholog); ASSOCIATED WITH Experimental Liver Neoplasms (ortholog); NEURODEGENERATION, CHILDHOOD-ONSET, WITH PROGRESSIVE MICROCEPHALY (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 4 165706723 165715245 - 22301074;30032202 116899672 MODEL JAAIVD010000003;XM_032901688;XM_032901689;XM_032901690 XP_032757579;XP_032757580;XP_032757581 thymidylate kinase protein-coding 625874955 Fcmr Fc mu receptor ENCODES a protein that exhibits high-affinity IgM receptor activity (ortholog); IgM binding (ortholog); polymeric immunoglobulin binding (ortholog); INVOLVED IN Fc receptor-mediated immune complex endocytosis (ortholog); humoral immune response mediated by circulating immunoglobulin (ortholog); immunoglobulin transcytosis in epithelial cells (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog); FOUND IN cell surface (ortholog); early endosome membrane (ortholog); external side of plasma membrane (ortholog) 10 4925501 4942997 - 30032202 116911235 MODEL JAAIVD010000005;XM_032915135 XP_032771026 Fc fragment of IgM receptor;fas apoptotic inhibitory molecule 3 protein-coding 625874967 LOC116896066 casein kinase I-like 3 207916028 207917039 + 116896066 MODEL JAAIVD010000012 pseudo 625874968 Rps6ka4 ribosomal protein S6 kinase A4 ENCODES a protein that exhibits ATP binding (ortholog); histone H3S10 kinase activity (ortholog); histone H3S28 kinase activity (ortholog); INVOLVED IN interleukin-1-mediated signaling pathway (ortholog); intracellular signal transduction (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; the extracellular signal-regulated Raf/Mek/Erk signaling pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog); synapse (ortholog) 2 957011 967842 + 22301074;30032202 116894823 MODEL JAAIVD010000001;XM_032896496 XP_032752387 ribosomal protein S6 kinase alpha-4 protein-coding 625874989 LOC116909902 olfactory receptor 2AK2-like 9 39350058 39350978 - 22301074 116909902 MODEL JAAIVD010000002;XM_032913653 XP_032769544 protein-coding 625874992 LOC116913464 complement C1q and tumor necrosis factor-related protein 9 12 63650962 63662855 - 22301074 116913464 MODEL JAAIVD010000007;XM_032917668;XM_032917669 XP_032773559;XP_032773560 protein-coding 625875003 Kcnq5 potassium voltage-gated channel subfamily Q member 5 ENCODES a protein that exhibits voltage-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); voltage-gated potassium channel activity (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); potassium ion transport (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder (ortholog); autosomal dominant intellectual developmental disorder 46 (ortholog); congenital diaphragmatic hernia (ortholog); FOUND IN calyx of Held (ortholog); clathrin coat (ortholog); plasma membrane (ortholog) 4 98752531 99302666 - 22301074;30032202 116899250 MODEL JAAIVD010000003;XM_032900855 XP_032756746 potassium voltage-gated channel subfamily KQT member 5 protein-coding 625875021 LOC116893084 protein crumbs homolog 1-like 2 51406384 51478818 - 116893084 MODEL JAAIVD010000001 pseudo 625875022 LOC116887153 60S ribosomal protein L21 1 38036969 38037451 - 22301074;30032202 116887153 MODEL JAAIVD010000025;XM_032888704 XP_032744595 protein-coding 625875025 Mnt MAX network transcriptional repressor ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cellular senescence (ortholog); negative regulation of apoptotic signaling pathway (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Classical Lissencephalies and Subcortical Band Heterotopias (ortholog); cleft palate (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 9 93572982 93588075 + 22301074;30032202 116908977 MODEL JAAIVD010000002;XM_032912442 XP_032768333 max-binding protein MNT protein-coding 625875035 LOC116892918 ADP-ribosylation factor 1-like 2 203566651 203568399 + 116892918 MODEL JAAIVD010000001;XR_004386985 pseudo 625875039 LOC116886754 5S ribosomal RNA 17 43155405 43155523 - 116886754 MODEL JAAIVD010000011;XR_004386156 rrna 625875042 Aldh9a1 aldehyde dehydrogenase 9 family member A1 ENCODES a protein that exhibits 4-trimethylammoniobutyraldehyde dehydrogenase activity (ortholog); aldehyde dehydrogenase (NAD+) activity (ortholog); amine binding (ortholog); INVOLVED IN aldehyde metabolic process (ortholog); carnitine biosynthetic process (ortholog); carnitine metabolic process (ortholog); PARTICIPATES IN carnitine biosynthetic pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog); prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 10 46674132 46689653 + 30032202 116911209 MODEL JAAIVD010000005;XM_032915086 XP_032770977 4-trimethylaminobutyraldehyde dehydrogenase protein-coding 625875057 Mafg MAF bZIP transcription factor G ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN adult behavior (ortholog); in utero embryonic development (ortholog); positive regulation of gene expression (ortholog); PARTICIPATES IN nuclear factor, erythroid 2 like 2 signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); hereditary breast ovarian cancer syndrome (ortholog); intrahepatic cholestasis (ortholog) 9 63390223 63397791 + 30032202 116908519 MODEL JAAIVD010000002;XM_032911694 XP_032767585 transcription factor MafG protein-coding 625875065 Pkig cAMP-dependent protein kinase inhibitor gamma ENCODES a protein that exhibits cAMP-dependent protein kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of protein import into nucleus (ortholog); negative regulation of protein kinase activity (ortholog); negative regulation of transcription by RNA polymerase II (ortholog) 5 154244215 154310860 - 22301074;30032202 116902375 MODEL JAAIVD010000023;XM_032904874;XM_032904875;XM_032904876;XM_032904878 XP_032760765;XP_032760766;XP_032760767;XP_032760769 protein-coding 625875081 LOC116884941 tubulin alpha-1C chain-like 15 23155318 23157432 - 116884941 MODEL JAAIVD010000010 pseudo 625875082 LOC116886277 40S ribosomal protein S2-like 17 16716234 16716882 - 22301074;30032202 116886277 MODEL JAAIVD010000011;XM_032887698 XP_032743589 protein-coding 625875087 LOC116904256 olfactory receptor 6C76-like 6 30199136 30203064 - 22301074;30032202 116904256 MODEL JAAIVD010000024;XM_032907210 XP_032763101 protein-coding 625875092 LOC116887962 GTPase HRas-like X 65922007 65922961 - 116887962 MODEL JAAIVD010000014 pseudo 625875093 LOC116884854 nucleolar protein 4-like 15 20834078 20871981 + 116884854 MODEL JAAIVD010000010;XM_032886097 XP_032741988 protein-coding 625875101 LOC116910870 uncharacterized LOC116910870 10 52072243 52074380 - 116910870 MODEL JAAIVD010000005;XR_004389287 ncrna 625875106 Armc3 armadillo repeat containing 3 INVOLVED IN flagellated sperm motility (ortholog); ribophagy (ortholog); spermatid development (ortholog); ASSOCIATED WITH Familial Persistent Stuttering 4 (ortholog) 14 4780799 4865338 - 22301074 116883437 MODEL JAAIVD010000009;XM_032884577;XM_032884578;XM_032884579;XM_032884580 XP_032740468;XP_032740469;XP_032740470;XP_032740471 armadillo repeat-containing protein 3 protein-coding 625875137 Tmem165 transmembrane protein 165 INVOLVED IN calcium ion transport (ortholog); Golgi calcium ion transport (ortholog); manganese ion transport (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation type IIk (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cis-Golgi network membrane (ortholog); endosome membrane (ortholog); Golgi apparatus (ortholog) 11 32928671 32954061 + 30032202 116912652 MODEL JAAIVD010000006;XM_032916772 XP_032772663 protein-coding 625875147 Utp14a UTP14A small subunit processome component FOUND IN nucleolus (ortholog) X 110125805 110152203 - 30032202 116888650 MODEL JAAIVD010000014;XM_032889940 XP_032745831 U3 small nucleolar RNA-associated protein 14 homolog A protein-coding 625875166 LOC116896612 protein argonaute-1 1 31833722 31868472 + 22301074 116896612 MODEL JAAIVD010000025;XM_032897871;XM_032897879;XM_032897887;XM_032897897 XP_032753762;XP_032753770;XP_032753778;XP_032753788 protein-coding 625875198 Nalf2 NALCN channel auxiliary factor 2 X 58450839 58474547 + 30032202 116889238 MODEL JAAIVD010000014;XM_032890388 XP_032746279 Fam155b family with sequence similarity 155 member B;transmembrane protein FAM155B protein-coding 625875205 LOC116894463 ubiquitin-conjugating enzyme E2 C-like 2 165666843 165667246 - 116894463 MODEL JAAIVD010000001 pseudo 625875206 LOC116899947 U2 spliceosomal RNA 4 43815716 43815817 - 116899947 MODEL JAAIVD010000003 pseudo 625875207 Nsg1 neuronal vesicle trafficking associated 1 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN amyloid precursor protein metabolic process (ortholog); apoptotic process (ortholog); endosomal transport (ortholog); FOUND IN dendrite (ortholog); early endosome (ortholog); early endosome membrane (ortholog) 11 67029277 67051142 + 22301074;30032202 116912789 MODEL JAAIVD010000006;XM_032916951 XP_032772842 neuronal vesicle trafficking-associated protein 1 protein-coding 625875216 Arid1b AT-rich interaction domain 1B ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN cellular response to angiotensin (ortholog); dendritic cell dendrite assembly (ortholog); dendritic spine development (ortholog); PARTICIPATES IN altered SWI/SNF family mediated chromatin remodeling pathway; pancreatic cancer pathway; SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); autism spectrum disorder (ortholog); blepharophimosis (ortholog); FOUND IN nBAF complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 193471622 193817118 - 22301074;30032202 116892862 MODEL AJ005202;JAAIVD010000001;XM_032894759 CAC43233;XP_032750650 6A3-5 protein;AT-rich interactive domain-containing protein 1B protein-coding 625875240 Fam43a family with sequence similarity 43 member A ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 4 15528176 15531355 + 116898750 MODEL JAAIVD010000003;XM_032900068 XP_032755959 protein FAM43A protein-coding 625875245 Osbpl1a oxysterol binding protein like 1A ENCODES a protein that exhibits cholesterol binding (ortholog); sterol sensor activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); lysosome to ER cholesterol transport (ortholog); FOUND IN endoplasmic reticulum-endosome membrane contact site (ortholog); endosome (ortholog); late endosome (ortholog) 15 30762551 30949460 + 22301074;30032202 116884777 MODEL JAAIVD010000010;XM_032886004;XM_032886005;XM_032886006;XM_032886007 XP_032741895;XP_032741896;XP_032741897;XP_032741898 oxysterol-binding protein-related protein 1 protein-coding 625875284 Cuta cutA divalent cation tolerance homolog ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN intracellular protein localization (ortholog); FOUND IN membrane (ortholog); mitochondrion (ortholog) 18 6864785 6866409 + 22301074;30032202 116887653 MODEL JAAIVD010000013;XM_032889254;XM_032889255;XM_032889256 XP_032745145;XP_032745146;XP_032745147 protein CutA protein-coding 625875303 Rpl8 ribosomal protein L8 ENCODES a protein that exhibits 5.8S rRNA binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic large ribosomal subunit (ortholog) 1 249231651 249234027 + 22301074;30032202 116913452 MODEL JAAIVD010000025;X62145;XM_032917654 CAA44071;XP_032773545 60S ribosomal protein L8 protein-coding 625875313 Cald1 caldesmon 1 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); positive regulation of protein binding (ortholog); ASSOCIATED WITH Acute Otitis Media (ortholog); Experimental Diabetes Mellitus (ortholog); proliferative diabetic retinopathy (ortholog); FOUND IN actin cap (ortholog); actin cytoskeleton (ortholog); actin filament (ortholog) 6 104882693 105057953 - 22301074;30032202 116903975 MODEL JAAIVD010000024;XM_032906782 XP_032762673 caldesmon protein-coding 625875331 LOC116896145 geranylgeranyl transferase type-2 subunit beta-like 3 7734898 7737584 + 116896145 MODEL JAAIVD010000012;XR_004387316 pseudo 625875336 Septin5 septin 5 ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); identical protein binding (ortholog); INVOLVED IN adult behavior (ortholog); negative regulation of regulated secretory pathway (ortholog); regulation of exocytosis (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Polyarteritis Nodosa, Childhood-Onset (ortholog); FOUND IN axon terminus (ortholog); calyx of Held (ortholog); cell cortex (ortholog) 4 3873065 3881305 - 22301074;30032202 116898674 MODEL JAAIVD010000003;XM_032899923;XM_032899924 XP_032755814;XP_032755815 septin-5 protein-coding 625875357 LOC116888293 THO complex subunit 2-like X 108702827 108775064 - 30032202 116888293 MODEL JAAIVD010000014;XM_032889566 XP_032745457 protein-coding 625875383 Col4a6 collagen type IV alpha 6 chain ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); collagen-activated tyrosine kinase receptor signaling pathway (ortholog); extracellular matrix organization (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Epithelioid Leiomyoma (ortholog); Spontaneous Abortions (ortholog); X-linked deafness 6 (ortholog); FOUND IN basement membrane (ortholog); collagen type IV trimer (ortholog) X 93845112 93916885 + 22301074;30032202 116888090 MODEL JAAIVD010000014;XM_032889457 XP_032745348 collagen alpha-6(IV) chain protein-coding 625875429 LOC116896047 60S ribosomal protein L7a-like 3 199287133 199290352 + 116896047 MODEL JAAIVD010000012 pseudo 625875430 Faf2 Fas associated factor family member 2 ENCODES a protein that exhibits lipase binding (ortholog); lipase inhibitor activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN ERAD pathway (ortholog); lipid droplet organization (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN endoplasmic reticulum (ortholog); lipid droplet (ortholog); VCP-NPL4-UFD1 AAA ATPase complex (ortholog) 14 72964938 73007868 + 30032202 116883282 MODEL JAAIVD010000009;XM_032884273;XM_032884274 XP_032740164;XP_032740165 FAS-associated factor 2 protein-coding 625875447 Rps24 ribosomal protein S24 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); translation initiation factor binding (ortholog); INVOLVED IN cytoplasmic translation (ortholog); erythrocyte homeostasis (ortholog); liver regeneration (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH congenital hypoplastic anemia (ortholog); Diamond-Blackfan anemia (ortholog); Diamond-Blackfan anemia 3 (ortholog); FOUND IN cytosol (ortholog); cytosolic ribosome (ortholog); cytosolic small ribosomal subunit (ortholog) 13 654984 659656 + 22301074;2275563;30032202 116914638 MODEL JAAIVD010000008;X51538;XM_032919027;XM_032919028;XM_032919029;XM_032919030;XM_032919032 CAA35918;XP_032774918;XP_032774919;XP_032774920;XP_032774921;XP_032774923 40S ribosomal protein S24 protein-coding 625875465 Mta3 metastasis associated 1 family member 3 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); negative regulation of DNA-templated transcription (ortholog); positive regulation of cell population proliferation (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; ASSOCIATED WITH Dwarfism (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 7 9125385 9244426 - 22301074;30032202 116905788 MODEL JAAIVD010000026;XM_032908765 XP_032764656 metastasis-associated protein MTA3 protein-coding 625875487 LOC116905811 acyl-coenzyme A thioesterase 1 7 98092439 98100434 + 22301074;30032202 116905811 MODEL JAAIVD010000026;XM_032908779;XM_032908780;XM_032908781 XP_032764670;XP_032764671;XP_032764672 protein-coding 625875501 LOC116911628 60S ribosomal protein L15-like 10 32392337 32392986 + 116911628 MODEL JAAIVD010000005 pseudo 625875502 Cdh22 cadherin 22 INVOLVED IN calcium-dependent cell-cell adhesion (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog) 5 152726833 152850017 + 22301074;30032202 116902337 MODEL JAAIVD010000023;XM_032904814 XP_032760705 cadherin-22 protein-coding 625875518 Zbtb20 zinc finger and BTB domain containing 20 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); lipid homeostasis (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 4 28271708 28529209 + 22301074;30032202 116898854 MODEL JAAIVD010000003;XM_032900207;XM_032900208;XM_032900209;XM_032900211;XM_032900212;XM_032900213;XM_032900214;XM_032900215;XM_032900216 XP_032756098;XP_032756099;XP_032756100;XP_032756102;XP_032756103;XP_032756104;XP_032756105;XP_032756106;XP_032756107 zinc finger and BTB domain-containing protein 20 protein-coding 625875546 Gpr35 G protein-coupled receptor 35 ENCODES a protein that exhibits C-X-C chemokine receptor activity (ortholog); chemokine receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); chemokine-mediated signaling pathway (ortholog); cytoskeleton organization (ortholog); FOUND IN plasma membrane (ortholog) 4 164910599 164930881 + 22301074;30032202 116899653 MODEL JAAIVD010000003;XM_032901661 XP_032757552 G-protein coupled receptor 35 protein-coding 625875552 LOC116887709 patr class I histocompatibility antigen, A-2 alpha chain-like 18 9744670 9746801 + 30032202 116887709 MODEL JAAIVD010000013;XM_032889308;XM_032889309 XP_032745199;XP_032745200 protein-coding 625875562 Brat1 BRCA1 associated ATM activator 1 ENCODES a protein that exhibits ribonuclease inhibitor activity (ortholog); INVOLVED IN apoptotic process (ortholog); cell migration (ortholog); cell population proliferation (ortholog); ASSOCIATED WITH epilepsy (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 16 12488236 12499668 - 22301074;30032202 116885554 MODEL JAAIVD010000004;XM_032886846 XP_032742737 BRCA1-associated ATM activator 1 protein-coding 625875579 Zfyve28 zinc finger FYVE-type containing 28 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN negative regulation of epidermal growth factor receptor signaling pathway (ortholog); negative regulation of epidermal growth factor-activated receptor activity (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytosol (ortholog); early endosome membrane (ortholog) 11 77076466 77161727 - 22301074;30032202 116912098 MODEL JAAIVD010000006;XM_032915991;XM_032915992;XR_004389422;XR_004389423 XP_032771882;XP_032771883 lateral signaling target protein 2 homolog protein-coding 625875606 LOC116901472 uncharacterized LOC116901472 5 44921537 45098756 + 116901472 MODEL JAAIVD010000023;XR_004387998 ncrna 625875611 Casc3 CASC3 exon junction complex subunit ENCODES a protein that exhibits DEAD/H-box RNA helicase binding (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN intracellular mRNA localization (ortholog); mRNA splicing, via spliceosome (ortholog); regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); FOUND IN cytoplasm (ortholog); exon-exon junction complex (ortholog); nuclear membrane (ortholog) 9 55605639 55628327 - 22301074;30032202 116908851 MODEL JAAIVD010000002;XM_032912291 XP_032768182 protein CASC3 protein-coding 625875629 LOC116904334 L-lactate dehydrogenase A chain-like 6 65743483 65744488 + 116904334 MODEL JAAIVD010000024 pseudo 625875630 Smim5 small integral membrane protein 5 9 68154859 68160596 - 116909816 MODEL JAAIVD010000002;XM_032913519;XR_004389100 XP_032769410 protein-coding 625875640 LOC116884069 small nucleolar RNA SNORA48 14 41213876 41214016 + 116884069 MODEL JAAIVD010000009;XR_004385817 snorna 625875643 Rpe ribulose-5-phosphate-3-epimerase ENCODES a protein that exhibits carbohydrate binding (ortholog); D-ribulose-phosphate 3-epimerase activity (ortholog); identical protein binding (ortholog); INVOLVED IN carbohydrate metabolic process (ortholog); pentose-phosphate shunt (ortholog); pentose-phosphate shunt, non-oxidative branch (ortholog); PARTICIPATES IN pentose phosphate pathway; pentose phosphate pathway - non-oxidative phase; ribose 5-phosphate isomerase deficiency pathway; FOUND IN cytosol (ortholog) 4 140150241 140170085 - 22301074;30032202 116899469 MODEL JAAIVD010000003;XM_032901280;XM_032901281;XM_032901282;XM_032901283;XM_032901284;XM_032901285;XM_032901286;XM_032901287;XM_032901289;XM_032901290;XM_032901291 XP_032757171;XP_032757172;XP_032757173;XP_032757174;XP_032757175;XP_032757176;XP_032757177;XP_032757178;XP_032757180;XP_032757181;XP_032757182 ribulose-phosphate 3-epimerase protein-coding 625875684 Sdr9c7 short chain dehydrogenase/reductase family 9C member 7 ENCODES a protein that exhibits all-trans-retinol dehydrogenase (NAD+) activity (ortholog); ASSOCIATED WITH autosomal recessive congenital ichthyosis (ortholog); autosomal recessive congenital ichthyosis 13 (ortholog); genetic disease (ortholog) 1 206296736 206308406 + 22301074 116910315 MODEL JAAIVD010000025;XM_032914181 XP_032770072 short-chain dehydrogenase/reductase family 9C member 7 protein-coding 625875691 Nrdc nardilysin convertase ENCODES a protein that exhibits endopeptidase activator activity (ortholog); peptidase activity (ortholog); INVOLVED IN negative regulation of cold-induced thermogenesis (ortholog); positive regulation of axonogenesis (ortholog); positive regulation of membrane protein ectodomain proteolysis (ortholog); FOUND IN mitochondrial matrix (ortholog) 1 45796456 45858337 - 22301074 116899025 MODEL JAAIVD010000025;XM_032900477;XM_032900484 XP_032756368;XP_032756375 nardilysin protein-coding 625875731 Rngtt RNA guanylyltransferase and 5'-phosphatase ENCODES a protein that exhibits inorganic triphosphate phosphatase activity (ortholog); mRNA guanylyltransferase activity (ortholog); RNA guanylyltransferase activity (ortholog); INVOLVED IN 7-methylguanosine mRNA capping (ortholog); RNA processing (ortholog); PARTICIPATES IN 5'-end pre-mRNA capping pathway; RNA polymerase II transcription elongation pathway 1 109533141 109728279 - 22301074;30032202 116902294 MODEL JAAIVD010000025;XM_032904734;XM_032904743 XP_032760625;XP_032760634 mRNA-capping enzyme protein-coding 625875754 LOC116899939 U2 spliceosomal RNA 4 52456817 52456996 + 116899939 MODEL JAAIVD010000003 pseudo 625875755 LOC116885857 60S ribosomal protein L28-like 16 4477979 4478482 + 116885857 MODEL JAAIVD010000004 pseudo 625875756 Calr3 calreticulin 3 ENCODES a protein that exhibits calcium ion binding (ortholog); protein folding chaperone (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); cardiomyopathy (ortholog); dilated cardiomyopathy (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog); nuclear envelope (ortholog) 13 14242602 14267268 - 22301074;30032202 116914297 MODEL JAAIVD010000008;XM_032918539 XP_032774430 calreticulin-3 protein-coding 625875769 LOC116888948 egl nine homolog 1-like X 4021628 4023096 + 116888948 MODEL JAAIVD010000014 pseudo 625875770 LOC116902606 small nucleolar RNA SNORA17 5 24530942 24531086 - 116902606 MODEL JAAIVD010000023 pseudo 625875771 LOC116888047 osteoclast-stimulating factor 1-like X 86821330 86831854 - 116888047 MODEL JAAIVD010000014 pseudo 625875772 LOC116899842 small nucleolar RNA SNORA48 4 92179716 92179856 + 116899842 MODEL JAAIVD010000003;XR_004387839 snorna 625875775 LOC116896301 ADP/ATP translocase 1-like 1 81632791 81633418 - 116896301 MODEL JAAIVD010000025 pseudo 625875776 LOC116889776 von Willebrand factor A domain-containing protein 5B1-like 116889776 MODEL JAAIVD010000185;XM_032890632 XP_032746523 protein-coding 625875777 Stat6 signal transducer and activator of transcription 6 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); cellular response to hydrogen peroxide (ortholog); cellular response to reactive nitrogen species (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-4 signaling pathway; Jak-Stat signaling pathway; ASSOCIATED WITH asthma (ortholog); atopic dermatitis (ortholog); autoimmune disease (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 206088546 206108072 + 30032202 116910192 MODEL JAAIVD010000025;XM_032914058 XP_032769949 protein-coding 625875803 LOC116895077 small nucleolar RNA SNORA76 2 118714457 118714589 - 116895077 MODEL JAAIVD010000001;XR_004387246 snorna 625875806 CXHXorf38 chromosome X CXorf38 homolog FOUND IN mitochondrion (ortholog) X 8715280 8737463 + 116888991 MODEL JAAIVD010000014;XM_032890209 XP_032746100 uncharacterized protein CXorf38 homolog protein-coding 625875817 Lrrc1 leucine rich repeat containing 1 ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog) 8 71671964 71790301 - 22301074;30032202 116906614 MODEL JAAIVD010000027;XM_032909372 XP_032765263 leucine-rich repeat-containing protein 1 protein-coding 625875835 Capn2 calpain 2 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent cysteine-type endopeptidase activity (ortholog); calcium-dependent cysteine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN behavioral response to pain (ortholog); blastocyst development (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN the proteolytic pathway involving calcium-dependent proteases; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Anthracycline-induced Cardiotoxicity (ortholog); FOUND IN cell projection (ortholog); chromatin (ortholog); cytoplasm (ortholog) 10 60756499 60806979 - 22301074;30032202 116911755 MODEL JAAIVD010000005;XM_032915749 XP_032771640 calpain-2 catalytic subunit protein-coding 625875860 Riok3 RIO kinase 3 ENCODES a protein that exhibits caspase binding (ortholog); protein serine/threonine kinase activity (ortholog); ubiquitin-modified protein reader activity (ortholog); INVOLVED IN cellular response to dsDNA (ortholog); cellular response to dsRNA (ortholog); cellular response to virus (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH genetic disease (ortholog); FOUND IN cytosolic ribosome (ortholog); preribosome, small subunit precursor (ortholog) 15 31498536 31524003 - 22301074;30032202 116884269 MODEL JAAIVD010000010;XM_032885353 XP_032741244 serine/threonine-protein kinase RIO3 protein-coding 625875877 LOC116895204 cytochrome c oxidase assembly protein COX11, mitochondrial-like 3 1664413 1667405 + 116895204 MODEL JAAIVD010000012 pseudo 625875878 LOC116891872 olfactory receptor 14A2-like 2 114404700 114412243 + 116891872 MODEL JAAIVD010000001 pseudo 625875879 LOC116914926 40S ribosomal protein S7-like 13 5557878 5615281 + 116914926 MODEL JAAIVD010000008 pseudo 625875880 LOC116889990 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-like 1 174951893 174952375 + 116889990 MODEL JAAIVD010000025;XM_032890779 XP_032746670 protein-coding 625875885 Ermap erythroblast membrane associated protein (Scianna blood group) FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) 1 37761189 37771962 + 30032202 116887098 MODEL JAAIVD010000025;XM_032888623;XM_032888633 XP_032744514;XP_032744524 erythroid membrane-associated protein protein-coding 625875901 LOC116902922 hyaluronidase-5-like 6 114470778 114485460 - 22301074;30032202 116902922 MODEL JAAIVD010000024;XM_032905245 XP_032761136 protein-coding 625875906 LOC116915041 beta-defensin 12 13 65009166 65038421 + 22301074 116915041 MODEL JAAIVD010000008;XM_032919445 XP_032775336 protein-coding 625875912 Gna15 G protein subunit alpha 15 ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN eicosanoid signaling pathway; endothelin signaling pathway; G protein mediated signaling pathway via Galphaq family 1 153366501 153386293 + 22301074;30032202 116904210 MODEL JAAIVD010000025;XM_032907140 XP_032763031 guanine nucleotide-binding protein subunit alpha-15 protein-coding 625875923 LOC116883438 protein PIMREG-like 14 4831924 4832613 + 116883438 MODEL JAAIVD010000009;XM_032884581 XP_032740472 protein-coding 625875926 Nenf neudesin neurotrophic factor ENCODES a protein that exhibits growth factor activity (ortholog); INVOLVED IN negative regulation of appetite (ortholog); positive regulation of MAPK cascade (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog); mitochondrion (ortholog) 10 69399017 69405822 - 30032202 116911513 MODEL JAAIVD010000005;XM_032915502 XP_032771393 neudesin protein-coding 625875934 Gnl3l G protein nucleolar 3 like INVOLVED IN negative regulation of protein sumoylation (ortholog); negative regulation of protein ubiquitination (ortholog); negative regulation of telomere maintenance via telomerase (ortholog); FOUND IN nucleolus (ortholog); telomerase holoenzyme complex (ortholog) X 12364682 12395931 - 22301074;30032202 116888986 MODEL JAAIVD010000014;XM_032890204 XP_032746095 guanine nucleotide-binding protein-like 3-like protein protein-coding 625875952 LOC116884875 protocadherin gamma-B5-like 15 7190613 7195223 - 22301074 116884875 MODEL JAAIVD010000010;XM_032886121 XP_032742012 protein-coding 625875956 LOC116896460 uncharacterized LOC116896460 3 56454309 56459960 - 116896460 MODEL JAAIVD010000012;XR_004387338 ncrna 625875961 LOC116890632 U2 spliceosomal RNA 1 109076423 109076561 + 116890632 MODEL JAAIVD010000025 pseudo 625875962 Drc1 dynein regulatory complex subunit 1 INVOLVED IN axonemal dynein complex assembly (ortholog); axoneme assembly (ortholog); cilium organization (ortholog); ASSOCIATED WITH genetic disease (ortholog); Kartagener syndrome (ortholog); primary ciliary dyskinesia (ortholog); FOUND IN cilium (ortholog); cytosol (ortholog); sperm flagellum (ortholog) 7 23717325 23753095 - 30032202 116906008 MODEL JAAIVD010000026;XM_032909048 XP_032764939 dynein regulatory complex protein 1 protein-coding 625875983 LOC116887634 olfactory receptor 2J1-like 18 11088556 11099959 - 116887634 MODEL JAAIVD010000013 pseudo 625875984 Mkrn1 makorin ring finger protein 1 ENCODES a protein that exhibits chromatin binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); protein polyubiquitination (ortholog) 6 100371969 100393192 + 22301074;30032202 116903931 MODEL JAAIVD010000024;XM_032906701;XM_032906702;XM_032906703;XM_032906704 XP_032762592;XP_032762593;XP_032762594;XP_032762595 E3 ubiquitin-protein ligase makorin-1 protein-coding 625876005 Tmem256 transmembrane protein 256 FOUND IN mitochondrion (ortholog) 9 49445066 49446551 + 116908596 MODEL JAAIVD010000002;XM_032911819 XP_032767710 protein-coding 625876013 Swsap1 SWIM-type zinc finger 7 associated protein 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); single-stranded DNA binding (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); protein stabilization (ortholog); FOUND IN Shu complex (ortholog) 8 18206026 18208617 + 30032202 116907661 MODEL JAAIVD010000027;XM_032910753;XM_032910754 XP_032766644;XP_032766645 ATPase SWSAP1 protein-coding 625876023 Isca2 iron-sulfur cluster assembly 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN protein maturation (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); multiple mitochondrial dysfunctions syndrome (ortholog); FOUND IN mitochondrial [4Fe-4S] assembly complex (ortholog); mitochondrion (ortholog) 7 98881614 98883185 + 22301074;30032202 116905279 MODEL JAAIVD010000026;XM_032908138 XP_032764029 iron-sulfur cluster assembly 2 homolog, mitochondrial protein-coding 625876031 LOC116889379 60S ribosomal protein L11-like 1 132674011 132674566 + 116889379 MODEL JAAIVD010000025 pseudo 625876032 LOC116902138 putative testis-specific Y-encoded-like protein 3 5 132539275 132542003 - 22301074;30032202 116902138 MODEL JAAIVD010000023;XM_032904466 XP_032760357 protein-coding 625876037 LOC116897442 U6 spliceosomal RNA 3 7606524 7606632 - 116897442 MODEL JAAIVD010000012;XR_004387478 snrna 625876040 Sh3pxd2b SH3 and PX domains 2B ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); INVOLVED IN adipose tissue development (ortholog); bone development (ortholog); cranial skeletal system development (ortholog); ASSOCIATED WITH angle-closure glaucoma (ortholog); Animal Disease Models (ortholog); bone development disease (ortholog); FOUND IN cytoplasm (ortholog); podosome (ortholog) 9 5181723 5261997 + 22301074;30032202 116908780 MODEL JAAIVD010000002;XM_032912152 XP_032768043 SH3 and PX domain-containing protein 2B protein-coding 625876057 Crispld1 cysteine rich secretory protein LCCL domain containing 1 INVOLVED IN face morphogenesis (ortholog); hematopoietic stem cell homeostasis (ortholog) 1 151278641 151315955 + 22301074 116889845 MODEL JAAIVD010000025;XM_032890677;XM_032890678 XP_032746568;XP_032746569 cysteine-rich secretory protein LCCL domain-containing 1 protein-coding 625876080 LOC116912568 lymphocyte antigen 6D-like 1 247643010 247644830 - 30032202 116912568 MODEL JAAIVD010000025;XM_032916684 XP_032772575 protein-coding 625876087 LOC116902615 small nucleolar RNA SNORA40 5 138933608 138933731 + 116902615 MODEL JAAIVD010000023;XR_004388194 snorna 625876090 Ddx39a DExD-box helicase 39A ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); identical protein binding (ortholog); RNA binding (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); mRNA splicing, via spliceosome (ortholog); negative regulation of innate immune response (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 17 16552819 16561469 - 22301074;30032202 116886186 MODEL JAAIVD010000011;XM_032887556;XM_032887558;XM_032887559 XP_032743447;XP_032743449;XP_032743450 ATP-dependent RNA helicase DDX39A protein-coding 625876112 LOC116898383 protein O-glucosyltransferase 2-like 4 71891033 71892031 + 116898383 MODEL JAAIVD010000003 pseudo 625876113 LOC116889451 U6 spliceosomal RNA X 70605815 70605916 + 116889451 MODEL JAAIVD010000014;XR_004386409 snrna 625876116 Metrnl meteorin like, glial cell differentiation regulator ENCODES a protein that exhibits hormone activity (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); energy homeostasis (ortholog); fat cell differentiation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); glucose intolerance (ortholog); Insulin Resistance (ortholog); FOUND IN extracellular region (ortholog) 9 62321854 62335766 - 30032202 116909635 MODEL JAAIVD010000002;XM_032913276;XM_032913277 XP_032769167;XP_032769168 meteorin-like protein protein-coding 625876127 Fermt1 FERM domain containing kindlin 1 ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN basement membrane organization (ortholog); cell adhesion (ortholog); establishment of epithelial cell polarity (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH Atrophy (ortholog); Erythema (ortholog); genetic disease (ortholog); FOUND IN cell junction (ortholog); cell periphery (ortholog); cytoplasm (ortholog) 5 112609324 112643724 - 22301074;30032202 116902010 MODEL JAAIVD010000023;XM_032904277 XP_032760168 fermitin family homolog 1;fermitin family member 1 protein-coding 625876145 LOC116890902 vacuole membrane protein 1-like 2 8692072 8693587 - 116890902 MODEL JAAIVD010000001;XM_032891523 XP_032747414 protein-coding 625876150 LOC116893380 interferon lambda-2-like 2 167475660 167477231 - 22301074;30032202 116893380 MODEL JAAIVD010000001;XM_032895178 XP_032751069 protein-coding 625876157 Pkd1l3 polycystin 1 like 3, transient receptor potential channel interacting ENCODES a protein that exhibits calcium-activated cation channel activity (ortholog); monoatomic cation channel activity (ortholog); monoatomic cation transmembrane transporter activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); cellular response to acidic pH (ortholog); detection of chemical stimulus involved in sensory perception of sour taste (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cation channel complex (ortholog); cell surface (ortholog); plasma membrane (ortholog) 17 29334718 29394536 + 22301074;30032202 116886055 MODEL JAAIVD010000011;XM_032887359 XP_032743250 polycystic kidney disease protein 1-like 3 protein-coding 625876194 LOC116911562 ferritin light chain 1-like 10 8718001 8721690 - 116911562 MODEL JAAIVD010000005 pseudo 625876195 LOC116888444 ralBP1-associated Eps domain-containing protein 2-like X 22306840 22342871 + 116888444 MODEL JAAIVD010000014;XM_032889719 XP_032745610 protein-coding 625876203 LOC116894569 vomeronasal type-1 receptor 4-like 2 178757205 178758146 - 22301074;30032202 116894569 MODEL JAAIVD010000001;XM_032896285 XP_032752176 protein-coding 625876207 Slc35a2 solute carrier family 35 member A2 ENCODES a protein that exhibits UDP-galactose transmembrane transporter activity (ortholog); INVOLVED IN UDP-galactose transmembrane transport (ortholog); ASSOCIATED WITH autistic disorder (ortholog); congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation type IIm (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) X 14240643 14250440 - 22301074;30032202 116888462 MODEL JAAIVD010000014;XM_032889741;XR_004386312 XP_032745632 UDP-galactose translocator protein-coding 625876219 KEG97_t10 tRNA-Cys MT 5179 5246 - 64988243 trna 625876220 LOC116900446 olfactory receptor 4C15-like 5 70939759 70940697 - 22301074 116900446 MODEL JAAIVD010000023;XM_032902187 XP_032758078 protein-coding 625876224 Celsr3 cadherin EGF LAG seven-pass G-type receptor 3 INVOLVED IN axonal fasciculation (ortholog); cilium assembly (ortholog); dopaminergic neuron axon guidance (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); CAKUT1 (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog); presynaptic active zone membrane (ortholog) 8 100157973 100184768 + 22301074 116907622 MODEL JAAIVD010000027;XM_032910678;XM_032910679 XP_032766569;XP_032766570 protein-coding 625876265 LOC116897069 succinyl-CoA:3-ketoacid coenzyme A transferase 2A, mitochondrial-like 1 35137553 35139546 - 22301074;30032202 116897069 MODEL JAAIVD010000025;XM_032898697 XP_032754588 protein-coding 625876270 LOC116901068 zinc finger protein 431-like 5 142551485 142596256 - 22301074 116901068 MODEL JAAIVD010000023;XM_032902638 XP_032758529 protein-coding 625876275 LOC116900393 olfactory receptor 5D13-like 5 69814319 69815266 + 22301074;30032202 116900393 MODEL JAAIVD010000023;XM_032902138 XP_032758029 protein-coding 625876278 LOC116889040 protein FAM104A-like X 20111774 20138958 - 116889040 MODEL JAAIVD010000014 pseudo 625876279 Myf5 myogenic factor 5 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN camera-type eye development (ortholog); cartilage condensation (ortholog); embryonic skeletal system morphogenesis (ortholog); ASSOCIATED WITH OPHTHALMOPLEGIA, EXTERNAL, WITH RIB AND VERTEBRAL ANOMALIES (ortholog); scoliosis (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 1 185758506 185761691 - 22301074;30032202 116890007 MODEL JAAIVD010000025;XM_032890792 XP_032746683 protein-coding 625876286 Trnan-guu transfer RNA asparagine (anticodon GUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60834939 60835012 + 116897665 MODEL JAAIVD010000012 trna 625876287 LOC116894874 U6 spliceosomal RNA 2 168237174 168237283 + 116894874 MODEL JAAIVD010000001;XR_004387086 snrna 625876290 LOC116885419 CD209 antigen-like protein B 16 1768294 1776779 - 116885419 MODEL JAAIVD010000004;XM_032886706 XP_032742597 protein-coding 625876302 LOC116910741 small nucleolar RNA SNORD124 9 55725053 55725156 + 116910741 MODEL JAAIVD010000002;XR_004389254 snorna 625876305 LOC116888855 uncharacterized LOC116888855 X 97845090 97951002 + 116888855 MODEL JAAIVD010000014;XR_004386346 ncrna 625876311 Tnfsf11 TNF superfamily member 11 ENCODES a protein that exhibits cytokine activity (ortholog); identical protein binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); bone development (ortholog); bone resorption (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; ASSOCIATED WITH Alveolar Bone Loss (ortholog); autosomal recessive osteopetrosis 2 (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog) 12 46102801 46132348 + 22301074 116913970 MODEL JAAIVD010000007;XM_032918238;XM_032918239 XP_032774129;XP_032774130 tumor necrosis factor ligand superfamily member 11 protein-coding 625876321 LOC116902813 vomeronasal type-1 receptor 100-like 6 83949474 83950373 - 22301074;30032202 116902813 MODEL JAAIVD010000024;XM_032905145 XP_032761036 protein-coding 625876324 Macrod2 mono-ADP ribosylhydrolase 2 ENCODES a protein that exhibits ADP-ribosylglutamate hydrolase activity (ortholog); deacetylase activity (ortholog); hydrolase activity, acting on glycosyl bonds (ortholog); INVOLVED IN brain development (ortholog); DNA damage response (ortholog); peptidyl-glutamate ADP-deribosylation (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Liver Neoplasms (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 5 119664165 121873709 + 30032202 116901013 MODEL JAAIVD010000023;XM_032902613 XP_032758504 ADP-ribose glycohydrolase MACROD2 protein-coding 625876348 LOC116883606 isopentenyl-diphosphate delta-isomerase 2-like 14 12533 14969 - 22301074;30032202 116883606 MODEL JAAIVD010000009;XM_032884791 XP_032740682 protein-coding 625876354 Stk32c serine/threonine kinase 32C 2 62660909 62741288 + 22301074;30032202 116891365 MODEL JAAIVD010000001;XM_032892362 XP_032748253 serine/threonine-protein kinase 32C protein-coding 625876370 Svopl SVOP like ASSOCIATED WITH Hydrops Fetalis (ortholog) 6 101769788 101818947 + 22301074 116904414 MODEL JAAIVD010000024;XM_032907259 XP_032763150 putative transporter SVOPL protein-coding 625876387 Ranbp2 RAN binding protein 2 ENCODES a protein that exhibits kinase activator activity (ortholog); peptidyl-prolyl cis-trans isomerase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN centrosome localization (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); NLS-bearing protein import into nucleus (ortholog); PARTICIPATES IN CRM1 export pathway; mitochondria transport pathway; ASSOCIATED WITH ENCEPHALOPATHY, ACUTE, INFECTION-INDUCED, 3 (ortholog); genetic disease (ortholog); glucose metabolism disease (ortholog); FOUND IN annulate lamellae (ortholog); cytoplasmic periphery of the nuclear pore complex (ortholog); nuclear envelope (ortholog) 18 24602895 24652758 + 22301074;30032202 116886908 MODEL JAAIVD010000013;XM_032888374 XP_032744265 E3 SUMO-protein ligase RanBP2 protein-coding 625876420 LOC116907169 40S ribosomal protein S27-like 8 110883320 110885848 + 22301074;30032202 116907169 MODEL JAAIVD010000027;XM_032910124 XP_032766015 protein-coding 625876424 LOC116907256 uncharacterized LOC116907256 8 92550139 92554109 + 116907256 MODEL JAAIVD010000027;XR_004388816 ncrna 625876429 LOC116909904 tryptase beta-2 9 2629650 2631431 + 22301074 116909904 MODEL JAAIVD010000002;XM_032913655 XP_032769546 protein-coding 625876439 LOC116895918 TD and POZ domain-containing protein 2-like 3 120914225 120915348 - 30032202 116895918 MODEL JAAIVD010000012;XM_032896993 XP_032752884 protein-coding 625876443 Odf1 outer dense fiber of sperm tails 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); FOUND IN manchette (ortholog); outer dense fiber (ortholog); sperm flagellum (ortholog) 1 211676419 211684023 + 30032202 116910777 MODEL JAAIVD010000025;XM_032914588 XP_032770479 outer dense fiber protein 1 protein-coding 625876448 Rlig1 RNA 5'-phosphate and 3'-OH ligase 1 ENCODES a protein that exhibits RNA ligase (ATP) activity (ortholog); INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); response to reactive oxygen species (ortholog); ASSOCIATED WITH Joubert syndrome 1 (ortholog) 1 178907093 178918637 - 22301074;30032202 116908594 MODEL JAAIVD010000025;XM_032911818;XM_032911825;XM_032911832 XP_032767709;XP_032767716;XP_032767723 C1H12orf29 chromosome 1 C12orf29 homolog;uncharacterized protein C12orf29 homolog protein-coding 625876467 LOC116889540 small nucleolar RNA SNORA26 X 15692478 15692601 - 116889540 MODEL JAAIVD010000014;XR_004386475 snorna 625876470 Bpifb4 BPI fold containing family B member 4 FOUND IN cytosol (ortholog) 5 133273375 133298673 + 1915264;22301074 116900713 MODEL JAAIVD010000023;X60660;XM_032902419 CAA43067;XP_032758310 RY2G5 BPI fold-containing family B member 4;potential ligand-binding protein protein-coding 625876489 Tra2a transformer 2 alpha homolog ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); positive regulation of mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); skin disease (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 6 91716404 91734510 + 22301074;30032202 116903835 MODEL JAAIVD010000024;XM_032906546;XM_032906547;XM_032906548;XM_032906549;XM_032906551;XM_032906552 XP_032762437;XP_032762438;XP_032762439;XP_032762440;XP_032762442;XP_032762443 transformer-2 protein homolog alpha protein-coding 625876516 Ptch1 patched 1 ENCODES a protein that exhibits cholesterol binding (ortholog); cyclin binding (ortholog); hedgehog family protein binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); brain development (ortholog); branching involved in ureteric bud morphogenesis (ortholog); PARTICIPATES IN glypican signaling pathway; Hedgehog signaling pathway; ASSOCIATED WITH Aberrant Crypt Foci (ortholog); anterior segment dysgenesis 5 (ortholog); Axenfeld-Rieger syndrome (ortholog); FOUND IN apical part of cell (ortholog); axonal growth cone (ortholog); caveola (ortholog) 14 75965435 76029418 + 22301074;30032202 116883163 MODEL JAAIVD010000009;XM_032884188;XM_032884189;XM_032884190;XM_032884192 XP_032740079;XP_032740080;XP_032740081;XP_032740083 protein patched homolog 1 protein-coding 625876553 Parvb parvin beta INVOLVED IN actin cytoskeleton organization (ortholog); establishment or maintenance of cell polarity regulating cell shape (ortholog); lamellipodium assembly (ortholog); PARTICIPATES IN integrin mediated signaling pathway; FOUND IN actin cytoskeleton (ortholog); focal adhesion (ortholog); lamellipodium (ortholog) 1 253623124 253705085 + 22301074;30032202 116914529 MODEL JAAIVD010000025;XM_032918861 XP_032774752 beta-parvin protein-coding 625876570 LOC116898111 protein phosphatase 1 regulatory subunit 14B-like 4 100470283 100471915 - 22301074;30032202 116898111 MODEL JAAIVD010000003;XM_032899496 XP_032755387 protein-coding 625876575 Lin28a lin-28 RNA binding posttranscriptional regulator A ENCODES a protein that exhibits G-quadruplex RNA binding (ortholog); miRNA binding (ortholog); mRNA binding (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); germ cell development (ortholog); miRNA catabolic process (ortholog); ASSOCIATED WITH disease of cellular proliferation (ortholog); Neoplasm Invasiveness (ortholog); Neoplastic Cell Transformation (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) 1 24222209 24235392 + 22301074 116886809 MODEL JAAIVD010000025;XM_032888240 XP_032744131 lin-28 homolog A;protein lin-28 homolog A protein-coding 625876583 LOC116887949 zinc finger protein 532-like X 63596704 63603237 + 116887949 MODEL JAAIVD010000014 pseudo 625876584 LOC116900086 eukaryotic translation initiation factor 4E-like 5 11292260 11292921 - 116900086 MODEL JAAIVD010000023 pseudo 625876585 LOC116914345 40S ribosomal protein S17-like 13 52951679 52974109 - 116914345 MODEL JAAIVD010000008 pseudo 625876586 Map2 microtubule associated protein 2 ENCODES a protein that exhibits actin binding (ortholog); dystroglycan binding (ortholog); protein kinase binding (ortholog); INVOLVED IN axonogenesis (ortholog); central nervous system neuron development (ortholog); dendrite development (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); arteriovenous malformation (ortholog); asphyxia neonatorum (ortholog); FOUND IN actin cytoskeleton (ortholog); apical dendrite (ortholog); apical distal dendrite (ortholog) 4 140382053 140640979 - 30032202 116899471 Q63724 MODEL JAAIVD010000003;X53455;XM_032901293 CAA37535;XP_032757184 microtubule-associated protein 2 protein-coding 625876605 LOC116904710 small nucleolar RNA SNORA17 6 72253129 72253260 - 116904710 MODEL JAAIVD010000024;XR_004388405 snorna 625876608 Znf326 zinc finger protein 326 ENCODES a protein that exhibits RNA polymerase II complex binding (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); regulation of DNA-templated transcription elongation (ortholog); regulation of RNA splicing (ortholog); FOUND IN DBIRD complex (ortholog) 11 15583784 15622845 + 22301074;30032202 116912682 MODEL JAAIVD010000006;XM_032916819 XP_032772710 DBIRD complex subunit ZNF326 protein-coding 625876625 Sag S-antigen visual arrestin ENCODES a protein that exhibits opsin binding (ortholog); phosphoprotein binding (ortholog); spectrin binding (ortholog); PARTICIPATES IN altered visual phototransduction pathway; retinitis pigmentosa pathway; visual phototransduction pathway; ASSOCIATED WITH cone dystrophy (ortholog); congenital stationary night blindness (ortholog); fundus dystrophy (ortholog); FOUND IN photoreceptor inner segment (ortholog); photoreceptor outer segment (ortholog) 4 159919549 159957850 + 22301074;30032202 116899612 MODEL JAAIVD010000003;XM_032901571 XP_032757462 S-arrestin protein-coding 625876644 LOC116886650 histone H3.3A-like 17 22562548 22574611 - 116886650 MODEL JAAIVD010000011 pseudo 625876645 LOC116900574 transcriptional repressor NF-X1-like 1 117152272 117162932 - 30032202 116900574 MODEL JAAIVD010000025;XM_032902324 XP_032758215 protein-coding 625876655 LOC116902804 putative vomeronasal receptor-like protein 4 6 83728924 83729862 - 116902804 MODEL JAAIVD010000024 pseudo 625876656 Elavl1 ELAV like RNA binding protein 1 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); lncRNA binding (ortholog); miRNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); cell population proliferation (ortholog); lncRNA-mediated post-transcriptional gene silencing (ortholog); PARTICIPATES IN CRM1 export pathway; ASSOCIATED WITH degenerative disc disease (ortholog); endometriosis (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytoplasmic vesicle (ortholog) 16 2420527 2464406 - 22301074 116885940 MODEL JAAIVD010000004;XM_032887253 XP_032743144 ELAV-like protein 1 protein-coding 625876666 LOC116897411 U6 spliceosomal RNA 3 74193725 74193831 - 116897411 MODEL JAAIVD010000012;XR_004387453 snrna 625876669 Bdkrb2 bradykinin receptor B2 ENCODES a protein that exhibits beta-2 adrenergic receptor binding (ortholog); bradykinin receptor activity (ortholog); protease binding (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); arachidonate secretion (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphai family; G protein mediated signaling pathway via Galphaq family; kallikrein-kinin cascade pathway; ASSOCIATED WITH acute kidney failure (ortholog); Animal Disease Models (ortholog); asthma (ortholog); FOUND IN endosome (ortholog); plasma membrane (ortholog) 7 123225047 123254809 + 22301074;30032202 116905891 MODEL JAAIVD010000026;XM_032908877;XM_032908879 XP_032764768;XP_032764770 B2 bradykinin receptor protein-coding 625876680 Smim3 small integral membrane protein 3 ENCODES a protein that exhibits identical protein binding (ortholog) 15 71466608 71467983 + 116884742 MODEL JAAIVD010000010;XM_032885960 XP_032741851 protein-coding 625876685 LOC116913699 olfactory receptor 11G2-like 12 72727451 72728419 - 22301074 116913699 MODEL JAAIVD010000007;XM_032917995 XP_032773886 protein-coding 625876689 LOC116886737 small nucleolar RNA SNORA17 17 22314059 22314186 - 116886737 MODEL JAAIVD010000011;XR_004386145 snorna 625876692 Flnc filamin C ENCODES a protein that exhibits ankyrin binding (ortholog); cytoskeletal protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN muscle cell development (ortholog); sarcomere organization (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); cardiomyopathy (ortholog); cardiovascular system disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); sarcolemma (ortholog) 6 110105242 110132893 - 30032202 116904017 MODEL JAAIVD010000024;XM_032906837 XP_032762728 filamin-C protein-coding 625876743 Ms4a12 membrane spanning 4-domains A12 2 10693802 10705633 - 30032202 116890979 MODEL JAAIVD010000001;XM_032891645;XM_032891646 XP_032747536;XP_032747537 membrane-spanning 4-domains subfamily A member 12 protein-coding 625876757 LOC116898372 histone deacetylase 1-like 4 63813725 63835079 - 116898372 MODEL JAAIVD010000003 pseudo 625876758 Igsf6 immunoglobulin superfamily member 6 ASSOCIATED WITH allergic contact dermatitis (ortholog); Experimental Liver Cirrhosis (ortholog) 2 80722547 80733670 + 116891573 MODEL JAAIVD010000001;XM_032892753 XP_032748644 protein-coding 625876768 LOC116910635 U6 spliceosomal RNA 9 68498803 68498912 - 116910635 MODEL JAAIVD010000002;XR_004389173 snrna 625876771 Phc1 polyhomeotic homolog 1 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); cellular response to retinoic acid (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH dilated cardiomyopathy (ortholog); Germ Cell and Embryonal Neoplasms (ortholog); intellectual disability (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 6 24767731 24790120 + 22301074;30032202 116903312 MODEL JAAIVD010000024;XM_032905741;XM_032905742;XM_032905743;XM_032905744;XM_032905746 XP_032761632;XP_032761633;XP_032761634;XP_032761635;XP_032761637 polyhomeotic-like protein 1 protein-coding 625876802 LOC116887051 CD99 antigen-like 18 49355163 49358983 + 30032202 116887051 MODEL JAAIVD010000013;XM_032888542 XP_032744433 protein-coding 625876813 LOC116913230 signal peptidase complex subunit 1-like 12 71474318 71477306 - 116913230 MODEL JAAIVD010000007 pseudo 625876814 Zbtb43 zinc finger and BTB domain containing 43 ENCODES a protein that exhibits RNA polymerase III general transcription initiation factor binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); ASSOCIATED WITH COVID-19 (ortholog) 5 2176304 2191932 + 22301074;30032202 116901119 MODEL JAAIVD010000023;XM_032902693;XM_032902694;XM_032902695 XP_032758584;XP_032758585;XP_032758586 zinc finger and BTB domain-containing protein 43 protein-coding 625876826 Acsl4 acyl-CoA synthetase long chain family member 4 ENCODES a protein that exhibits arachidonate-CoA ligase activity (ortholog); long-chain fatty acid-CoA ligase activity (ortholog); very long-chain fatty acid-CoA ligase activity (ortholog); INVOLVED IN dendritic spine development (ortholog); embryonic process involved in female pregnancy (ortholog); fatty acid biosynthetic process (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH Animal Disease Models (ortholog); autism spectrum disorder (ortholog); depressive disorder (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); lipid droplet (ortholog) X 94428295 94491757 - 30032202 116889314 MODEL JAAIVD010000014;XM_032890436;XM_032890437;XM_032890438;XM_032890439;XM_032890440 XP_032746327;XP_032746328;XP_032746329;XP_032746330;XP_032746331 long-chain-fatty-acid--CoA ligase 4 protein-coding 625876855 LOC116894224 trace amine-associated receptor 7h 2 106822906 106823982 - 22301074;30032202 116894224 MODEL JAAIVD010000001;XM_032895935 XP_032751826 protein-coding 625876858 LOC116899820 small nucleolar RNA SNORA13 4 5112514 5112648 + 116899820 MODEL JAAIVD010000003;XR_004387820 snorna 625876861 LOC116910732 small Cajal body-specific RNA 21 9 48960427 48960566 - 116910732 MODEL JAAIVD010000002;XR_004389250 ncrna 625876864 LOC116889303 histone H3.3A-like X 33245080 33245490 + 116889303 MODEL JAAIVD010000014 pseudo 625876865 C7H3orf38 chromosome 7 C3orf38 homolog INVOLVED IN positive regulation of apoptotic process (ortholog); FOUND IN nucleus (ortholog) 7 109663351 109668143 + 116905341 MODEL JAAIVD010000026;XM_032908239 XP_032764130 uncharacterized protein C3orf38 homolog protein-coding 625876872 LOC116911255 low affinity immunoglobulin gamma Fc region receptor II 10 50141612 50156055 - 30032202 116911255 MODEL JAAIVD010000005;XM_032915155;XM_032915156 XP_032771046;XP_032771047 protein-coding 625876885 LOC116898659 protein DGCR6 4 3322996 3328069 + 116898659 MODEL JAAIVD010000003;XM_032899893;XM_032899894 XP_032755784;XP_032755785 protein-coding 625876896 Myt1l myelin transcription factor 1 like ENCODES a protein that exhibits cobalt ion binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); nervous system development (ortholog); neuron development (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); autosomal dominant intellectual developmental disorder 39 (ortholog); FOUND IN nucleus (ortholog) 7 43067788 43359030 + 22301074;30032202 116904936 MODEL JAAIVD010000026;XM_032907568;XM_032907569;XM_032907570;XM_032907571;XM_032907572;XM_032907573;XM_032907574;XM_032907575;XM_032907576;XM_032907577 XP_032763459;XP_032763460;XP_032763461;XP_032763462;XP_032763463;XP_032763464;XP_032763465;XP_032763466;XP_032763467;XP_032763468 myelin transcription factor 1-like protein protein-coding 625876942 Prex1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 ENCODES a protein that exhibits phospholipid binding (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); neutrophil chemotaxis (ortholog); positive regulation of cell adhesion (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Lymphatic Metastasis (ortholog); prostate cancer (ortholog); FOUND IN cytosol (ortholog); dendritic shaft (ortholog); growth cone (ortholog) 5 151249232 151400100 + 22301074 116902325 MODEL JAAIVD010000023;XM_032904775 XP_032760666 phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein protein-coding 625876986 LOC116897013 uncharacterized LOC116897013 3 136988574 136995411 + 116897013 MODEL JAAIVD010000012;XR_004387389 ncrna 625876990 LOC116894440 major allergen I polypeptide chain 1-like 2 164593402 164594703 - 30032202 116894440 MODEL JAAIVD010000001;XM_032896143 XP_032752034 protein-coding 625876997 LOC116885354 putative fidgetin-like protein 2 16 3215332 3217081 + 116885354 MODEL JAAIVD010000004 pseudo 625876998 Gpr161 G protein-coupled receptor 161 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); signaling adaptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cerebellum development (ortholog); forebrain development (ortholog); ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); medulloblastoma (ortholog); Pituitary Stalk Interruption Syndrome (ortholog); FOUND IN cilium (ortholog); non-motile cilium membrane (ortholog); recycling endosome (ortholog) 10 44427179 44468895 + 22301074;30032202 116911220 MODEL JAAIVD010000005;XM_032915113;XM_032915114;XM_032915115 XP_032771004;XP_032771005;XP_032771006 G-protein coupled receptor 161 protein-coding 625877014 Obi1 ORC ubiquitin ligase 1 ENCODES a protein that exhibits chromatin binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN positive regulation of mRNA splicing, via spliceosome (ortholog); protein autoubiquitination (ortholog); protein monoubiquitination (ortholog); FOUND IN chromatin (ortholog) 12 20292880 20329880 + 30032202 116913603 MODEL JAAIVD010000007;XM_032917853 XP_032773744 protein-coding 625877024 LOC116910194 transcription initiation factor TFIID subunit 11-like 9 81828165 81830032 + 22301074;30032202 116910194 MODEL JAAIVD010000002;XM_032914056 XP_032769947 protein-coding 625877029 LOC116908268 solute carrier family 5 member 4A-like 8 107066700 107164323 + 22301074;30032202 116908268 MODEL JAAIVD010000027;XM_032911517 XP_032767408 protein-coding 625877040 Rims1 regulating synaptic membrane exocytosis 1 ENCODES a protein that exhibits protein kinase binding (ortholog); SH3 domain binding (ortholog); small GTPase binding (ortholog); INVOLVED IN acrosomal vesicle exocytosis (ortholog); calcium ion-regulated exocytosis of neurotransmitter (ortholog); long-term synaptic potentiation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); bipolar disorder (ortholog); FOUND IN extrinsic component of presynaptic active zone membrane (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) 4 99593141 100090913 - 22301074;30032202 116899251 MODEL JAAIVD010000003;XM_032900856 XP_032756747 regulating synaptic membrane exocytosis protein 1 protein-coding 625877078 LOC116908389 small nucleolar RNA SNORA48 8 48015486 48015626 + 116908389 MODEL JAAIVD010000027;XR_004388934 snorna 625877081 Galnt2 polypeptide N-acetylgalactosaminyltransferase 2 ENCODES a protein that exhibits manganese ion binding (ortholog); polypeptide N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN positive regulation of immunoglobulin production (ortholog); protein maturation (ortholog); protein O-linked glycosylation (ortholog); ASSOCIATED WITH congenital disorder of glycosylation type IIt (ortholog); COVID-19 (ortholog); genetic disease (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi stack (ortholog); perinuclear region of cytoplasm (ortholog) 17 43767450 43879881 + 30032202 116886086 MODEL JAAIVD010000011;XM_032887406 XP_032743297 protein-coding 625877101 Fsaf1 40S small subunit processome assembly factor 1 INVOLVED IN ribosomal small subunit biogenesis (ortholog); FOUND IN chromosome (ortholog); small-subunit processome (ortholog) 17 44362077 44375325 - 116886027 MODEL JAAIVD010000011;XM_032887319 XP_032743210 C17H1orf131 chromosome 17 C1orf131 homolog;uncharacterized protein C1orf131 homolog protein-coding 625877112 LOC116914247 uncharacterized LOC116914247 13 64897672 64900166 + 116914247 MODEL JAAIVD010000008;XR_004389738 ncrna 625877118 LOC116908493 uncharacterized LOC116908493 9 83204996 83207271 - 116908493 MODEL JAAIVD010000002;XR_004388988 ncrna 625877123 Sox11 SRY-box transcription factor 11 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN closure of optic fissure (ortholog); cornea development in camera-type eye (ortholog); embryonic digestive tract morphogenesis (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Coffin-Siris syndrome (ortholog); Coffin-Siris syndrome 9 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 7 40872669 40881013 - 30032202 116904925 MODEL JAAIVD010000026;XM_032907554 XP_032763445 transcription factor SOX-11 protein-coding 625877128 LOC116911929 sentrin-specific protease 2-like 11 46347777 46349204 + 30032202 116911929 MODEL JAAIVD010000006;XM_032915820 XP_032771711 protein-coding 625877131 Samd9l sterile alpha motif domain containing 9 like INVOLVED IN common myeloid progenitor cell proliferation (ortholog); endosomal vesicle fusion (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); microcephaly (ortholog); FOUND IN early endosome (ortholog); mitochondrion (ortholog) 6 135197616 135207009 + 22301074;30032202 116904108 MODEL JAAIVD010000024;XM_032906984 XP_032762875 sterile alpha motif domain-containing protein 9-like protein-coding 625877137 LOC116894765 cytochrome c, somatic-like 2 198672232 198672588 + 22301074;30032202 116894765 MODEL JAAIVD010000001;XM_032896427 XP_032752318 protein-coding 625877140 LOC116899020 keratin-associated protein 13-1-like 4 55111183 55111781 - 116899020 MODEL JAAIVD010000003;XM_032900468 XP_032756359 protein-coding 625877145 LOC116908271 40S ribosomal protein S15-like 8 111726448 111726882 - 116908271 MODEL JAAIVD010000027 pseudo 625877146 LOC116897846 ferritin light chain 1-like 4 15003092 15003661 - 116897846 MODEL JAAIVD010000003 pseudo 625877147 Trim50 tripartite motif containing 50 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN regulation of establishment of protein localization (ortholog); FOUND IN aggresome (ortholog) 16 18642567 18659498 - 22301074 116885617 MODEL JAAIVD010000004;XM_032886916;XM_032886917 XP_032742807;XP_032742808 E3 ubiquitin-protein ligase TRIM50 protein-coding 625877163 LOC116901540 tetratricopeptide repeat protein 30B 5 53285503 53288257 - 22301074;30032202 116901540 MODEL JAAIVD010000023;XM_032903524 XP_032759415 protein-coding 625877168 Cntfr ciliary neurotrophic factor receptor ENCODES a protein that exhibits ciliary neurotrophic factor receptor activity (ortholog); cytokine activity (ortholog); cytokine binding (ortholog); INVOLVED IN brainstem development (ortholog); ciliary neurotrophic factor-mediated signaling pathway (ortholog); cytokine-mediated signaling pathway (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN apical plasma membrane (ortholog); ciliary neurotrophic factor receptor complex (ortholog); CNTFR-CLCF1 complex (ortholog) 1 3867675 3893847 + 22301074;30032202 116891327 MODEL JAAIVD010000025;XM_032892260 XP_032748151 ciliary neurotrophic factor receptor subunit alpha protein-coding 625877181 Trnal-aag transfer RNA leucine (anticodon AAG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 31457175 31457256 - 116910830 MODEL JAAIVD010000002 trna 625877182 LOC116912117 uncharacterized LOC116912117 11 96758958 96789941 - 116912117 MODEL JAAIVD010000006;XR_004389424;XR_004389425 ncrna 625877191 Nkiras2 NFKB inhibitor interacting Ras like 2 ENCODES a protein that exhibits GTPase activating protein binding (ortholog); INVOLVED IN inflammatory response (ortholog); lung alveolus development (ortholog); Ral protein signal transduction (ortholog); ASSOCIATED WITH COVID-19 (ortholog) 9 59922553 59926699 + 22301074;30032202 116909422 MODEL JAAIVD010000002;XM_032912997 XP_032768888 NF-kappa-B inhibitor-interacting Ras-like protein 2 protein-coding 625877199 LOC116898563 odorant receptor 131-2-like 4 157669196 157670086 + 22301074 116898563 MODEL JAAIVD010000003;XM_032899770 XP_032755661 protein-coding 625877202 LOC116884939 elongation factor 2-like 15 22216612 22257617 + 116884939 MODEL JAAIVD010000010 pseudo 625877203 LOC116913786 eosinophil cationic protein-like 12 72048819 72049678 + 22301074;30032202 116913786 MODEL JAAIVD010000007;XM_032918092 XP_032773983 protein-coding 625877209 Sri sorcin ENCODES a protein that exhibits calcium ion binding (ortholog); DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN calcium ion transport (ortholog); heart development (ortholog); negative regulation of cardiac muscle contraction (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); congestive heart failure (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); chromaffin granule membrane (ortholog) 6 140049228 140060012 + 22301074 116904136 MODEL JAAIVD010000024;XM_032907026 XP_032762917 protein-coding 625877219 Septin12 septin 12 ENCODES a protein that exhibits GTP binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); septin ring assembly (ortholog); spermatid development (ortholog); ASSOCIATED WITH spermatogenic failure 10 (ortholog); FOUND IN acrosomal vesicle (ortholog); microtubule cytoskeleton (ortholog); midbody (ortholog) 9 16908290 16918494 + 22301074;30032202 116909187 MODEL JAAIVD010000002;XM_032912678;XM_032912679 XP_032768569;XP_032768570 septin-12 protein-coding 625877236 Itgb4 integrin subunit beta 4 ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); insulin-like growth factor I binding (ortholog); neuregulin binding (ortholog); INVOLVED IN autophagy (ortholog); cell adhesion (ortholog); cell motility (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Congenital Myopathy with Neuropathy and Deafness (ortholog); ectodermal dysplasia (ortholog); FOUND IN basal plasma membrane (ortholog); basement membrane (ortholog); cell cortex (ortholog) 9 68051638 68087645 - 22301074;30032202 116908739 MODEL JAAIVD010000002;XM_032912086 XP_032767977 integrin beta-4 protein-coding 625877280 LOC116894145 olfactory receptor 2AG1-like 2 104153187 104154137 + 22301074 116894145 MODEL JAAIVD010000001;XM_032895862 XP_032751753 protein-coding 625877283 Tsc2 TSC complex subunit 2 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); GTPase activator activity (ortholog); Hsp90 protein binding (ortholog); INVOLVED IN anoikis (ortholog); cellular response to insulin stimulus (ortholog); cellular response to starvation (ortholog); PARTICIPATES IN mitogen activated protein kinase signaling pathway; mTOR signaling pathway; the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH Acute Hepatitis (ortholog); acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); FOUND IN caveola (ortholog); cell projection (ortholog); cytoplasm (ortholog) 9 1879761 1914129 - 22301074;30032202 116909159 MODEL JAAIVD010000002;XM_032912646 XP_032768537 tuberin protein-coding 625877329 LOC116896554 histone-lysine N-methyltransferase SETDB1-like 3 61832789 61838098 - 30032202 116896554 MODEL JAAIVD010000012;XM_032897745;XM_032897746 XP_032753636;XP_032753637 protein-coding 625877345 LOC116894026 putative olfactory receptor 52P1 2 102024408 102025361 + 22301074 116894026 MODEL JAAIVD010000001;XM_032895742 XP_032751633 protein-coding 625877348 LOC116893324 uncharacterized LOC116893324 2 154089388 154091308 - 116893324 MODEL JAAIVD010000001;XM_032895142 XP_032751033 uncharacterized protein LOC116893324 protein-coding 625877355 Itga6 integrin subunit alpha 6 ENCODES a protein that exhibits insulin-like growth factor I binding (ortholog); integrin binding (ortholog); laminin binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); cell adhesion mediated by integrin (ortholog); cell-cell adhesion (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH epidermolysis bullosa (ortholog); genetic disease (ortholog); junctional epidermolysis bullosa (ortholog); FOUND IN adherens junction (ortholog); basal part of cell (ortholog); basal plasma membrane (ortholog) 5 49081813 49154347 + 22301074;30032202 116901509 MODEL JAAIVD010000023;XM_032903479;XM_032903480 XP_032759370;XP_032759371 integrin alpha-6 protein-coding 625877387 Trnal-caa transfer RNA leucine (anticodon CAA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41358377 41358482 - 116884152 MODEL JAAIVD010000009 trna 625877388 LOC116900593 H/ACA ribonucleoprotein complex subunit 3-like 5 60785833 60786978 + 22301074;30032202 116900593 MODEL JAAIVD010000023;XM_032902309 XP_032758200 protein-coding 625877393 Tmem61 transmembrane protein 61 1 48315011 48320634 + 116890933 MODEL JAAIVD010000025;XM_032891615 XP_032747506 protein-coding 625877398 LOC116902780 putative vomeronasal receptor-like protein 4 6 76377697 76378554 - 22301074;30032202 116902780 MODEL JAAIVD010000024;XM_032905122 XP_032761013 protein-coding 625877401 Zic4 Zic family zinc finger 4 ENCODES a protein that exhibits DNA binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); ASSOCIATED WITH Dandy-Walker syndrome (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleus (ortholog) 8 83108373 83129837 + 30032202 116906916 MODEL JAAIVD010000027;XM_032909836;XM_032909837;XM_032909838;XM_032909840;XM_032909841 XP_032765727;XP_032765728;XP_032765729;XP_032765731;XP_032765732 Zic family member 4;zinc finger protein ZIC 4 protein-coding 625877425 LOC116911571 glyceraldehyde-3-phosphate dehydrogenase-like 10 11735466 11736464 + 116911571 MODEL JAAIVD010000005 pseudo 625877426 LOC116885597 phosphoglycerate mutase 1-like 16 38355825 38356597 - 116885597 MODEL JAAIVD010000004 pseudo 625877427 Rnpepl1 arginyl aminopeptidase like 1 ENCODES a protein that exhibits metalloaminopeptidase activity (ortholog); INVOLVED IN proteolysis (ortholog) 4 164871106 164880657 + 22301074;30032202 116899649 MODEL JAAIVD010000003;XM_032901658 XP_032757549 aminopeptidase RNPEPL1 protein-coding 625877442 Dgat2l6 diacylglycerol O-acyltransferase 2 like 6 ENCODES a protein that exhibits diacylglycerol O-acyltransferase activity (ortholog); INVOLVED IN monoacylglycerol biosynthetic process (ortholog); ASSOCIATED WITH prostate cancer (ortholog) X 58273952 58297105 + 22301074;30032202 116889362 MODEL JAAIVD010000014;XM_032890469 XP_032746360 diacylglycerol O-acyltransferase 2-like protein 6 protein-coding 625877453 LOC116908266 translation initiation factor IF-2-like 8 101683087 101703718 - 116908266 MODEL JAAIVD010000027;XM_032911516 XP_032767407 protein-coding 625877459 LOC116894085 olfactory receptor 52A1-like 2 103215053 103216012 + 22301074 116894085 MODEL JAAIVD010000001;XM_032895806 XP_032751697 protein-coding 625877462 Gngt1 G protein subunit gamma transducin 1 INVOLVED IN cardiac muscle cell apoptotic process (ortholog); cellular response to hypoxia (ortholog); eye photoreceptor cell development (ortholog); PARTICIPATES IN visual phototransduction pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); prostate cancer (ortholog); FOUND IN heterotrimeric G-protein complex (ortholog); photoreceptor inner segment (ortholog); photoreceptor outer segment (ortholog) 6 134616316 134619416 - 22301074;30032202 116902983 MODEL JAAIVD010000024;XM_032905302 XP_032761193 guanine nucleotide-binding protein G(T) subunit gamma-T1 protein-coding 625877469 LOC116914163 U4 spliceosomal RNA 12 66637582 66637665 + 116914163 MODEL JAAIVD010000007 pseudo 625877470 LOC116906952 olfactory receptor 143-like 8 32084237 32085178 + 22301074;30032202 116906952 MODEL JAAIVD010000027;XM_032909873 XP_032765764 protein-coding 625877473 LOC116885909 leucine-rich repeat and WD repeat-containing protein 1-like 16 17877621 17887803 + 22301074;30032202 116885909 MODEL JAAIVD010000004;XM_032887225 XP_032743116 protein-coding 625877488 LOC116904980 alkylglycerol monooxygenase-like 7 50521821 50538795 + 30032202 116904980 MODEL JAAIVD010000026;XM_032907660 XP_032763551 protein-coding 625877495 Hnrnpll heterogeneous nuclear ribonucleoprotein L like ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN positive regulation of RNA splicing (ortholog); FOUND IN synapse (ortholog) 7 13010521 13041335 + 22301074;30032202 116905859 MODEL JAAIVD010000026;XM_032908841 XP_032764732 heterogeneous nuclear ribonucleoprotein L-like protein-coding 625877512 LOC116906915 zinc finger protein 883-like 1 157533789 157553282 - 30032202 116906915 MODEL JAAIVD010000025;XM_032909839 XP_032765730 protein-coding 625877520 Tedc1 tubulin epsilon and delta complex 1 INVOLVED IN cytoskeleton organization (ortholog); microtubule cytoskeleton organization (ortholog); positive regulation of smoothened signaling pathway (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); cilium (ortholog) 7 130759686 130766852 + 116905529 MODEL JAAIVD010000026;XM_032908566 XP_032764457 tubulin epsilon and delta complex protein 1 protein-coding 625877532 LOC116897894 zinc finger CCHC domain-containing protein 10-like 4 32512987 32513600 + 22301074 116897894 MODEL JAAIVD010000003;XM_032899299;XM_032899300 XP_032755190;XP_032755191 protein-coding 625877539 Pole3 DNA polymerase epsilon 3, accessory subunit INVOLVED IN chromatin remodeling (ortholog); DNA-templated DNA replication (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN ISWI family mediated chromatin remodeling pathway; nucleotide excision repair pathway; RNA polymerase II transcription initiation pathway; FOUND IN ATAC complex (ortholog); epsilon DNA polymerase complex (ortholog); pericentric heterochromatin (ortholog) 1 91008731 91012038 + 22301074;30032202 116901355 MODEL JAAIVD010000025;XM_032903208 XP_032759099 DNA polymerase epsilon subunit 3 protein-coding 625877547 Hddc3 HD domain containing 3 2 119902818 119904420 - 30032202 116891919 MODEL JAAIVD010000001;XM_032893344;XM_032893346 XP_032749235;XP_032749237 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1 protein-coding 625877558 Ttpa alpha tocopherol transfer protein ENCODES a protein that exhibits lipid transfer activity (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN embryonic placenta development (ortholog); intermembrane lipid transfer (ortholog); intracellular pH reduction (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); Animal Disease Models (ortholog); Ataxia (ortholog); FOUND IN late endosome (ortholog) 1 122998219 123019357 - 30032202 116903010 MODEL JAAIVD010000025;XM_032905324;XM_032905332 XP_032761215;XP_032761223 alpha-tocopherol transfer protein protein-coding 625877571 Nemp1 nuclear envelope integral membrane protein 1 INVOLVED IN erythrocyte enucleation (ortholog); erythrocyte maturation (ortholog); nuclear membrane organization (ortholog); FOUND IN nuclear envelope (ortholog) 1 206124303 206149091 + 30032202 116910210 MODEL JAAIVD010000025;XM_032914091;XM_032914104;XM_032914110;XR_004389143 XP_032769982;XP_032769995;XP_032770001 protein-coding 625877593 LOC116909049 small nuclear ribonucleoprotein G-like 9 42845686 42846316 + 116909049 MODEL JAAIVD010000002 pseudo 625877594 Zfp28 ZFP28 zinc finger protein 2 179729414 179741684 - 30032202 116892720 MODEL JAAIVD010000001;XM_032894587 XP_032750478 zinc finger protein 28 homolog protein-coding 625877605 Plk5 polo like kinase 5 (inactive) ENCODES a protein that exhibits kinase activity (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); defense response to tumor cell (ortholog); DNA damage response (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog) 1 154518338 154526122 - 22301074;30032202 116905118 MODEL JAAIVD010000025;XM_032907862;XM_032907870;XM_032907877;XM_032907887;XM_032907896;XR_004388492 XP_032763753;XP_032763761;XP_032763768;XP_032763778;XP_032763787 inactive serine/threonine-protein kinase PLK5 protein-coding 625877634 Sptbn1 spectrin beta, non-erythrocytic 1 ENCODES a protein that exhibits ankyrin binding (ortholog); GTPase binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); central nervous system development (ortholog); central nervous system formation (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Beckwith-Wiedemann syndrome (ortholog); Bone Fractures (ortholog); DEVELOPMENTAL DELAY, IMPAIRED SPEECH, AND BEHAVIORAL ABNORMALITIES (ortholog); FOUND IN axolemma (ortholog); cortical cytoskeleton (ortholog); cuticular plate (ortholog) 11 97674860 97847142 - 22301074;30032202 116912875 MODEL JAAIVD010000006;XM_032917109;XM_032917110;XM_032917111 XP_032773000;XP_032773001;XP_032773002 spectrin beta chain, non-erythrocytic 1 protein-coding 625877680 Csnk1g3 casein kinase 1 gamma 3 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN protein autophosphorylation (ortholog); protein phosphorylation (ortholog); PARTICIPATES IN Hedgehog signaling pathway; p53 signaling pathway 15 77824532 77911435 - 22301074;30032202 116884952 MODEL JAAIVD010000010;XM_032886156 XP_032742047 casein kinase I protein-coding 625877698 LOC116898785 cytochrome P450 4X1 1 41439285 41468387 + 22301074 116898785 MODEL JAAIVD010000025;XM_032900128 XP_032756019 protein-coding 625877714 LOC116885738 uncharacterized LOC116885738 16 15646362 15648886 - 116885738 MODEL JAAIVD010000004;XR_004386039 ncrna 625877719 LOC116894215 olfactory receptor 510 2 106578934 106579878 + 22301074;30032202 116894215 MODEL JAAIVD010000001;XM_032895928 XP_032751819 protein-coding 625877722 LOC116907288 phosphatidylinositol-glycan biosynthesis class X protein-like 8 17783168 17787055 + 116907288 MODEL JAAIVD010000027 pseudo 625877723 LOC116887827 nucleoside diphosphate kinase A-like X 36119079 36142560 + 116887827 MODEL JAAIVD010000014 pseudo 625877724 Polr2b RNA polymerase II subunit B ENCODES a protein that exhibits chromatin binding (ortholog); DNA-directed RNA polymerase activity (ortholog); RNA-directed RNA polymerase activity (ortholog); INVOLVED IN transcription by RNA polymerase II (ortholog); transcription elongation by RNA polymerase II (ortholog); transcription initiation at RNA polymerase II promoter (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH esophageal atresia/tracheoesophageal fistula (ortholog); FOUND IN chromosome, telomeric region (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 11 34068837 34106227 + 22301074;30032202 116912128 MODEL JAAIVD010000006;XM_032916037 XP_032771928 DNA-directed RNA polymerase II subunit RPB2 protein-coding 625877753 LOC116893365 androgen-binding protein homolog 2 164602606 164604385 + 22301074;30032202 116893365 MODEL JAAIVD010000001;XM_032895167 XP_032751058 protein-coding 625877758 LOC116912122 protein transport protein Sec61 subunit gamma-like 11 4865705 4866344 - 116912122 MODEL JAAIVD010000006 pseudo 625877759 Znf292 zinc finger protein 292 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal dominant intellectual developmental disorder (ortholog); autosomal dominant intellectual developmental disorder 64 (ortholog); FOUND IN nucleus (ortholog) 1 107910468 107987895 + 30032202 116902170 MODEL JAAIVD010000025;XM_032904517 XP_032760408 protein-coding 625877771 LOC116889143 ribosome biogenesis protein NSA2 homolog X 64130716 64131643 - 116889143 MODEL JAAIVD010000014 pseudo 625877772 LOC116910611 tubulin gamma-2 chain 9 60454125 60460068 + 22301074;30032202 116910611 MODEL JAAIVD010000002;XM_032914558 XP_032770449 protein-coding 625877786 Pag1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 ENCODES a protein that exhibits SH2 domain binding (ortholog); INVOLVED IN intracellular signal transduction (ortholog); negative regulation of T cell activation (ortholog); regulation of T cell activation (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); schizophrenia (ortholog); FOUND IN membrane raft (ortholog); plasma membrane (ortholog) 3 143779891 143865387 - 22301074;30032202 116897032 MODEL JAAIVD010000012;XM_032898649;XM_032898650 XP_032754540;XP_032754541 phosphoprotein associated with glycosphingolipid-enriched microdomains 1 protein-coding 625877799 LOC116885072 small nucleolar RNA SNORA76 15 76287558 76287693 + 116885072 MODEL JAAIVD010000010;XR_004385946 snorna 625877802 LOC116895038 small nucleolar RNA SNORA17 2 191041475 191041612 + 116895038 MODEL JAAIVD010000001;XR_004387224 snorna 625877805 Ptx4 pentraxin 4 9 2389221 2393575 + 116910561 MODEL JAAIVD010000002;XM_032914473;XM_032914475 XP_032770364;XP_032770366 pentraxin-4 protein-coding 625877812 LOC116907514 olfactory receptor 867-like 8 16032637 16033632 + 22301074;30032202 116907514 MODEL JAAIVD010000027;XM_032910516 XP_032766407 protein-coding 625877815 LOC116907442 olfactory receptor 143-like 8 31982798 31983754 + 22301074;30032202 116907442 MODEL JAAIVD010000027;XM_032910413 XP_032766304 protein-coding 625877819 Cnpy1 canopy FGF signaling regulator 1 6 157003874 157012574 - 30032202 116904235 MODEL JAAIVD010000024;XM_032907179 XP_032763070 protein canopy homolog 1 protein-coding 625877827 Fam168b family with sequence similarity 168 member B INVOLVED IN axonogenesis (ortholog); gene expression (ortholog); neurogenesis (ortholog); ASSOCIATED WITH myoepithelioma (ortholog); FOUND IN membrane (ortholog) 4 111022781 111055437 - 116899280 MODEL JAAIVD010000003;XM_032900912 XP_032756803 myelin-associated neurite-outgrowth inhibitor protein-coding 625877839 Slc12a9 solute carrier family 12 member 9 16 16698571 16716383 + 22301074;30032202 116885204 MODEL JAAIVD010000004;XM_032886436 XP_032742327 protein-coding 625877857 Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 ENCODES a protein that exhibits amyloid-beta binding (ortholog); D1 dopamine receptor binding (ortholog); heparan sulfate proteoglycan binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); blood circulation (ortholog); brain-derived neurotrophic factor receptor signaling pathway (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH alternating hemiplegia of childhood (ortholog); Alternating Hemiplegia of Childhood 2 (ortholog); autism spectrum disorder (ortholog); FOUND IN axolemma (ortholog); axon (ortholog); calyx of Held (ortholog) 2 169699584 169728408 + 22301074;30032202 116892473 MODEL JAAIVD010000001;XM_032894198 XP_032750089 sodium/potassium-transporting ATPase subunit alpha-3 protein-coding 625877884 LOC116906353 small nucleolar RNA SNORD113/SNORD114 family 7 127212206 127212286 + 116906353 MODEL JAAIVD010000026 pseudo 625877885 Cav2 caveolin 2 ENCODES a protein that exhibits D1 dopamine receptor binding (ortholog); heterotrimeric G-protein binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); INVOLVED IN basement membrane organization (ortholog); caveola assembly (ortholog); chemical synaptic transmission (ortholog); PARTICIPATES IN reverse cholesterol transport pathway; syndecan signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); Experimental Autoimmune Myocarditis (ortholog); high grade glioma (ortholog); FOUND IN acrosomal membrane (ortholog); caveola (ortholog); caveolar macromolecular signaling complex (ortholog) 6 121674749 121682372 - 22301074;30032202 116904062 MODEL JAAIVD010000024;XM_032906924 XP_032762815 caveolin-2 protein-coding 625877892 LOC116889718 probable GTP-binding protein EngB 22301074 116889718 MODEL JAAIVD010000061;XM_032890597 XP_032746488 protein-coding 625877893 LOC116898496 post-GPI attachment to proteins factor 2-like 4 122555919 122556445 - 116898496 MODEL JAAIVD010000003 pseudo 625877894 LOC116897245 uncharacterized LOC116897245 3 196483112 196489484 - 116897245 MODEL JAAIVD010000012;XR_004387405 ncrna 625877899 Zdhhc2 zDHHC palmitoyltransferase 2 ENCODES a protein that exhibits palmitoyltransferase activity (ortholog); protein homodimerization activity (ortholog); protein-cysteine S-myristoyltransferase activity (ortholog); INVOLVED IN peptidyl-L-cysteine S-palmitoylation (ortholog); positive regulation of AMPA glutamate receptor clustering (ortholog); positive regulation of endosome to plasma membrane protein transport (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Liver Neoplasms (ortholog); Weight Gain (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); glutamatergic synapse (ortholog) 13 46990896 47053866 - 30032202 116914265 MODEL JAAIVD010000008;XM_032918486 XP_032774377 palmitoyltransferase ZDHHC2;zinc finger DHHC-type palmitoyltransferase 2 protein-coding 625877916 LOC116895744 glyceraldehyde-3-phosphate dehydrogenase-like 3 35005161 35005586 + 22301074;30032202 116895744 MODEL JAAIVD010000012;XM_032896914 XP_032752805 protein-coding 625877919 Rhpn2 rhophilin Rho GTPase binding protein 2 INVOLVED IN glomerular filtration (ortholog); negative regulation of stress fiber assembly (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) 2 163273876 163333089 - 22301074;30032202 116892268 MODEL JAAIVD010000001;XM_032893857 XP_032749748 rhophilin-2 protein-coding 625877938 LOC116888356 elongation factor 1-alpha 1-like 1 87124881 87126284 + 116888356 MODEL JAAIVD010000025 pseudo 625877939 LOC116905003 bile acid-CoA:amino acid N-acyltransferase 7 57384431 57391990 + 22301074;30032202 116905003 MODEL JAAIVD010000026;XM_032907688 XP_032763579 protein-coding 625877946 Casp3 caspase 3 ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); cyclin-dependent protein serine/threonine kinase inhibitor activity (ortholog); cysteine-type endopeptidase activity (ortholog); INVOLVED IN anterior neural tube closure (ortholog); apoptotic process (ortholog); axonal fasciculation (ortholog); PARTICIPATES IN apoptotic cell death pathway; extrinsic apoptotic pathway; FasL mediated signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Liver Failure (ortholog); Acute Lung Injury (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); death-inducing signaling complex (ortholog) 13 41290923 41309762 - 22301074;30032202 116914546 MODEL JAAIVD010000008;XM_032918881 XP_032774772 caspase-3 protein-coding 625877957 LOC116899463 60S ribosomal protein L29-like 4 139072483 139072973 - 22301074;30032202 116899463 MODEL JAAIVD010000003;XM_032901261 XP_032757152 protein-coding 625877961 Mfap3l microfibril associated protein 3 like FOUND IN cell junction (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 13 28304317 28349325 - 116914220 MODEL JAAIVD010000008;XM_032918416 XP_032774307 microfibrillar-associated protein 3-like protein-coding 625877968 LOC116895109 U2 spliceosomal RNA 2 42446823 42446909 + 116895109 MODEL JAAIVD010000001 pseudo 625877969 Pld1 phospholipase D1 ENCODES a protein that exhibits D-type glycerophospholipase activity (ortholog); INVOLVED IN cellular response to nutrient (ortholog); defense response to Gram-positive bacterium (ortholog); phosphatidic acid biosynthetic process (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Cardiomegaly (ortholog); developmental cardiac valvular defect (ortholog); Experimental Seizures (ortholog); FOUND IN apical plasma membrane (ortholog); cholinergic synapse (ortholog); endocytic vesicle (ortholog) 3 126531701 126733956 - 22301074;30032202 116896987 MODEL JAAIVD010000012;XM_032898579;XM_032898580;XM_032898581 XP_032754470;XP_032754471;XP_032754472 protein-coding 625878007 LOC116889619 ribosome biogenesis regulatory protein homolog Y 681521 682465 - 116889619 MODEL JAAIVD010000015 pseudo 625878008 Samd7 sterile alpha motif domain containing 7 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of gene expression (ortholog); negative regulation of gene expression, epigenetic (ortholog); retinal rod cell development (ortholog); ASSOCIATED WITH macular degeneration (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); PRC1 complex (ortholog) 3 124981475 124996193 + 22301074 116895557 MODEL JAAIVD010000012;XM_032896793 XP_032752684 sterile alpha motif domain-containing protein 7 protein-coding 625878017 Gnrhr gonadotropin releasing hormone receptor ENCODES a protein that exhibits gonadotropin-releasing hormone receptor activity (ortholog); growth hormone-releasing hormone receptor activity (ortholog); INVOLVED IN circadian rhythm (ortholog); G protein-coupled receptor signaling pathway (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH Adrenal Gland Neoplasms (ortholog); amenorrhea (ortholog); Delayed Puberty (ortholog) 11 559545 579065 - 22301074;30032202 116912421 MODEL JAAIVD010000006;XM_032916488;XM_032916489 XP_032772379;XP_032772380 gonadotropin-releasing hormone receptor protein-coding 625878028 LOC116912634 alpha-S2-casein-like B 11 1133182 1150690 - 22301074;30032202 116912634 MODEL JAAIVD010000006;XM_032916752 XP_032772643 protein-coding 625878040 Pxn paxillin ENCODES a protein that exhibits beta-catenin binding (ortholog); BH4 domain binding (ortholog); integrin binding (ortholog); INVOLVED IN branching morphogenesis of an epithelial tube (ortholog); cell migration (ortholog); cellular response to reactive oxygen species (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; insulin-like growth factor signaling pathway; integrin mediated signaling pathway; ASSOCIATED WITH Experimental Melanoma (ortholog); lung non-small cell carcinoma (ortholog); Neoplasm Metastasis (ortholog); FOUND IN cell leading edge (ortholog); cell-cell junction (ortholog); cytosol (ortholog) 16 38270797 38318050 - 30032202 116885304 MODEL JAAIVD010000004;XM_032886554;XM_032886555;XM_032886556;XM_032886557;XM_032886558 XP_032742445;XP_032742446;XP_032742447;XP_032742448;XP_032742449 protein-coding 625878070 LOC116893236 60S ribosomal protein L27a-like 2 121077688 121078141 + 116893236 MODEL JAAIVD010000001 pseudo 625878071 LOC116908183 cyclin-dependent kinases regulatory subunit 2-like 8 53321398 53348525 - 116908183 MODEL JAAIVD010000027 pseudo 625878072 Bub1 BUB1 mitotic checkpoint serine/threonine kinase ENCODES a protein that exhibits histone H2A kinase activity (ortholog); protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN chromosome segregation (ortholog); mitotic spindle assembly checkpoint signaling (ortholog); positive regulation of intrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH colon carcinoma (ortholog); colorectal cancer (ortholog); Colorectal Neoplasms (ortholog); FOUND IN chromosome, centromeric region (ortholog); condensed chromosome, centromeric region (ortholog); kinetochore (ortholog) 5 106577954 106608655 - 22301074;30032202 116901943 MODEL JAAIVD010000023;XM_032904176 XP_032760067 mitotic checkpoint serine/threonine-protein kinase BUB1 protein-coding 625878101 Gpbp1 GC-rich promoter binding protein 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) 3 185554276 185619418 + 22301074;30032202 116897197 MODEL JAAIVD010000012;XM_032898900;XM_032898901;XM_032898902 XP_032754791;XP_032754792;XP_032754793 vasculin protein-coding 625878121 Thrb thyroid hormone receptor beta ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); apoptotic process (ortholog); cellular response to thyroid hormone stimulus (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); attention deficit hyperactivity disorder (ortholog); breast cancer (ortholog); FOUND IN nuclear body (ortholog); nucleus (ortholog) 12 87040043 87133169 + 22301074;30032202 116913108 MODEL JAAIVD010000007;XM_032917248;XM_032917249;XM_032917250 XP_032773139;XP_032773140;XP_032773141 protein-coding 625878140 LOC116905054 uncharacterized LOC116905054 7 68406673 68439803 - 30032202 116905054 MODEL JAAIVD010000026;XM_032907745;XM_032907746 XP_032763636;XP_032763637 uncharacterized protein LOC116905054 protein-coding 625878154 Cpne3 copine 3 ENCODES a protein that exhibits calcium-dependent phospholipid binding (ortholog); calcium-dependent protein binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); cellular response to growth factor stimulus (ortholog); ERBB2 signaling pathway (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 124160441 124192667 + 30032202 116903111 MODEL JAAIVD010000025;XM_032905448 XP_032761339 copine-3 protein-coding 625878173 LOC116898450 interleukin-17A-like 4 98080468 98082434 + 116898450 MODEL JAAIVD010000003 pseudo 625878174 Map2k5 mitogen-activated protein kinase kinase 5 ENCODES a protein that exhibits ATP binding (ortholog); MAP kinase kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); ERK5 cascade (ortholog); heart development (ortholog); PARTICIPATES IN altered Erk5 MAPK signaling pathway; Erk5 MAPK signaling pathway; ASSOCIATED WITH amphetamine abuse (ortholog); Body Weight (ortholog); Cardiomegaly (ortholog); FOUND IN spindle (ortholog) 8 57453510 57674322 - 22301074 116907769 MODEL JAAIVD010000027;XM_032910908;XM_032910909 XP_032766799;XP_032766800 dual specificity mitogen-activated protein kinase kinase 5 protein-coding 625878203 LOC116889090 fumarate hydratase, mitochondrial-like X 28485062 28486371 - 116889090 MODEL JAAIVD010000014 pseudo 625878204 Dgkq diacylglycerol kinase theta ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); diacylglycerol-dependent serine/threonine kinase activity (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cellular response to bile acid (ortholog); diacylglycerol metabolic process (ortholog); ASSOCIATED WITH Sjogren's syndrome (ortholog); Usher syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytoskeleton (ortholog); cytosol (ortholog) 11 18434365 18448304 - 22301074;30032202 116912171 MODEL JAAIVD010000006;XM_032916097 XP_032771988 protein-coding 625878230 LOC116906418 small nucleolar RNA SNORA28 7 129130975 129131100 + 116906418 MODEL JAAIVD010000026;XR_004388680 snorna 625878233 Ogfod2 2-oxoglutarate and iron dependent oxygenase domain containing 2 FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) 16 29750368 29753339 - 22301074 116885518 MODEL JAAIVD010000004;XM_032886813;XM_032886814 XP_032742704;XP_032742705 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 protein-coding 625878248 LOC116889869 60S ribosomal protein L7a-like 1 155176140 155176927 - 116889869 MODEL JAAIVD010000025 pseudo 625878249 Sepsecs Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase ENCODES a protein that exhibits O-phosphoseryl-tRNA(Sec) selenium transferase activity (ortholog); tRNA binding (ortholog); INVOLVED IN conversion of seryl-tRNAsec to selenocys-tRNAsec (ortholog); selenocysteine incorporation (ortholog); ASSOCIATED WITH cerebellar ataxia (ortholog); cerebellar hypoplasia (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 11 53466641 53495550 + 22301074;30032202 116912217 MODEL JAAIVD010000006;XM_032916165;XM_032916166 XP_032772056;XP_032772057 O-phosphoseryl-tRNA(Sec) selenium transferase protein-coding 625878267 Pja2 praja ring finger ubiquitin ligase 2 ENCODES a protein that exhibits cAMP-dependent protein kinase inhibitor activity (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN inflammatory response (ortholog); innate immune response (ortholog); long-term memory (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); cytoplasm (ortholog) 4 174369716 174419425 - 30032202 116899692 MODEL JAAIVD010000003;XM_032901715;XM_032901716 XP_032757606;XP_032757607 E3 ubiquitin-protein ligase Praja-2 protein-coding 625878282 Bmal2 basic helix-loop-helix ARNT like 2 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); E-box binding (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); positive regulation of circadian rhythm (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); chronic obstructive pulmonary disease (ortholog); COVID-19 (ortholog); FOUND IN CLOCK-BMAL transcription complex (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 6 4453528 4500051 + 22301074;30032202 116903094 MODEL JAAIVD010000024;XM_032905416 XP_032761307 Arntl2 aryl hydrocarbon receptor nuclear translocator like 2;aryl hydrocarbon receptor nuclear translocator-like protein 2 protein-coding 625878302 Llph LLP homolog, long-term synaptic facilitation factor ENCODES a protein that exhibits obsolete basal RNA polymerase II transcription machinery binding (ortholog); INVOLVED IN dendrite extension (ortholog); positive regulation of dendritic spine development (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog) 1 198202822 198208108 + 30032202 116909437 MODEL JAAIVD010000025;XM_032913015 XP_032768906 protein LLP homolog protein-coding 625878309 LOC116895289 uricase 3 14275710 14310536 - 22301074;30032202 116895289 MODEL JAAIVD010000012;X13098;XM_032896601 CAA31490;XP_032752492 protein-coding 625878321 Gcdh glutaryl-CoA dehydrogenase ENCODES a protein that exhibits fatty-acyl-CoA binding (ortholog); flavin adenine dinucleotide binding (ortholog); glutaryl-CoA dehydrogenase activity (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); fatty acid oxidation (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; carnitine palmitoyltransferase I deficiency pathway; ethylmalonic encephalopathy pathway; ASSOCIATED WITH congenital dyserythropoietic anemia type IVa (ortholog); genetic disease (ortholog); glutaric acidemia I (ortholog); FOUND IN mitochondrion (ortholog); nucleus (ortholog) 17 15396972 15402841 + 22301074;30032202 116886242 MODEL JAAIVD010000011;XM_032887652;XM_032887653 XP_032743543;XP_032743544 glutaryl-CoA dehydrogenase, mitochondrial protein-coding 625878340 Cd247 CD247 molecule ENCODES a protein that exhibits identical protein binding (ortholog); MHC class II receptor activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); Fc-gamma receptor signaling pathway (ortholog); positive regulation of protein localization to cell surface (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH Cardiac Fibrosis (ortholog); COVID-19 (ortholog); immunodeficiency 25 (ortholog); FOUND IN alpha-beta T cell receptor complex (ortholog); cytoplasm (ortholog); Fc-gamma receptor III complex (ortholog) 10 44891658 44966442 + 22301074 116911382 MODEL JAAIVD010000005;XM_032915331;XM_032915332 XP_032771222;XP_032771223 T-cell surface glycoprotein CD3 zeta chain protein-coding 625878354 Mgat5 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity (ortholog); glycosyltransferase activity (ortholog); INVOLVED IN positive regulation of cell migration (ortholog); positive regulation of receptor signaling pathway via STAT (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Enterovirus Infections (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN Golgi apparatus (ortholog); membrane (ortholog) 10 8256105 8542572 - 22301074;30032202 116911250 MODEL JAAIVD010000005;XM_032915150 XP_032771041 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A protein-coding 625878377 LOC116910886 RNA-binding protein FUS-like 10 7832779 7834358 - 116910886 MODEL JAAIVD010000005 pseudo 625878378 Mfsd12 major facilitator superfamily domain containing 12 ENCODES a protein that exhibits cysteine transmembrane transporter activity (ortholog); INVOLVED IN cysteine transmembrane transport (ortholog); negative regulation of melanin biosynthetic process (ortholog); pigment metabolic process involved in pigmentation (ortholog); FOUND IN late endosome (ortholog); lysosome (ortholog); melanosome (ortholog) 1 153528484 153535205 - 30032202 116904337 MODEL JAAIVD010000025;XM_032907239;XM_032907240;XM_032907243 XP_032763130;XP_032763131;XP_032763134 major facilitator superfamily domain-containing protein 12 protein-coding 625878399 Colec12 collectin subfamily member 12 ENCODES a protein that exhibits low-density lipoprotein particle binding (ortholog); pattern recognition receptor activity (ortholog); scavenger receptor activity (ortholog); INVOLVED IN defense response to bacterium (ortholog); immune response (ortholog); phagocytosis, recognition (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); substance-related disorder (ortholog) 15 34205609 34237754 - 30032202 116884748 MODEL JAAIVD010000010;XM_032885967 XP_032741858 collectin-12 protein-coding 625878411 Kif13a kinesin family member 13A ENCODES a protein that exhibits microtubule motor activity (ortholog); INVOLVED IN endosome to lysosome transport (ortholog); Golgi to plasma membrane protein transport (ortholog); intracellular protein transport (ortholog); ASSOCIATED WITH epilepsy (ortholog); FOUND IN centrosome (ortholog); endosome membrane (ortholog); midbody (ortholog) 14 65733688 65918225 - 22301074;30032202 116884056 MODEL JAAIVD010000009;XM_032885303 XP_032741194 kinesin-like protein KIF13A protein-coding 625878455 LOC116892835 2'-deoxynucleoside 5'-phosphate N-hydrolase 1-like 2 191661030 191661586 - 116892835 MODEL JAAIVD010000001 pseudo 625878456 LOC116895975 40S ribosomal protein S14-like 3 156616846 156617276 + 116895975 MODEL JAAIVD010000012 pseudo 625878457 Pcgf5 polycomb group ring finger 5 ENCODES a protein that exhibits histone H2AK119 ubiquitin ligase activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); random inactivation of X chromosome (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH COVID-19 (ortholog); FOUND IN centrosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 37358418 37475913 - 30032202 116891140 MODEL JAAIVD010000001;XM_032891881;XM_032891882;XM_032891883 XP_032747772;XP_032747773;XP_032747774 polycomb group RING finger protein 5 protein-coding 625878477 LOC116886249 pyruvate kinase PKM-like 1 14295158 14299540 + 116886249 MODEL JAAIVD010000025 pseudo 625878478 LOC116884623 40S ribosomal protein S2-like 15 43431202 43432446 + 116884623 MODEL JAAIVD010000010 pseudo 625878479 Enoph1 enolase-phosphatase 1 ENCODES a protein that exhibits acireductone synthase activity (ortholog); INVOLVED IN L-methionine cycle (ortholog); ASSOCIATED WITH pneumoconiosis (ortholog) 11 10286461 10313268 + 22301074;30032202 116912893 MODEL JAAIVD010000006;XM_032917151;XM_032917152 XP_032773042;XP_032773043 enolase-phosphatase E1 protein-coding 625878494 LOC116909193 histone H3.3A-like 1 195045908 195046354 - 116909193 MODEL JAAIVD010000025 pseudo 625878495 LOC116905989 uncharacterized LOC116905989 1 155798311 155805745 + 116905989 MODEL JAAIVD010000025;XR_004388582 ncrna 625878500 Pwwp3b PWWP domain containing 3B ASSOCIATED WITH factor VIII deficiency (ortholog) X 93618621 93622454 - 116889162 MODEL JAAIVD010000014;XM_032890330 XP_032746221 PWWP domain-containing DNA repair factor 3B protein-coding 625878505 LOC116885446 protein DBF4 homolog A-like 1 70729253 70731192 + 116885446 MODEL JAAIVD010000025 pseudo 625878506 Chrnb4 cholinergic receptor nicotinic beta 4 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); action potential (ortholog); behavioral response to nicotine (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); chronic obstructive pulmonary disease (ortholog); cocaine abuse (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cell junction (ortholog); cholinergic synapse (ortholog) 8 49105759 49124647 - 22301074;30032202 116907753 MODEL JAAIVD010000027;XM_032910891 XP_032766782 neuronal acetylcholine receptor subunit beta-4 protein-coding 625878516 Ifi35 interferon induced protein 35 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN macrophage activation involved in immune response (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of non-canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Human Influenza (ortholog); Spontaneous Abortions (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) 9 60738104 60747335 + 30032202 116908828 MODEL JAAIVD010000002;XM_032912248 XP_032768139 interferon-induced 35 kDa protein protein-coding 625878527 Tfap2d transcription factor AP-2 delta ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN inferior colliculus development (ortholog); negative regulation of neuron apoptotic process (ortholog); positive regulation of DNA-templated transcription (ortholog); FOUND IN transcription regulator complex (ortholog) 4 96681357 96740197 + 30032202 116898101 MODEL JAAIVD010000003;XM_032899485 XP_032755376 transcription factor AP-2-delta protein-coding 625878538 Socs6 suppressor of cytokine signaling 6 INVOLVED IN negative regulation of T cell activation (ortholog); proteasomal protein catabolic process (ortholog); regulation of growth (ortholog); PARTICIPATES IN insulin signaling pathway; Jak-Stat signaling pathway; FOUND IN immunological synapse (ortholog) 15 43869524 43892695 + 22301074;30032202 116884312 MODEL JAAIVD010000010;XM_032885420;XM_032885421;XM_032885422 XP_032741311;XP_032741312;XP_032741313 protein-coding 625878549 Prkag1 protein kinase AMP-activated non-catalytic subunit gamma 1 ENCODES a protein that exhibits ADP binding (ortholog); AMP binding (ortholog); AMP-activated protein kinase activity (ortholog); INVOLVED IN cellular response to nutrient levels (ortholog); import into nucleus (ortholog); regulation of catalytic activity (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; vascular endothelial growth factor signaling pathway; FOUND IN nucleotide-activated protein kinase complex (ortholog); nucleus (ortholog); protein-containing complex (ortholog) 1 271636179 271653287 - 116884859 MODEL JAAIVD010000025;XM_032886101 XP_032741992 5'-AMP-activated protein kinase subunit gamma-1 protein-coding 625878565 LOC116908339 small nucleolar RNA SNORA73 family 8 111357146 111357348 + 116908339 MODEL JAAIVD010000027;XR_004388891 snorna 625878568 LOC116887305 60S ribosomal protein L15-like 18 33265764 33266372 + 116887305 MODEL JAAIVD010000013 pseudo 625878569 Zmat5 zinc finger matrin-type 5 FOUND IN nucleoplasm (ortholog); U12-type spliceosomal complex (ortholog) 11 73676669 73715929 + 22301074;30032202 116912278 MODEL JAAIVD010000006;XM_032916273;XM_032916274 XP_032772164;XP_032772165 zinc finger matrin-type protein 5 protein-coding 625878582 LOC116910884 uncharacterized protein C9orf85 homolog 10 88060403 88065609 + 116910884 MODEL JAAIVD010000005 pseudo 625878583 Minar1 membrane integral NOTCH2 associated receptor 1 INVOLVED IN negative regulation of angiogenesis (ortholog); negative regulation of cell growth (ortholog); negative regulation of cell population proliferation (ortholog); FOUND IN plasma membrane (ortholog) 8 81766327 81798718 + 30032202 116907829 MODEL JAAIVD010000027;XM_032911014;XM_032911015 XP_032766905;XP_032766906 major intrinsically disordered Notch2-binding receptor 1 protein-coding 625878596 LOC116890631 U2 spliceosomal RNA 1 228257063 228257249 - 116890631 MODEL JAAIVD010000025;XR_004386774 snrna 625878599 Pimreg PICALM interacting mitotic regulator FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 9 43458705 43463523 - 116909915 MODEL JAAIVD010000002;XM_032913676 XP_032769567 protein PIMREG protein-coding 625878609 Idnk IDNK gluconokinase ENCODES a protein that exhibits gluconokinase activity (ortholog) 14 79960200 79967260 - 30032202 116883755 MODEL JAAIVD010000009;XM_032884999;XM_032885000 XP_032740890;XP_032740891 probable gluconokinase protein-coding 625878620 LOC116905160 PCNA-interacting partner-like 7 87620062 87621643 + 116905160 MODEL JAAIVD010000026 pseudo 625878621 Muc13 mucin 13, cell surface associated ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN maintenance of gastrointestinal epithelium (ortholog); ASSOCIATED WITH ischemia (ortholog); Nematode Infections (ortholog); FOUND IN apical plasma membrane (ortholog); cytosol (ortholog); extracellular region (ortholog) 4 18592306 18611206 + 116898796 MODEL JAAIVD010000003;XM_032900147 XP_032756038 mucin-13 protein-coding 625878635 LOC116902088 vitamin K epoxide reductase complex subunit 1-like protein 1 5 130127377 130127830 - 116902088 MODEL JAAIVD010000023 pseudo 625878636 Limch1 LIM and calponin homology domains 1 ENCODES a protein that exhibits myosin II head/neck binding (ortholog); INVOLVED IN cytoplasmic actin-based contraction involved in cell motility (ortholog); negative regulation of cell migration (ortholog); positive regulation of protein phosphorylation (ortholog); ASSOCIATED WITH malignant mesothelioma (ortholog); substance-related disorder (ortholog); FOUND IN actin cytoskeleton (ortholog); myosin II complex (ortholog); stress fiber (ortholog) 11 23871928 24181227 + 22301074;30032202 116912086 MODEL JAAIVD010000006;XM_032915969;XM_032915970;XM_032915971 XP_032771860;XP_032771861;XP_032771862 LIM and calponin homology domains-containing protein 1 protein-coding 625878674 LOC116895888 60S ribosomal protein L23-like 3 114236879 114237325 - 116895888 MODEL JAAIVD010000012 pseudo 625878675 LOC116904052 60S ribosomal protein L3-like 6 117688079 117688797 - 22301074;30032202 116904052 MODEL JAAIVD010000024;XM_032906911 XP_032762802 protein-coding 625878679 LOC116897409 U6 spliceosomal RNA 3 90519823 90519925 + 116897409 MODEL JAAIVD010000012;XR_004387452 snrna 625878682 Mpp2 MAGUK p55 scaffold protein 2 ENCODES a protein that exhibits PDZ domain binding (ortholog); structural constituent of postsynaptic density (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN excitatory postsynaptic potential (ortholog); long-term synaptic potentiation (ortholog); protein homooligomerization (ortholog); FOUND IN cytoskeleton (ortholog); dendrite membrane (ortholog); dendritic shaft (ortholog) 9 61352358 61379435 - 22301074;30032202 116909196 MODEL JAAIVD010000002;XM_032912695;XM_032912696 XP_032768586;XP_032768587 MAGUK p55 subfamily member 2;membrane palmitoylated protein 2 protein-coding 625878701 LOC116888612 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2-like X 42471731 42472649 - 116888612 MODEL JAAIVD010000014 pseudo 625878702 LOC116885078 U6 spliceosomal RNA 15 22703082 22703184 - 116885078 MODEL JAAIVD010000010;XR_004385951 snrna 625878705 Dnajc21 DnaJ heat shock protein family (Hsp40) member C21 ASSOCIATED WITH Bone Marrow Failure Syndrome 3 (ortholog); Congenital Bone Marrow Failure Syndromes (ortholog); Funnel Chest (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog) 3 170266092 170287051 + 22301074;30032202 116896002 MODEL JAAIVD010000012;XM_032897027 XP_032752918 dnaJ homolog subfamily C member 21 protein-coding 625878720 Lrrn3 leucine rich repeat neuronal 3 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN positive regulation of protein phosphorylation (ortholog); positive regulation of synapse assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN clathrin adaptor complex (ortholog) 7 54614478 54617509 - 22301074 116904991 MODEL JAAIVD010000026;XM_032907672 XP_032763563 leucine-rich repeat neuronal protein 3 protein-coding 625878725 Lrp2 LDL receptor related protein 2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); calcium ion binding (ortholog); cargo receptor activity (ortholog); INVOLVED IN amyloid-beta clearance (ortholog); animal organ regeneration (ortholog); aorta development (ortholog); PARTICIPATES IN altered Hedgehog signaling pathway; Hedgehog signaling pathway; pancreatic cancer pathway; ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); acute kidney failure (ortholog); Albuminuria (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); axon (ortholog) 5 46732163 46887606 - 22301074 116901481 MODEL JAAIVD010000023;XM_032903435 XP_032759326 low-density lipoprotein receptor-related protein 2 protein-coding 625878809 LOC116902681 taste receptor type 2 member 123 6 15794785 15795786 + 22301074;30032202 116902681 MODEL JAAIVD010000024;XM_032905040 XP_032760931 protein-coding 625878812 Ptpn6 protein tyrosine phosphatase non-receptor type 6 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); cytokine receptor binding (ortholog); natural killer cell lectin-like receptor binding (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); CD27 signaling pathway (ortholog); cell differentiation (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT2 receptor; epidermal growth factor/neuregulin signaling pathway; erythropoietin signaling pathway; ASSOCIATED WITH anogenital venereal wart (ortholog); autism spectrum disorder (ortholog); calcinosis (ortholog); FOUND IN alpha-beta T cell receptor complex (ortholog); apical dendrite (ortholog); cell-cell junction (ortholog) 6 23144870 23163426 + 22301074 116903284 MODEL JAAIVD010000024;XM_032905707 XP_032761598 tyrosine-protein phosphatase non-receptor type 6 protein-coding 625878832 LOC116913048 U6 spliceosomal RNA 11 4087954 4088065 - 116913048 MODEL JAAIVD010000006;XR_004389583 snrna 625878835 Spmip10 sperm microtubule inner protein 10 INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal B tubule inner sheath (ortholog); sperm flagellum (ortholog) 15 75232636 75236398 - 30032202 116884604 MODEL JAAIVD010000010;XM_032885743 XP_032741634 Tex43 sperm associated microtubule inner protein 10;testis expressed 43;testis-expressed protein 43 protein-coding 625878842 LOC116903788 submandibular gland secretory Glx-rich protein CB-like 6 17029672 17032050 - 30032202 116903788 MODEL JAAIVD010000024;XM_032906482 XP_032762373 protein-coding 625878847 Ficd FIC domain protein adenylyltransferase ENCODES a protein that exhibits AMPylase activity (ortholog); ATP binding (ortholog); Hsp70 protein binding (ortholog); INVOLVED IN protein adenylylation (ortholog); regulation of IRE1-mediated unfolded protein response (ortholog); response to endoplasmic reticulum stress (ortholog); ASSOCIATED WITH hereditary spastic paraplegia 92 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 16 40235661 40239167 - 22301074 116885615 MODEL JAAIVD010000004;XM_032886914 XP_032742805 protein adenylyltransferase FICD protein-coding 625878853 Kcnk9 potassium two pore domain channel subfamily K member 9 ENCODES a protein that exhibits identical protein binding (ortholog); outward rectifier potassium channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN cellular response to acidic pH (ortholog); negative regulation of aldosterone secretion (ortholog); potassium ion import across plasma membrane (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Birk-Barel syndrome (ortholog); childhood absence epilepsy (ortholog); FOUND IN mitochondrial inner membrane (ortholog); plasma membrane (ortholog); synaptic vesicle (ortholog) 1 245301291 245343362 - 22301074;30032202 116912348 MODEL JAAIVD010000025;XM_032916403;XM_032916409 XP_032772294;XP_032772300 potassium channel subfamily K member 9 protein-coding 625878863 Supt3h SPT3 homolog, SAGA and STAGA complex component ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog); SAGA complex (ortholog) 4 84766194 85092383 - 22301074;30032202 116899140 MODEL JAAIVD010000003;XM_032900678;XM_032900679;XM_032900680 XP_032756569;XP_032756570;XP_032756571 transcription initiation protein SPT3 homolog protein-coding 625878885 LOC116894638 glyceraldehyde-3-phosphate dehydrogenase-like 2 196763105 196764108 - 116894638 MODEL JAAIVD010000001 pseudo 625878886 Tmem230 transmembrane protein 230 INVOLVED IN axonal transport (ortholog); synaptic vesicle transport (ortholog); ASSOCIATED WITH Parkinson's disease (ortholog); prostate cancer (ortholog); FOUND IN early endosome (ortholog); late endosome (ortholog); recycling endosome (ortholog) 5 111913102 111962375 - 30032202 116902000 MODEL JAAIVD010000023;XM_032904259;XM_032904261;XM_032904262;XM_032904263;XM_032904264 XP_032760150;XP_032760152;XP_032760153;XP_032760154;XP_032760155 protein-coding 625878904 Nipa2 NIPA magnesium transporter 2 INVOLVED IN magnesium ion transport (ortholog); FOUND IN early endosome (ortholog); plasma membrane (ortholog) 2 143231835 143257963 + 22301074;30032202 116892046 MODEL JAAIVD010000001;XM_032893511;XM_032893513;XM_032893514;XM_032893515;XM_032893516;XM_032893517;XM_032893518;XM_032893519 XP_032749402;XP_032749404;XP_032749405;XP_032749406;XP_032749407;XP_032749408;XP_032749409;XP_032749410 magnesium transporter NIPA2 protein-coding 625878939 LOC116887844 60S ribosomal protein L10-3-like X 40802045 40895440 - 116887844 MODEL JAAIVD010000014 pseudo 625878940 LOC116890072 olfactory receptor 12-like 1 215008912 215009856 - 22301074;30032202 116890072 MODEL JAAIVD010000025;XM_032890835 XP_032746726 protein-coding 625878943 Ddx11 DEAD/H-box helicase 11 ENCODES a protein that exhibits 5'-3' DNA helicase activity (ortholog); ATP-dependent activity, acting on DNA (ortholog); ATP-dependent activity, acting on RNA (ortholog); INVOLVED IN cellular response to bleomycin (ortholog); cellular response to cisplatin (ortholog); cellular response to hydroxyurea (ortholog); ASSOCIATED WITH Chromosome Breakage (ortholog); genetic disease (ortholog); microcephaly (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); midbody (ortholog) 4 154905926 154932010 - 22301074;30032202 116899560 MODEL JAAIVD010000003;XM_032901456 XP_032757347 ATP-dependent DNA helicase DDX11 protein-coding 625878973 Spmap1 sperm microtubule associated protein 1 9 56609537 56613545 + 116910168 MODEL JAAIVD010000002;XM_032914027 XP_032769918 C9H17orf98 chromosome 9 C17orf98 homolog;uncharacterized protein C17orf98 homolog protein-coding 625878980 Ddx39b DExD-box helicase 39B ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent activity, acting on RNA (ortholog); ATP-dependent protein binding (ortholog); INVOLVED IN liver development (ortholog); mRNA export from nucleus (ortholog); mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; spliceosome pathway; ASSOCIATED WITH type 1 diabetes mellitus (ortholog); FOUND IN cytoplasm (ortholog); nuclear matrix (ortholog); nuclear speck (ortholog) 18 7841145 7854098 + 22301074;30032202 116886924 MODEL JAAIVD010000013;XM_032888403 XP_032744294 spliceosome RNA helicase DDX39B protein-coding 625878995 Mov10l1 Mov10 like RNA helicase 1 ENCODES a protein that exhibits piRNA binding (ortholog); RNA helicase activity (ortholog); INVOLVED IN germ cell development (ortholog); male meiosis I (ortholog); male meiotic nuclear division (ortholog); ASSOCIATED WITH azoospermia (ortholog); male infertility (ortholog); spermatogenic failure 3 (ortholog); FOUND IN P granule (ortholog); pi-body (ortholog) 1 258297723 258363122 + 22301074 116914884 MODEL JAAIVD010000025;XM_032919328 XP_032775219 Mov10 like RISC complex RNA helicase 1;RNA helicase Mov10l1 protein-coding 625879023 Slc43a1 solute carrier family 43 member 1 ENCODES a protein that exhibits L-amino acid transmembrane transporter activity (ortholog); L-isoleucine transmembrane transporter activity (ortholog); L-leucine transmembrane transporter activity (ortholog); INVOLVED IN isoleucine transport (ortholog); L-amino acid transport (ortholog); L-leucine transport (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog); podocyte foot (ortholog) 5 62222412 62246533 + 22301074;30032202 116900227 MODEL JAAIVD010000023;XM_032901978 XP_032757869 large neutral amino acids transporter small subunit 3 protein-coding 625879042 Jdp2 Jun dimerization protein 2 ENCODES a protein that exhibits cAMP response element binding (ortholog); chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); negative regulation of fat cell differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleus (ortholog) 7 99708448 99750539 + 22301074;30032202 116905299 MODEL JAAIVD010000026;XM_032908167 XP_032764058 protein-coding 625879050 Gas2l2 growth arrest specific 2 like 2 ENCODES a protein that exhibits actin filament binding (ortholog); cytoskeletal anchor activity (ortholog); G-protein alpha-subunit binding (ortholog); INVOLVED IN microtubule bundle formation (ortholog); negative regulation of microtubule depolymerization (ortholog); positive regulation of G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH primary ciliary dyskinesia (ortholog); primary ciliary dyskinesia 3 (ortholog); primary ciliary dyskinesia 41 (ortholog); FOUND IN actin filament (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) 9 87254861 87261853 + 22301074;30032202 116909482 MODEL JAAIVD010000002;XM_032913078 XP_032768969 GAS2-like protein 2 protein-coding 625879059 Atp6v1g2 ATPase H+ transporting V1 subunit G2 ENCODES a protein that exhibits proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN synaptic vesicle lumen acidification (ortholog); FOUND IN extrinsic component of synaptic vesicle membrane (ortholog); synaptic vesicle membrane (ortholog); vacuolar proton-transporting V-type ATPase complex (ortholog) 18 7836265 7838495 + 22301074;30032202 116887071 MODEL JAAIVD010000013;XM_032888575;XM_032888576 XP_032744466;XP_032744467 V-type proton ATPase subunit G 2 protein-coding 625879069 Btg2 BTG anti-proliferation factor 2 ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); associative learning (ortholog); cellular response to phorbol 13-acetate 12-myristate (ortholog); ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); brain ischemia (ortholog); breast cancer (ortholog) 10 1609721 1613478 + 30032202 116911313 MODEL JAAIVD010000005;XM_032915228 XP_032771119 protein BTG2 protein-coding 625879075 LOC116914774 sperm-associated antigen 11 13 64971981 64973713 - 22301074;30032202 116914774 MODEL JAAIVD010000008;XM_032919221 XP_032775112 protein-coding 625879081 Fyb2 FYN binding protein 2 INVOLVED IN cell adhesion mediated by integrin (ortholog); T cell receptor signaling pathway (ortholog); FOUND IN immunological synapse (ortholog); membrane raft (ortholog) 1 49580784 49702145 - 22301074;30032202 116891015 MODEL JAAIVD010000025;XM_032891730 XP_032747621 FYN-binding protein 2 protein-coding 625879105 Scaper S-phase cyclin A associated protein in the ER INVOLVED IN antral ovarian follicle growth (ortholog); ovarian follicle development (ortholog); retina development in camera-type eye (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome 1 (ortholog); cone-rod dystrophy (ortholog); fundus dystrophy (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) 8 49619016 49884259 - 22301074 116908061 MODEL JAAIVD010000027;XM_032911331;XM_032911332 XP_032767222;XP_032767223 S phase cyclin A-associated protein in the endoplasmic reticulum protein-coding 625879136 LOC116894409 keratin-associated protein 13-1-like 2 158550117 158550881 + 116894409 MODEL JAAIVD010000001 pseudo 625879137 LOC116889844 ADP/ATP translocase 2-like 22301074;30032202 116889844 MODEL JAAIVD010001995;XM_032890676 XP_032746567 protein-coding 625879138 Trnaa-cgc transfer RNA alanine (anticodon CGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41435765 41435836 + 116884198 MODEL JAAIVD010000009 trna 625879139 LOC116908210 malate dehydrogenase, mitochondrial-like 8 70925423 70926650 + 116908210 MODEL JAAIVD010000027 pseudo 625879140 LOC116907235 40S ribosomal protein SA-like 8 15589731 15590617 + 116907235 MODEL JAAIVD010000027 pseudo 625879141 Runx1t1 RUNX1 partner transcriptional co-repressor 1 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN fat cell differentiation (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of fat cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); Dwarfism (ortholog); FOUND IN nuclear matrix (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 129780787 129925848 - 22301074;30032202 116903258 MODEL JAAIVD010000025;XM_032905643;XM_032905653;XM_032905663;XM_032905674;XM_032905683;XM_032905691 XP_032761534;XP_032761544;XP_032761554;XP_032761565;XP_032761574;XP_032761582 protein CBFA2T1 protein-coding 625879173 LOC116908371 small nucleolar RNA SNORA32 8 77831256 77831377 - 116908371 MODEL JAAIVD010000027;XR_004388919 snorna 625879176 Ednra endothelin receptor type A ENCODES a protein that exhibits endothelin receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); angiogenesis (ortholog); aorta development (ortholog); PARTICIPATES IN endothelin signaling pathway; inflammatory response pathway; Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); asthma (ortholog); Cardiovascular Abnormalities (ortholog); FOUND IN nuclear membrane (ortholog); plasma membrane (ortholog); T-tubule (ortholog) 17 22389030 22442843 + 22301074 116886648 MODEL JAAIVD010000011;XM_032888147 XP_032744038 endothelin-1 receptor protein-coding 625879189 LOC116914309 peptidyl-prolyl cis-trans isomerase A-like 13 37090607 37091175 + 116914309 MODEL JAAIVD010000008 pseudo 625879190 Tysnd1 trypsin like peroxisomal matrix peptidase 1 ENCODES a protein that exhibits identical protein binding (ortholog); protease binding (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN protein processing (ortholog); proteolysis (ortholog); regulation of fatty acid beta-oxidation (ortholog); FOUND IN peroxisome (ortholog) 18 27519096 27525003 + 30032202 116887176 MODEL JAAIVD010000013;XM_032888728 XP_032744619 peroxisomal leader peptide-processing protease;trypsin domain containing 1 protein-coding 625879198 Treml1 triggering receptor expressed on myeloid cells like 1 INVOLVED IN calcium-mediated signaling (ortholog); platelet activation (ortholog); ASSOCIATED WITH systemic juvenile rheumatoid arthritis (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); plasma membrane (ortholog) 4 81564676 81570933 - 30032202 116898029 MODEL JAAIVD010000003;XM_032899418 XP_032755309 trem-like transcript 1 protein protein-coding 625879207 Slc45a4 solute carrier family 45 member 4 ENCODES a protein that exhibits polyamine transmembrane transporter activity (ortholog); putrescine transmembrane transporter activity (ortholog); spermidine transmembrane transporter activity (ortholog); INVOLVED IN behavioral response to pain (ortholog); sensory perception of pain (ortholog); sucrose transport (ortholog); FOUND IN plasma membrane (ortholog) 1 246338958 246406339 - 22301074;30032202 116912428 MODEL JAAIVD010000025;XM_032916498;XM_032916505 XP_032772389;XP_032772396 protein-coding 625879222 Ppp1r12c protein phosphatase 1 regulatory subunit 12C 2 177081262 177104319 - 22301074;30032202 116892653 MODEL JAAIVD010000001;XM_032894475;XM_032894476 XP_032750366;XP_032750367 protein-coding 625879250 Sar1a secretion associated Ras related GTPase 1A ENCODES a protein that exhibits amino acid sensor activity (ortholog); G protein activity (ortholog); INVOLVED IN cellular response to leucine starvation (ortholog); COPII vesicle coating (ortholog); COPII-coated vesicle cargo loading (ortholog); FOUND IN COPII vesicle coat (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum exit site (ortholog) 18 27503713 27516730 + 22301074;30032202 116886860 MODEL JAAIVD010000013;XM_032888313 XP_032744204 GTP-binding protein SAR1a protein-coding 625879261 Ccdc40 coiled-coil domain 40 molecular ruler complex subunit INVOLVED IN axonemal dynein complex assembly (ortholog); axoneme assembly (ortholog); cilium movement (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); hyper IgE recurrent infection syndrome 2 (ortholog); hyper IgE syndrome (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); cytoplasm (ortholog) 9 64762936 64802638 - 30032202 116910136 MODEL JAAIVD010000002;XM_032913971 XP_032769862 coiled-coil domain containing 40;coiled-coil domain-containing protein 40 protein-coding 625879286 Lrriq4 leucine rich repeats and IQ motif containing 4 3 124873644 124895798 + 22301074 116895926 MODEL JAAIVD010000012;XM_032897000 XP_032752891 leucine-rich repeat and IQ domain-containing protein 4 protein-coding 625879296 LOC116898472 small nuclear ribonucleoprotein Sm D1-like 4 111236827 111237253 - 116898472 MODEL JAAIVD010000003 pseudo 625879297 Sap30bp SAP30 binding protein ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase regulator activity (ortholog); INVOLVED IN regulation of mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 9 68095022 68129061 - 22301074;30032202 116909813 MODEL JAAIVD010000002;XM_032913515;XM_032913516 XP_032769406;XP_032769407 SAP30-binding protein protein-coding 625879315 LOC116902638 small nucleolar RNA U85 5 127714624 127714935 + 116902638 MODEL JAAIVD010000023;XR_004388215 snorna 625879318 Elmo1 engulfment and cell motility 1 ENCODES a protein that exhibits guanyl nucleotide exchange factor activator activity (ortholog); SH3 domain binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament-based process (ortholog); cell motility (ortholog); ASSOCIATED WITH Diabetic Nephropathies (ortholog); esophagus adenocarcinoma (ortholog); Stevens-Johnson syndrome (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); guanyl-nucleotide exchange factor complex (ortholog) 14 39133130 39662452 - 30032202 116883890 MODEL JAAIVD010000009;XM_032885159;XM_032885160;XM_032885162;XM_032885163 XP_032741050;XP_032741051;XP_032741053;XP_032741054 engulfment and cell motility protein 1 protein-coding 625879353 LOC116897377 U4 spliceosomal RNA 3 94702256 94702423 + 116897377 MODEL JAAIVD010000012 pseudo 625879354 Eid1 EP300 interacting inhibitor of differentiation 1 ENCODES a protein that exhibits histone acetyltransferase binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN cell differentiation (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Mesothelioma (ortholog); FOUND IN nucleoplasm (ortholog) 5 104004078 104005845 + 30032202 116901906 MODEL JAAIVD010000023;XM_032904120 XP_032760011 EP300-interacting inhibitor of differentiation 1 protein-coding 625879359 Ywhaz tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); phosphoserine residue binding (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to glucose starvation (ortholog); ERK1 and ERK2 cascade (ortholog); PARTICIPATES IN granulocyte-macrophage colony-stimulating factor signaling pathway; histone modification pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; ASSOCIATED WITH absence epilepsy (ortholog); Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); FOUND IN cell leading edge (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 210289055 210313838 - 30032202 116910615 MODEL JAAIVD010000025;XM_032914565 XP_032770456 14-3-3 protein zeta/delta protein-coding 625879369 Fam110c family with sequence similarity 110 member C ENCODES a protein that exhibits alpha-tubulin binding (ortholog); INVOLVED IN positive regulation of cell migration (ortholog); positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); regulation of cell projection assembly (ortholog); FOUND IN cell cortex (ortholog) 7 44431330 44436007 + 30032202 116904945 MODEL JAAIVD010000026;XM_032907590 XP_032763481 protein FAM110C protein-coding 625879375 Dbr1 debranching RNA lariats 1 ENCODES a protein that exhibits RNA lariat debranching enzyme activity (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); protein stabilization (ortholog); RNA fragment catabolic process (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); ENCEPHALITIS, ACUTE, INFECTION (VIRAL)-INDUCED, SUSCEPTIBILITY TO, 11 (ortholog); genetic disease (ortholog); FOUND IN nucleus (ortholog) 8 90921555 90933688 + 30032202 116907312 MODEL JAAIVD010000027;XM_032910258 XP_032766149 lariat debranching enzyme protein-coding 625879387 LOC116907340 secreted seminal-vesicle Ly-6 protein 1-like 8 32767940 32769317 - 116907340 MODEL JAAIVD010000027;XM_032910278 XP_032766169 protein-coding 625879392 Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 INVOLVED IN ceramide metabolic process (ortholog); negative regulation of B cell apoptotic process (ortholog); negative regulation of ceramide biosynthetic process (ortholog); ASSOCIATED WITH allergic asthma (ortholog); asthma (ortholog); childhood-onset asthma (ortholog); FOUND IN endoplasmic reticulum (ortholog); serine palmitoyltransferase complex (ortholog) 9 55800767 55806785 + 22301074;30032202 116909584 MODEL JAAIVD010000002;XM_032913206;XM_032913207 XP_032769097;XP_032769098 ORM1-like protein 3 protein-coding 625879404 Cep63 centrosomal protein 63 ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN centriole replication (ortholog); centrosome duplication (ortholog); meiotic telomere clustering (ortholog); ASSOCIATED WITH genetic disease (ortholog); microcephaly (ortholog); Seckel syndrome (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 8 93882813 93925531 - 30032202 116907359 MODEL JAAIVD010000027;XM_032910293;XM_032910294;XM_032910295;XM_032910296;XM_032910297;XM_032910299;XM_032910300;XM_032910301;XM_032910302;XM_032910303;XM_032910304 XP_032766184;XP_032766185;XP_032766186;XP_032766187;XP_032766188;XP_032766190;XP_032766191;XP_032766192;XP_032766193;XP_032766194;XP_032766195 centrosomal protein of 63 kDa protein-coding 625879451 LOC116888074 RPA-related protein RADX X 90081868 90108849 + 22301074;30032202 116888074 MODEL JAAIVD010000014;XM_032889452 XP_032745343 protein-coding 625879460 LOC116902564 small nucleolar RNA SNORA48 5 51851000 51851145 + 116902564 MODEL JAAIVD010000023;XR_004388160 snorna 625879463 Wdr6 WD repeat domain 6 ENCODES a protein that exhibits enzyme regulator activity (ortholog); enzyme-substrate adaptor activity (ortholog); insulin receptor substrate binding (ortholog); INVOLVED IN G1 to G0 transition (ortholog); negative regulation of autophagy (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH Dwarfism (ortholog); FOUND IN COP9 signalosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 99901942 99908459 - 22301074;30032202 116907598 MODEL JAAIVD010000027;XM_032910646;XM_032910648 XP_032766537;XP_032766539 WD repeat-containing protein 6 protein-coding 625879478 LOC116885938 nidogen-2-like 16 44360500 44412286 + 116885938 MODEL JAAIVD010000004 pseudo 625879479 Ramp3 receptor activity modifying protein 3 ENCODES a protein that exhibits adrenomedullin receptor activity (ortholog); amylin receptor activity (ortholog); coreceptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adrenomedullin receptor signaling pathway (ortholog); amylin receptor 3 signaling pathway (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); Lymphatic Metastasis (ortholog); FOUND IN adrenomedullin receptor complex (ortholog); amylin receptor complex 3 (ortholog); cell surface (ortholog) 11 75590119 75607698 + 22301074;30032202 116912029 MODEL JAAIVD010000006;XM_032915915 XP_032771806 receptor activity-modifying protein 3 protein-coding 625879485 Ammecr1 AMMECR nuclear protein 1 ASSOCIATED WITH Dwarfism (ortholog); midface hypoplasia, hearing impairment, elliptocytosis, and nephrocalcinosis (ortholog); nephrocalcinosis (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) X 94955156 95056647 - 30032202 116889220 MODEL JAAIVD010000014;XM_032890374 XP_032746265 AMME syndrome candidate gene 1 protein protein-coding 625879495 Fhip1b FHF complex subunit HOOK interacting protein 1B INVOLVED IN early endosome to late endosome transport (ortholog); endosome organization (ortholog); endosome to lysosome transport (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN FHF complex (ortholog) 2 104214144 104235621 - 30032202 116891813 MODEL JAAIVD010000001;XM_032893168;XM_032893169;XM_032893170 XP_032749059;XP_032749060;XP_032749061 Fam160a2 FTS and Hook-interacting protein;family with sequence similarity 160 member A2 protein-coding 625879517 Hps4 HPS4 biogenesis of lysosomal organelles complex 3 subunit 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); protein dimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN blood coagulation (ortholog); lysosome organization (ortholog); melanocyte differentiation (ortholog); ASSOCIATED WITH genetic disease (ortholog); Hermansky-Pudlak syndrome (ortholog); Hermansky-Pudlak syndrome 1 (ortholog); FOUND IN BLOC-3 complex (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) 16 41601675 41631955 - 22301074 116885128 MODEL JAAIVD010000004;XM_032886284 XP_032742175 Hermansky-Pudlak syndrome 4 protein protein-coding 625879535 LOC116888104 homeobox protein orthopedia B-like X 98398495 98406578 + 30032202 116888104 MODEL JAAIVD010000014;XM_032889464 XP_032745355 protein-coding 625879541 LOC116913019 U1 spliceosomal RNA 11 50863483 50863634 + 116913019 MODEL JAAIVD010000006 pseudo 625879542 LOC116911388 NHP2-like protein 1 10 57319013 57319487 + 22301074;30032202 116911388 MODEL JAAIVD010000005;XM_032915342 XP_032771233 protein-coding 625879546 Mep1a meprin A subunit alpha ENCODES a protein that exhibits metallodipeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN epidermal growth factor receptor ligand maturation (ortholog); signaling receptor ligand precursor processing (ortholog); ASSOCIATED WITH Colonic Neoplasms (ortholog); FOUND IN membrane (ortholog); meprin A complex (ortholog); plasma membrane (ortholog) 4 86340028 86366552 + 22301074;30032202 116899149 MODEL JAAIVD010000003;XM_032900700;XM_032900702 XP_032756591;XP_032756593 protein-coding 625879566 LOC116912018 MORF4 family-associated protein 1 11 68351901 68353748 + 116912018 MODEL JAAIVD010000006;XM_032915907 XP_032771798 protein-coding 625879571 LOC116895597 histone acetyltransferase KAT8-like 3 152071746 152073085 + 116895597 MODEL JAAIVD010000012 pseudo 625879572 LOC116899081 cAMP-dependent protein kinase inhibitor gamma-like 4 82216008 82216329 + 116899081 MODEL JAAIVD010000003 pseudo 625879573 Rnf17 ring finger protein 17 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN spermatid development (ortholog); FOUND IN cytoplasm (ortholog) 12 68328647 68447384 - 116913630 MODEL JAAIVD010000007;XM_032917896;XM_032917897;XM_032917898 XP_032773787;XP_032773788;XP_032773789 protein-coding 625879617 Tnrc6a trinucleotide repeat containing adaptor 6A INVOLVED IN cellular response to starvation (ortholog); endoderm development (ortholog); miRNA-mediated gene silencing by inhibition of translation (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH familial adult myoclonic epilepsy 6 (ortholog); Myoclonic Epilepsies (ortholog); FOUND IN P-body (ortholog); RISC complex (ortholog) 2 78681527 78834121 - 22301074;30032202 116891550 MODEL JAAIVD010000001;XM_032892712;XM_032892713;XM_032892714;XM_032892715;XM_032892716 XP_032748603;XP_032748604;XP_032748605;XP_032748606;XP_032748607 trinucleotide repeat-containing gene 6A protein protein-coding 625879659 LOC116888911 coiled-coil domain-containing protein 43-like X 23357885 23358829 - 116888911 MODEL JAAIVD010000014 pseudo 625879660 Ropn1 rhophilin associated tail protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cilium organization (ortholog); flagellated sperm motility (ortholog); protein localization to cilium (ortholog); FOUND IN cytoplasm (ortholog); sperm cytoplasmic droplet (ortholog); sperm principal piece (ortholog) 4 19431771 19460549 + 116897859 MODEL JAAIVD010000003;XM_032899266 XP_032755157 ropporin-1A protein-coding 625879670 LOC116908652 diazepam-binding inhibitor-like 5 9 94927738 94928822 + 22301074;30032202 116908652 MODEL JAAIVD010000002;XM_032911922 XP_032767813 protein-coding 625879676 LOC116883840 uncharacterized LOC116883840 14 18475790 18478776 - 116883840 MODEL JAAIVD010000009;XR_004385796 ncrna 625879681 Rnf7 ring finger protein 7 ENCODES a protein that exhibits cullin family protein binding (ortholog); NEDD8 ligase activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); cerebral cortex radially oriented cell migration (ortholog); endoplasmic reticulum unfolded protein response (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 87907795 87915974 - 22301074;30032202 116907220 MODEL JAAIVD010000027;XM_032910184;XM_032910185 XP_032766075;XP_032766076 RING-box protein 2 protein-coding 625879692 LOC116902665 U6 spliceosomal RNA 5 151263275 151263381 - 116902665 MODEL JAAIVD010000023;XR_004388227 snrna 625879695 LOC116886520 60S ribosomal protein L24-like 1 1391760 1392318 - 116886520 MODEL JAAIVD010000025 pseudo 625879696 LOC116887433 RT1 class I histocompatibility antigen, AA alpha chain-like 18 8428203 8534838 + 30032202 116887433 MODEL JAAIVD010000013;XM_032889048;XM_032889049 XP_032744939;XP_032744940 protein-coding 625879710 Hspb1 heat shock protein family B (small) member 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein folding chaperone (ortholog); protein homodimerization activity (ortholog); INVOLVED IN anterograde axonal protein transport (ortholog); cellular response to butyrate (ortholog); cellular response to hydrogen peroxide (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); autosomal dominant distal hereditary motor neuronopathy 2 (ortholog); FOUND IN axon (ortholog); cardiac myofibril (ortholog); contractile muscle fiber (ortholog) 16 18133564 18135215 - 30032202 116885307 MODEL JAAIVD010000004;XM_032886561 XP_032742452 heat shock protein beta-1 protein-coding 625879717 Tmem178b transmembrane protein 178B 6 99554594 99925799 - 22301074;30032202 116903919 MODEL JAAIVD010000024;XM_032906691 XP_032762582 protein-coding 625879725 LOC116890379 U6 spliceosomal RNA 1 234572624 234572723 + 116890379 MODEL JAAIVD010000025 pseudo 625879726 LOC116906862 zinc finger protein 709-like 1 157394495 157408530 - 22301074 116906862 MODEL JAAIVD010000025;XM_032909768 XP_032765659 protein-coding 625879734 LOC116904606 protein salvador homolog 1-like 6 24946107 24947247 + 116904606 MODEL JAAIVD010000024 pseudo 625879735 LOC116897567 small nucleolar RNA SNORA17 3 150845740 150845871 + 116897567 MODEL JAAIVD010000012;XR_004387578 snorna 625879738 LOC116892337 zinc finger protein 420 2 166163150 166165872 - 30032202 116892337 MODEL JAAIVD010000001;XM_032893973 XP_032749864 protein-coding 625879743 LOC116900356 olfactory receptor 5W2-like 5 69262899 69263834 - 22301074;30032202 116900356 MODEL JAAIVD010000023;XM_032902110 XP_032758001 protein-coding 625879747 Atp1b1 ATPase Na+/K+ transporting subunit beta 1 ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); P-type sodium:potassium-exchanging transporter activity (ortholog); INVOLVED IN ATP metabolic process (ortholog); cardiac muscle contraction (ortholog); intracellular calcium ion homeostasis (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Developmental Disabilities (ortholog); essential hypertension (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); caveola (ortholog) 10 43661854 43683122 - 22301074;30032202 116911069 MODEL JAAIVD010000005;X63375;XM_032914837 XP_032770728 sodium/potassium-transporting ATPase subunit beta-1 protein-coding 625879757 Unc50 unc-50 inner nuclear membrane RNA binding protein ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN protein localization to cell surface (ortholog); ASSOCIATED WITH fetal akinesia deformation sequence syndrome 1 (ortholog); FOUND IN Golgi apparatus (ortholog); nuclear inner membrane (ortholog) 4 113633195 113641019 + 30032202 116899299 MODEL JAAIVD010000003;XM_032900952;XM_032900953;XM_032900955 XP_032756843;XP_032756844;XP_032756846 protein unc-50 homolog protein-coding 625879771 Igll5 immunoglobulin lambda like polypeptide 5 ASSOCIATED WITH COVID-19 (ortholog) 4 2139133 2142124 - 30032202 116897770 MODEL JAAIVD010000003;XM_032899199 XP_032755090 immunoglobulin lambda-like polypeptide 5 protein-coding 625879776 Tacc1 transforming acidic coiled-coil containing protein 1 ENCODES a protein that exhibits nuclear estrogen receptor binding (ortholog); nuclear glucocorticoid receptor binding (ortholog); nuclear receptor binding (ortholog); INVOLVED IN cell population proliferation (ortholog); cerebral cortex development (ortholog); interkinetic nuclear migration (ortholog); ASSOCIATED WITH epilepsy (ortholog) 13 61265762 61314351 + 30032202 116914238 MODEL JAAIVD010000008;XM_032918444;XM_032918445;XM_032918446 XP_032774335;XP_032774336;XP_032774337 transforming acidic coiled-coil-containing protein 1 protein-coding 625879802 Letm2 leucine zipper and EF-hand containing transmembrane protein 2 FOUND IN mitochondrion (ortholog) 13 60894654 60915013 + 22301074;30032202 116915115 MODEL JAAIVD010000008;XM_032919550;XM_032919552;XM_032919553;XM_032919554;XM_032919555;XM_032919556;XM_032919557;XM_032919558;XM_032919559;XM_032919560 XP_032775441;XP_032775443;XP_032775444;XP_032775445;XP_032775446;XP_032775447;XP_032775448;XP_032775449;XP_032775450;XP_032775451 LETM1 domain-containing protein LETM2, mitochondrial protein-coding 625879836 Miga1 mitoguardin 1 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN mitochondrial fusion (ortholog); FOUND IN mitochondrion (ortholog); plasma membrane (ortholog) 3 9288673 9339163 + 22301074;30032202 116896154 MODEL JAAIVD010000012;XM_032897139;XM_032897141 XP_032753030;XP_032753032 protein-coding 625879859 Catspert catsper channel auxiliary subunit tau INVOLVED IN calcium ion transmembrane transport (ortholog); flagellated sperm motility (ortholog); protein-containing complex assembly (ortholog); ASSOCIATED WITH prostate cancer (ortholog); spermatogenic failure 68 (ortholog); FOUND IN CatSper complex (ortholog); sperm flagellum (ortholog); sperm principal piece (ortholog) 4 133414866 133510076 + 116899417 MODEL JAAIVD010000003;XM_032901155 XP_032757046 C2cd6 C2 calcium dependent domain containing 6;C2 calcium-dependent domain-containing protein 6 protein-coding 625879882 LOC116889140 FANCD2 opposite strand protein-like X 29965832 29966374 - 116889140 MODEL JAAIVD010000014;XM_032890312 XP_032746203 protein-coding 625879885 Drc11 dynein regulatory complex subunit 11 4 162046198 162157569 - 22301074 116898262 MODEL JAAIVD010000003;XM_032899616 XP_032755507 Iqca1 IQ motif containing with AAA domain 1;dynein regulatory complex protein 11 APPROVED protein-coding 625879908 LOC116907987 ras-specific guanine nucleotide-releasing factor 2-like 8 21868189 21872767 - 22301074;30032202 116907987 MODEL JAAIVD010000027;XM_032911231 XP_032767122 protein-coding 625879915 LOC116886813 peroxiredoxin-1-like 18 29886152 29886928 + 116886813 MODEL JAAIVD010000013 pseudo 625879916 LOC116897578 small nucleolar RNA SNORA17 3 39222802 39222938 + 116897578 MODEL JAAIVD010000012;XR_004387586 snorna 625879919 Lsmem2 leucine rich single-pass membrane protein 2 8 98909991 98914046 - 116907534 MODEL JAAIVD010000027;XM_032910552;XM_032910553 XP_032766443;XP_032766444 leucine-rich single-pass membrane protein 2 protein-coding 625879930 Cacnb1 calcium voltage-gated channel auxiliary subunit beta 1 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); high voltage-gated calcium channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN calcium ion transport (ortholog); cellular response to amyloid-beta (ortholog); protein targeting to membrane (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog); presynapse (ortholog) 9 56362091 56382944 + 22301074;30032202 116909504 MODEL JAAIVD010000002;XM_032913109;XM_032913110 XP_032769000;XP_032769001 voltage-dependent L-type calcium channel subunit beta-1 protein-coding 625879954 LOC116888856 uncharacterized LOC116888856 X 27043846 27045361 - 116888856 MODEL JAAIVD010000014;XR_004386347 ncrna 625879959 Cldn7 claudin 7 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of cell adhesion (ortholog); negative regulation of protein-containing complex assembly (ortholog); ASSOCIATED WITH allergic rhinitis (ortholog); COVID-19 (ortholog); Neoplasm Metastasis (ortholog); FOUND IN apicolateral plasma membrane (ortholog); basolateral plasma membrane (ortholog); bicellular tight junction (ortholog) 9 49574465 49576699 + 22301074;30032202 116910568 MODEL JAAIVD010000002;XM_032914487 XP_032770378 claudin-7 protein-coding 625879967 LOC116902691 uncharacterized LOC116902691 6 40954889 40958074 + 116902691 MODEL JAAIVD010000024;XR_004388233 ncrna 625879971 LOC116906280 60S ribosomal protein L29-like 7 25319061 25319630 - 22301074;30032202 116906280 MODEL JAAIVD010000026;XM_032909164 XP_032765055 protein-coding 625879975 LOC116888737 olfactory receptor 13C3-like 1 102158320 102159273 + 22301074 116888737 MODEL JAAIVD010000025;XM_032890032 XP_032745923 protein-coding 625879978 Rad51c RAD51 paralog C ENCODES a protein that exhibits crossover junction DNA endonuclease activity (ortholog); four-way junction DNA binding (ortholog); INVOLVED IN DNA recombination (ortholog); DNA repair (ortholog); double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); breast carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 9 83364223 83389746 + 22301074;30032202 116908945 MODEL JAAIVD010000002;XM_032912402 XP_032768293 DNA repair protein RAD51 homolog 3 protein-coding 625879991 Egr1 early growth response 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cellular response to antibiotic (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN long term potentiation; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Alzheimer's disease (ortholog); aortic valve stenosis (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 15 9495054 9499032 - 30032202 116884584 MODEL JAAIVD010000010;XM_032885725 XP_032741616 early growth response protein 1 protein-coding 625879997 LOC116902445 60S ribosomal protein L34-like 5 158585172 158585758 + 116902445 MODEL JAAIVD010000023 pseudo 625879998 LOC116915169 U6 spliceosomal RNA 13 60639665 60639770 - 116915169 MODEL JAAIVD010000008;XR_004389831 snrna 625880001 LOC116902380 uncharacterized LOC116902380 5 154461064 154465572 + 116902380 MODEL JAAIVD010000023;XR_004388063;XR_004388064 ncrna 625880008 LOC116897306 uncharacterized LOC116897306 3 205009044 205081226 + 116897306 MODEL JAAIVD010000012;XR_004387411;XR_004387412 ncrna 625880017 Fmnl2 formin like 2 ASSOCIATED WITH Crohn's disease (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog) 5 30629565 30897394 + 22301074;30032202 116901409 MODEL JAAIVD010000023;XM_032903288;XM_032903289 XP_032759179;XP_032759180 formin-like protein 2 protein-coding 625880052 Cntnap1 contactin associated protein 1 ENCODES a protein that exhibits SH3 domain binding (ortholog); INVOLVED IN axonogenesis (ortholog); central nervous system myelination (ortholog); cytoskeleton organization (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease type 4E (ortholog); Congenital Hypomyelinating Neuropathy 3 (ortholog); congenital hypomyelinating neuropathy 3 (ortholog); FOUND IN axon (ortholog); glutamatergic synapse (ortholog); paranode region of axon (ortholog) 9 60474093 60487875 + 116910523 MODEL JAAIVD010000002;XM_032914427 XP_032770318 contactin-associated protein 1 protein-coding 625880080 LOC116883212 triosephosphate isomerase-like 14 44451752 44452539 + 116883212 MODEL JAAIVD010000009 pseudo 625880081 Rbms2 RNA binding motif single stranded interacting protein 2 1 155607955 155648437 - 22301074;30032202 116905874 MODEL JAAIVD010000025;XM_032908870;XR_004388573 XP_032764761 RNA-binding motif, single-stranded-interacting protein 2 protein-coding 625880101 LOC116907406 putative gustatory receptor clone PTE01 8 15614069 15615013 + 22301074;30032202 116907406 MODEL JAAIVD010000027;XM_032910363 XP_032766254 protein-coding 625880104 Pbx3 PBX homeobox 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); dorsal spinal cord development (ortholog); neuron development (ortholog); ASSOCIATED WITH Congenital Heart Defects, Multiple Types (ortholog); esophagus squamous cell carcinoma (ortholog); X-linked cone-rod dystrophy 1 (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) 5 1260615 1453402 + 22301074;30032202 116901117 MODEL JAAIVD010000023;XM_032902689;XM_032902690 XP_032758580;XP_032758581 pre-B-cell leukemia transcription factor 3 protein-coding 625880119 Myh11 myosin heavy chain 11 ENCODES a protein that exhibits cytoskeletal motor activity (ortholog); structural constituent of muscle (ortholog); INVOLVED IN cardiac muscle cell development (ortholog); elastic fiber assembly (ortholog); smooth muscle contraction (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute myeloid leukemia (ortholog); acute myelomonocytic leukemia (ortholog); FOUND IN brush border (ortholog); cytosol (ortholog); muscle myosin complex (ortholog) 9 7948489 8036694 + 22301074 116908978 MODEL JAAIVD010000002;XM_032912443;XM_032912444;XM_032912445;XM_032912446;XM_032912447 XP_032768334;XP_032768335;XP_032768336;XP_032768337;XP_032768338 myosin-11 protein-coding 625880180 LOC116903901 TRPM8 channel-associated factor 2-like 6 98274935 98277231 - 30032202 116903901 MODEL JAAIVD010000024;XM_032906670 XP_032762561 protein-coding 625880185 Cwf19l1 CWF19 like cell cycle control factor 1 ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 17 (ortholog); genetic disease (ortholog); intellectual disability (ortholog) 2 43642818 43666282 - 30032202 116891207 MODEL JAAIVD010000001;XM_032892035 XP_032747926 CWF19-like protein 1 protein-coding 625880203 Sbk2 SH3 domain binding kinase family member 2 2 177538283 177544984 - 22301074;30032202 116894546 MODEL JAAIVD010000001;XM_032896254 XP_032752145 serine/threonine-protein kinase SBK2 protein-coding 625880211 Ccdc169 coiled-coil domain containing 169 3 99264146 99293318 - 116895488 MODEL JAAIVD010000012;XM_032896747 XP_032752638 coiled-coil domain-containing protein 169 protein-coding 625880223 LOC116889000 heat shock cognate 71 kDa protein-like X 13777019 13777730 - 116889000 MODEL JAAIVD010000014 pseudo 625880224 LOC116912925 U6 spliceosomal RNA 11 36671360 36671466 + 116912925 MODEL JAAIVD010000006;XR_004389496 snrna 625880227 LOC116890572 small nucleolar RNA SNORA17 1 137185014 137185138 + 116890572 MODEL JAAIVD010000025 pseudo 625880228 LOC116890583 small nucleolar RNA SNORA17 1 235829915 235830050 - 116890583 MODEL JAAIVD010000025;XR_004386745 snorna 625880231 Actr1b actin related protein 1B ASSOCIATED WITH Duane retraction syndrome (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog) 4 112908796 112919006 - 116899296 MODEL JAAIVD010000003;XM_032900943 XP_032756834 beta-centractin protein-coding 625880246 Mvb12b multivesicular body subunit 12B ENCODES a protein that exhibits lipid binding (ortholog); ubiquitin binding (ortholog); INVOLVED IN regulation of epidermal growth factor receptor signaling pathway (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog); ESCRT I complex (ortholog) 5 1743099 1902579 + 22301074;30032202 116901118 MODEL JAAIVD010000023;XM_032902691;XM_032902692 XP_032758582;XP_032758583 protein-coding 625880263 Hebp1 heme binding protein 1 ENCODES a protein that exhibits heme binding (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 6 14276869 14305592 + 116903162 MODEL JAAIVD010000024;XM_032905529 XP_032761420 heme-binding protein 1 protein-coding 625880271 Crybb3 crystallin beta B3 ENCODES a protein that exhibits structural constituent of eye lens (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 22 multiple types (ortholog); genetic disease (ortholog) 16 40897265 40902101 + 30032202 116885817 MODEL JAAIVD010000004;XM_032887160 XP_032743051 beta-crystallin B3 protein-coding 625880280 LOC116895437 uncharacterized LOC116895437 3 68458719 68463033 - 116895437 MODEL JAAIVD010000012;XR_004387276 ncrna 625880285 LOC116902704 60S ribosomal protein L13-like 6 43041710 43042237 + 22301074;30032202 116902704 MODEL JAAIVD010000024;XM_032905058 XP_032760949 protein-coding 625880288 C6H3orf22 chromosome 6 C3orf22 homolog FOUND IN cytoplasm (ortholog) 6 56600770 56605220 - 116902727 MODEL JAAIVD010000024;XM_032905077 XP_032760968 uncharacterized protein C3orf22 homolog protein-coding 625880296 LOC116911369 uncharacterized LOC116911369 10 44132457 44138362 - 116911369 MODEL JAAIVD010000005;XR_004389323 ncrna 625880300 LOC116900126 olfactory receptor 50-like 5 14442492 14443430 + 22301074;30032202 116900126 MODEL JAAIVD010000023;XM_032901900 XP_032757791 protein-coding 625880303 LOC116887848 60S ribosomal protein L17-like 1 61306666 61307206 + 116887848 MODEL JAAIVD010000025 pseudo 625880304 Slc38a12 solute carrier family 38 member 12 ASSOCIATED WITH basal cell carcinoma (ortholog) 9 68858169 68914735 - 116909689 MODEL JAAIVD010000002;XM_032913351 XP_032769242 Tmem104 transmembrane protein 104 protein-coding 625880318 LOC116905641 snurportin-1-like 7 27538467 27539626 + 116905641 MODEL JAAIVD010000026 pseudo 625880319 LOC116915129 small nucleolar RNA SNORA17 13 9873805 9873933 + 116915129 MODEL JAAIVD010000008;XR_004389809 snorna 625880322 LOC116906712 uncharacterized LOC116906712 8 59987145 59990768 - 116906712 MODEL JAAIVD010000027;XR_004388765 ncrna 625880327 Grin3b glutamate ionotropic receptor NMDA type subunit 3B ENCODES a protein that exhibits calcium channel activity (ortholog); glycine binding (ortholog); ligand-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); INVOLVED IN cellular response to glycine (ortholog); ionotropic glutamate receptor signaling pathway (ortholog); monoatomic cation transmembrane transport (ortholog); PARTICIPATES IN excitatory synaptic transmission pathway; ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN hippocampal mossy fiber to CA3 synapse (ortholog); neuronal cell body (ortholog); neurotransmitter receptor complex (ortholog) 1 154899190 154905499 - 22301074;30032202 116905483 MODEL JAAIVD010000025;XM_032908484 XP_032764375 glutamate receptor ionotropic, NMDA 3B protein-coding 625880340 Il21 interleukin 21 ENCODES a protein that exhibits cytokine receptor binding (ortholog); interleukin-2 receptor binding (ortholog); INVOLVED IN cell maturation (ortholog); cellular response to virus (ortholog); germinal center B cell differentiation (ortholog); ASSOCIATED WITH Acute-On-Chronic Liver Failure (ortholog); allergic disease (ortholog); Animal Toxoplasmosis (ortholog); FOUND IN plasma membrane (ortholog) 3 116779438 116787031 + 30032202 116895517 MODEL JAAIVD010000012;XM_032896762 XP_032752653 interleukin-21 protein-coding 625880348 LOC116911232 60S ribosomal protein L9-like 10 23519877 23521947 - 116911232 MODEL JAAIVD010000005 pseudo 625880349 LOC116906196 Ig heavy chain V region 345-like 7 120985232 120985745 - 116906196 MODEL JAAIVD010000026 pseudo 625880350 LOC116904981 uncharacterized LOC116904981 7 50704882 50848520 + 116904981 MODEL JAAIVD010000026;XR_004388478 ncrna 625880354 Trnar-ccu transfer RNA arginine (anticodon CCU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 68687717 68687789 + 116910814 MODEL JAAIVD010000002 trna 625880355 Lcorl ligand dependent nuclear receptor corepressor like ENCODES a protein that exhibits histone methyltransferase binding (ortholog); INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Birth Weight (ortholog) 11 60045872 60177429 + 22301074;30032202 116912231 MODEL JAAIVD010000006;XM_032916191;XM_032916192;XM_032916193;XM_032916194;XM_032916195;XM_032916196;XM_032916197;XM_032916198;XM_032916199;XM_032916200;XM_032916202;XM_032916203;XM_032916204;XM_032916205;XM_032916206 XP_032772082;XP_032772083;XP_032772084;XP_032772085;XP_032772086;XP_032772087;XP_032772088;XP_032772089;XP_032772090;XP_032772091;XP_032772093;XP_032772094;XP_032772095;XP_032772096;XP_032772097 ligand-dependent nuclear receptor corepressor-like protein protein-coding 625880418 Armc6 armadillo repeat containing 6 INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); FOUND IN cytosol (ortholog) 13 12481933 12496737 - 22301074;30032202 116915089 MODEL JAAIVD010000008;XM_032919515;XM_032919516 XP_032775406;XP_032775407 armadillo repeat-containing protein 6 protein-coding 625880433 LOC116909022 olfactory receptor 1468-like 9 44691334 44692272 + 22301074;30032202 116909022 MODEL JAAIVD010000002;XM_032912498 XP_032768389 protein-coding 625880436 Hspa12b heat shock protein family A (Hsp70) member 12B INVOLVED IN angiogenesis (ortholog); endothelial cell migration (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); pulmonary edema (ortholog) 5 110859092 110872678 + 116901983 MODEL JAAIVD010000023;XM_032904230 XP_032760121 heat shock 70 kDa protein 12B protein-coding 625880453 Cfap184 cilia and flagella associated protein 184 11 68619601 68621923 - 30032202 116912775 MODEL JAAIVD010000006;XM_032916934 XP_032772825 Ccdc96 coiled-coil domain containing 96;coiled-coil domain-containing protein 96 protein-coding 625880459 LOC116886975 peptidyl-prolyl cis-trans isomerase G-like 18 39695121 39695826 - 116886975 MODEL JAAIVD010000013 pseudo 625880460 LOC116887858 cytochrome c oxidase assembly factor 6 homolog 1 227933828 227934727 - 116887858 MODEL JAAIVD010000025 pseudo 625880461 Klhdc3 kelch domain containing 3 ENCODES a protein that exhibits chromatin binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ubiquitin-dependent protein catabolic process via the C-end degron rule pathway (ortholog); FOUND IN chromatin (ortholog); Cul2-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) 4 83183715 83190048 + 22301074;30032202 116899100 MODEL JAAIVD010000003;XM_032900613;XM_032900614;XM_032900615 XP_032756504;XP_032756505;XP_032756506 kelch domain-containing protein 3 protein-coding 625880483 Mmaa metabolism of cobalamin associated A ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cobalamin metabolic process (ortholog); ASSOCIATED WITH cataract (ortholog); Congenital Abnormalities (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 17 20810866 20840221 + 22301074;30032202 116886248 MODEL JAAIVD010000011;XM_032887661;XM_032887662;XM_032887663;XM_032887664 XP_032743552;XP_032743553;XP_032743554;XP_032743555 methylmalonic aciduria type A protein, mitochondrial protein-coding 625880503 LOC116891317 transcription elongation factor SPT4-A-like 2 57224688 57225071 - 116891317 MODEL JAAIVD010000001 pseudo 625880504 Gal3st4 galactose-3-O-sulfotransferase 4 ENCODES a protein that exhibits galactose 3-O-sulfotransferase activity (ortholog); INVOLVED IN glycoprotein biosynthetic process (ortholog); FOUND IN membrane (ortholog) 16 16032730 16038819 + 22301074;30032202 116885731 MODEL JAAIVD010000004;XM_032887041 XP_032742932 protein-coding 625880512 LOC116905378 serine protease inhibitor A3B-like 7 115363245 115367306 + 116905378 MODEL JAAIVD010000026 pseudo 625880513 LOC116894974 small nucleolar RNA SNORA24 2 25272830 25272961 - 116894974 MODEL JAAIVD010000001;XR_004387165 snorna 625880516 LOC116906488 small nucleolar RNA SNORD127 7 78760593 78760677 + 116906488 MODEL JAAIVD010000026;XR_004388731 snorna 625880519 LOC116893065 extensin-like 2 38035436 38036443 - 116893065 MODEL JAAIVD010000001;XM_032895024 XP_032750915 protein-coding 625880522 LOC116911568 heat shock protein HSP 90-alpha-like 10 10973656 10975437 - 116911568 MODEL JAAIVD010000005 pseudo 625880523 LOC116888268 mitochondrial import receptor subunit TOM5 homolog X 128848177 128848332 + 30032202 116888268 MODEL JAAIVD010000014;XM_032889544 XP_032745435 protein-coding 625880526 L1td1 LINE1 type transposase domain containing 1 ENCODES a protein that exhibits sequence-specific mRNA binding (ortholog) 1 55785169 55790940 - 30032202 116891828 MODEL JAAIVD010000025;XM_032893231 XP_032749122 LINE-1 type transposase domain-containing protein 1 protein-coding 625880532 LOC116889262 uncharacterized LOC116889262 X 18272553 18301951 + 116889262 MODEL JAAIVD010000014;XR_004386370 ncrna 625880537 Atp6v1a ATPase H+ transporting V1 subunit A ENCODES a protein that exhibits guanyl nucleotide exchange factor activator activity (ortholog); proton transmembrane transporter activity (ortholog); proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to increased oxygen levels (ortholog); intracellular iron ion homeostasis (ortholog); ASSOCIATED WITH autosomal recessive cutis laxa type IID (ortholog); brain disease (ortholog); Cerebral Hemorrhage (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) 4 28977508 29032801 - 22301074;30032202 116898859 MODEL JAAIVD010000003;XM_032900224 XP_032756115 V-type proton ATPase catalytic subunit A protein-coding 625880556 Sftpd surfactant protein D ENCODES a protein that exhibits identical protein binding (ortholog); lipopolysaccharide binding (ortholog); monosaccharide binding (ortholog); INVOLVED IN lung alveolus development (ortholog); negative regulation of interleukin-2 production (ortholog); negative regulation of phagocytosis (ortholog); PARTICIPATES IN forkhead class A signaling pathway; surfactant homeostasis pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); adult respiratory distress syndrome (ortholog); asthma (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); multivesicular body (ortholog) 13 19689837 19703507 - 116914597 MODEL JAAIVD010000008;XM_032918958 XP_032774849 pulmonary surfactant-associated protein D protein-coding 625880568 LOC116893968 uncharacterized LOC116893968 2 99336776 99338538 - 116893968 MODEL JAAIVD010000001;XR_004387019 ncrna 625880573 LOC116910965 glyceraldehyde-3-phosphate dehydrogenase-like 10 85133477 85135465 + 116910965 MODEL JAAIVD010000005 pseudo 625880574 LOC116885674 60S ribosomal protein L19-like 16 28092444 28096027 + 116885674 MODEL JAAIVD010000004 pseudo 625880575 LOC116913031 small nucleolar RNA U3 11 49815279 49815349 + 116913031 MODEL JAAIVD010000006 pseudo 625880576 LOC116888309 uncharacterized LOC116888309 X 31954958 31967890 - 116888309 MODEL JAAIVD010000014;XR_004386302 ncrna 625880581 LOC116897625 small nucleolar RNA SNORD78 3 222789449 222789514 + 116897625 MODEL JAAIVD010000012;XR_004387606 snorna 625880584 Dnajc25 DnaJ heat shock protein family (Hsp40) member C25 1 92417900 92437460 - 30032202 116901553 MODEL JAAIVD010000025;XM_032903548 XP_032759439 dnaJ homolog subfamily C member 25 protein-coding 625880592 LOC116890957 60S ribosomal protein L36a-like 2 9985513 9985929 + 22301074;30032202 116890957 MODEL JAAIVD010000001;XM_032891614 XP_032747505 protein-coding 625880597 Zg16 zymogen granule protein 16 ENCODES a protein that exhibits peptidoglycan binding (ortholog); INVOLVED IN defense response to Gram-positive bacterium (ortholog); suppression of symbiont entry into host (ortholog); FOUND IN extracellular region (ortholog); Golgi lumen (ortholog); mucus layer (ortholog) 2 74842528 74844961 + 30032202 116891487 MODEL JAAIVD010000001;XM_032892592 XP_032748483 zymogen granule membrane protein 16 protein-coding 625880605 KEG97_t08 tRNA-Ala MT 5005 5073 - 64988241 trna 625880606 LOC116894082 olfactory receptor 52E1-like 2 103190183 103191121 + 22301074 116894082 MODEL JAAIVD010000001;XM_032895803 XP_032751694 protein-coding 625880609 Slc25a45 solute carrier family 25 member 45 ENCODES a protein that exhibits dimethylarginine transmembrane transporter activity (ortholog); N(6),N(6),N(6)-trimethyl-L-lysine transmembrane transporter activity (ortholog); INVOLVED IN carnitine biosynthetic process (ortholog); ASSOCIATED WITH melanoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog) 2 1810708 1818247 - 22301074;30032202 116890692 MODEL JAAIVD010000001;XM_032891110 XP_032747001 protein-coding 625880619 LOC116908112 olfactory receptor 7D4-like 8 16781861 16785075 + 22301074;30032202 116908112 MODEL JAAIVD010000027;XM_032911393 XP_032767284 protein-coding 625880624 Znf451 zinc finger protein 451 ENCODES a protein that exhibits SUMO ligase activity (ortholog); transcription corepressor activity (ortholog); transcription regulator inhibitor activity (ortholog); INVOLVED IN negative regulation of transcription initiation by RNA polymerase II (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); protein sumoylation (ortholog); FOUND IN nucleus (ortholog); PML body (ortholog) 4 110012171 110066854 - 30032202 116899268 MODEL JAAIVD010000003;XM_032900889;XM_032900890;XM_032900891 XP_032756780;XP_032756781;XP_032756782 E3 SUMO-protein ligase ZNF451 protein-coding 625880649 LOC116911986 ribosome biogenesis protein NSA2 homolog 11 44739387 44751773 - 116911986 MODEL JAAIVD010000006 pseudo 625880650 LOC116910919 mucosal pentraxin-like 10 52310653 52313780 - 30032202 116910919 MODEL JAAIVD010000005;XM_032914673 XP_032770564 protein-coding 625880654 LOC116892585 60S ribosomal protein L7a-like 2 171983230 171984057 + 116892585 MODEL JAAIVD010000001 pseudo 625880655 LOC116895968 WD repeat-containing protein 75-like 3 149095814 149101002 + 116895968 MODEL JAAIVD010000012 pseudo 625880656 Trnai-aau transfer RNA isoleucine (anticodon AAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42441239 42441312 - 116884184 MODEL JAAIVD010000009 trna 625880657 Csnk1g2 casein kinase 1 gamma 2 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN protein autophosphorylation (ortholog); protein phosphorylation (ortholog); PARTICIPATES IN Hedgehog signaling pathway; p53 signaling pathway; FOUND IN cytosol (ortholog) 1 154247407 154253628 - 22301074;30032202 116904966 MODEL JAAIVD010000025;XM_032907631;XM_032907642;XM_032907651;XM_032907658;XM_032907662 XP_032763522;XP_032763533;XP_032763542;XP_032763549;XP_032763553 casein kinase I protein-coding 625880680 LOC116891869 protein Tob2-like 2 13406230 13407379 + 116891869 MODEL JAAIVD010000001 pseudo 625880681 Xkr6 XK related 6 FOUND IN plasma membrane (ortholog) 12 60582294 60785575 - 30032202 116914037 MODEL JAAIVD010000007;XM_032918317 XP_032774208 XK-related protein 6 protein-coding 625880688 LOC116901525 60S ribosomal protein L19-like 5 51174697 51175276 + 116901525 MODEL JAAIVD010000023 pseudo 625880689 Fundc1 FUN14 domain containing 1 INVOLVED IN autophagy of mitochondrion (ortholog); mitochondrial fusion (ortholog); mitophagy (ortholog); PARTICIPATES IN mitochondrial autophagy pathway; ASSOCIATED WITH Hypoxia (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) X 4663804 4679310 - 30032202 116888756 MODEL JAAIVD010000014;XM_032890050 XP_032745941 FUN14 domain-containing protein 1 protein-coding 625880698 Lnx2 ligand of numb-protein X 2 ENCODES a protein that exhibits identical protein binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN neural precursor cell proliferation (ortholog); neuron differentiation (ortholog); FOUND IN plasma membrane (ortholog) 16 6794556 6858557 + 22301074;30032202 116885184 MODEL JAAIVD010000004;XM_032886399;XM_032886400;XM_032886401;XM_032886402 XP_032742290;XP_032742291;XP_032742292;XP_032742293 ligand of Numb protein X 2 protein-coding 625880719 LOC116887761 U6 spliceosomal RNA 18 23804072 23804182 + 116887761 MODEL JAAIVD010000013;XR_004386261 snrna 625880722 Egfr epidermal growth factor receptor ENCODES a protein that exhibits actin filament binding (ortholog); calmodulin binding (ortholog); chromatin binding (ortholog); INVOLVED IN astrocyte activation (ortholog); cell morphogenesis (ortholog); cell surface receptor signaling pathway (ortholog); PARTICIPATES IN altered epidermal growth factor/neuregulin signaling pathway; cetuximab pharmacodynamics pathway; E-cadherin signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); adenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cell junction (ortholog) 11 85178228 85342818 + 22301074;30032202 116912206 MODEL JAAIVD010000006;XM_032916153 XP_032772044 protein-coding 625880754 LOC116895378 60S ribosomal protein L15-like 3 55031291 55031889 + 116895378 MODEL JAAIVD010000012 pseudo 625880755 Ptprg protein tyrosine phosphatase receptor type G ENCODES a protein that exhibits identical protein binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN negative regulation of epithelial cell migration (ortholog); negative regulation of neuron projection development (ortholog); regulation of homophilic cell adhesion (ortholog); ASSOCIATED WITH Stomach Neoplasms (ortholog); FOUND IN extracellular region (ortholog) 12 81653555 82324582 + 22301074 116913717 MODEL JAAIVD010000007;XM_032918016;XM_032918017 XP_032773907;XP_032773908 receptor-type tyrosine-protein phosphatase gamma protein-coding 625880792 LOC116913002 small nucleolar RNA SNORA17 11 93767422 93767529 + 116913002 MODEL JAAIVD010000006 pseudo 625880793 LOC116894394 keratin-associated protein 20-2-like 2 157157517 157157666 + 116894394 MODEL JAAIVD010000001;XM_032896102 XP_032751993 protein-coding 625880796 Mecp2 methyl-CpG binding protein 2 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); associative learning (ortholog); behavioral fear response (ortholog); PARTICIPATES IN DNA modification pathway; ASSOCIATED WITH Angelman syndrome (ortholog); Animal Disease Models (ortholog); anxiety disorder (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); cytoplasm (ortholog) X 128480073 128534447 + 22301074;30032202 116888366 MODEL JAAIVD010000014;XM_032889633;XM_032889634;XM_032889635 XP_032745524;XP_032745525;XP_032745526 methyl-CpG-binding protein 2 protein-coding 625880810 Clasp2 cytoplasmic linker associated protein 2 ENCODES a protein that exhibits actin filament binding (ortholog); dystroglycan binding (ortholog); microtubule binding (ortholog); INVOLVED IN basement membrane organization (ortholog); cell migration (ortholog); cellular response to insulin stimulus (ortholog); FOUND IN axonal growth cone (ortholog); basal cortex (ortholog); cell cortex (ortholog) 8 104602868 104785472 + 30032202 116907804 MODEL JAAIVD010000027;XM_032910949;XM_032910950;XM_032910952;XM_032910953;XM_032910954;XM_032910955;XM_032910956;XM_032910957;XM_032910958;XM_032910959;XM_032910960;XM_032910961;XM_032910962;XM_032910963;XM_032910964;XM_032910965;XM_032910966;XM_032910968;XM_032910969;XM_032910970;XM_032910971;XM_032910972;XM_032910973;XM_032910974;XM_032910975;XM_032910976;XM_032910977 XP_032766840;XP_032766841;XP_032766843;XP_032766844;XP_032766845;XP_032766846;XP_032766847;XP_032766848;XP_032766849;XP_032766850;XP_032766851;XP_032766852;XP_032766853;XP_032766854;XP_032766855;XP_032766856;XP_032766857;XP_032766859;XP_032766860;XP_032766861;XP_032766862;XP_032766863;XP_032766864;XP_032766865;XP_032766866;XP_032766867;XP_032766868 CLIP-associating protein 2 protein-coding 625880901 LOC116913920 neugrin-like 12 29604825 29605569 - 116913920 MODEL JAAIVD010000007 pseudo 625880902 LOC116885088 U6 spliceosomal RNA 15 67380895 67380998 + 116885088 MODEL JAAIVD010000010;XR_004385959 snrna 625880905 Cttn cortactin ENCODES a protein that exhibits Arp2/3 complex binding (ortholog); profilin binding (ortholog); proline-rich region binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell motility (ortholog); dendritic spine maintenance (ortholog); PARTICIPATES IN E-cadherin signaling pathway; fibroblast growth factor signaling pathway; N-cadherin signaling pathway; ASSOCIATED WITH Leukoplakia (ortholog); squamous cell carcinoma (ortholog); systemic juvenile rheumatoid arthritis (ortholog); FOUND IN actin filament (ortholog); cell cortex (ortholog); cell junction (ortholog) 2 5258955 5289210 + 30032202 116890823 MODEL JAAIVD010000001;XM_032891327;XM_032891328;XM_032891330 XP_032747218;XP_032747219;XP_032747221 src substrate cortactin protein-coding 625880928 Anapc15 anaphase promoting complex subunit 15 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); FOUND IN anaphase-promoting complex (ortholog) 2 100166687 100194049 + 22301074;30032202 116891774 MODEL JAAIVD010000001;XM_032893104;XM_032893105;XM_032893107;XM_032893108;XM_032893109;XM_032893110;XM_032893111;XM_032893112;XM_032893113;XM_032893114;XM_032893115;XM_032893116 XP_032748995;XP_032748996;XP_032748998;XP_032748999;XP_032749000;XP_032749001;XP_032749002;XP_032749003;XP_032749004;XP_032749005;XP_032749006;XP_032749007 anaphase-promoting complex subunit 15 protein-coding 625880967 Ncr3 natural cytotoxicity triggering receptor 3 ENCODES a protein that exhibits identical protein binding (ortholog); immune receptor activity (ortholog); INVOLVED IN immune response-activating cell surface receptor signaling pathway (ortholog); natural killer cell activation (ortholog); NK T cell activation (ortholog); ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); Chronic Hepatitis C (ortholog); COVID-19 (ortholog); FOUND IN plasma membrane (ortholog) 18 7777747 7782863 + 30032202 116887127 MODEL JAAIVD010000013;XM_032888674 XP_032744565 protein-coding 625880975 Znf133 zinc finger protein 133 INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog) 5 124096177 124113541 + 22301074;30032202 116902045 MODEL JAAIVD010000023;XM_032904330 XP_032760221 protein-coding 625880982 Tnfrsf13c TNF receptor superfamily member 13C INVOLVED IN B cell costimulation (ortholog); B cell homeostasis (ortholog); positive regulation of B cell proliferation (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); common variable immunodeficiency (ortholog); common variable immunodeficiency 2 (ortholog); FOUND IN external side of plasma membrane (ortholog) 1 251951579 251952857 - 22301074;30032202 116890157 MODEL JAAIVD010000025;XM_032890891;XM_032890892 XP_032746782;XP_032746783 tumor necrosis factor receptor superfamily member 13C protein-coding 625880991 LOC116886965 SUMO-conjugating enzyme UBC9-like 18 34813965 34822962 + 116886965 MODEL JAAIVD010000013 pseudo 625880992 C8H19orf38 chromosome 8 C19orf38 homolog 8 17797966 17815068 + 116907290 MODEL JAAIVD010000027;XM_032910239 XP_032766130 protein HIDE1 protein-coding 625881002 Ssc5d scavenger receptor cysteine rich family member with 5 domains ENCODES a protein that exhibits extracellular matrix binding (ortholog); fibronectin binding (ortholog); laminin binding (ortholog); INVOLVED IN defense response (ortholog); defense response to Gram-negative bacterium (ortholog); defense response to Gram-positive bacterium (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) 2 177510492 177527669 + 22301074 116893447 MODEL JAAIVD010000001;XM_032895215 XP_032751106 soluble scavenger receptor cysteine-rich domain-containing protein SSC5D protein-coding 625881019 Cnot9 CCR4-NOT transcription complex subunit 9 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); kinase binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); negative regulation of intracellular estrogen receptor signaling pathway (ortholog); positive regulation of epidermal growth factor receptor signaling pathway (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN CCR4-NOT complex (ortholog); P-body (ortholog); protein-containing complex (ortholog) 4 147949738 147973790 + 30032202 116899503 MODEL JAAIVD010000003;XM_032901347;XM_032901348 XP_032757238;XP_032757239 protein-coding 625881036 Hbp1 HMG-box transcription factor 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of lipid transport (ortholog); negative regulation of reactive oxygen species biosynthetic process (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH COVID-19 (ortholog); osteoarthritis (ortholog); FOUND IN nuclear speck (ortholog) 7 45319058 45343958 - 22301074;30032202 116904954 MODEL JAAIVD010000026;XM_032907610;XM_032907611 XP_032763501;XP_032763502 HMG box-containing protein 1 protein-coding 625881056 Ndn necdin, MAGE family member ENCODES a protein that exhibits gamma-tubulin binding (ortholog); promoter-specific chromatin binding (ortholog); INVOLVED IN axon extension (ortholog); axonal fasciculation (ortholog); axonogenesis (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); autistic disorder (ortholog); Birth Weight (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 137595414 137597068 - 30032202 116892017 MODEL JAAIVD010000001;XM_032893480 XP_032749371 necdin protein-coding 625881061 LOC116895523 ribosome biogenesis protein NSA2 homolog 3 120082444 120083286 + 116895523 MODEL JAAIVD010000012 pseudo 625881062 LOC116889877 prefoldin subunit 1-like 1 156093255 156093597 + 116889877 MODEL JAAIVD010000025 pseudo 625881063 Aqp11 aquaporin 11 ENCODES a protein that exhibits glycerol channel activity (ortholog); hydrogen peroxide channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN endosomal lumen acidification (ortholog); glycerol transmembrane transport (ortholog); glycoprotein biosynthetic process (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); dendrite (ortholog) 2 96051846 96062029 - 22301074;30032202 116891707 MODEL JAAIVD010000001;XM_032892972 XP_032748863 aquaporin-11 protein-coding 625881070 LOC116902652 U4 spliceosomal RNA 5 137910036 137910177 - 116902652 MODEL JAAIVD010000023;XR_004388217 snrna 625881073 LOC116900013 E3 ubiquitin-protein ligase RNF138-like 5 10402192 10402848 + 116900013 MODEL JAAIVD010000023 pseudo 625881074 LOC116889736 phosphate import ATP-binding protein PstB-like 22301074;30032202 116889736 MODEL JAAIVD010000071;XM_032890608 XP_032746499 protein-coding 625881075 LOC116909104 caspase-14-like 9 867640 871966 - 22301074 116909104 MODEL JAAIVD010000002;XM_032912579 XP_032768470 protein-coding 625881086 Vps35 VPS35 retromer complex component ENCODES a protein that exhibits D1 dopamine receptor binding (ortholog); INVOLVED IN endocytic recycling (ortholog); lysosome organization (ortholog); mitochondrial fragmentation involved in apoptotic process (ortholog); PARTICIPATES IN altered retromer-mediated pathway; Parkinson's disease pathway; retromer-mediated pathway; ASSOCIATED WITH genetic disease (ortholog); late onset Parkinson's disease (ortholog); Parkinson's disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dopaminergic synapse (ortholog) 17 14458041 14492740 + 22301074;30032202 116886042 MODEL JAAIVD010000011;XM_032887347 XP_032743238 vacuolar protein sorting-associated protein 35 protein-coding 625881107 LOC116913729 olfactory receptor 11H7-like 12 72587087 72588030 - 116913729 MODEL JAAIVD010000007 pseudo 625881108 Frmd6 FERM domain containing 6 INVOLVED IN apical constriction (ortholog); intracellular protein localization (ortholog); regulation of actin filament-based process (ortholog); ASSOCIATED WITH asthma (ortholog); FOUND IN apical junction complex (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) 7 84532594 84568379 + 22301074;30032202 116905135 MODEL JAAIVD010000026;XM_032907895;XM_032907897 XP_032763786;XP_032763788 FERM domain-containing protein 6 protein-coding 625881127 Lrrc58 leucine rich repeat containing 58 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); regulation of taurine biosynthetic process (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog) 4 22832806 22846229 + 22301074 116898836 MODEL JAAIVD010000003;XM_032900189 XP_032756080 leucine-rich repeat-containing protein 58 protein-coding 625881135 LOC116907346 olfactory receptor 151-like 8 33895799 33906674 - 116907346 MODEL JAAIVD010000027 pseudo 625881136 Bad BCL2 associated agonist of cell death ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); cysteine-type endopeptidase activator activity (ortholog); lipid binding (ortholog); INVOLVED IN ADP metabolic process (ortholog); apoptotic process (ortholog); apoptotic signaling pathway (ortholog); PARTICIPATES IN adenosine signaling pathway; ceramide signaling pathway; endometrial cancer pathway; ASSOCIATED WITH acute kidney failure (ortholog); Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial outer membrane (ortholog) 2 844289 853573 - 22301074;30032202 116894816 MODEL JAAIVD010000001;XM_032896485;XM_032896486 XP_032752376;XP_032752377 bcl2-associated agonist of cell death protein-coding 625881147 Prr27 proline rich 27 11 1114140 1126852 - 30032202 116912633 MODEL JAAIVD010000006;XM_032916750 XP_032772641 proline-rich protein 27 protein-coding 625881155 LOC116899790 small nucleolar RNA SNORA71 4 38611640 38611772 + 116899790 MODEL JAAIVD010000003;XR_004387796 snorna 625881158 LOC116902584 small nucleolar RNA SNORA17 5 30286214 30286340 + 116902584 MODEL JAAIVD010000023;XR_004388176 snorna 625881161 LOC116906037 D-3-phosphoglycerate dehydrogenase-like 7 39657608 39659071 - 116906037 MODEL JAAIVD010000026 pseudo 625881162 LOC116884336 high mobility group protein B1-like 15 52675962 52676577 - 116884336 MODEL JAAIVD010000010 pseudo 625881163 LOC116913284 60 kDa heat shock protein, mitochondrial-like 12 88695228 88731560 + 22301074;30032202 116913284 MODEL JAAIVD010000007;XM_032917412 XP_032773303 protein-coding 625881168 LOC116911757 prohibitin-like 10 74361935 74362751 + 116911757 MODEL JAAIVD010000005 pseudo 625881169 Slbp stem-loop histone mRNA binding protein ENCODES a protein that exhibits histone pre-mRNA stem-loop binding (ortholog); identical protein binding (ortholog); mRNA binding (ortholog); INVOLVED IN cap-dependent translational initiation (ortholog); mRNA 3'-end processing by stem-loop binding and cleavage (ortholog); mRNA transport (ortholog); ASSOCIATED WITH coloboma (ortholog); optic atrophy (ortholog); Retinal Dysplasia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); histone pre-mRNA 3'end processing complex (ortholog) 11 71188314 71198481 + 30032202 116912590 MODEL JAAIVD010000006;XM_032916708 XP_032772599 histone RNA hairpin-binding protein;stem-loop binding protein protein-coding 625881181 Znf76 zinc finger protein 76 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN chromatin (ortholog) 18 5651840 5680922 - 30032202 116886864 MODEL JAAIVD010000013;XM_032888319;XM_032888320 XP_032744210;XP_032744211 protein-coding 625881202 Dhx15 DEAH-box helicase 15 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); RNA binding (ortholog); RNA helicase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); defense response to bacterium (ortholog); defense response to virus (ortholog); PARTICIPATES IN ribosome biogenesis pathway; spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); epilepsy (ortholog); FOUND IN nuclear speck (ortholog); U12-type spliceosomal complex (ortholog); U2-type post-mRNA release spliceosomal complex (ortholog) 11 53946497 53984134 + 22301074;30032202 116912821 MODEL JAAIVD010000006;XM_032917002 XP_032772893 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 protein-coding 625881220 Ctsd cathepsin D ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); aspartic-type peptidase activity (ortholog); endopeptidase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); epithelial tube branching involved in lung morphogenesis (ortholog); execution phase of apoptosis (ortholog); PARTICIPATES IN ceramide signaling pathway; chaperone mediated autophagy pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); atherosclerosis (ortholog); FOUND IN cytosol (ortholog); endosome lumen (ortholog); endosome membrane (ortholog) 2 7091289 7103344 + 22301074;30032202 116890847 MODEL JAAIVD010000001;XM_032891390 XP_032747281 protein-coding 625881233 Slf1 SMC5/6 complex localization factor 1 ENCODES a protein that exhibits protein-containing complex binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN DNA damage response (ortholog); positive regulation of double-strand break repair (ortholog); positive regulation of maintenance of mitotic sister chromatid cohesion (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nuclear inclusion body (ortholog) 3 219750995 219838565 + 22301074;30032202 116897349 MODEL JAAIVD010000012;XM_032899107 XP_032754998 SMC5-SMC6 complex localization factor 1;SMC5-SMC6 complex localization factor protein 1 protein-coding 625881258 Zbtb18 zinc finger and BTB domain containing 18 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cerebellum development (ortholog); cerebral cortex development (ortholog); hippocampus development (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder (ortholog); autosomal dominant intellectual developmental disorder 22 (ortholog); Developmental Disabilities (ortholog); FOUND IN heterochromatin (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) 10 55961185 55969474 + 22301074;30032202 116911000 MODEL JAAIVD010000005;XM_032914718;XM_032914719;XM_032914720;XM_032914721;XM_032914722;XM_032914724;XM_032914725;XM_032914726 XP_032770609;XP_032770610;XP_032770611;XP_032770612;XP_032770613;XP_032770615;XP_032770616;XP_032770617 zinc finger and BTB domain-containing protein 18 protein-coding 625881290 LOC116897452 U6 spliceosomal RNA 3 1954382 1954482 + 116897452 MODEL JAAIVD010000012 pseudo 625881291 LOC116896117 small proline-rich protein 2I-like 3 807547 807765 + 22301074 116896117 MODEL JAAIVD010000012;XM_032897080 XP_032752971 protein-coding 625881294 LOC116906455 small nucleolar RNA SNORA17 7 59315084 59315216 + 116906455 MODEL JAAIVD010000026;XR_004388711 snorna 625881297 Zbtb6 zinc finger and BTB domain containing 6 FOUND IN nucleoplasm (ortholog) 5 15193001 15211523 - 22301074;30032202 116901354 MODEL JAAIVD010000023;XM_032903204;XM_032903205 XP_032759095;XP_032759096 zinc finger and BTB domain-containing protein 6 protein-coding 625881306 LOC116904714 small nucleolar RNA SNORA17 6 96780525 96780654 - 116904714 MODEL JAAIVD010000024;XR_004388408 snorna 625881309 Necap1 NECAP endocytosis associated 1 INVOLVED IN endocytosis (ortholog); presynaptic endocytosis (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 21 (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN clathrin vesicle coat (ortholog); clathrin-coated pit (ortholog); presynapse (ortholog) 6 24214058 24227920 - 22301074;30032202 116903306 MODEL JAAIVD010000024;XM_032905733 XP_032761624 adaptin ear-binding coat-associated protein 1 protein-coding 625881321 Rtl6 retrotransposon Gag like 6 ASSOCIATED WITH substance-related disorder (ortholog) 1 253945473 253950568 - 116914555 MODEL JAAIVD010000025;XM_032918909 XP_032774800 retrotransposon Gag-like protein 6 protein-coding 625881326 Galntl6 polypeptide N-acetylgalactosaminyltransferase like 6 ENCODES a protein that exhibits polypeptide N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation via N-acetyl-galactosamine (ortholog) 13 30000483 31121571 + 30032202 116914788 MODEL JAAIVD010000008;XM_032919234 XP_032775125 polypeptide N-acetylgalactosaminyltransferase-like 6 protein-coding 625881342 LOC116904456 protein SET-like 6 130683439 130686677 - 116904456 MODEL JAAIVD010000024 pseudo 625881343 Rab21 RAB21, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); positive regulation of dendrite morphogenesis (ortholog); positive regulation of early endosome to late endosome transport (ortholog); ASSOCIATED WITH obesity (ortholog); FOUND IN cytoplasmic side of early endosome membrane (ortholog); cytoplasmic side of plasma membrane (ortholog); endosome (ortholog) 1 193443644 193471399 - 22301074 116909015 MODEL JAAIVD010000025;XM_032912492 XP_032768383 ras-related protein Rab-21 protein-coding 625881354 LOC116893122 proteasome activator complex subunit 2-like 2 74803050 74803745 - 116893122 MODEL JAAIVD010000001 pseudo 625881355 Acta2 actin alpha 2, smooth muscle ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN cellular response to transforming growth factor beta stimulus (ortholog); glomerular mesangial cell development (ortholog); juxtaglomerular apparatus development (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH aortic disease (ortholog); aortic dissection (ortholog); Breast Neoplasms (ortholog); FOUND IN actin cytoskeleton (ortholog); basement membrane (ortholog); cytoplasm (ortholog) 2 33843965 33854096 - 3375082 116891101 MODEL JAAIVD010000001;X06801;XM_032891814 CAA29957;XP_032747705 AA 1-377;actin, aortic smooth muscle;vascular alpha-actin protein-coding 625881367 Esyt2 extended synaptotagmin 2 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); identical protein binding (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog) 7 119686542 119780712 - 22301074 116905402 MODEL JAAIVD010000026;XM_032908358;XM_032908359;XM_032908360;XM_032908361 XP_032764249;XP_032764250;XP_032764251;XP_032764252 extended synaptotagmin-2 protein-coding 625881402 LOC116887915 CDGSH iron-sulfur domain-containing protein 3, mitochondrial-like X 55310020 55310615 - 116887915 MODEL JAAIVD010000014 pseudo 625881403 Zwint ZW10 interacting kinetochore protein INVOLVED IN establishment of localization in cell (ortholog); homologous chromosome orientation in meiotic metaphase I (ortholog); mitotic sister chromatid segregation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) 18 14328491 14331050 - 22301074;30032202 116886949 MODEL JAAIVD010000013;XM_032888448 XP_032744339 ZW10 interactor protein-coding 625881414 LOC116913489 kelch repeat and BTB domain-containing protein 7-like 12 44892096 44893733 - 22301074 116913489 MODEL JAAIVD010000007;XM_032917689 XP_032773580 protein-coding 625881418 LOC116888941 hypoxanthine-guanine phosphoribosyltransferase-like X 2573765 2578249 + 116888941 MODEL JAAIVD010000014 pseudo 625881419 Ulk1 unc-51 like autophagy activating kinase 1 ENCODES a protein that exhibits GTPase binding (ortholog); Hsp90 protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); axon extension (ortholog); PARTICIPATES IN autophagy pathway; mitochondrial autophagy pathway; mTOR signaling pathway; ASSOCIATED WITH metabolic dysfunction-associated steatohepatitis (ortholog); mucositis (ortholog); Osteoarthritis, Experimental (ortholog); FOUND IN Atg1/ULK1 kinase complex (ortholog); autophagosome (ortholog); autophagosome membrane (ortholog) 16 43533436 43560100 + 22301074;30032202 116885322 MODEL JAAIVD010000004;XM_032886586;XM_032886587 XP_032742477;XP_032742478 serine/threonine-protein kinase ULK1 protein-coding 625881453 Asb3 ankyrin repeat and SOCS box containing 3 INVOLVED IN gene expression (ortholog); host-mediated modulation of intestinal microbiota composition (ortholog); inflammatory response (ortholog) 11 98489395 98547124 + 22301074;30032202 116912511 MODEL JAAIVD010000006;XM_032916598 XP_032772489 ankyrin repeat and SOCS box protein 3 protein-coding 625881467 Agbl4 AGBL carboxypeptidase 4 ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); tubulin binding (ortholog); INVOLVED IN anterograde axonal transport of mitochondrion (ortholog); axonal transport (ortholog); C-terminal protein deglutamylation (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); prostate cancer (ortholog); substance-related disorder (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); cytosol (ortholog) 1 43084137 44333848 + 22301074 116898919 MODEL JAAIVD010000025;XM_032900331 XP_032756222 ATP/GTP binding protein like 4;cytosolic carboxypeptidase 6 protein-coding 625881484 Cebpzos CEBPZ opposite strand FOUND IN mitochondrion (ortholog) 7 14311940 14316590 - 116905896 MODEL JAAIVD010000026;XM_032908885;XM_032908886;XM_032908887 XP_032764776;XP_032764777;XP_032764778 protein CEBPZOS protein-coding 625881499 Lrg1 leucine rich alpha-2-glycoprotein 1 ENCODES a protein that exhibits transforming growth factor beta receptor binding (ortholog); type I transforming growth factor beta receptor binding (ortholog); type II transforming growth factor beta receptor binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); keratinocyte migration (ortholog); leukocyte adhesion to vascular endothelial cell (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Colonic Neoplasms (ortholog); Drug Hypersensitivity Syndrome (ortholog); FOUND IN extracellular region (ortholog) 4 87508474 87510741 - 22301074;30032202 116899171 MODEL JAAIVD010000003;XM_032900740 XP_032756631 leucine-rich alpha-2-glycoprotein protein-coding 625881505 Cplx2 complexin 2 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); SNARE binding (ortholog); INVOLVED IN positive regulation of synaptic plasticity (ortholog); regulation of synaptic vesicle fusion to presynaptic active zone membrane (ortholog); synaptic vesicle exocytosis (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); psychotic disorder (ortholog); schizophrenia (ortholog); FOUND IN calyx of Held (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) 14 72666583 72739209 + 22301074;30032202 116883278 MODEL JAAIVD010000009;XM_032884266;XM_032884267;XM_032884268 XP_032740157;XP_032740158;XP_032740159 complexin-2 protein-coding 625881518 LOC116908270 prohibitin-like 8 111114716 111116309 - 22301074;30032202 116908270 MODEL JAAIVD010000027;XM_032911519 XP_032767410 protein-coding 625881522 Shoc2 SHOC2 leucine rich repeat scaffold protein ENCODES a protein that exhibits protein phosphatase 1 binding (ortholog); protein phosphatase binding (ortholog); INVOLVED IN cellular response to growth hormone stimulus (ortholog); negative regulation of keratinocyte differentiation (ortholog); negative regulation of neural precursor cell proliferation (ortholog); ASSOCIATED WITH atopic dermatitis (ortholog); familial hypertrophic cardiomyopathy (ortholog); Funnel Chest (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 2 53382232 53464612 + 22301074 116891290 MODEL JAAIVD010000001;XM_032892195;XM_032892196 XP_032748086;XP_032748087 leucine-rich repeat protein SHOC-2 protein-coding 625881538 LOC116904428 inosine-5'-monophosphate dehydrogenase 2-like 6 115061237 115062786 - 116904428 MODEL JAAIVD010000024 pseudo 625881539 Dsn1 DSN1 component of MIS12 kinetochore complex INVOLVED IN skeletal muscle satellite cell proliferation (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN fibrillar center (ortholog); kinetochore (ortholog); MIS12/MIND type complex (ortholog) 5 136333158 136343156 - 22301074;30032202 116902215 MODEL JAAIVD010000023;XM_032904615;XM_032904617;XM_032904618 XP_032760506;XP_032760508;XP_032760509 kinetochore-associated protein DSN1 homolog protein-coding 625881560 Oca2 OCA2 melanosomal transmembrane protein ENCODES a protein that exhibits chloride channel activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cell population proliferation (ortholog); developmental pigmentation (ortholog); lysosomal lumen pH elevation (ortholog); ASSOCIATED WITH actinic keratosis (ortholog); Albinism (ortholog); basal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); endosome membrane (ortholog); lysosomal membrane (ortholog) 2 142668100 142961049 - 22301074;30032202 116894306 MODEL JAAIVD010000001;XM_032896002;XM_032896003 XP_032751893;XP_032751894 P protein protein-coding 625881591 Nek5 NIMA related kinase 5 ENCODES a protein that exhibits protein kinase activity (ortholog); INVOLVED IN positive regulation of striated muscle cell differentiation (ortholog); FOUND IN cilium (ortholog); sperm flagellum (ortholog) 13 64304715 64348172 + 22301074;30032202 116914539 MODEL JAAIVD010000008;XM_032918870 XP_032774761 serine/threonine-protein kinase Nek5 protein-coding 625881613 LOC116884134 U6 spliceosomal RNA 14 62883898 62884006 + 116884134 MODEL JAAIVD010000009;XR_004385857 snrna 625881616 LOC116910612 olfactory receptor 2T2-like 9 39753255 39754208 + 22301074 116910612 MODEL JAAIVD010000002;XM_032914559 XP_032770450 protein-coding 625881619 LOC116904928 gem-associated protein 8-like 7 76186612 76187298 + 116904928 MODEL JAAIVD010000026 pseudo 625881620 Lage3 L antigen family member 3 ASSOCIATED WITH Galloway-Mowat syndrome (ortholog); Galloway-Mowat syndrome 2 (ortholog); FOUND IN cytoplasm (ortholog); EKC/KEOPS complex (ortholog); nuclear body (ortholog) X 128358559 128359993 - 30032202 116889164 MODEL JAAIVD010000014;XM_032890332 XP_032746223 EKC/KEOPS complex subunit LAGE3 protein-coding 625881627 LOC116895710 UBX domain-containing protein 1-like 3 215397929 215398865 + 116895710 MODEL JAAIVD010000012 pseudo 625881628 LOC116913009 small nucleolar RNA SNORA26 11 30878340 30878460 + 116913009 MODEL JAAIVD010000006;XR_004389563 snorna 625881631 Wdr91 WD repeat domain 91 ENCODES a protein that exhibits phosphatidylinositol 3-kinase inhibitor activity (ortholog); INVOLVED IN early endosome to late endosome transport (ortholog); regulation of protein catabolic process (ortholog); ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytosol (ortholog); early endosome membrane (ortholog); endosome membrane (ortholog) 6 104744496 104774368 + 22301074;30032202 116903970 MODEL JAAIVD010000024;XM_032906770 XP_032762661 WD repeat-containing protein 91 protein-coding 625881650 LOC116897436 U6 spliceosomal RNA 3 120325971 120326073 - 116897436 MODEL JAAIVD010000012;XR_004387475 snrna 625881653 LOC116910388 E3 SUMO-protein ligase NSE2-like 9 91554666 91555871 + 116910388 MODEL JAAIVD010000002 pseudo 625881654 Mutyh mutY DNA glycosylase ENCODES a protein that exhibits DNA N-glycosylase activity (ortholog); MutLalpha complex binding (ortholog); MutLbeta complex binding (ortholog); INVOLVED IN negative regulation of necroptotic process (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); breast carcinoma (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) 1 40451042 40455829 + 22301074;30032202 116898510 MODEL JAAIVD010000025;XM_032899741 XP_032755632 adenine DNA glycosylase protein-coding 625881673 Cfap96 cilia and flagella associated protein 96 ASSOCIATED WITH developmental and epileptic encephalopathy 1 (ortholog); intellectual disability (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); centrosome (ortholog); cytoplasmic microtubule (ortholog) 13 41916101 41940866 + 30032202 116914415 MODEL JAAIVD010000008;XM_032918675;XM_032918676 XP_032774566;XP_032774567 C13H4orf47 UPF0602 protein C4orf47 homolog;chromosome 13 C4orf47 homolog protein-coding 625881688 LOC116891516 sulfotransferase 1A1 2 75228188 75230886 + 22301074;30032202 116891516 MODEL JAAIVD010000001;XM_032892654 XP_032748545 protein-coding 625881699 Purb purine rich element binding protein B ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 11 75400982 75405474 - 22301074;30032202 116912907 MODEL JAAIVD010000006;XM_032917165 XP_032773056 transcriptional activator protein Pur-beta protein-coding 625881704 LOC116901807 uncharacterized LOC116901807 5 97499767 97505496 - 116901807 MODEL JAAIVD010000023;XM_032903967;XR_004388024 XP_032759858 uncharacterized protein LOC116901807 protein-coding 625881714 LOC116907552 nucleoside diphosphate kinase B-like 8 89905926 89906387 - 22301074;30032202 116907552 MODEL JAAIVD010000027;XM_032910574 XP_032766465 protein-coding 625881717 Cdc50a cell division cycle 50 P4-ATPase accessory subunit A ENCODES a protein that exhibits aminophospholipid flippase activity (ortholog); structural molecule activity (ortholog); INVOLVED IN aminophospholipid transport (ortholog); endosomal transport (ortholog); phospholipid translocation (ortholog); FOUND IN early endosome membrane (ortholog); endoplasmic reticulum (ortholog); late endosome membrane (ortholog) 8 74040659 74064398 - 30032202 116906563 MODEL JAAIVD010000027;XM_032909276 XP_032765167 Tmem30a cell cycle control protein 50A;transmembrane protein 30A APPROVED protein-coding 625881728 LOC116911945 elongation factor 1-alpha 1-like 11 57399046 57400573 - 116911945 MODEL JAAIVD010000006 pseudo 625881729 LOC116895869 proteasomal ubiquitin receptor ADRM1-like 3 104119027 104120171 - 116895869 MODEL JAAIVD010000012 pseudo 625881730 LOC116888123 ribosome biogenesis protein NSA2 homolog 1 70356979 70357907 - 116888123 MODEL JAAIVD010000025 pseudo 625881731 LOC116883350 cyclic AMP-dependent transcription factor ATF-7 1 260464488 260552506 + 30032202 116883350 MODEL JAAIVD010000025;XM_032884432 XP_032740323 protein-coding 625881747 LOC116889136 60S ribosomal protein L39-like 1 4230830 4231020 - 22301074;30032202 116889136 MODEL JAAIVD010000025;XM_032890310 XP_032746201 protein-coding 625881751 LOC116905152 40S ribosomal protein S10-like 7 85948295 85948825 - 116905152 MODEL JAAIVD010000026 pseudo 625881752 LOC116892981 zinc finger protein 501-like 1 63972267 63979639 + 30032202 116892981 MODEL JAAIVD010000025;XM_032894973 XP_032750864 protein-coding 625881757 LOC116889455 U1 spliceosomal RNA X 70530271 70530424 - 116889455 MODEL JAAIVD010000014 pseudo 625881758 Znhit6 zinc finger HIT-type containing 6 ENCODES a protein that exhibits ATPase binding (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN box C/D snoRNP assembly (ortholog); protein complex oligomerization (ortholog); snoRNA localization (ortholog); FOUND IN pre-snoRNP complex (ortholog) 3 15276419 15304312 - 30032202 116896181 MODEL JAAIVD010000012;XM_032897220 XP_032753111 box C/D snoRNA protein 1 protein-coding 625881771 LOC116914936 anthrax toxin receptor-like 13 9756612 9787076 - 22301074 116914936 MODEL JAAIVD010000008;XM_032919362 XP_032775253 protein-coding 625881790 LOC116885883 vomeronasal type-2 receptor 116-like 16 15029406 15036538 + 22301074;30032202 116885883 MODEL JAAIVD010000004;XM_032887203 XP_032743094 protein-coding 625881797 Trnak-cuu transfer RNA lysine (anticodon CUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 11 48212412 48212484 - 116913059 MODEL JAAIVD010000006 trna 625881798 Bub1b BUB1 mitotic checkpoint serine/threonine kinase B ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN metaphase/anaphase transition of mitotic cell cycle (ortholog); mitotic spindle assembly checkpoint signaling (ortholog); protein localization to chromosome, centromeric region (ortholog); ASSOCIATED WITH Aneuploidy (ortholog); cerebral palsy (ortholog); colon carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); kinetochore (ortholog) 5 96746249 96793898 + 22301074;30032202 116901781 MODEL JAAIVD010000023;XM_032903922;XM_032903923 XP_032759813;XP_032759814 mitotic checkpoint serine/threonine-protein kinase BUB1 beta protein-coding 625881828 LOC116906203 40S ribosomal protein S23-like 1 155985268 155985916 - 116906203 MODEL JAAIVD010000025 pseudo 625881829 LOC116899914 small nucleolar RNA SNORA84 4 28785988 28786121 - 116899914 MODEL JAAIVD010000003;XR_004387886 snorna 625881832 LOC116883895 elongation factor Tu, mitochondrial-like 14 41749401 41750600 + 116883895 MODEL JAAIVD010000009 pseudo 625881833 LOC116909183 60S ribosomal protein L10a-like 9 69935425 69936086 + 116909183 MODEL JAAIVD010000002;XR_004389056 pseudo 625881836 Chit1 chitinase 1 ENCODES a protein that exhibits chitinase activity (ortholog); endochitinase activity (ortholog); INVOLVED IN chitin catabolic process (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; sialic acid storage disease pathway; ASSOCIATED WITH allergic asthma (ortholog); allergic disease (ortholog); allergic rhinitis (ortholog); FOUND IN extracellular region (ortholog) 10 1531168 1579037 - 22301074;30032202 116911179 MODEL JAAIVD010000005;XM_032915043;XM_032915045;XM_032915046 XP_032770934;XP_032770936;XP_032770937 chitotriosidase-1 protein-coding 625881860 LOC116895904 filaggrin-like 3 120552403 120557932 - 22301074;30032202 116895904 MODEL JAAIVD010000012;XM_032896987 XP_032752878 protein-coding 625881865 LOC116910312 NACHT, LRR and PYD domains-containing protein 1a-like 9 50739321 50749473 - 30032202 116910312 MODEL JAAIVD010000002;XM_032914176 XP_032770067 protein-coding 625881872 LOC116886705 uncharacterized LOC116886705 17 25874999 25881715 + 116886705 MODEL JAAIVD010000011;XR_004386126 ncrna 625881877 LOC116913931 40S ribosomal protein SA-like 12 36709369 36718136 - 116913931 MODEL JAAIVD010000007 pseudo 625881878 Nek9 NIMA related kinase 9 ENCODES a protein that exhibits protein kinase activator activity (ortholog); protein kinase binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN mitotic cell cycle (ortholog); regulation of mitotic cell cycle (ortholog); ASSOCIATED WITH ARTHROGRYPOSIS, PERTHES DISEASE, AND UPWARD GAZE PALSY (ortholog); cleft palate (ortholog); genetic disease (ortholog); FOUND IN centrosome (ortholog) 7 99404235 99445222 - 22301074;30032202 116905293 MODEL JAAIVD010000026;XM_032908162;XM_032908163 XP_032764053;XP_032764054 serine/threonine-protein kinase Nek9 protein-coding 625881908 LOC116883429 serpin B6-like 14 51991997 52004535 + 30032202 116883429 MODEL JAAIVD010000009;XM_032884565 XP_032740456 protein-coding 625881918 Arrdc2 arrestin domain containing 2 INVOLVED IN myotube differentiation (ortholog); response to mechanical stimulus (ortholog); skeletal muscle tissue development (ortholog); FOUND IN cytoplasmic vesicle (ortholog); plasma membrane (ortholog) 13 13078317 13082174 - 30032202 116914754 MODEL JAAIVD010000008;XM_032919203;XM_032919204 XP_032775094;XP_032775095 arrestin domain-containing protein 2 protein-coding 625881934 LOC116914181 U6 spliceosomal RNA 12 13078257 13078360 + 116914181 MODEL JAAIVD010000007;XR_004389724 snrna 625881937 Fndc7 fibronectin type III domain containing 7 3 49383885 49419010 + 22301074 116895359 MODEL JAAIVD010000012;XM_032896656 XP_032752547 fibronectin type III domain-containing protein 7 protein-coding 625881953 Ebf1 EBF transcription factor 1 ENCODES a protein that exhibits C2H2 zinc finger domain binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of DNA-templated transcription (ortholog); PARTICIPATES IN DNA modification pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); follicular lymphoma (ortholog); lipodystrophy (ortholog); FOUND IN nucleus (ortholog) 9 27435767 27822514 + 30032202 116909614 MODEL JAAIVD010000002;XM_032913237;XM_032913238 XP_032769128;XP_032769129 transcription factor COE1 protein-coding 625881975 Fam229a family with sequence similarity 229 member A 1 28661399 28663371 - 116896142 MODEL JAAIVD010000025;XM_032897129 XP_032753020 protein FAM229A protein-coding 625881982 Itih2 inter-alpha-trypsin inhibitor heavy chain 2 ENCODES a protein that exhibits hyaluronic acid binding (ortholog) 14 16186783 16222997 - 22301074 116883666 MODEL JAAIVD010000009;XM_032884863 XP_032740754 inter-alpha-trypsin inhibitor heavy chain H2 protein-coding 625882006 LOC116884100 small nucleolar RNA SNORA84 14 68656957 68657089 + 116884100 MODEL JAAIVD010000009;XR_004385839 snorna 625882009 LOC116914671 sperm acrosome-associated protein 7-like 13 72170253 72202729 + 22301074 116914671 MODEL JAAIVD010000008;XM_032919077 XP_032774968 protein-coding 625882019 Sez6 seizure related 6 homolog INVOLVED IN activation of protein kinase C activity (ortholog); adult locomotory behavior (ortholog); cerebellar Purkinje cell layer development (ortholog); ASSOCIATED WITH Childhood Schizophrenia (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN apical dendrite (ortholog); dendritic shaft (ortholog); dendritic spine (ortholog) 9 96611117 96660535 + 30032202 116908700 MODEL JAAIVD010000002;XM_032912026;XM_032912027;XM_032912028;XM_032912029;XM_032912030 XP_032767917;XP_032767918;XP_032767919;XP_032767920;XP_032767921 seizure protein 6 homolog protein-coding 625882048 Prkd1 protein kinase D1 ENCODES a protein that exhibits diacylglycerol-dependent serine/threonine kinase activity (ortholog); heat shock protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to angiotensin (ortholog); cellular response to endothelin (ortholog); PARTICIPATES IN insulin-like growth factor signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Cardiac Fibrosis (ortholog); Cardiomegaly (ortholog); FOUND IN autophagosome membrane (ortholog); cell cortex (ortholog); cell-cell junction (ortholog) 7 63010273 63308093 + 22301074;30032202 116905024 MODEL JAAIVD010000026;XM_032907704 XP_032763595 serine/threonine-protein kinase D1 protein-coding 625882070 Gcgr glucagon receptor ENCODES a protein that exhibits glucagon receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); cellular response to glucagon stimulus (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphas family; glucagon signaling pathway; ASSOCIATED WITH ACTH-independent macronodular adrenal hyperplasia 1 (ortholog); Mahvash disease (ortholog); maturity-onset diabetes of the young type 1 (ortholog); FOUND IN endosome (ortholog); plasma membrane (ortholog) 9 63482625 63491025 - 22301074;30032202 116910170 MODEL JAAIVD010000002;XM_032914028 XP_032769919 protein-coding 625882089 LOC116893442 leukocyte immunoglobulin-like receptor subfamily B member 3 2 176765293 176772179 + 30032202 116893442 MODEL JAAIVD010000001;XM_032895209 XP_032751100 protein-coding 625882100 LOC116912668 40S ribosomal protein S13-like 11 22364769 22365427 + 116912668 MODEL JAAIVD010000006 pseudo 625882101 Ubtfl1 upstream binding transcription factor like 1 INVOLVED IN blastocyst growth (ortholog); embryo implantation (ortholog); regulation of gene expression (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 8 14149632 14153585 + 116907257 MODEL JAAIVD010000027;XM_032910212 XP_032766103 upstream-binding factor 1-like protein 1 protein-coding 625882105 LOC116890416 60S ribosomal protein L31-like 1 269525488 269525925 + 116890416 MODEL JAAIVD010000025 pseudo 625882106 LOC116894953 small nucleolar RNA SNORD113/SNORD114 family 2 69054589 69054670 - 116894953 MODEL JAAIVD010000001 pseudo 625882107 Rnft2 ring finger protein, transmembrane 2 16 35583847 35636692 + 30032202 116885302 MODEL JAAIVD010000004;XM_032886553 XP_032742444 RING finger and transmembrane domain-containing protein 2 protein-coding 625882121 Capn10 calpain 10 ENCODES a protein that exhibits calcium-dependent cysteine-type endopeptidase activity (ortholog); cytoskeletal protein binding (ortholog); SNARE binding (ortholog); INVOLVED IN autophagy of mitochondrion (ortholog); cellular response to insulin stimulus (ortholog); mitochondrion organization (ortholog); ASSOCIATED WITH Diabetic Nephropathies (ortholog); Experimental Diabetes Mellitus (ortholog); genetic disease (ortholog); FOUND IN cytoskeleton (ortholog); cytosol (ortholog); membrane (ortholog) 4 164893326 164905577 + 22301074;30032202 116899651 MODEL JAAIVD010000003;XM_032901660 XP_032757551 calpain-10 protein-coding 625882137 LOC116893934 calcitonin 2 86911766 86916749 + 22301074;30032202 116893934 MODEL JAAIVD010000001;XM_032895651;XM_032895652;XM_032895653;XM_032895654 XP_032751542;XP_032751543;XP_032751544;XP_032751545 calcitonin gene-related peptide 1 protein-coding 625882156 Ube2j1 ubiquitin conjugating enzyme E2 J1 ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN ERAD pathway (ortholog); negative regulation of retrograde protein transport, ER to cytosol (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Hrd1p ubiquitin ligase complex (ortholog) 1 109991710 110009817 - 116902329 MODEL JAAIVD010000025;XM_032904804;XM_032904813 XP_032760695;XP_032760704 ubiquitin-conjugating enzyme E2 J1 protein-coding 625882171 LOC116888162 teneurin-1-like X 115329232 115333715 + 30032202 116888162 MODEL JAAIVD010000014;XM_032889485 XP_032745376 protein-coding 625882177 LOC116895306 protein kinase C and casein kinase II substrate protein 3-like 3 22144228 22145488 - 116895306 MODEL JAAIVD010000012 pseudo 625882178 LOC116913521 tRNA methyltransferase 10 homolog A-like 12 49142605 49143578 - 116913521 MODEL JAAIVD010000007 pseudo 625882179 LOC116897981 V-set domain-containing T-cell activation inhibitor 1-like 4 22811306 22826228 - 116897981 MODEL JAAIVD010000003;XM_032899385 XP_032755276 protein-coding 625882187 Lims2 LIM zinc finger domain containing 2 INVOLVED IN cell-cell adhesion (ortholog); cell-cell junction organization (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2W (ortholog); lymphopenia (ortholog); neutropenia (ortholog); FOUND IN focal adhesion (ortholog) 15 12277642 12307266 - 22301074;30032202 116884274 MODEL JAAIVD010000010;XM_032885358 XP_032741249 LIM and senescent cell antigen-like-containing domain protein 2 protein-coding 625882201 LOC116895540 60S ribosome subunit biogenesis protein NIP7 homolog 3 120948013 120948551 + 116895540 MODEL JAAIVD010000012 pseudo 625882202 Sh2b3 SH2B adaptor protein 3 ENCODES a protein that exhibits phosphate ion binding (ortholog); protein tyrosine kinase binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cell differentiation (ortholog); cellular response to chemokine (ortholog); cellular response to interleukin-3 (ortholog); PARTICIPATES IN erythropoietin signaling pathway; ASSOCIATED WITH Albuminuria (ortholog); chronic myeloid leukemia (ortholog); colorectal cancer (ortholog) 16 32007303 32028364 + 30032202 116885334 MODEL JAAIVD010000004;XM_032886605 XP_032742496 SH2B adapter protein 3 protein-coding 625882214 Chrm5 cholinergic receptor muscarinic 5 ENCODES a protein that exhibits G protein-coupled acetylcholine receptor activity (ortholog); INVOLVED IN dopamine transport (ortholog); regulation of phosphatidylinositol dephosphorylation (ortholog); transmission of nerve impulse (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphaq protein family; G protein mediated signaling pathway via Galphaq family; ASSOCIATED WITH alcohol use disorder (ortholog); cannabis dependence (ortholog); Cocaine-Related Disorders (ortholog) 5 90805745 90857550 - 22301074;30032202 116901748 MODEL JAAIVD010000023;XM_032903888 XP_032759779 muscarinic acetylcholine receptor M5 protein-coding 625882220 Srarp steroid receptor associated and regulated protein ENCODES a protein that exhibits nuclear estrogen receptor binding (ortholog); INVOLVED IN positive regulation of intracellular estrogen receptor signaling pathway (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 1 16708893 16712803 + 30032202 116886379 MODEL JAAIVD010000025;XM_032887850 XP_032743741 steroid receptor-associated and regulated protein protein-coding 625882226 Xpa XPA, DNA damage recognition and repair factor ENCODES a protein that exhibits damaged DNA binding (ortholog); protein domain specific binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN DNA repair (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); multicellular organism growth (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); Cockayne syndrome (ortholog); genetic disease (ortholog); FOUND IN DNA replication factor A complex (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 1 321906 342143 + 22301074;30032202 116890707 MODEL JAAIVD010000025;XM_032891143 XP_032747034 DNA repair protein complementing XP-A cells protein-coding 625882236 Bcl2l14 BCL2 like 14 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN apoptotic process (ortholog); positive regulation of extrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH prostate carcinoma (ortholog); FOUND IN cytosol (ortholog) 6 15012937 15036559 - 22301074 116903176 MODEL JAAIVD010000024;XM_032905547 XP_032761438 apoptosis facilitator Bcl-2-like protein 14 protein-coding 625882246 LOC116889104 uncharacterized LOC116889104 X 24663211 24672674 - 116889104 MODEL JAAIVD010000014;XR_004386364;XR_004386365 ncrna 625882255 LOC116912759 60S ribosomal protein L13a-like 11 75168103 75168718 - 116912759 MODEL JAAIVD010000006 pseudo 625882256 Nelfcd negative elongation factor complex member C/D ENCODES a protein that exhibits RNA polymerase inhibitor activity (ortholog); INVOLVED IN negative regulation of transcription elongation by RNA polymerase II (ortholog); transcription pausing by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH colon cancer (ortholog); colorectal cancer (ortholog); prostate cancer (ortholog); FOUND IN NELF complex (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 5 143552056 143563163 - 22301074;30032202 116902267 MODEL JAAIVD010000023;XM_032904687 XP_032760578 negative elongation factor C/D protein-coding 625882275 Retreg2 reticulophagy regulator family member 2 ENCODES a protein that exhibits endoplasmic reticulum-autophagosome adaptor activity (ortholog); INVOLVED IN collagen catabolic process (ortholog); endoplasmic reticulum organization (ortholog); reticulophagy (ortholog); FOUND IN endoplasmic reticulum (ortholog) 4 148503692 148509872 + 116899516 MODEL JAAIVD010000003;XM_032901372;XM_032901373;XM_032901374 XP_032757263;XP_032757264;XP_032757265 reticulophagy regulator 2 protein-coding 625882297 LOC116889499 small nucleolar RNA SNORA48 X 3670835 3670966 + 116889499 MODEL JAAIVD010000014 pseudo 625882298 Lztfl1 leucine zipper transcription factor like 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN flagellated sperm motility (ortholog); negative regulation of protein localization to ciliary membrane (ortholog); negative regulation of protein localization to cilium (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl syndrome 17 (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 114815990 114839574 - 30032202 116908030 MODEL JAAIVD010000027;XM_032911295;XM_032911297;XM_032911298 XP_032767186;XP_032767188;XP_032767189 leucine zipper transcription factor-like protein 1 protein-coding 625882320 Tex9 testis expressed 9 FOUND IN centriolar satellite (ortholog) 8 66797960 66833247 - 116906784 MODEL JAAIVD010000027;XM_032909638 XP_032765529 testis-expressed protein 9 protein-coding 625882336 LOC116892803 gastrula zinc finger protein XlCGF26.1-like 2 186389930 186396888 + 22301074 116892803 MODEL JAAIVD010000001;XM_032894676 XP_032750567 protein-coding 625882342 LOC116895844 glyceraldehyde-3-phosphate dehydrogenase-like 3 84006884 84030550 - 116895844 MODEL JAAIVD010000012 pseudo 625882343 LOC116889716 DNA-directed RNA polymerase subunit beta'-like 22301074;30032202 116889716 MODEL JAAIVD010000061;XM_032890595 XP_032746486 protein-coding 625882344 Cops8 COP9 signalosome subunit 8 INVOLVED IN activation of NF-kappaB-inducing kinase activity (ortholog); negative regulation of cell population proliferation (ortholog); protein deneddylation (ortholog); FOUND IN COP9 signalosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 4 162616064 162625875 + 30032202 116899629 MODEL JAAIVD010000003;XM_032901602 XP_032757493 COP9 signalosome complex subunit 8 protein-coding 625882356 Trnat-ugu transfer RNA threonine (anticodon UGU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889670 MODEL JAAIVD010000045 trna 625882357 LOC116911856 small nucleolar RNA U13 10 46461167 46461274 + 116911856 MODEL JAAIVD010000005;XR_004389378 snorna 625882360 Epha10 EPH receptor A10 ENCODES a protein that exhibits ATP binding (ortholog); transmembrane-ephrin receptor activity (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 88 (ortholog) 1 33383259 33416486 - 22301074;30032202 116896837 MODEL JAAIVD010000025;XM_032898344 XP_032754235 ephrin type-A receptor 10 protein-coding 625882381 Tmem237 transmembrane protein 237 INVOLVED IN cilium assembly (ortholog); regulation of Wnt signaling pathway (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); Joubert syndrome (ortholog); FOUND IN ciliary transition zone (ortholog); cilium (ortholog); cone photoreceptor outer segment (ortholog) 4 133384074 133412457 + 30032202 116899416 MODEL JAAIVD010000003;XM_032901154 XP_032757045 protein-coding 625882398 Rxfp4 relaxin family peptide/INSL5 receptor 4 INVOLVED IN positive regulation of feeding behavior (ortholog) 3 64895407 64896579 + 22301074;30032202 116895426 MODEL JAAIVD010000012;XM_032896705 XP_032752596 relaxin-3 receptor 2 protein-coding 625882401 Kdm8 lysine demethylase 8 ENCODES a protein that exhibits aminopeptidase activity (ortholog); chromatin binding (ortholog); endopeptidase activity (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); fibroblast proliferation (ortholog); G2/M transition of mitotic cell cycle (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH breast cancer (ortholog); Coffin-Siris syndrome (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleus (ortholog) 2 76464708 76480502 - 30032202 116891539 MODEL JAAIVD010000001;XM_032892695;XM_032892696 XP_032748586;XP_032748587 bifunctional peptidase and arginyl-hydroxylase JMJD5 protein-coding 625882414 LOC116913107 cadherin-related family member 3-like 12 83739966 83808583 - 22301074;30032202 116913107 MODEL JAAIVD010000007;XM_032917247 XP_032773138 protein-coding 625882435 Ms4a7 membrane spanning 4-domains A7 FOUND IN trans-Golgi network (ortholog) 2 10774434 10789567 - 30032202 116893645 MODEL JAAIVD010000001;XM_032895362;XM_032895363 XP_032751253;XP_032751254 membrane-spanning 4-domains subfamily A member 7 protein-coding 625882449 LOC116909641 testisin 9 1186874 1191882 + 22301074 116909641 MODEL JAAIVD010000002;XM_032913284 XP_032769175 protein-coding 625882459 Lin28b lin-28 RNA binding posttranscriptional regulator B ENCODES a protein that exhibits RNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN miRNA catabolic process (ortholog); negative regulation of pre-miRNA processing (ortholog); negative regulation of primary miRNA processing (ortholog); ASSOCIATED WITH disease of cellular proliferation (ortholog); Neoplastic Cell Transformation (ortholog); neuroblastoma (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 3 219268298 219342384 - 22301074 116897347 MODEL JAAIVD010000012;XM_032899104;XM_032899105 XP_032754995;XP_032754996 lin-28 homolog B;protein lin-28 homolog B protein-coding 625882468 LOC116895859 lymphokine-activated killer T-cell-originated protein kinase-like 3 93103472 93104529 - 116895859 MODEL JAAIVD010000012 pseudo 625882469 LOC116900528 40S ribosomal protein S6-like 5 87356919 87357674 - 116900528 MODEL JAAIVD010000023 pseudo 625882470 Smpd3 sphingomyelin phosphodiesterase 3 ENCODES a protein that exhibits identical protein binding (ortholog); neutral sphingomyelin phosphodiesterase activity (ortholog); phosphatidic acid binding (ortholog); INVOLVED IN artery smooth muscle contraction (ortholog); BMP signaling pathway (ortholog); bone development (ortholog); PARTICIPATES IN ceramide signaling pathway; ASSOCIATED WITH chronic obstructive pulmonary disease (ortholog); hypopituitarism (ortholog); leukemia (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); Golgi cis cisterna (ortholog) 17 25998607 26079684 - 22301074;30032202 116886207 MODEL JAAIVD010000011;XM_032887594;XM_032887595 XP_032743485;XP_032743486 protein-coding 625882485 LOC116902461 U6 spliceosomal RNA 5 15552707 15552813 + 116902461 MODEL JAAIVD010000023;XR_004388080 snrna 625882488 Slc22a16 solute carrier family 22 member 16 ENCODES a protein that exhibits amine transmembrane transporter activity (ortholog); carnitine transmembrane transporter activity (ortholog); spermidine transmembrane transporter activity (ortholog); INVOLVED IN acid secretion (ortholog); carnitine transmembrane transport (ortholog); carnitine transport (ortholog); PARTICIPATES IN doxorubicin pharmacokinetics pathway; ASSOCIATED WITH COVID-19 (ortholog); systemic juvenile rheumatoid arthritis (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) 18 40336722 40371101 + 22301074;30032202 116886976 MODEL JAAIVD010000013;XM_032888466 XP_032744357 protein-coding 625882500 LOC116888601 uncharacterized LOC116888601 X 89120755 89124287 - 116888601 MODEL JAAIVD010000014;XR_004386327 ncrna 625882504 Tnfrsf17 TNF receptor superfamily member 17 INVOLVED IN lymphocyte homeostasis (ortholog); ASSOCIATED WITH colon carcinoma (ortholog); COVID-19 (ortholog); multiple myeloma (ortholog) 9 10962116 10967864 - 22301074;30032202 116909486 MODEL JAAIVD010000002;XM_032913084 XP_032768975 tumor necrosis factor receptor superfamily member 17 protein-coding 625882511 LOC116892493 zinc finger protein 45-like 2 170403016 170433038 + 30032202 116892493 MODEL JAAIVD010000001;XM_032894232;XM_032894233;XM_032894234;XM_032894235;XM_032894236;XM_032894237;XR_004386953 XP_032750123;XP_032750124;XP_032750125;XP_032750126;XP_032750127;XP_032750128 protein-coding 625882541 LOC116893623 interferon-induced transmembrane protein 3 2 8468624 8469835 + 30032202 116893623 MODEL JAAIVD010000001;X61381;XM_032895336 CAA43655;XP_032751227 protein-coding 625882547 LOC116890258 60S ribosomal protein L36-like 1 12016796 12017151 - 116890258 MODEL JAAIVD010000025 pseudo 625882548 LOC116899608 60S ribosomal protein L10a-like 1 107657873 107658495 + 116899608 MODEL JAAIVD010000025 pseudo 625882549 Fabp12 fatty acid binding protein 12 3 144287510 144303130 - 30032202 116895586 MODEL JAAIVD010000012;XM_032896813 XP_032752704 fatty acid-binding protein 12 protein-coding 625882558 C1qtnf2 C1q and TNF related 2 ENCODES a protein that exhibits identical protein binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN positive regulation of D-glucose import across plasma membrane (ortholog); positive regulation of fatty acid oxidation (ortholog); positive regulation of glycogen biosynthetic process (ortholog); FOUND IN extracellular region (ortholog); protein-containing complex (ortholog) 9 26289770 26306552 + 22301074 116909009 MODEL JAAIVD010000002;XM_032912483 XP_032768374 complement C1q tumor necrosis factor-related protein 2 protein-coding 625882566 LOC116886305 preferentially expressed antigen in melanoma-like protein 7 1 14478633 14481406 - 22301074;30032202 116886305 MODEL JAAIVD010000025;XM_032887751 XP_032743642 protein-coding 625882571 Fignl1 fidgetin like 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); protein-containing complex destabilizing activity (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); DNA recombinase disassembly (ortholog); male meiotic nuclear division (ortholog); ASSOCIATED WITH Kidney Neoplasms (ortholog); nicotine dependence (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nuclear chromosome (ortholog) 11 80721458 80724267 - 22301074;30032202 116912765 MODEL JAAIVD010000006;XM_032916915 XP_032772806 fidgetin-like protein 1 protein-coding 625882576 LOC116893367 secretoglobin family 2B member 24-like 2 164709466 164710387 + 22301074;30032202 116893367 MODEL JAAIVD010000001;XM_032895168 XP_032751059 protein-coding 625882581 LOC116886763 5S ribosomal RNA 17 43131748 43131865 - 116886763 MODEL JAAIVD010000011;XR_004386164 rrna 625882584 Dnhd1 dynein heavy chain domain 1 INVOLVED IN flagellated sperm motility (ortholog); sperm flagellum assembly (ortholog); ASSOCIATED WITH essential tremor (ortholog); intellectual disability (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN sperm annulus (ortholog); sperm flagellum (ortholog); sperm midpiece (ortholog) 2 104478342 104564370 + 22301074;30032202 116891823 MODEL JAAIVD010000001;XM_032893188 XP_032749079 dynein heavy chain domain-containing protein 1 protein-coding 625882632 LOC116898315 nuclear receptor subfamily 5 group A member 2-like 4 37517084 37518379 + 116898315 MODEL JAAIVD010000003 pseudo 625882633 LOC116890119 cadherin EGF LAG seven-pass G-type receptor 1-like 1 255334217 255381347 - 22301074 116890119 MODEL JAAIVD010000025;XM_032890861 XP_032746752 protein-coding 625882639 Arc activity regulated cytoskeleton associated protein ENCODES a protein that exhibits mRNA binding (ortholog); structural molecule activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); endoderm development (ortholog); learning (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); Alcoholic Intoxication (ortholog); Alzheimer's disease (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); dendrite (ortholog) 1 247413850 247417327 - 22301074;30032202 116912504 MODEL JAAIVD010000025;XM_032916594 XP_032772485 activity-regulated cytoskeleton-associated protein protein-coding 625882646 LOC116892021 uncharacterized LOC116892021 2 137781180 137852702 + 116892021 MODEL JAAIVD010000001;XR_004386891;XR_004386892 ncrna 625882653 LOC116902495 U6 spliceosomal RNA 5 734338 734440 - 116902495 MODEL JAAIVD010000023;XR_004388109 snrna 625882656 Sem1 SEM1 26S proteasome subunit ENCODES a protein that exhibits ubiquitin binding (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH squamous cell carcinoma (ortholog); FOUND IN integrator complex (ortholog); proteasome complex (ortholog); protein-containing complex (ortholog) 1 46159208 46159645 + 22301074;30032202 116899095 MODEL JAAIVD010000025;XM_032900608 XP_032756499 26S proteasome complex subunit SEM1;SEM1 26S proteasome complex subunit protein-coding 625882661 LOC116905133 uncharacterized LOC116905133 7 53478015 53479423 - 116905133 MODEL JAAIVD010000026;XR_004388488 ncrna 625882666 Kash5 KASH domain containing 5 ENCODES a protein that exhibits dynein complex binding (ortholog); identical protein binding (ortholog); INVOLVED IN actin filament organization (ortholog); chromosome localization to nuclear envelope involved in homologous chromosome segregation (ortholog); double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH azoospermia (ortholog); hereditary breast ovarian cancer syndrome (ortholog); primary ovarian insufficiency 16 (ortholog); FOUND IN chromosome, telomeric region (ortholog); lateral element (ortholog); meiotic nuclear membrane microtubule tethering complex (ortholog) 2 154334927 154358328 + 30032202 116894344 MODEL JAAIVD010000001;XM_032896042 XP_032751933 protein KASH5 protein-coding 625882689 LOC116896316 uncharacterized LOC116896316 3 39038657 39040648 + 116896316 MODEL JAAIVD010000012;XR_004387331 ncrna 625882693 LOC116914324 U1 small nuclear ribonucleoprotein C-like 13 44625068 44627913 - 116914324 MODEL JAAIVD010000008 pseudo 625882694 LOC116895334 glyceraldehyde-3-phosphate dehydrogenase-like 3 37164438 37165445 - 22301074;30032202 116895334 MODEL JAAIVD010000012;XM_032896642 XP_032752533 protein-coding 625882698 Prok2 prokineticin 2 ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); INVOLVED IN angiogenesis (ortholog); chemotaxis (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH amenorrhea (ortholog); disorder of sexual development (ortholog); genetic disease (ortholog) 6 47347085 47361289 + 116902708 MODEL JAAIVD010000024;XM_032905061;XM_032905062;XM_032905063 XP_032760952;XP_032760953;XP_032760954 prokineticin-2 protein-coding 625882707 LOC116894777 cbp/p300-interacting transactivator 1-like 2 215427 230093 - 116894777 MODEL JAAIVD010000001 pseudo 625882708 LOC116889370 high mobility group protein B4-like X 82599877 82600420 + 116889370 MODEL JAAIVD010000014 pseudo 625882709 LOC116895016 small nucleolar RNA SNORA48 2 77396679 77396821 - 116895016 MODEL JAAIVD010000001;XR_004387203 snorna 625882712 LOC116895158 60S ribosomal protein L28-like 3 9005388 9005700 - 116895158 MODEL JAAIVD010000012 pseudo 625882713 Rasl10a RAS like family 10 member A 11 74035947 74038000 + 22301074 116912264 MODEL JAAIVD010000006;XM_032916252 XP_032772143 ras-like protein family member 10A protein-coding 625882720 Trpm1 transient receptor potential cation channel subfamily M member 1 ENCODES a protein that exhibits calcium channel activity (ortholog); monoatomic cation channel activity (ortholog); monoatomic cation transmembrane transporter activity (ortholog); INVOLVED IN calcium ion import across plasma membrane (ortholog); cellular response to light stimulus (ortholog); G protein-coupled glutamate receptor signaling pathway (ortholog); ASSOCIATED WITH congenital stationary night blindness (ortholog); congenital stationary night blindness 1C (ortholog); Ependymomas (ortholog); FOUND IN cell tip (ortholog); dendrite (ortholog); endoplasmic reticulum (ortholog) 2 136150467 136265086 - 22301074;30032202 116894293 MODEL JAAIVD010000001;XM_032895997;XM_032895998 XP_032751888;XP_032751889 protein-coding 625882753 Mdh1 malate dehydrogenase 1 ENCODES a protein that exhibits L-malate dehydrogenase (NAD+) activity (ortholog); malate dehydrogenase activity (ortholog); NAD binding (ortholog); INVOLVED IN malate metabolic process (ortholog); malate-aspartate shuttle (ortholog); NAD+ metabolic process (ortholog); PARTICIPATES IN Leigh disease pathway; nicotinamide adenine dinucleotide metabolic pathway; primary hyperoxaluria type 2 pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); adult respiratory distress syndrome (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 11 89663414 89679121 - 22301074;30032202 116912092 MODEL JAAIVD010000006;XM_032915983 XP_032771874 malate dehydrogenase, cytoplasmic protein-coding 625882766 LOC116907697 cytochrome c, somatic-like 8 17277182 17277553 + 116907697 MODEL JAAIVD010000027 pseudo 625882767 LOC116899727 zinc finger protein 844-like 4 182335240 182336436 + 116899727 MODEL JAAIVD010000003 pseudo 625882768 Sdr42e1 short chain dehydrogenase/reductase family 42E, member 1 ASSOCIATED WITH acromesomelic dysplasia 4 (ortholog); Experimental Liver Cirrhosis (ortholog) 17 37316317 37328923 - 22301074 116886468 MODEL JAAIVD010000011;XM_032887970 XP_032743861 short-chain dehydrogenase/reductase family 42E member 1 protein-coding 625882775 Znf260 zinc finger protein 260 FOUND IN nucleoplasm (ortholog) 2 165929447 165937803 - 30032202 116892344 MODEL JAAIVD010000001;XM_032893986 XP_032749877 protein-coding 625882781 Slc35f2 solute carrier family 35 member F2 ENCODES a protein that exhibits choline transmembrane transporter activity (ortholog); transmembrane transporter activity (ortholog); INVOLVED IN choline transport (ortholog); tRNA queuosine(34) biosynthetic process from salvaged queuine (ortholog); FOUND IN plasma membrane (ortholog) 8 47750104 47793634 + 22301074 116907939 MODEL JAAIVD010000027;XM_032911156 XP_032767047 protein-coding 625882793 Igfals insulin like growth factor binding protein acid labile subunit ENCODES a protein that exhibits insulin-like growth factor binding (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cellular response to epidermal growth factor stimulus (ortholog); cellular response to growth hormone stimulus (ortholog); PARTICIPATES IN insulin-like growth factor signaling pathway; ASSOCIATED WITH Acid-Labile Subunit Deficiency (ortholog); anorexia nervosa (ortholog); Burns (ortholog); FOUND IN insulin-like growth factor ternary complex (ortholog) 9 2158409 2162472 + 22301074;30032202 116910004 MODEL JAAIVD010000002;XM_032913789;XM_032913790 XP_032769680;XP_032769681 insulin-like growth factor-binding protein complex acid labile subunit protein-coding 625882803 Shq1 SHQ1, H/ACA ribonucleoprotein assembly factor INVOLVED IN positive regulation of TORC1 signaling (ortholog); protein-RNA complex assembly (ortholog); regulation of androgen receptor signaling pathway (ortholog); ASSOCIATED WITH dystonia 35, childhood-onset (ortholog); NEURODEVELOPMENTAL DISORDER WITH DYSTONIA AND SEIZURES (ortholog); FOUND IN Cajal body (ortholog); cytoplasm (ortholog); nucleolus (ortholog) 6 46349358 46442105 + 30032202 116903462 MODEL JAAIVD010000024;XM_032906015 XP_032761906 protein SHQ1 homolog protein-coding 625882818 Lmtk2 lemur tyrosine kinase 2 ENCODES a protein that exhibits myosin VI binding (ortholog); protein phosphatase inhibitor activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN early endosome to late endosome transport (ortholog); endocytic recycling (ortholog); peptidyl-serine phosphorylation (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN early endosome (ortholog); Golgi apparatus (ortholog); growth cone (ortholog) 16 9006194 9087336 - 22301074;30032202 116885948 MODEL JAAIVD010000004;XM_032887265;XM_032887266;XM_032887268 XP_032743156;XP_032743157;XP_032743159 serine/threonine-protein kinase LMTK2 protein-coding 625882841 Pla2g15 phospholipase A2 group XV ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); acylglycerol O-acyltransferase activity (ortholog); glycerophospholipid phospholipase A1 activity (ortholog); INVOLVED IN ceramide metabolic process (ortholog); diacylglycerol biosynthetic process (ortholog); glycerophospholipid metabolic process (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; ASSOCIATED WITH arteriosclerosis (ortholog); COVID-19 (ortholog); FOUND IN extracellular region (ortholog); lysosome (ortholog) 17 25887964 25905615 + 22301074;30032202 116886388 MODEL JAAIVD010000011;XM_032887854;XM_032887855 XP_032743745;XP_032743746 group XV phospholipase A2 protein-coding 625882856 LOC116914464 zinc finger protein 709-like 13 13801475 13813111 + 30032202 116914464 MODEL JAAIVD010000008;XM_032918765;XM_032918766 XP_032774656;XP_032774657 zinc finger protein 14-like protein-coding 625882867 Sap30 Sin3A associated protein 30 ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); skeletal muscle cell differentiation (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); FOUND IN histone deacetylase complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 13 31399018 31404389 + 22301074;30032202 116914780 MODEL JAAIVD010000008;XM_032919228 XP_032775119 histone deacetylase complex subunit SAP30 protein-coding 625882875 Slc25a10 solute carrier family 25 member 10 ENCODES a protein that exhibits dicarboxylic acid transmembrane transporter activity (ortholog); malate transmembrane transporter activity (ortholog); phosphate transmembrane transporter activity (ortholog); INVOLVED IN glyceraldehyde-3-phosphate biosynthetic process (ortholog); malate transport (ortholog); phosphate ion transport (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 9 63524817 63532481 - 22301074;30032202 116908950 MODEL JAAIVD010000002;XM_032912410 XP_032768301 mitochondrial dicarboxylate carrier protein-coding 625882890 LOC116906891 ubiquitin-40S ribosomal protein S27a-like 1 156058283 156059730 + 116906891 MODEL JAAIVD010000025 pseudo 625882891 Gask1b golgi associated kinase 1B ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN Golgi apparatus (ortholog) 3 73451547 73506871 - 30032202 116896757 MODEL JAAIVD010000012;XM_032898203 XP_032754094 Golgi-associated kinase 1B protein-coding 625882900 LOC116912491 granulocyte-macrophage colony-stimulating factor receptor subunit alpha-like 11 18713998 18719623 - 22301074 116912491 MODEL JAAIVD010000006;XM_032916575;XM_032916576;XM_032916577;XM_032916578 XP_032772466;XP_032772467;XP_032772468;XP_032772469 protein-coding 625882923 Ttll11 tubulin tyrosine ligase like 11 ENCODES a protein that exhibits tubulin-glutamic acid ligase activity (ortholog); INVOLVED IN microtubule severing (ortholog); protein polyglutamylation (ortholog); FOUND IN ciliary basal body (ortholog) 5 13496764 13580434 + 30032202 116901345 MODEL JAAIVD010000023;XM_032903181 XP_032759072 tubulin polyglutamylase TTLL11 protein-coding 625882932 Ubxn11 UBX domain protein 11 1 24113838 24138255 - 30032202 116894871 MODEL JAAIVD010000025;XM_032896500 XP_032752391 UBX domain-containing protein 11 protein-coding 625882951 LOC116897781 immunoglobulin omega chain-like 4 3243573 3244094 + 30032202 116897781 MODEL JAAIVD010000003;XM_032899206 XP_032755097 protein-coding 625882956 Retn resistin INVOLVED IN fat cell differentiation (ortholog); negative regulation of feeding behavior (ortholog); positive regulation of collagen metabolic process (ortholog); ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Albuminuria (ortholog); chronic kidney disease (ortholog); FOUND IN extracellular region (ortholog) 16 1577707 1579490 + 22301074;30032202 116885502 MODEL JAAIVD010000004;XM_032886794 XP_032742685 protein-coding 625882964 Aqp10 aquaporin 10 ENCODES a protein that exhibits glycerol channel activity (ortholog); water channel activity (ortholog); INVOLVED IN glycerol transmembrane transport (ortholog); protein homotetramerization (ortholog); response to toxic substance (ortholog); PARTICIPATES IN water transport pathway; FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog) 3 63679378 63683081 + 22301074;30032202 116895798 MODEL JAAIVD010000012;XM_032896938 XP_032752829 aquaporin-10 protein-coding 625882972 LOC116885489 uncharacterized LOC116885489 16 39239452 39245014 + 116885489 MODEL JAAIVD010000004;XR_004386011 ncrna 625882977 Ms4a5 membrane spanning 4-domains A5 2 10738716 10746967 - 30032202 116893643 MODEL JAAIVD010000001;XM_032895359 XP_032751250 membrane-spanning 4-domains subfamily A member 5 protein-coding 625882986 LOC116907190 vomeronasal type-2 receptor 116-like 1 159468310 159491754 + 22301074;30032202 116907190 MODEL JAAIVD010000025;XM_032910153 XP_032766044 protein-coding 625882995 LOC116906445 small nucleolar RNA SNORA17 7 54523049 54523179 - 116906445 MODEL JAAIVD010000026;XR_004388703 snorna 625882998 Wwp1 WW domain containing E3 ubiquitin protein ligase 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein ubiquitination (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Wolff-Parkinson-White syndrome (ortholog) 1 124017630 124114463 + 22301074 116903076 MODEL JAAIVD010000025;XM_032905398;XM_032905406;XM_032905412 XP_032761289;XP_032761297;XP_032761303 NEDD4-like E3 ubiquitin-protein ligase WWP1 protein-coding 625883034 Erln endoregulin INVOLVED IN negative regulation of ATPase-coupled calcium transmembrane transporter activity (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 9 68147537 68148957 - 116909814 MODEL JAAIVD010000002;XM_032913517 XP_032769408 Smim6 small integral membrane protein 6 protein-coding 625883040 LOC116913181 non-histone chromosomal protein HMG-17-like 12 59483481 59483743 - 116913181 MODEL JAAIVD010000007 pseudo 625883041 Stk25 serine/threonine kinase 25 ENCODES a protein that exhibits protein homodimerization activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); establishment of Golgi localization (ortholog); establishment or maintenance of cell polarity (ortholog); FOUND IN cytoplasm (ortholog); FAR/SIN/STRIPAK complex (ortholog); Golgi apparatus (ortholog) 4 165552156 165578626 - 22301074 116899665 MODEL JAAIVD010000003;XM_032901677;XM_032901678;XM_032901679 XP_032757568;XP_032757569;XP_032757570 serine/threonine-protein kinase 25 protein-coding 625883065 Ap3d1 adaptor related protein complex 3 subunit delta 1 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); antigen processing and presentation (ortholog); ASSOCIATED WITH genetic disease (ortholog); hemorrhagic disease (ortholog); Hermansky-Pudlak syndrome (ortholog); FOUND IN axon (ortholog); endosome membrane (ortholog); glutamatergic synapse (ortholog) 1 154141521 154176648 + 22301074;30032202 116904937 MODEL JAAIVD010000025;XM_032907579 XP_032763470 AP-3 complex subunit delta-1 protein-coding 625883100 Als2cl ALS2 C-terminal like ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN intracellular protein localization (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN cytoplasmic vesicle (ortholog) 8 101465833 101481930 + 116907687 MODEL JAAIVD010000027;XM_032910793 XP_032766684 ALS2 C-terminal-like protein protein-coding 625883129 LOC116904542 proline-rich proteoglycan 2 6 16066502 16069463 - 30032202 116904542 MODEL JAAIVD010000024;XM_032907335 XP_032763226 protein-coding 625883138 Rbm34 RNA binding motif protein 34 FOUND IN nucleolus (ortholog) 17 46468763 46488579 - 22301074 116886178 MODEL JAAIVD010000011;XM_032887546 XP_032743437 RNA-binding protein 34 protein-coding 625883152 LOC116900301 olfactory receptor 5T3-like 5 63812326 63813303 + 22301074;30032202 116900301 MODEL JAAIVD010000023;XM_032902057 XP_032757948 protein-coding 625883156 LOC116893237 60S ribosomal protein L7a-like 2 121605658 121607265 - 116893237 MODEL JAAIVD010000001 pseudo 625883157 Arrb2 arrestin beta 2 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); alpha-1A adrenergic receptor binding (ortholog); alpha-1B adrenergic receptor binding (ortholog); INVOLVED IN adult walking behavior (ortholog); cell chemotaxis (ortholog); chemokine-mediated signaling pathway (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT1 receptor; calcium signaling pathway via the calcium-sensing receptor; corticotropin-releasing hormone signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); amphetamine abuse (ortholog); Arteriovenous Fistula (ortholog); FOUND IN basolateral plasma membrane (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) 9 50043684 50051664 + 22301074;30032202 116909587 MODEL JAAIVD010000002;XM_032913210 XP_032769101 beta-arrestin-2 protein-coding 625883176 Ecpas Ecm29 proteasome adaptor and scaffold ENCODES a protein that exhibits proteasome binding (ortholog); INVOLVED IN ERAD pathway (ortholog); FOUND IN centrosome (ortholog); COPII-coated ER to Golgi transport vesicle (ortholog); cytoplasmic vesicle (ortholog) 1 92561586 92669508 + 22301074;30032202 116901593 MODEL JAAIVD010000025;XM_032903622 XP_032759513 proteasome adapter and scaffold protein ECM29 protein-coding 625883229 LOC116906749 uncharacterized LOC116906749 8 43607745 43608316 + 116906749 MODEL JAAIVD010000027;XR_004388767 ncrna 625883233 Ghr growth hormone receptor ENCODES a protein that exhibits growth factor binding (ortholog); growth hormone receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN activation of Janus kinase activity (ortholog); cartilage development involved in endochondral bone morphogenesis (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); PARTICIPATES IN growth hormone signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); Brain Hypoxia-Ischemia (ortholog); breast cancer (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); growth hormone receptor complex (ortholog) 3 176485597 176716127 + 22301074;2792761;30032202 116897160 A0A8A1UFY8;A0A8A1UIV9;B4ERR8 MODEL AM910976;EU814883;EU814885;JAAIVD010000012;X16726;XM_032898830 ACN62938;ACN62940;CAP45643;XP_032754721 protein-coding 625883247 LOC116890316 U5 spliceosomal RNA 1 40826272 40826387 + 116890316 MODEL JAAIVD010000025;XR_004386540 snrna 625883250 Med12 mediator complex subunit 12 ENCODES a protein that exhibits chromatin binding (ortholog); nuclear thyroid hormone receptor binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN axis elongation involved in somitogenesis (ortholog); embryonic brain development (ortholog); embryonic neurocranium morphogenesis (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH adrenocortical carcinoma (ortholog); Agenesis of Corpus Callosum (ortholog); angiosarcoma (ortholog); FOUND IN mediator complex (ortholog); nucleus (ortholog); ubiquitin ligase complex (ortholog) X 59245992 59269018 - 22301074;30032202 116888474 MODEL JAAIVD010000014;XM_032889753 XP_032745644 mediator of RNA polymerase II transcription subunit 12 protein-coding 625883300 LOC116897052 uncharacterized LOC116897052 3 149555288 149557755 - 116897052 MODEL JAAIVD010000012;XR_004387392 ncrna 625883304 LOC116890238 olfactory receptor 8S1-like 1 271245471 271246397 + 22301074 116890238 MODEL JAAIVD010000025;XM_032890967 XP_032746858 protein-coding 625883307 LOC116906217 Ig heavy chain V region 5-84-like 7 121377729 121380440 + 116906217 MODEL JAAIVD010000026 pseudo 625883308 LOC116887998 ATP-binding cassette sub-family E member 1-like X 75326004 75327788 + 116887998 MODEL JAAIVD010000014 pseudo 625883309 LOC116900893 olfactory receptor 4C15-like 5 70963050 70963985 - 22301074 116900893 MODEL JAAIVD010000023;XM_032902567 XP_032758458 protein-coding 625883312 Mex3d mex-3 RNA binding family member D ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); FOUND IN nucleus (ortholog); perinuclear region of cytoplasm (ortholog) 1 154495621 154502714 + 22301074;30032202 116905109 MODEL JAAIVD010000025;XM_032907850 XP_032763741 RNA-binding protein MEX3D protein-coding 625883318 LOC116900685 cystatin 10-like 5 128914239 128918870 + 22301074;30032202 116900685 MODEL JAAIVD010000023;XM_032902388 XP_032758279 protein-coding 625883326 Itprip inositol 1,4,5-trisphosphate receptor interacting protein ENCODES a protein that exhibits protein kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of extrinsic apoptotic signaling pathway via death domain receptors (ortholog); FOUND IN nuclear outer membrane (ortholog) 2 47405375 47427827 - 30032202 116891275 MODEL JAAIVD010000001;XM_032892176 XP_032748067 inositol 1,4,5-trisphosphate receptor-interacting protein protein-coding 625883332 LOC116905622 high mobility group protein B2-like 7 19145639 19147417 - 116905622 MODEL JAAIVD010000026 pseudo 625883333 LOC116907148 DNA-directed RNA polymerases I, II, and III subunit RPABC4-like 8 64798305 64798477 + 116907148 MODEL JAAIVD010000027 pseudo 625883334 LOC116912559 40S ribosomal protein S3a-like 11 58108238 58109026 + 22301074;30032202 116912559 MODEL JAAIVD010000006;XM_032916661 XP_032772552 protein-coding 625883337 LOC116897723 AP-3 complex subunit sigma-1-like 4 39975939 40006042 + 116897723 MODEL JAAIVD010000003 pseudo 625883338 LOC116912257 40S ribosomal protein S2-like 11 64226383 64227283 + 116912257 MODEL JAAIVD010000006 pseudo 625883339 LOC116883237 uncharacterized LOC116883237 14 60243128 60243642 - 116883237 MODEL JAAIVD010000009;XM_032884245 XP_032740136 uncharacterized protein LOC116883237 protein-coding 625883344 LOC116895492 cytochrome c oxidase assembly protein COX16 homolog, mitochondrial-like 3 102074244 102074482 - 116895492 MODEL JAAIVD010000012 pseudo 625883345 LOC116909431 L-lactate dehydrogenase A chain-like 9 52877920 52878948 + 116909431 MODEL JAAIVD010000002 pseudo 625883346 LOC116893669 olfactory receptor 4D11 2 12134816 12135748 - 22301074 116893669 MODEL JAAIVD010000001;XM_032895384 XP_032751275 protein-coding 625883349 LOC116912059 rRNA 2'-O-methyltransferase fibrillarin-like 11 96929446 96945917 - 116912059 MODEL JAAIVD010000006 pseudo 625883350 Cdk2ap2 cyclin dependent kinase 2 associated protein 2 INVOLVED IN negative regulation of G1/S transition of mitotic cell cycle (ortholog); regulation of microtubule cytoskeleton organization (ortholog); regulation of stem cell division (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); microtubule (ortholog); nucleus (ortholog) 2 3542624 3544674 - 30032202 116890791 MODEL JAAIVD010000001;XM_032891265;XM_032891266;XM_032891267 XP_032747156;XP_032747157;XP_032747158 cyclin-dependent kinase 2-associated protein 2 protein-coding 625883364 Cd38 CD38 molecule ENCODES a protein that exhibits hydrolase activity, acting on glycosyl bonds (ortholog); identical protein binding (ortholog); NAD+ nucleosidase activity, cyclic ADP-ribose generating (ortholog); INVOLVED IN artery smooth muscle contraction (ortholog); B cell receptor signaling pathway (ortholog); female pregnancy (ortholog); PARTICIPATES IN ADP-ribosylation pathway, cyclic ribosylation; ASSOCIATED WITH Albuminuria (ortholog); Cardiomegaly (ortholog); Diabetic Nephropathies (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell surface (ortholog); membrane (ortholog) 11 61853573 61894126 - 22301074;30032202 116912587 MODEL JAAIVD010000006;XM_032916703 XP_032772594 ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 protein-coding 625883376 Lypd6b LY6/PLAUR domain containing 6B ENCODES a protein that exhibits acetylcholine receptor regulator activity (ortholog) 5 27759257 27806085 + 30032202 116901397 MODEL JAAIVD010000023;XM_032903268;XR_004387987;XR_004387988 XP_032759159 ly6/PLAUR domain-containing protein 6B protein-coding 625883390 LOC116903050 glyceraldehyde-3-phosphate dehydrogenase-like 6 111225349 111226332 - 116903050 MODEL JAAIVD010000024 pseudo 625883391 LOC116898817 protein FAM162A-like 4 20816356 21048841 - 30032202 116898817 MODEL JAAIVD010000003;XM_032900171 XP_032756062 protein-coding 625883400 LOC116887749 U2 spliceosomal RNA 18 48662419 48662615 - 116887749 MODEL JAAIVD010000013;XR_004386252 snrna 625883403 LOC116897189 heterogeneous nuclear ribonucleoprotein R-like 3 184077855 184079711 - 116897189 MODEL JAAIVD010000012 pseudo 625883404 Ablim3 actin binding LIM protein family member 3 INVOLVED IN cilium assembly (ortholog); lamellipodium assembly (ortholog); positive regulation of protein localization to mitochondrion (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN glutamatergic synapse (ortholog); lamellipodium (ortholog); stress fiber (ortholog) 15 70035833 70153863 + 22301074;30032202 116884454 MODEL JAAIVD010000010;XM_032885553 XP_032741444 actin-binding LIM protein 3 protein-coding 625883432 Gabarapl2 GABA type A receptor associated protein like 2 ENCODES a protein that exhibits phosphatidylethanolamine binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); negative regulation of proteasomal protein catabolic process (ortholog); protein localization to endoplasmic reticulum (ortholog); PARTICIPATES IN autophagy pathway; FOUND IN autophagosome (ortholog); autophagosome membrane (ortholog); cytoplasm (ortholog) 17 31632346 31633514 + 116886351 MODEL JAAIVD010000011;XM_032887803 XP_032743694 gamma-aminobutyric acid receptor-associated protein-like 2 protein-coding 625883438 LOC116885988 U6 spliceosomal RNA 16 11611518 11611620 + 116885988 MODEL JAAIVD010000004;XR_004386064 snrna 625883441 Cstf2t cleavage stimulation factor subunit 2 tau variant ENCODES a protein that exhibits RNA binding (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway 2 31174163 31177862 + 22301074;30032202 116891083 MODEL JAAIVD010000001;XM_032891797 XP_032747688 protein-coding 625883446 C2 complement C2 ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); INVOLVED IN activation of membrane attack complex (ortholog); complement activation (ortholog); complement activation, classical pathway (ortholog); ASSOCIATED WITH age related macular degeneration 14 (ortholog); Alzheimer's disease (ortholog); atypical hemolytic-uremic syndrome (ortholog); FOUND IN classical-complement-pathway C3/C5 convertase complex (ortholog); symbiont cell surface (ortholog) 18 7454591 7474022 - 22301074;30032202 116887314 MODEL JAAIVD010000013;XM_032888903 XP_032744794 protein-coding 625883468 Otop1 otopetrin 1 ENCODES a protein that exhibits proton channel activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); detection of gravity (ortholog); inner ear morphogenesis (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) 11 66886611 66914061 - 22301074;30032202 116912811 MODEL JAAIVD010000006;XM_032916979 XP_032772870 proton channel OTOP1 protein-coding 625883477 Sart1 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP INVOLVED IN mRNA splicing, via spliceosome (ortholog); positive regulation of cytotoxic T cell differentiation (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN Cajal body (ortholog); catalytic step 2 spliceosome (ortholog); Golgi apparatus (ortholog) 2 2282965 2291335 + 22301074;30032202 116890704 MODEL JAAIVD010000001;XM_032891134 XP_032747025 U4/U6.U5 tri-snRNP-associated protein 1 protein-coding 625883500 LOC116905805 dehydrogenase/reductase SDR family member 7-like 7 86763124 86773765 - 22301074 116905805 MODEL JAAIVD010000026;XM_032908776 XP_032764667 protein-coding 625883508 LOC116883460 LIM zinc-binding domain-containing Nebulette 14 6285494 6474422 + 30032202 116883460 MODEL JAAIVD010000009;XM_032884609;XR_004385762 XP_032740500 protein-coding 625883520 Eda2r ectodysplasin A2 receptor ENCODES a protein that exhibits transmembrane signaling receptor activity (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH anodontia (ortholog); ectodermal dysplasia 1 (ortholog); tooth agenesis (ortholog); FOUND IN plasma membrane (ortholog) X 53830395 53869906 + 22301074;30032202 116889219 MODEL JAAIVD010000014;XM_032890370;XM_032890371;XM_032890372;XM_032890373 XP_032746261;XP_032746262;XP_032746263;XP_032746264 tumor necrosis factor receptor superfamily member 27 protein-coding 625883539 LOC116910666 small nucleolar RNA SNORA64/SNORA10 family 9 2007257 2007390 + 116910666 MODEL JAAIVD010000002;XR_004389198 snorna 625883542 LOC116898538 protein SET-like 4 145607500 145608225 + 116898538 MODEL JAAIVD010000003 pseudo 625883543 Tspan8 tetraspanin 8 ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN negative regulation of blood coagulation (ortholog); regulation of gene expression (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Arterial Occlusive Diseases (ortholog); breast ductal carcinoma (ortholog); FOUND IN cell surface (ortholog) 1 193979495 194011600 + 22301074;30032202 116909091 MODEL JAAIVD010000025;XM_032912565 XP_032768456 tetraspanin-8 protein-coding 625883555 Mid1ip1 MID1 interacting protein 1 ENCODES a protein that exhibits enzyme activator activity (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of microtubule depolymerization (ortholog); positive regulation of fatty acid biosynthetic process (ortholog); positive regulation of ligase activity (ortholog); ASSOCIATED WITH Contracture (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule cytoskeleton (ortholog) X 10323965 10325554 + 30032202 116888848 MODEL JAAIVD010000014;XM_032890116 XP_032746007 mid1-interacting protein 1 protein-coding 625883560 Ints12 integrator complex subunit 12 INVOLVED IN regulation of transcription elongation by RNA polymerase II (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); snRNA processing (ortholog); FOUND IN INTAC complex (ortholog); integrator complex (ortholog); nuclear body (ortholog) 3 25824689 25842062 - 30032202 116896235 MODEL JAAIVD010000012;XM_032897297 XP_032753188 protein-coding 625883571 Prrg2 proline rich and Gla domain 2 FOUND IN plasma membrane (ortholog) 2 154483247 154492424 + 22301074;30032202 116892173 MODEL JAAIVD010000001;XM_032893680;XM_032893681 XP_032749571;XP_032749572 transmembrane gamma-carboxyglutamic acid protein 2 protein-coding 625883586 LOC116912499 glyceraldehyde-3-phosphate dehydrogenase-like 11 18129755 18130371 + 116912499 MODEL JAAIVD010000006 pseudo 625883587 LOC116895889 D-3-phosphoglycerate dehydrogenase-like 3 114348187 114349761 + 116895889 MODEL JAAIVD010000012 pseudo 625883588 Dnase1l1 deoxyribonuclease 1 like 1 FOUND IN endoplasmic reticulum (ortholog) X 128276493 128285466 - 22301074;30032202 116888440 MODEL JAAIVD010000014;XM_032889716;XM_032889717 XP_032745607;XP_032745608 deoxyribonuclease-1-like 1 protein-coding 625883601 Myadm myeloid associated differentiation marker INVOLVED IN cell-cell junction maintenance (ortholog); establishment of endothelial barrier (ortholog); intracellular signal transduction (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cell-cell junction (ortholog); cortical actin cytoskeleton (ortholog); membrane raft (ortholog) 2 177932379 177940926 + 30032202 116892690 MODEL JAAIVD010000001;XM_032894545;XM_032894546;XM_032894547;XM_032894548 XP_032750436;XP_032750437;XP_032750438;XP_032750439 myeloid-associated differentiation marker protein-coding 625883617 LOC116884109 U4 spliceosomal RNA 14 58756935 58757020 + 116884109 MODEL JAAIVD010000009 pseudo 625883618 Zmynd19 zinc finger MYND-type containing 19 FOUND IN cytoplasm (ortholog); membrane (ortholog); synapse (ortholog) 5 12230759 12242314 - 116901331 MODEL JAAIVD010000023;XM_032903151 XP_032759042 zinc finger MYND domain-containing protein 19 protein-coding 625883628 LOC116893340 histone H2A.J-like 2 156322819 156323233 - 116893340 MODEL JAAIVD010000001 pseudo 625883629 LOC116912656 60S ribosomal protein L28-like 11 94302769 94303227 - 116912656 MODEL JAAIVD010000006 pseudo 625883630 LOC116884572 uncharacterized LOC116884572 15 33020600 33024719 + 116884572 MODEL JAAIVD010000010;XR_004385881 ncrna 625883635 LOC116905219 M-phase phosphoprotein 6-like 7 94586809 94587278 - 116905219 MODEL JAAIVD010000026 pseudo 625883636 Dhfr dihydrofolate reductase ENCODES a protein that exhibits dihydrofolate reductase activity (ortholog); dihydrofolic acid binding (ortholog); folate reductase activity (ortholog); INVOLVED IN 'de novo' pyrimidine nucleobase biosynthetic process (ortholog); axon regeneration (ortholog); dihydrofolate metabolic process (ortholog); PARTICIPATES IN altered folate cycle metabolic pathway; dopa responsive dystonia pathway; folate cycle metabolic pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); autistic disorder (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 3 203914132 203936441 - 22301074;30032202 116897301 MODEL JAAIVD010000012;XM_032899042;XM_032899043 XP_032754933;XP_032754934 protein-coding 625883649 LOC116894931 small nucleolar RNA SNORD115 2 140296932 140297010 - 116894931 MODEL JAAIVD010000001;XR_004387130 snorna 625883652 Ca5b carbonic anhydrase 5B ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); FOUND IN mitochondrion (ortholog) X 24563966 24599773 - 22301074;30032202 116889190 MODEL JAAIVD010000014;XM_032890350 XP_032746241 carbonic anhydrase 5B, mitochondrial protein-coding 625883663 Pop4 POP4 ribonuclease P/MRP subunit ENCODES a protein that exhibits ribonuclease P activity (ortholog); ribonuclease P RNA binding (ortholog); INVOLVED IN tRNA 5'-leader removal (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH Ovarian Neoplasms (ortholog); FOUND IN multimeric ribonuclease P complex (ortholog); nucleolus (ortholog) 2 160367927 160376120 + 22301074;30032202 116892250 MODEL JAAIVD010000001;XM_032893821 XP_032749712 POP4 homolog, ribonuclease P/MRP subunit;ribonuclease P protein subunit p29 protein-coding 625883674 Sack1f scaffolding CK1 anchoring protein F ASSOCIATED WITH Asthenozoospermia (ortholog); oligospermia (ortholog); Teratozoospermia (ortholog) 1 250432440 250460758 + 116913816 MODEL JAAIVD010000025;XM_032918131 XP_032774022 Fam83f family with sequence similarity 83 member F;protein FAM83F APPROVED protein-coding 625883683 Shroom3 shroom family member 3 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); columnar/cuboidal epithelial cell development (ortholog); neural tube closure (ortholog); FOUND IN adherens junction (ortholog); apical junction complex (ortholog); apical part of cell (ortholog) 11 5718494 5785073 + 22301074;30032202 116912901 MODEL JAAIVD010000006;XM_032917159 XP_032773050 protein Shroom3 protein-coding 625883697 Myo10 myosin X ENCODES a protein that exhibits spectrin binding (ortholog); INVOLVED IN positive regulation of cell-cell adhesion (ortholog); regulation of cell shape (ortholog); regulation of filopodium assembly (ortholog); ASSOCIATED WITH Weight Gain (ortholog); FOUND IN cytosol (ortholog); filopodium (ortholog); neuron projection (ortholog) 3 155001294 155203732 - 22301074 116897071 MODEL JAAIVD010000012;XM_032898696 XP_032754587 unconventional myosin-X protein-coding 625883742 Atg12 autophagy related 12 INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); macroautophagy (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH Brain Injuries (ortholog); Hereditary Neoplastic Syndromes (ortholog); metabolic dysfunction-associated steatohepatitis (ortholog); FOUND IN Atg12-Atg5-Atg16 complex (ortholog); autophagosome (ortholog); membrane (ortholog) 15 40311008 40320469 + 22301074;30032202 116884961 MODEL JAAIVD010000010;XM_032886165;XM_032886166 XP_032742056;XP_032742057 ubiquitin-like protein ATG12 protein-coding 625883754 LOC116914334 60S ribosomal protein L10a-like 13 48147947 48148400 - 116914334 MODEL JAAIVD010000008 pseudo 625883755 LOC116898465 heterogeneous nuclear ribonucleoprotein A1-like 4 106993394 106995209 + 116898465 MODEL JAAIVD010000003 pseudo 625883756 St8sia3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 ENCODES a protein that exhibits alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity (ortholog); identical protein binding (ortholog); sialyltransferase activity (ortholog); INVOLVED IN ganglioside biosynthetic process (ortholog); glycoprotein biosynthetic process (ortholog); glycoprotein metabolic process (ortholog); FOUND IN Golgi apparatus (ortholog) 15 66999168 67005940 - 30032202 116884721 MODEL JAAIVD010000010;XM_032885908 XP_032741799 sia-alpha-2,3-Gal-beta-1,4-GlcNAc-R:alpha 2,8-sialyltransferase protein-coding 625883764 LOC116894071 olfactory receptor 52R1-like 2 102955422 102956381 + 22301074 116894071 MODEL JAAIVD010000001;XM_032895794 XP_032751685 protein-coding 625883767 LOC116908926 keratin-associated protein 1-3-like 9 54416233 54416769 - 22301074 116908926 MODEL JAAIVD010000002;XM_032912386 XP_032768277 protein-coding 625883770 LOC116891093 40S ribosomal protein S8-like 1 25757012 25758599 - 116891093 MODEL JAAIVD010000025 pseudo 625883771 LOC116913118 magnesium-dependent phosphatase 1 12 69346490 69348216 + 30032202 116913118 MODEL JAAIVD010000007;XM_032917275 XP_032773166 protein-coding 625883781 Nudt16 nudix hydrolase 16 ENCODES a protein that exhibits 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity (ortholog); chloride ion binding (ortholog); cobalt ion binding (ortholog); INVOLVED IN chromosome organization (ortholog); dITP catabolic process (ortholog); mRNA catabolic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 8 96423548 96425032 - 30032202 116907742 MODEL JAAIVD010000027;XM_032910879 XP_032766770 U8 snoRNA-decapping enzyme protein-coding 625883788 Sh2b1 SH2B adaptor protein 1 INVOLVED IN cell motility (ortholog); lamellipodium assembly (ortholog); positive regulation of mitotic nuclear division (ortholog); PARTICIPATES IN leptin system pathway; ASSOCIATED WITH chromosome 16p11.2 deletion syndrome, 220-kb (ortholog); obesity (ortholog); Primary Ovarian Failure (ortholog) 2 75450312 75458798 + 30032202 116891524 MODEL JAAIVD010000001;XM_032892667;XM_032892668;XM_032892669;XM_032892670;XM_032892671;XM_032892672 XP_032748558;XP_032748559;XP_032748560;XP_032748561;XP_032748562;XP_032748563 SH2B adapter protein 1 protein-coding 625883821 Snx22 sorting nexin 22 ASSOCIATED WITH osteogenesis imperfecta (ortholog) 8 60403060 60405974 - 30032202 116906931 MODEL JAAIVD010000027;XM_032909856 XP_032765747 sorting nexin-22 protein-coding 625883831 Poglut3 protein O-glucosyltransferase 3 ENCODES a protein that exhibits UDP-glucosyltransferase activity (ortholog); UDP-xylosyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation via glucose (ortholog) 8 47366509 47384757 + 22301074;30032202 116907172 MODEL JAAIVD010000027;XM_032910126 XP_032766017 protein-coding 625883843 Dnajc10 DnaJ heat shock protein family (Hsp40) member C10 ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); disulfide oxidoreductase activity (ortholog); INVOLVED IN ERAD pathway (ortholog); intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (ortholog); protein folding in endoplasmic reticulum (ortholog); ASSOCIATED WITH disease of cellular proliferation (ortholog); Prostatic Neoplasms (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum chaperone complex (ortholog); endoplasmic reticulum lumen (ortholog) 5 57512267 57551975 + 22301074 116901565 MODEL JAAIVD010000023;XM_032903561 XP_032759452 dnaJ homolog subfamily C member 10 protein-coding 625883870 Yars1 tyrosyl-tRNA synthetase 1 ENCODES a protein that exhibits small molecule binding (ortholog); tyrosine-tRNA ligase activity (ortholog); INVOLVED IN response to starvation (ortholog); tyrosyl-tRNA aminoacylation (ortholog); PARTICIPATES IN phenylketonuria pathway; tyrosinemia type II pathway; tyrosinemia type III pathway; ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease dominant intermediate C (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) 1 28923364 28952262 - 22301074;30032202 116896225 MODEL JAAIVD010000025;XM_032897285 XP_032753176 tyrosine--tRNA ligase, cytoplasmic protein-coding 625883887 F8 coagulation factor VIII INVOLVED IN blood coagulation, intrinsic pathway (ortholog); proteolysis (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH aortic disease (ortholog); autoimmune disease (ortholog); autosomal hemophilia A (ortholog); FOUND IN extracellular region (ortholog) 15 34739555 34770244 - 22301074 116884349 MODEL JAAIVD010000010;XM_032885481 XP_032741372 protein-coding 625883916 Thumpd3 THUMP domain 3 tRNA guanosine methyltransferase ENCODES a protein that exhibits tRNA (guanine(6)-N2)-methyltransferase activity (ortholog); tRNA (guanine(7)-N2)-methyltransferase activity (ortholog); INVOLVED IN tRNA methylation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) 6 33460557 33485862 - 22301074;30032202 116903427 MODEL JAAIVD010000024;XM_032905975;XM_032905976;XM_032905977 XP_032761866;XP_032761867;XP_032761868 THUMP domain containing 3;THUMP domain-containing protein 3 protein-coding 625883939 Txnrd3 thioredoxin reductase 3 ENCODES a protein that exhibits thioredoxin-disulfide reductase (NADPH) activity (ortholog); INVOLVED IN blastocyst formation (ortholog); glutathione metabolic process (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); colorectal adenoma (ortholog); colorectal carcinoma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 6 56697251 56727565 - 22301074;30032202 116903512 MODEL JAAIVD010000024;XM_032906117 XP_032762008 protein-coding 625883959 LOC116897522 small nucleolar RNA SNORA48 3 122319181 122319323 - 116897522 MODEL JAAIVD010000012;XR_004387538 snorna 625883962 Gne glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase ENCODES a protein that exhibits N-acylmannosamine kinase activity (ortholog); UDP-N-acetylglucosamine 2-epimerase activity (ortholog); INVOLVED IN CMP-N-acetylneuraminate biosynthetic process (ortholog); N-acetylneuraminate biosynthetic process (ortholog); N-acetylneuraminate metabolic process (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; sialic acid storage disease pathway; ASSOCIATED WITH distal myopathy with rimmed vacuoles (ortholog); French Type Sialuria (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog) 1 2441116 2481716 + 22301074;30032202 116890906 MODEL JAAIVD010000025;XM_032891529 XP_032747420 bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase protein-coding 625883978 Ankrd42 ankyrin repeat domain 42 ENCODES a protein that exhibits NF-kappaB binding (ortholog); INVOLVED IN obsolete positive regulation of DNA-binding transcription factor activity (ortholog); obsolete positive regulation of NF-kappaB transcription factor activity (ortholog); positive regulation of cytokine production involved in inflammatory response (ortholog); FOUND IN nucleus (ortholog) 2 108551548 108603349 + 22301074 116891847 MODEL JAAIVD010000001;XM_032893216;XM_032893217 XP_032749107;XP_032749108 ankyrin repeat domain-containing protein 42 protein-coding 625883998 LOC116906918 collagen alpha-4(VI) chain-like 8 97290365 97385695 - 116906918 MODEL JAAIVD010000027;XM_032909842 XP_032765733 protein-coding 625884035 Foxk1 forkhead box K1 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN canonical glycolysis (ortholog); intracellular glucose homeostasis (ortholog); negative regulation of autophagy (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 16 10687922 10746335 - 22301074;30032202 116885443 MODEL JAAIVD010000004;XM_032886726 XP_032742617 forkhead box protein K1 protein-coding 625884048 LOC116887587 heat shock 70 kDa protein 1A-like 18 7022228 7027565 - 116887587 MODEL JAAIVD010000013 pseudo 625884049 LOC116910363 high mobility group protein B2-like 9 74175220 74180300 - 116910363 MODEL JAAIVD010000002 pseudo 625884050 LOC116908103 40S ribosomal protein S10-like 8 64246153 64246646 + 116908103 MODEL JAAIVD010000027 pseudo 625884051 LOC116885734 paired immunoglobulin-like type 2 receptor beta 16 15888556 15890531 + 30032202 116885734 MODEL JAAIVD010000004;XM_032887044 XP_032742935 protein-coding 625884057 LOC116884013 threonylcarbamoyladenosine tRNA methylthiotransferase-like 14 48380798 48412181 - 116884013 MODEL JAAIVD010000009;XM_032885252 XP_032741143 protein-coding 625884064 St6galnac6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 ENCODES a protein that exhibits alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity (ortholog); sialyltransferase activity (ortholog); INVOLVED IN cell-cell recognition (ortholog); ganglioside biosynthetic process (ortholog); glycoprotein metabolic process (ortholog); FOUND IN cytoplasm (ortholog) 5 3021332 3043034 - 30032202 116901139 MODEL JAAIVD010000023;XM_032902740;XM_032902741;XM_032902742;XM_032902744 XP_032758631;XP_032758632;XP_032758633;XP_032758635 alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 protein-coding 625884089 Gpr21 G protein-coupled receptor 21 INVOLVED IN glucose homeostasis (ortholog); negative regulation of insulin receptor signaling pathway (ortholog); positive regulation of multicellular organism growth (ortholog) 5 15279340 15280781 + 22301074 116901358 MODEL JAAIVD010000023;XM_032903210 XP_032759101 probable G-protein coupled receptor 21 protein-coding 625884094 LOC116910377 WAP four-disulfide core domain protein 5-like 9 86972663 86984601 - 22301074;30032202 116910377 MODEL JAAIVD010000002;XM_032914223 XP_032770114 protein-coding 625884102 LOC116894349 60S ribosomal protein L19-like 2 154863236 154864099 - 116894349 MODEL JAAIVD010000001 pseudo 625884103 LOC116902515 U7 small nuclear RNA 5 25058330 25058392 + 116902515 MODEL JAAIVD010000023;XR_004388124 snrna 625884106 Tmem161b transmembrane protein 161B INVOLVED IN regulation of cardiac muscle cell action potential (ortholog); regulation of heart rate (ortholog) 3 213663967 213745251 + 116897328 MODEL JAAIVD010000012;XM_032899082;XM_032899083;XM_032899084 XP_032754973;XP_032754974;XP_032754975 protein-coding 625884128 LOC116897716 uncharacterized LOC116897716 4 74736882 74879826 + 116897716 MODEL JAAIVD010000003;XR_004387624 ncrna 625884132 Fam89b family with sequence similarity 89 member B ENCODES a protein that exhibits transcription corepressor binding (ortholog); INVOLVED IN establishment of cell polarity (ortholog); negative regulation of SMAD protein signal transduction (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); FOUND IN cytoplasm (ortholog); lamellipodium (ortholog) 2 1964314 1966522 + 30032202 116890698 MODEL JAAIVD010000001;XM_032891117 XP_032747008 leucine repeat adapter protein 25 protein-coding 625884138 LOC116894202 olfactory receptor 491 2 106332968 106333900 + 22301074;30032202 116894202 MODEL JAAIVD010000001;XM_032895915 XP_032751806 protein-coding 625884141 Hsp90aa1 heat shock protein 90 alpha family class A member 1 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); ATP binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN activation of innate immune response (ortholog); cardiac muscle cell apoptotic process (ortholog); cellular response to heat (ortholog); PARTICIPATES IN aldosterone signaling pathway; androgen signaling pathway; chaperone mediated autophagy pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); anaplastic large cell lymphoma (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN apical plasma membrane (ortholog); axonal growth cone (ortholog); basolateral plasma membrane (ortholog) 7 128255520 128260875 - 22301074;30032202 116905477 MODEL JAAIVD010000026;XM_032908447 XP_032764338 heat shock protein HSP 90-alpha protein-coding 625884156 LOC116885231 cytochrome c oxidase subunit 6B1-like 16 24010893 24011196 + 116885231 MODEL JAAIVD010000004 pseudo 625884157 Aggf1 angiogenic factor with G-patch and FHA domains 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cell adhesion (ortholog); positive regulation of angiogenesis (ortholog); positive regulation of endothelial cell proliferation (ortholog); ASSOCIATED WITH syndactyly (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); perinuclear region of cytoplasm (ortholog) 3 200953012 200979296 + 22301074 116897279 MODEL JAAIVD010000012;XM_032899012 XP_032754903 angiogenic factor with G patch and FHA domains 1 protein-coding 625884175 LOC116906439 small nucleolar RNA SNORA17 7 48209193 48209324 + 116906439 MODEL JAAIVD010000026;XR_004388699 snorna 625884178 Draxin dorsal inhibitory axon guidance protein ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN anterior commissure morphogenesis (ortholog); axon guidance (ortholog); commissural neuron differentiation in spinal cord (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Parkinson's disease (ortholog); FOUND IN extracellular region (ortholog) 1 12663686 12677700 + 22301074;30032202 116886184 MODEL JAAIVD010000025;XM_032887557 XP_032743448 protein-coding 625884189 Smim35 small integral membrane protein 35 8 39775244 39783863 + 116908158 MODEL JAAIVD010000027;XM_032911459 XP_032767350 protein-coding 625884196 LOC116893892 apoptosis-associated speck-like protein containing a CARD 2 73906768 73907974 + 22301074 116893892 MODEL JAAIVD010000001;XM_032895611 XP_032751502 protein-coding 625884203 Bahcc1 BAH domain and coiled-coil containing 1 INVOLVED IN chromatin organization (ortholog); locomotory behavior (ortholog); neuron differentiation (ortholog) 9 63712549 63770760 - 22301074 116908862 MODEL JAAIVD010000002;XM_032912304 XP_032768195 BAH and coiled-coil domain-containing protein 1 protein-coding 625884234 LOC116894513 vomeronasal type-1 receptor 90-like 2 173813981 173814934 - 22301074;30032202 116894513 MODEL JAAIVD010000001;XM_032896214 XP_032752105 protein-coding 625884237 Atg10 autophagy related 10 ENCODES a protein that exhibits Atg12 conjugating enzyme activity (ortholog); Atg12 transferase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); ER overload response (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH Breast Neoplasms (ortholog) 3 205162165 205286691 + 30032202 116896061 MODEL JAAIVD010000012;XM_032897052 XP_032752943 ubiquitin-like-conjugating enzyme ATG10 protein-coding 625884247 Senp7 SUMO specific peptidase 7 ENCODES a protein that exhibits SUMO-specific endopeptidase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); protein desumoylation (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 4 40188021 40314270 + 30032202 116898902 MODEL JAAIVD010000003;XM_032900304 XP_032756195 sentrin-specific protease 7 protein-coding 625884275 Abcb4 ATP binding cassette subfamily B member 4 ENCODES a protein that exhibits ATPase-coupled transmembrane transporter activity (ortholog); ceramide floppase activity (ortholog); phosphatidylcholine floppase activity (ortholog); INVOLVED IN bile acid secretion (ortholog); cellular response to bile acid (ortholog); ceramide translocation (ortholog); PARTICIPATES IN multidrug resistance protein mediated transport pathway; ASSOCIATED WITH Animal Disease Models (ortholog); cholangitis (ortholog); cholecystitis (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) 6 140576553 140792492 + 22301074;30032202 116904143 MODEL JAAIVD010000024;XM_032907035;XM_032907036;XM_032907037;XM_032907038 XP_032762926;XP_032762927;XP_032762928;XP_032762929 phosphatidylcholine translocator ABCB4 protein-coding 625884346 LOC116900460 olfactory receptor 4A15-like 5 71210576 71211529 - 22301074 116900460 MODEL JAAIVD010000023;XM_032902201 XP_032758092 protein-coding 625884350 Klhl38 kelch like family member 38 1 232858724 232867304 - 22301074 116890104 MODEL JAAIVD010000025;XM_032890851 XP_032746742 kelch-like protein 38 protein-coding 625884358 LOC116890268 arylacetamide deacetylase-like 4 1 14217902 14226649 + 22301074 116890268 MODEL JAAIVD010000025;XM_032890986 XP_032746877 protein-coding 625884364 LOC116892895 zinc finger protein 728-like 2 199539056 199607909 + 30032202 116892895 MODEL JAAIVD010000001;XM_032894806;XM_032894807 XP_032750697;XP_032750698 protein-coding 625884380 Ptp4a3 protein tyrosine phosphatase 4A3 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); endothelial cell migration (ortholog); Notch signaling pathway (ortholog); ASSOCIATED WITH Colonic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 1 246485116 246516705 + 22301074;30032202 116912465 MODEL JAAIVD010000025;XM_032916535;XM_032916540;XM_032916546 XP_032772426;XP_032772431;XP_032772437 protein tyrosine phosphatase type IVA 3 protein-coding 625884396 Ube2v2 ubiquitin conjugating enzyme E2 V2 INVOLVED IN DNA double-strand break processing (ortholog); error-free postreplication DNA repair (ortholog); negative regulation of neuron apoptotic process (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); UBC13-MMS2 complex (ortholog) 4 910259 941249 - 30032202 116898603 MODEL JAAIVD010000003;XM_032899798;XM_032899799;XM_032899800 XP_032755689;XP_032755690;XP_032755691 ubiquitin-conjugating enzyme E2 variant 2 protein-coding 625884410 LOC116898775 cytochrome P450 4A12-like 1 41401498 41420196 + 22301074;30032202 116898775 MODEL JAAIVD010000025;XM_032900115 XP_032756006 protein-coding 625884424 Trnag-gcc transfer RNA glycine (anticodon GCC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 17 30340082 30340152 - 116886807 MODEL JAAIVD010000011 trna 625884425 Rnf148 ring finger protein 148 6 115614012 115615396 + 116904041 MODEL JAAIVD010000024;XM_032906897 XP_032762788 protein-coding 625884430 LOC116906426 small nucleolar RNA SNORA32 7 80707707 80707824 + 116906426 MODEL JAAIVD010000026;XR_004388687 snorna 625884433 LOC116897111 eukaryotic translation initiation factor 4B-like 3 164796192 164798041 - 116897111 MODEL JAAIVD010000012;XR_004387398 pseudo 625884436 Slc10a3 solute carrier family 10 member 3 INVOLVED IN response to retinoic acid (ortholog) X 128374861 128378414 - 22301074;30032202 116888550 MODEL JAAIVD010000014;XM_032889859 XP_032745750 P3 protein protein-coding 625884442 LOC116889372 elongation factor 1-gamma-like 1 5020448 5027240 + 116889372 MODEL JAAIVD010000025 pseudo 625884443 LOC116892718 uncharacterized LOC116892718 2 179177615 179374613 - 116892718 MODEL JAAIVD010000001;XR_004386966 ncrna 625884449 LOC116897659 U4 spliceosomal RNA 3 30574961 30575063 - 116897659 MODEL JAAIVD010000012 pseudo 625884450 Sik1 salt inducible kinase 1 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); ATP binding (ortholog); cAMP response element binding protein binding (ortholog); INVOLVED IN anoikis (ortholog); cardiac muscle cell differentiation (ortholog); entrainment of circadian clock by photoperiod (ortholog); ASSOCIATED WITH Cold Injury (ortholog); developmental and epileptic encephalopathy 30 (ortholog); Developmental Disabilities (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 18 1997054 2008471 + 22301074;30032202 116887158 MODEL JAAIVD010000013;XM_032888705;XM_032888706 XP_032744596;XP_032744597 serine/threonine-protein kinase SIK1 protein-coding 625884471 Lhx1 LIM homeobox 1 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); anatomical structure morphogenesis (ortholog); anterior/posterior axis specification (ortholog); ASSOCIATED WITH Female Urogenital Diseases (ortholog); genetic disease (ortholog); FOUND IN nucleus (ortholog); protein-containing complex (ortholog); transcription regulator complex (ortholog) 9 86168800 86175595 + 22301074;30032202 116909971 MODEL JAAIVD010000002;XM_032913750 XP_032769641 LIM/homeobox protein Lhx1 protein-coding 625884480 LOC116885886 olfactory receptor 2AE1 16 15376825 15377756 - 22301074 116885886 MODEL JAAIVD010000004;XM_032887205 XP_032743096 protein-coding 625884483 LOC116910534 60S ribosomal protein L7a-like 9 2088891 2089734 + 116910534 MODEL JAAIVD010000002 pseudo 625884484 LOC116886596 metallothionein-1X-like 17 8098509 8116601 - 116886596 MODEL JAAIVD010000011 pseudo 625884485 Iqgap1 IQ motif containing GTPase activating protein 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calmodulin binding (ortholog); MAP kinase scaffold activity (ortholog); INVOLVED IN caveola assembly (ortholog); cell migration (ortholog); cellular response to calcium ion (ortholog); PARTICIPATES IN E-cadherin signaling pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH Brain Neoplasms (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) 2 119431468 119523287 + 22301074;30032202 116891912 MODEL JAAIVD010000001;XM_032893334 XP_032749225 ras GTPase-activating-like protein IQGAP1 protein-coding 625884527 Bicd2 BICD cargo adaptor 2 ENCODES a protein that exhibits dynactin binding (ortholog); dynein complex binding (ortholog); dynein light intermediate chain binding (ortholog); INVOLVED IN centrosome localization (ortholog); microtubule anchoring at microtubule organizing center (ortholog); microtubule-based movement (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); autism spectrum disorder (ortholog); autosomal dominant distal hereditary motor neuronopathy (ortholog); FOUND IN annulate lamellae (ortholog); centrosome (ortholog); cytoplasm (ortholog) 14 68329203 68372753 + 22301074;30032202 116883302 MODEL JAAIVD010000009;XM_032884349 XP_032740240 protein bicaudal D homolog 2 protein-coding 625884538 LOC116884770 uncharacterized LOC116884770 15 8811967 8815174 - 116884770 MODEL JAAIVD010000010;XR_004385894 ncrna 625884543 Gsn gelsolin ENCODES a protein that exhibits actin binding (ortholog); calcium ion binding (ortholog); myosin II binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament capping (ortholog); actin filament depolymerization (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; N-cadherin signaling pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Acute Liver Failure (ortholog); amyloidosis (ortholog); FOUND IN actin cap (ortholog); actin cytoskeleton (ortholog); apical ectoplasmic specialization (ortholog) 5 330843 358236 - 22301074;30032202 116901102 MODEL JAAIVD010000023;XM_032902665 XP_032758556 protein-coding 625884564 LOC116885076 U4 spliceosomal RNA 15 61213462 61213620 + 116885076 MODEL JAAIVD010000010 pseudo 625884565 LOC116900240 fatty acid desaturase 2-like protein FADS2P1 5 62823383 62861601 - 22301074;30032202 116900240 MODEL JAAIVD010000023;XM_032901991 XP_032757882 protein-coding 625884579 LOC116885540 uncharacterized LOC116885540 16 41750573 41757360 + 116885540 MODEL JAAIVD010000004;XR_004386016;XR_004386017;XR_004386018;XR_004386019 ncrna 625884590 Tuba3d tubulin alpha 3d ASSOCIATED WITH Keratoconus 9 (ortholog); FOUND IN cilium (ortholog); microtubule cytoskeleton (ortholog) 10 8700766 8702088 + 22301074;30032202 116911238 MODEL JAAIVD010000005;XM_032915138 XP_032771029 tubulin alpha-3D chain protein-coding 625884594 Ubr2 ubiquitin protein ligase E3 component n-recognin 2 ENCODES a protein that exhibits histone H2A ubiquitin ligase activity (ortholog); L-leucine binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN cellular response to L-leucine (ortholog); heterochromatin formation (ortholog); male meiosis I (ortholog); FOUND IN chromatin (ortholog); ubiquitin ligase complex (ortholog) 4 82866601 82945676 + 22301074;30032202 116899091 MODEL JAAIVD010000003;XM_032900593;XM_032900594;XM_032900596;XM_032900597;XM_032900598;XM_032900599 XP_032756484;XP_032756485;XP_032756487;XP_032756488;XP_032756489;XP_032756490 E3 ubiquitin-protein ligase UBR2 protein-coding 625884662 LOC116889277 ferritin heavy chain-like X 44073155 44073821 + 116889277 MODEL JAAIVD010000014 pseudo 625884663 LOC116883336 uncharacterized protein C11orf98 homolog 14 52927982 52928591 - 116883336 MODEL JAAIVD010000009;XM_032884407 XP_032740298 protein-coding 625884667 Tomm20l translocase of outer mitochondrial membrane 20 like 7 84747003 84756992 + 22301074;30032202 116906121 MODEL JAAIVD010000026;XM_032909119 XP_032765010 TOMM20-like protein 1 protein-coding 625884674 Iqcf2 IQ motif containing F2 8 97824037 97824417 - 30032202 116908258 MODEL JAAIVD010000027;XM_032911511 XP_032767402 IQ domain-containing protein F2 protein-coding 625884677 LOC116888467 T-complex protein 1 subunit zeta-like 1 92535499 92537719 + 116888467 MODEL JAAIVD010000025 pseudo 625884678 Tomm40l translocase of outer mitochondrial membrane 40 like ENCODES a protein that exhibits mitochondrion targeting sequence binding (ortholog); preprotein binding (ortholog); FOUND IN mitochondrial outer membrane translocase complex (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) 10 50383508 50387016 - 22301074;30032202 116911186 MODEL JAAIVD010000005;XM_032915054 XP_032770945 mitochondrial import receptor subunit TOM40B protein-coding 625884692 LOC116906639 myocardial zonula adherens protein-like 8 65775951 65888088 - 22301074;30032202 116906639 MODEL JAAIVD010000027;XM_032909416 XP_032765307 protein-coding 625884711 LOC116903566 probable N-acetyltransferase CML5 6 60481431 60482260 + 30032202 116903566 MODEL JAAIVD010000024;XM_032906185 XP_032762076 protein-coding 625884716 Atad1 ATPase family AAA domain containing 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); INVOLVED IN extraction of mislocalized protein from mitochondrial outer membrane (ortholog); learning (ortholog); memory (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH genetic disease (ortholog); hyperekplexia 4 (ortholog); FOUND IN glutamatergic synapse (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 2 32711279 32748948 - 22301074;30032202 116891095 MODEL JAAIVD010000001;XM_032891810 XP_032747701 ATPase family AAA domain-containing protein 1 protein-coding 625884730 Mrpl45 mitochondrial ribosomal protein L45 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN mitochondrial translation (ortholog); ASSOCIATED WITH atherosclerosis (ortholog); FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 9 57057702 57069624 - 30032202 116909779 MODEL JAAIVD010000002;XM_032913472 XP_032769363 39S ribosomal protein L45, mitochondrial protein-coding 625884742 Kiaa0040 KIAA0040 ortholog 10 39360472 39364023 + 116911669 MODEL JAAIVD010000005;XM_032915624 XP_032771515 uncharacterized protein KIAA0040 homolog protein-coding 625884747 LOC116898520 proteasome subunit alpha type-7-like 4 135067635 135080929 + 116898520 MODEL JAAIVD010000003 pseudo 625884748 Crabp2 cellular retinoic acid binding protein 2 ENCODES a protein that exhibits cyclin binding (ortholog); retinoic acid binding (ortholog); INVOLVED IN embryonic forelimb morphogenesis (ortholog); positive regulation of collateral sprouting (ortholog); retinoic acid metabolic process (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; ASSOCIATED WITH methylmalonic acidemia (ortholog); Ovarian Neoplasms (ortholog); Recurrence (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 3 65603749 65608755 - 30032202 116896707 MODEL JAAIVD010000012;XM_032898122 XP_032754013 cellular retinoic acid-binding protein 2 protein-coding 625884756 LOC116894259 olfactory receptor 6F1 2 115424085 115425011 - 22301074;30032202 116894259 MODEL JAAIVD010000001;XM_032895963 XP_032751854 protein-coding 625884759 Katnal2 katanin catalytic subunit A1 like 2 ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytoplasm (ortholog); intermediate filament cytoskeleton (ortholog); microtubule (ortholog) 15 55011661 55084804 + 22301074;30032202 116884557 MODEL JAAIVD010000010;XM_032885698 XP_032741589 katanin p60 ATPase-containing subunit A-like 2 protein-coding 625884779 Anks3 ankyrin repeat and sterile alpha motif domain containing 3 ASSOCIATED WITH Dwarfism (ortholog); Hydrops Fetalis (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog) 9 16943436 16964671 + 22301074;30032202 116909818 MODEL JAAIVD010000002;XM_032913530;XM_032913531;XM_032913532 XP_032769421;XP_032769422;XP_032769423 ankyrin repeat and SAM domain-containing protein 3 protein-coding 625884809 Trib2 tribbles pseudokinase 2 ENCODES a protein that exhibits nucleotide binding (ortholog); protein kinase activity (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN negative regulation of fat cell differentiation (ortholog); negative regulation of interleukin-10 production (ortholog); positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytoplasm (ortholog) 7 35592314 35616593 - 22301074;30032202 116904890 MODEL JAAIVD010000026;XM_032907491 XP_032763382 tribbles homolog 2 protein-coding 625884816 LOC116913456 guanylate cyclase soluble subunit beta-2 12 61957171 62026036 + 22301074;30032202 116913456 MODEL JAAIVD010000007;XM_032917657;XM_032917658 XP_032773548;XP_032773549 protein-coding 625884841 LOC116893852 olfactory receptor 13G1-like 2 61379090 61380016 - 22301074 116893852 MODEL JAAIVD010000001;XM_032895572 XP_032751463 protein-coding 625884845 Caly calcyon neuron specific vesicular protein ENCODES a protein that exhibits clathrin light chain binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); clathrin coat assembly (ortholog); positive regulation of clathrin coat assembly (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); attention deficit hyperactivity disorder (ortholog); essential hypertension (ortholog); FOUND IN axon (ortholog); cytoplasmic vesicle (ortholog); glutamatergic synapse (ortholog) 2 61785139 61796100 + 22301074;30032202 116891352 MODEL JAAIVD010000001;XM_032892345;XM_032892346 XP_032748236;XP_032748237 neuron-specific vesicular protein calcyon protein-coding 625884858 Syt14 synaptotagmin 14 ENCODES a protein that exhibits identical protein binding (ortholog); phospholipid binding (ortholog); ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 11 (ortholog); Spinocerebellar Ataxias (ortholog) 10 70849149 71080184 - 116911154 MODEL JAAIVD010000005;XM_032915009;XM_032915010;XM_032915011;XM_032915012;XM_032915013;XM_032915014 XP_032770900;XP_032770901;XP_032770902;XP_032770903;XP_032770904;XP_032770905 synaptotagmin-14 protein-coding 625884884 Krt222 keratin 222 9 55201179 55211387 + 22301074 116909695 MODEL JAAIVD010000002;XM_032913359;XM_032913360 XP_032769250;XP_032769251 keratin-like protein KRT222 protein-coding 625884897 Emb embigin INVOLVED IN cell adhesion (ortholog); plasma membrane lactate transport (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN plasma membrane (ortholog) 3 179309178 179356724 + 30032202 116897175 MODEL JAAIVD010000012;XM_032898860 XP_032754751 protein-coding 625884910 Bcl2l11 BCL2 like 11 ENCODES a protein that exhibits dynein complex binding (ortholog); microtubule binding (ortholog); protein kinase binding (ortholog); INVOLVED IN apoptotic process involved in embryonic digit morphogenesis (ortholog); B cell homeostasis (ortholog); cell-matrix adhesion (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH Familial Prostate Cancer (ortholog); glomerulonephritis (ortholog); sclerosing cholangitis (ortholog); FOUND IN Bcl-2 family protein complex (ortholog); BIM-BCL-2 complex (ortholog); BIM-BCL-xl complex (ortholog) 5 106918572 107080263 + 30032202 116901944 MODEL JAAIVD010000023;XM_032904177;XM_032904178 XP_032760068;XP_032760069 bcl-2-like protein 11 protein-coding 625884925 LOC116910229 olfactory receptor 2M3-like 9 31821187 31822125 + 22301074 116910229 MODEL JAAIVD010000002;XM_032914119 XP_032770010 protein-coding 625884928 Tomm34 translocase of outer mitochondrial membrane 34 ENCODES a protein that exhibits heat shock protein binding (ortholog); INVOLVED IN protein import into mitochondrial matrix (ortholog); FOUND IN cytosol (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 5 153906829 153923261 + 30032202 116902368 MODEL JAAIVD010000023;XM_032904863;XM_032904864 XP_032760754;XP_032760755 mitochondrial import receptor subunit TOM34 protein-coding 625884942 Kifc3 kinesin family member C3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN epithelial cell-cell adhesion (ortholog); Golgi organization (ortholog); microtubule-based process (ortholog); PARTICIPATES IN E-cadherin signaling pathway; FOUND IN centrosome (ortholog); Golgi apparatus (ortholog); kinesin complex (ortholog) 17 1974346 2071545 - 22301074;30032202 116886181 MODEL JAAIVD010000011;XM_032887550;XM_032887551 XP_032743441;XP_032743442 kinesin-like protein KIFC3 protein-coding 625884970 LOC116894064 olfactory receptor 51A7-like 2 102869245 102870201 - 22301074 116894064 MODEL JAAIVD010000001;XM_032895787 XP_032751678 protein-coding 625884973 LOC116905467 uncharacterized LOC116905467 7 127209061 127223122 + 116905467 MODEL JAAIVD010000026;XR_004388539 ncrna 625884978 LOC116895501 small nuclear ribonucleoprotein G-like 1 28659482 28659743 + 116895501 MODEL JAAIVD010000025 pseudo 625884979 LOC116895953 serine/arginine repetitive matrix protein 1-like 3 139428501 139429795 + 116895953 MODEL JAAIVD010000012 pseudo 625884980 LOC116897458 U6 spliceosomal RNA 3 168933885 168933981 + 116897458 MODEL JAAIVD010000012 pseudo 625884981 Malsu1 mitochondrial assembly of ribosomal large subunit 1 ENCODES a protein that exhibits mitochondrial large ribosomal subunit binding (ortholog); INVOLVED IN mitochondrial large ribosomal subunit assembly (ortholog); negative regulation of mitochondrial translation (ortholog); ribosomal large subunit biogenesis (ortholog); FOUND IN mitochondrion (ortholog) 6 91891747 91900626 - 30032202 116903837 MODEL JAAIVD010000024;XM_032906554 XP_032762445 mitochondrial assembly of ribosomal large subunit protein 1 protein-coding 625884989 LOC116889704 type-1 restriction enzyme R protein-like 116889704 MODEL JAAIVD010000057;XM_032890586 XP_032746477 protein-coding 625884990 Myoc myocilin ENCODES a protein that exhibits fibronectin binding (ortholog); frizzled binding (ortholog); myosin light chain binding (ortholog); INVOLVED IN bone development (ortholog); cellular response to nerve growth factor stimulus (ortholog); clustering of voltage-gated sodium channels (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); buphthalmos (ortholog); congestive heart failure (ortholog); FOUND IN cytoplasmic vesicle (ortholog); endoplasmic reticulum (ortholog); extracellular region (ortholog) 10 41900497 41911292 + 30032202 116911344 MODEL JAAIVD010000005;XM_032915260 XP_032771151 protein-coding 625884997 LOC116904976 non-POU domain-containing octamer-binding protein-like 7 49435293 49436828 + 116904976 MODEL JAAIVD010000026 pseudo 625884998 Tex13a testis expressed 13A X 90599834 90601100 + 116888369 MODEL JAAIVD010000014;XM_032889637 XP_032745528 testis-expressed protein 13A protein-coding 625885003 Gcm1 glial cells missing transcription factor 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN astrocyte fate commitment (ortholog); branching involved in labyrinthine layer morphogenesis (ortholog); cell differentiation involved in embryonic placenta development (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) 8 72296251 72309422 + 30032202 116907931 MODEL JAAIVD010000027;XM_032911145 XP_032767036 chorion-specific transcription factor GCMa protein-coding 625885013 LOC116886146 zinc finger BED domain-containing protein 4-like 1 215329479 215340568 - 116886146 MODEL JAAIVD010000025 pseudo 625885014 Acacb acetyl-CoA carboxylase beta ENCODES a protein that exhibits acetyl-CoA carboxylase activity (ortholog); biotin binding (ortholog); identical protein binding (ortholog); INVOLVED IN acetyl-CoA metabolic process (ortholog); D-glucose import across plasma membrane (ortholog); energy homeostasis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Neoplasms (ortholog); Cardiac Fibrosis (ortholog); FOUND IN mitochondrial fatty acid beta-oxidation multienzyme complex (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 16 39714187 39801434 - 22301074;30032202 116885538 MODEL JAAIVD010000004;XM_032886835 XP_032742726 acetyl-CoA carboxylase 2 protein-coding 625885070 Mtnr1a melatonin receptor 1A ENCODES a protein that exhibits hormone binding (ortholog); melatonin receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); camera-type eye development (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); autism spectrum disorder (ortholog); Huntington's disease (ortholog); FOUND IN neuronal cell body (ortholog); plasma membrane (ortholog); signaling receptor complex (ortholog) 13 42764680 42783905 - 22301074;30032202 116914896 MODEL JAAIVD010000008;XM_032919339 XP_032775230 melatonin receptor type 1A protein-coding 625885076 Tmem192 transmembrane protein 192 ENCODES a protein that exhibits protein homodimerization activity (ortholog); FOUND IN endoplasmic reticulum (ortholog); endosome (ortholog); Golgi apparatus (ortholog) 13 24152699 24172424 - 30032202 116914730 MODEL JAAIVD010000008;XM_032919163 XP_032775054 protein-coding 625885086 Plek2 pleckstrin 2 ENCODES a protein that exhibits phosphatidylinositol-3,4-bisphosphate binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); positive regulation of cell projection organization (ortholog); positive regulation of plasma membrane bounded cell projection assembly (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) 7 93000606 93020797 - 22301074;30032202 116905200 MODEL JAAIVD010000026;XM_032907996 XP_032763887 pleckstrin-2 protein-coding 625885100 LOC116903186 T-cell surface glycoprotein YE1/48-like 6 17224389 17262092 - 116903186 MODEL JAAIVD010000024;XM_032905559;XM_032905560 XP_032761450;XP_032761451 killer cell lectin-like receptor 4 protein-coding 625885111 LOC116895802 uncharacterized LOC116895802 3 65347199 65349746 - 116895802 MODEL JAAIVD010000012;XM_032896942 XP_032752833 uncharacterized protein LOC116895802 protein-coding 625885115 LOC116906153 enhancer of rudimentary homolog 7 97847234 97850847 + 116906153 MODEL JAAIVD010000026 pseudo 625885116 Dmrta1 DMRT like family A1 ENCODES a protein that exhibits identical protein binding (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN male mating behavior (ortholog); ovarian follicle development (ortholog) 1 64600641 64607177 - 22301074;30032202 116887913 MODEL JAAIVD010000025;XM_032889385 XP_032745276 doublesex- and mab-3-related transcription factor A1 protein-coding 625885122 Sox12 SRY-box transcription factor 12 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN positive regulation of regulatory T cell differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); spinal cord development (ortholog); FOUND IN nucleoplasm (ortholog); protein-DNA complex (ortholog) 5 131710307 131713483 - 22301074;30032202 116902121 MODEL JAAIVD010000023;XM_032904436 XP_032760327 transcription factor SOX-12 protein-coding 625885127 LOC116898027 60S ribosomal protein L5-like 4 80605073 80606630 + 116898027 MODEL JAAIVD010000003 pseudo 625885128 LOC116899912 small nucleolar RNA U13 4 30506129 30506236 + 116899912 MODEL JAAIVD010000003;XR_004387884 snorna 625885131 Fabp3 fatty acid binding protein 3 ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); fatty acid binding (ortholog); icosatetraenoic acid binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); cholesterol homeostasis (ortholog); fatty acid metabolic process (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Down syndrome (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN extracellular region (ortholog); sarcoplasm (ortholog) 1 27839923 27846775 - 30032202 116895957 MODEL JAAIVD010000025;XM_032897011 XP_032752902 fatty acid-binding protein, heart protein-coding 625885139 LOC116915039 40S ribosomal protein S10-like 13 20415744 20416236 - 116915039 MODEL JAAIVD010000008 pseudo 625885140 LOC116901493 uncharacterized LOC116901493 5 47174286 47185800 - 116901493 MODEL JAAIVD010000023;XR_004388001 ncrna 625885145 Selenon selenoprotein N INVOLVED IN ATP metabolic process (ortholog); calcium ion homeostasis (ortholog); calcium ion import (ortholog); ASSOCIATED WITH congenital myopathy 4A (ortholog); congenital myopathy 4B (ortholog); congenital structural myopathy (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); mitochondria-associated endoplasmic reticulum membrane contact site (ortholog) 1 23700777 23715338 + 22301074;30032202 116894683 MODEL JAAIVD010000025;XM_032896387 XP_032752278 protein-coding 625885161 Pxdn peroxidasin ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); heme binding (ortholog); laminin-1 binding (ortholog); INVOLVED IN angiogenesis (ortholog); basement membrane assembly (ortholog); basement membrane organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anterior segment dysgenesis (ortholog); anterior segment dysgenesis 7 (ortholog); FOUND IN basement membrane (ortholog); cell surface (ortholog); endoplasmic reticulum (ortholog) 7 43374885 43452944 + 22301074;30032202 116904938 MODEL JAAIVD010000026;XM_032907578 XP_032763469 peroxidasin homolog protein-coding 625885188 LOC116907247 60S ribosomal protein L7a-like 8 81133067 81133873 - 116907247 MODEL JAAIVD010000027 pseudo 625885189 LOC116904226 histone-lysine N-methyltransferase 2C-like 6 154508446 154513686 - 116904226 MODEL JAAIVD010000024;XM_032907164 XP_032763055 protein-coding 625885196 Znf536 zinc finger protein 536 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH High Myopia (ortholog); Neurodevelopmental Disorders (ortholog); renal cell carcinoma (ortholog) 2 160866606 161331225 + 30032202 116892253 MODEL JAAIVD010000001;XM_032893829;XM_032893830;XM_032893831;XM_032893832;XM_032893833;XM_032893834 XP_032749720;XP_032749721;XP_032749722;XP_032749723;XP_032749724;XP_032749725 protein-coding 625885221 Nr2c2 nuclear receptor subfamily 2 group C member 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cerebellum development (ortholog); lipopolysaccharide-mediated signaling pathway (ortholog); meiotic cell cycle (ortholog); ASSOCIATED WITH endometriosis (ortholog); Isolated Noncompaction of the Ventricular Myocardium (ortholog); FOUND IN nucleoplasm (ortholog) 6 54800381 54851798 - 22301074;30032202 116903491 MODEL JAAIVD010000024;XM_032906069;XM_032906070;XM_032906071;XM_032906072;XM_032906073;XM_032906074;XM_032906076;XM_032906077;XM_032906078;XM_032906079;XM_032906080 XP_032761960;XP_032761961;XP_032761962;XP_032761963;XP_032761964;XP_032761965;XP_032761967;XP_032761968;XP_032761969;XP_032761970;XP_032761971 protein-coding 625885266 Clca2 chloride channel accessory 2 ENCODES a protein that exhibits chloride channel activity (ortholog); ligand-gated monoatomic ion channel activity (ortholog); INVOLVED IN chloride transport (ortholog); ASSOCIATED WITH Lung Neoplasms (ortholog); FOUND IN cell junction (ortholog); plasma membrane (ortholog) 3 15762862 15790836 + 22301074;30032202 116896184 MODEL JAAIVD010000012;XM_032897223 XP_032753114 calcium-activated chloride channel regulator 2 protein-coding 625885283 Nhp2 NHP2 ribonucleoprotein ENCODES a protein that exhibits box H/ACA snoRNA binding (ortholog); mRNA 3'-UTR binding (ortholog); RNA binding (ortholog); INVOLVED IN snoRNA guided rRNA pseudouridine synthesis (ortholog); telomerase RNA localization to Cajal body (ortholog); telomere maintenance via telomerase (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Autosomal Recessive Dyskeratosis Congenita (ortholog); autosomal recessive dyskeratosis congenita 2 (ortholog); dyskeratosis congenita (ortholog); FOUND IN box H/ACA snoRNP complex (ortholog); box H/ACA telomerase RNP complex (ortholog); telomerase holoenzyme complex (ortholog) 9 34208138 34211773 + 22301074;30032202 116910042 MODEL JAAIVD010000002;XM_032913829 XP_032769720 H/ACA ribonucleoprotein complex subunit 2 protein-coding 625885291 LOC116901014 pyrroline-5-carboxylate reductase 3-like 5 123928546 123930028 + 116901014 MODEL JAAIVD010000023 pseudo 625885292 LOC116898427 brain acid soluble protein 1-like 4 90883973 90884837 + 116898427 MODEL JAAIVD010000003 pseudo 625885293 Ttc28 tetratricopeptide repeat domain 28 ENCODES a protein that exhibits kinase binding (ortholog); INVOLVED IN regulation of mitotic cell cycle (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); FOUND IN midbody (ortholog) 16 42686629 43093645 - 22301074 116885273 MODEL JAAIVD010000004;XM_032886506 XP_032742397 tetratricopeptide repeat protein 28 protein-coding 625885319 Gsg1l GSG1 like INVOLVED IN regulation of AMPA receptor activity (ortholog); regulation of postsynaptic neurotransmitter receptor internalization (ortholog); regulation of short-term neuronal synaptic plasticity (ortholog); FOUND IN asymmetric synapse (ortholog); glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog) 2 75851907 76055224 + 30032202 116891533 MODEL JAAIVD010000001;XM_032892685 XP_032748576 germ cell-specific gene 1-like protein protein-coding 625885330 LOC116890400 F-box/WD repeat-containing protein 2-like 1 269310173 269310667 - 116890400 MODEL JAAIVD010000025 pseudo 625885331 Micos13 mitochondrial contact site and cristae organizing system subunit 13 INVOLVED IN cristae formation (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 37 (ortholog); genetic disease (ortholog); FOUND IN MICOS complex (ortholog); mitochondrial crista junction (ortholog); mitochondrial inner membrane (ortholog) 4 87982335 87984423 - 30032202 116899186 MODEL JAAIVD010000003;XM_032900766 XP_032756657 MICOS complex subunit MIC13 protein-coding 625885339 LOC116889189 60S ribosomal protein L27-like X 107889926 107890296 - 116889189 MODEL JAAIVD010000014 pseudo 625885340 LOC116886796 U6 spliceosomal RNA 17 14988553 14988656 + 116886796 MODEL JAAIVD010000011;XR_004386186 snrna 625885343 LOC116902785 60S ribosomal protein L9-like 1 118871800 118873020 + 116902785 MODEL JAAIVD010000025 pseudo 625885344 Hsd17b1 hydroxysteroid 17-beta dehydrogenase 1 ENCODES a protein that exhibits 17-beta-hydroxysteroid dehydrogenase (NADP+) activity (ortholog); estradiol 17-beta-dehydrogenase [NAD(P)+] activity (ortholog); estradiol binding (ortholog); INVOLVED IN adipose tissue development (ortholog); bone development (ortholog); cellular response to metal ion (ortholog); PARTICIPATES IN estradiol biosynthetic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); endometriosis (ortholog); invasive ductal carcinoma (ortholog); FOUND IN cytosol (ortholog) 9 60372151 60374534 + 22301074 116908876 MODEL JAAIVD010000002;XM_032912321 XP_032768212 estradiol 17-beta-dehydrogenase 1 protein-coding 625885353 LOC116893337 myeloid cell surface antigen CD33-like 2 155940909 155951081 + 116893337 MODEL JAAIVD010000001 pseudo 625885354 Slc29a3 solute carrier family 29 member 3 ENCODES a protein that exhibits cytidine transmembrane transporter activity (ortholog); guanine transmembrane transporter activity (ortholog); monoamine transmembrane transporter activity (ortholog); INVOLVED IN adenosine transport (ortholog); cytidine transport (ortholog); dopamine transport (ortholog); ASSOCIATED WITH acanthosis nigricans (ortholog); congenital heart disease (ortholog); Dysosteosclerosis (ortholog); FOUND IN Golgi apparatus (ortholog); late endosome membrane (ortholog); lysosomal membrane (ortholog) 18 26534701 26572612 - 22301074;30032202 116887208 MODEL JAAIVD010000013;XM_032888764 XP_032744655 equilibrative nucleoside transporter 3 protein-coding 625885364 LOC116907474 olfactory receptor 147-like 8 31835399 31836340 + 22301074;30032202 116907474 MODEL JAAIVD010000027;XM_032910460 XP_032766351 protein-coding 625885368 Gpr143 G protein-coupled receptor 143 ENCODES a protein that exhibits dopamine binding (ortholog); G protein-coupled receptor activity (ortholog); L-DOPA binding (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); melanosome localization (ortholog); melanosome organization (ortholog); ASSOCIATED WITH Albinism (ortholog); congenital nystagmus 6 (ortholog); Foveal Hypoplasia (ortholog); FOUND IN apical plasma membrane (ortholog); Golgi apparatus (ortholog); lysosomal membrane (ortholog) X 6184977 6209991 - 22301074;30032202 116888959 MODEL JAAIVD010000014;XM_032890187 XP_032746078 G-protein coupled receptor 143 protein-coding 625885380 LOC116890413 small nucleolar RNA SNORA73 family 1 137235559 137235736 + 116890413 MODEL JAAIVD010000025;XR_004386614 snorna 625885383 Ptprq protein tyrosine phosphatase receptor type Q INVOLVED IN detection of mechanical stimulus involved in sensory perception of sound (ortholog); hematopoietic progenitor cell differentiation (ortholog); inner ear morphogenesis (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH autosomal dominant nonsyndromic deafness 73 (ortholog); autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 84A (ortholog); FOUND IN apical plasma membrane (ortholog); stereocilium base (ortholog); stereocilium bundle (ortholog) 1 185793326 185971582 - 22301074 116890009 MODEL JAAIVD010000025;XM_032890794 XP_032746685 phosphatidylinositol phosphatase PTPRQ protein-coding 625885432 Tmem87b transmembrane protein 87B INVOLVED IN retrograde transport, endosome to Golgi (ortholog) 5 107607367 107640828 + 22301074;30032202 116901948 MODEL JAAIVD010000023;XM_032904181;XM_032904182 XP_032760072;XP_032760073 protein-coding 625885457 Ube4b ubiquitination factor E4B ENCODES a protein that exhibits ATP binding (ortholog); ATPase binding (ortholog); enzyme binding (ortholog); INVOLVED IN granzyme-mediated apoptotic signaling pathway (ortholog); neuron projection development (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Developmental Disease (ortholog); Neurobehavioral Manifestations (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 1 11342505 11443976 + 22301074;30032202 116892644 MODEL JAAIVD010000025;XM_032894467;XM_032894474 XP_032750358;XP_032750365 ubiquitin conjugation factor E4 B protein-coding 625885494 Trnap-agg transfer RNA proline (anticodon AGG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 10 44748127 44748198 + 116911923 MODEL JAAIVD010000005 trna 625885495 LOC116906041 peroxiredoxin-1-like 7 43841112 43863172 + 116906041 MODEL JAAIVD010000026 pseudo 625885496 LOC116893625 protein transport protein Sec61 subunit gamma-like 2 8652562 8653037 + 116893625 MODEL JAAIVD010000001 pseudo 625885497 LOC116884632 28S ribosomal protein S21, mitochondrial-like 15 52238383 52238710 - 116884632 MODEL JAAIVD010000010 pseudo 625885498 Pik3r4 phosphoinositide-3-kinase regulatory subunit 4 INVOLVED IN autophagosome maturation (ortholog); cellular response to glucose starvation (ortholog); early endosome to late endosome transport (ortholog); PARTICIPATES IN autophagy pathway; inositol metabolic pathway; phosphoinositide metabolic pathway; FOUND IN axoneme (ortholog); late endosome (ortholog); phosphatidylinositol 3-kinase complex, class III (ortholog) 8 96924882 96979175 + 22301074;30032202 116907452 MODEL JAAIVD010000027;XM_032910437 XP_032766328 phosphoinositide 3-kinase regulatory subunit 4 protein-coding 625885522 LOC116912294 60 kDa heat shock protein, mitochondrial-like 11 25317304 25319034 - 116912294 MODEL JAAIVD010000006 pseudo 625885523 LOC116893243 actin, cytoplasmic 2-like 2 125808900 125809586 - 116893243 MODEL JAAIVD010000001 pseudo 625885524 Nr2c2ap nuclear receptor 2C2 associated protein FOUND IN nucleoplasm (ortholog) 13 12397849 12399960 + 116914443 MODEL JAAIVD010000008;XM_032918743;XM_032918744 XP_032774634;XP_032774635 nuclear receptor 2C2-associated protein protein-coding 625885538 LOC116912977 small nucleolar RNA SNORA17 11 65710012 65710142 + 116912977 MODEL JAAIVD010000006;XR_004389542 snorna 625885541 Ddx51 DEAD-box helicase 51 ASSOCIATED WITH malignant mesothelioma (ortholog) 16 43687830 43692591 - 22301074;30032202 116885508 MODEL JAAIVD010000004;XM_032886800 XP_032742691 ATP-dependent RNA helicase DDX51 protein-coding 625885560 LOC116888010 interferon alpha-1 1 65514442 65515002 - 22301074;30032202 116888010 MODEL JAAIVD010000025;XM_032889427 XP_032745318 protein-coding 625885563 LOC116890068 cytochrome P450 2D1-like 1 252133928 252136807 - 116890068 MODEL JAAIVD010000025 pseudo 625885564 Ncapd2 non-SMC condensin I complex subunit D2 ENCODES a protein that exhibits histone binding (ortholog); INVOLVED IN mitotic chromosome condensation (ortholog); positive regulation of chromosome condensation (ortholog); positive regulation of chromosome segregation (ortholog); ASSOCIATED WITH genetic disease (ortholog); primary autosomal recessive microcephaly 21 (ortholog); FOUND IN condensed chromosome (ortholog); condensed nuclear chromosome (ortholog); condensin complex (ortholog) 6 22710429 22731332 + 22301074;30032202 116903256 MODEL JAAIVD010000024;XM_032905638 XP_032761529 condensin complex subunit 1 protein-coding 625885599 LOC116897613 small nucleolar RNA SNORA17 3 44827595 44827715 + 116897613 MODEL JAAIVD010000012 pseudo 625885600 Ndufa13 NADH:ubiquinone oxidoreductase subunit A13 INVOLVED IN cellular response to interferon-beta (ortholog); cellular response to retinoic acid (ortholog); extrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH cerebral infarction (ortholog); genetic disease (ortholog); hypertrophic cardiomyopathy (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog) 13 12162087 12169387 - 116914542 MODEL JAAIVD010000008;XM_032918874 XP_032774765 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 protein-coding 625885608 LOC116912215 40S ribosomal protein S12-like 11 89068764 89069484 - 22301074;30032202 116912215 MODEL JAAIVD010000006;XM_032916163 XP_032772054 protein-coding 625885612 Srpk1 SRSF protein kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein serine kinase activity (ortholog); INVOLVED IN chromosome segregation (ortholog); intracellular signal transduction (ortholog); negative regulation of viral genome replication (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 18 5238597 5275243 + 22301074;30032202 116887676 MODEL JAAIVD010000013;XM_032889274 XP_032745165 protein-coding 625885632 LOC116894421 keratin-associated protein 20-2-like 2 158822096 158822263 + 116894421 MODEL JAAIVD010000001;XM_032896126 XP_032752017 protein-coding 625885635 LOC116895032 small nucleolar RNA SNORA17 2 107928039 107928167 + 116895032 MODEL JAAIVD010000001;XR_004387218 snorna 625885638 Slc1a1 solute carrier family 1 member 1 ENCODES a protein that exhibits chloride transmembrane transporter activity (ortholog); cysteine transmembrane transporter activity (ortholog); D-aspartate transmembrane transporter activity (ortholog); INVOLVED IN activation of protein kinase B activity (ortholog); adult behavior (ortholog); behavioral fear response (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH Atrophy (ortholog); autism spectrum disorder (ortholog); brain disease (ortholog); FOUND IN apical dendrite (ortholog); apical part of cell (ortholog); apical plasma membrane (ortholog) 2 28896050 28976447 + 30032202 116891064 MODEL JAAIVD010000001;XM_032891770 XP_032747661 excitatory amino acid transporter 3 protein-coding 625885654 Tmco1 transmembrane and coiled-coil domains 1 ENCODES a protein that exhibits calcium channel activity (ortholog); ribosome binding (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); endoplasmic reticulum calcium ion homeostasis (ortholog); ER overload response (ortholog); ASSOCIATED WITH bone development disease (ortholog); combined T cell and B cell immunodeficiency (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); mitochondrion (ortholog) 10 46624672 46648369 + 22301074;30032202 116911352 MODEL JAAIVD010000005;XM_032915272 XP_032771163 calcium load-activated calcium channel protein-coding 625885665 Snx2 sorting nexin 2 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); identical protein binding (ortholog); insulin receptor binding (ortholog); INVOLVED IN lamellipodium morphogenesis (ortholog); retrograde transport, endosome to Golgi (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); FOUND IN cytoplasm (ortholog); endosome (ortholog); endosome membrane (ortholog) 15 78543925 78585519 - 22301074;30032202 116884432 MODEL JAAIVD010000010;XM_032885520;XM_032885521 XP_032741411;XP_032741412 sorting nexin-2 protein-coding 625885686 Pdk2 pyruvate dehydrogenase kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to nutrient (ortholog); cellular response to reactive oxygen species (ortholog); glucose homeostasis (ortholog); PARTICIPATES IN pyruvate metabolic pathway; ASSOCIATED WITH cardiomyopathy (ortholog); FOUND IN mitochondrion (ortholog); pyruvate dehydrogenase complex (ortholog) 9 59342026 59356903 + 30032202 116909545 MODEL JAAIVD010000002;XM_032913160;XM_032913161 XP_032769051;XP_032769052 pyruvate dehydrogenase kinase, isozyme 2 protein-coding 625885705 Dmrtc2 DMRT like family C2 ENCODES a protein that exhibits identical protein binding (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN heterochromatin organization (ortholog); male meiosis I (ortholog); spermatid nucleus elongation (ortholog); FOUND IN XY body (ortholog) 2 169827036 169834283 - 22301074;30032202 116894482 MODEL JAAIVD010000001;XM_032896193 XP_032752084 doublesex- and mab-3-related transcription factor C2 protein-coding 625885718 Aldh7a1 aldehyde dehydrogenase 7 family member A1 ENCODES a protein that exhibits aldehyde dehydrogenase (NAD+) activity (ortholog); betaine-aldehyde dehydrogenase (NAD+) activity (ortholog); identical protein binding (ortholog); INVOLVED IN alpha-amino acid catabolic process (ortholog); endosome to lysosome transport (ortholog); energy homeostasis (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; choline metabolic pathway; glutaric aciduria type I pathway; ASSOCIATED WITH benign neonatal seizures (ortholog); bone disease (ortholog); coloboma (ortholog); FOUND IN cytosol (ortholog); Golgi membrane (ortholog); mitochondrial matrix (ortholog) 15 75264713 75297436 + 30032202 116884677 MODEL JAAIVD010000010;XM_032885852 XP_032741743 alpha-aminoadipic semialdehyde dehydrogenase protein-coding 625885740 LOC116899023 heterogeneous nuclear ribonucleoprotein A1-like 4 55825190 55826102 - 116899023 MODEL JAAIVD010000003 pseudo 625885741 Helq helicase, POLQ like ENCODES a protein that exhibits single-stranded 3'-5' DNA helicase activity (ortholog); INVOLVED IN DNA double-strand break processing involved in repair via single-strand annealing (ortholog); double-strand break repair via alternative nonhomologous end joining (ortholog); double-strand break repair via homologous recombination (ortholog); FOUND IN nucleus (ortholog); site of DNA damage (ortholog) 11 10979647 11022794 - 22301074 116912146 MODEL JAAIVD010000006;XM_032916061 XP_032771952 helicase POLQ-like protein-coding 625885763 Ncdn neurochondrin INVOLVED IN bone resorption (ortholog); neuron projection development (ortholog); regulation of neuronal synaptic plasticity (ortholog); ASSOCIATED WITH Floating-Harbor syndrome (ortholog); NEURODEVELOPMENTAL DISORDER WITH INFANTILE EPILEPTIC SPASMS (ortholog); schizophrenia (ortholog); FOUND IN axon (ortholog); cytosol (ortholog); dendrite (ortholog) 1 31546673 31556252 + 30032202 116896564 MODEL JAAIVD010000025;XM_032897772;XM_032897780;XM_032897788 XP_032753663;XP_032753671;XP_032753679 protein-coding 625885784 Rala RAS like proto-oncogene A ENCODES a protein that exhibits ATPase binding (ortholog); Edg-2 lysophosphatidic acid receptor binding (ortholog); GDP binding (ortholog); INVOLVED IN membrane raft localization (ortholog); neural tube closure (ortholog); positive regulation of epidermal growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH genetic disease (ortholog); HIATT-NEU-COOPER NEURODEVELOPMENTAL SYNDROME (ortholog); intellectual disability (ortholog); FOUND IN cell surface (ortholog); cleavage furrow (ortholog); endocytic vesicle (ortholog) 14 36445579 36458818 + 22301074;30032202 116883417 MODEL JAAIVD010000009;XM_032884545 XP_032740436 ras-related protein Ral-A protein-coding 625885792 Sephs1 selenophosphate synthetase 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cell redox homeostasis (ortholog); L-selenocysteine biosynthetic process (ortholog); ASSOCIATED WITH Ververi-Brady syndrome 2 (ortholog); FOUND IN cytoplasm (ortholog); nuclear membrane (ortholog); plasma membrane (ortholog) 14 11245560 11271881 + 22301074;30032202 116883304 MODEL JAAIVD010000009;XM_032884351;XM_032884352;XM_032884353 XP_032740242;XP_032740243;XP_032740244 selenide, water dikinase 1 protein-coding 625885812 Mef2a myocyte enhancer factor 2A ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); cellular response to glucose stimulus (ortholog); dendrite morphogenesis (ortholog); ASSOCIATED WITH Coronary Artery Disease, Autosomal Dominant 1 (ortholog); dilated cardiomyopathy (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 132964093 133103696 + 22301074;30032202 116891984 MODEL JAAIVD010000001;XM_032893429;XM_032893430;XM_032893431;XM_032893432;XM_032893434 XP_032749320;XP_032749321;XP_032749322;XP_032749323;XP_032749325 myocyte-specific enhancer factor 2A protein-coding 625885839 Prss54 serine protease 54 17 2395904 2408907 - 22301074;30032202 116886482 MODEL JAAIVD010000011;XM_032887985 XP_032743876 inactive serine protease 54 protein-coding 625885850 Fam217b family with sequence similarity 217 member B FOUND IN nucleoplasm (ortholog) 5 155482282 155490042 + 116902395 MODEL JAAIVD010000023;XM_032904912;XM_032904913;XM_032904915 XP_032760803;XP_032760804;XP_032760806 protein FAM217B protein-coding 625885865 Sesn1 sestrin 1 ENCODES a protein that exhibits L-leucine binding (ortholog); INVOLVED IN cellular oxidant detoxification (ortholog); cellular response to amino acid starvation (ortholog); cellular response to amino acid stimulus (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); GATOR2 complex (ortholog) 18 41477253 41582108 + 22301074;30032202 116886914 MODEL JAAIVD010000013;XM_032888385;XM_032888386 XP_032744276;XP_032744277 sestrin-1 protein-coding 625885882 LOC116889994 glyceraldehyde-3-phosphate dehydrogenase-like 1 176135276 176136252 + 116889994 MODEL JAAIVD010000025 pseudo 625885883 LOC116900884 olfactory receptor 4P4-like 5 69894754 69897105 + 116900884 MODEL JAAIVD010000023 pseudo 625885884 LOC116889950 olfactory receptor 6C75-like 1 161596059 161597026 - 116889950 MODEL JAAIVD010000025 pseudo 625885885 LOC116884846 40S ribosomal protein S9-like 15 40560820 40562906 + 116884846 MODEL JAAIVD010000010 pseudo 625885886 LOC116910198 uncharacterized LOC116910198 9 56767260 56783910 - 116910198 MODEL JAAIVD010000002;XR_004389142 ncrna 625885891 LOC116912936 U7 small nuclear RNA 11 72308157 72308220 + 116912936 MODEL JAAIVD010000006;XR_004389506 snrna 625885894 Pou4f1 POU class 4 homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell migration in hindbrain (ortholog); cellular response to cytokine stimulus (ortholog); cellular response to estradiol stimulus (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); ATAXIA, INTENTION TREMOR, AND HYPOTONIA SYNDROME, CHILDHOOD-ONSET (ortholog); Uterine Cervical Dysplasia (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); neuron projection (ortholog) 12 20340661 20342601 + 22301074;30032202 116913474 MODEL JAAIVD010000007;XM_032917676 XP_032773567 POU domain, class 4, transcription factor 1 protein-coding 625885898 LOC116913939 ferritin light chain 1-like 12 67059141 67059691 - 116913939 MODEL JAAIVD010000007 pseudo 625885899 LOC116910424 40S ribosomal protein S10-like 9 669395 669872 + 116910424 MODEL JAAIVD010000002 pseudo 625885900 LOC116888985 activated RNA polymerase II transcriptional coactivator p15-like 1 112284063 112284664 + 116888985 MODEL JAAIVD010000025 pseudo 625885901 LOC116894599 formyl peptide receptor-related sequence 3-like ENCODES a protein that exhibits complement receptor activity (inferred); G protein-coupled receptor activity (inferred); N-formyl peptide receptor activity (inferred); INVOLVED IN complement receptor mediated signaling pathway (inferred); G protein-coupled receptor signaling pathway (inferred); inflammatory response (inferred); FOUND IN membrane (inferred); plasma membrane (inferred) 2 181701312 181702316 + 28652375;30032202 116894599 A0A220QSC2 MODEL JAAIVD010000001;MF175624;XM_032896316 ASK09534;XP_032752207 Fpr-rs3 protein-coding 625885904 Psma4 proteasome 20S subunit alpha 4 ENCODES a protein that exhibits structural constituent of proteasome (ortholog); INVOLVED IN proteasomal protein catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); regulation of proteasomal protein catabolic process (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 8 49030754 49036832 + 22301074;2249692;30032202 116907023 MODEL JAAIVD010000027;X55986;XM_032909963 CAA39458;XP_032765854 multicatalytic proteinase subunit L;proteasome subunit alpha type-4 protein-coding 625885916 LOC116911137 40S ribosomal protein S3-like 10 30933406 30934150 + 22301074;30032202 116911137 MODEL JAAIVD010000005;XM_032914988 XP_032770879 protein-coding 625885920 LOC116909255 mRNA turnover protein 4 homolog 9 11286849 11287505 + 116909255 MODEL JAAIVD010000002 pseudo 625885921 LOC116902533 small nucleolar RNA SNORA65 5 2667119 2667248 - 116902533 MODEL JAAIVD010000023;XR_004388137 snorna 625885924 Alg12 ALG12 alpha-1,6-mannosyltransferase ENCODES a protein that exhibits dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation Ig (ortholog); genetic disease (ortholog) 1 258127541 258142315 - 30032202 116914834 MODEL JAAIVD010000025;XM_032919292;XM_032919297 XP_032775183;XP_032775188 dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase protein-coding 625885941 Ankmy2 ankyrin repeat and MYND domain containing 2 ENCODES a protein that exhibits enzyme binding (ortholog); ASSOCIATED WITH High Myopia (ortholog) 7 49421683 49470458 + 22301074 116904975 MODEL JAAIVD010000026;XM_032907656 XP_032763547 ankyrin repeat and MYND domain-containing protein 2 protein-coding 625885955 Ceacam1 CEA cell adhesion molecule 1 ENCODES a protein that exhibits actin binding (ortholog); bile acid transmembrane transporter activity (ortholog); calmodulin binding (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); blood vessel development (ortholog); cell adhesion (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); Lung Neoplasms (ortholog); Spontaneous Abortions (ortholog); FOUND IN adherens junction (ortholog); apical plasma membrane (ortholog); basal plasma membrane (ortholog) 2 169244617 169261331 + 30032202 116892459 MODEL JAAIVD010000001;XM_032894175 XP_032750066 carcinoembryonic antigen-related cell adhesion molecule 1 protein-coding 625885968 Dclk2 doublecortin like kinase 2 ENCODES a protein that exhibits microtubule binding (ortholog); protein kinase activity (ortholog); INVOLVED IN hippocampus development (ortholog); microtubule cytoskeleton organization (ortholog); negative regulation of protein localization to nucleus (ortholog) 3 66657205 66786050 + 22301074 116896723 MODEL JAAIVD010000012;XM_032898142;XM_032898143;XM_032898144;XM_032898145 XP_032754033;XP_032754034;XP_032754035;XP_032754036 serine/threonine-protein kinase DCLK2 protein-coding 625885993 Ubap2l ubiquitin associated protein 2 like INVOLVED IN binding of sperm to zona pellucida (ortholog); hematopoietic stem cell homeostasis (ortholog); positive regulation of stress granule assembly (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); NEURODEVELOPMENTAL DISORDER WITH IMPAIRED LANGUAGE, BEHAVIORAL ABNORMALITIES, AND DYSMORPHIC FACIES (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN PcG protein complex (ortholog) 3 63591287 63646506 + 22301074;30032202 116896625 MODEL JAAIVD010000012;XM_032897901;XM_032897902;XM_032897903;XM_032897904;XM_032897905;XM_032897906;XM_032897907;XM_032897908;XM_032897909;XM_032897910;XM_032897911;XM_032897914;XM_032897915;XM_032897916;XM_032897917;XM_032897918;XM_032897919;XM_032897920;XM_032897921;XM_032897922;XM_032897923;XM_032897924;XM_032897925;XM_032897926;XM_032897927;XM_032897928;XM_032897930;XM_032897931;XM_032897932;XM_032897933;XM_032897934 XP_032753792;XP_032753793;XP_032753794;XP_032753795;XP_032753796;XP_032753797;XP_032753798;XP_032753799;XP_032753800;XP_032753801;XP_032753802;XP_032753805;XP_032753806;XP_032753807;XP_032753808;XP_032753809;XP_032753810;XP_032753811;XP_032753812;XP_032753813;XP_032753814;XP_032753815;XP_032753816;XP_032753817;XP_032753818;XP_032753819;XP_032753821;XP_032753822;XP_032753823;XP_032753824;XP_032753825 ubiquitin-associated protein 2-like protein-coding 625886071 LOC116914465 uncharacterized LOC116914465 13 13828203 13831771 - 116914465 MODEL JAAIVD010000008;XR_004389748 ncrna 625886076 Tinagl1 tubulointerstitial nephritis antigen like 1 ENCODES a protein that exhibits cysteine-type peptidase activity (ortholog); laminin binding (ortholog); INVOLVED IN proteolysis (ortholog); FOUND IN cytoplasm (ortholog) 1 27972495 27982481 + 22301074;30032202 116895977 MODEL JAAIVD010000025;XM_032897017 XP_032752908 tubulointerstitial nephritis antigen-like protein-coding 625886092 Ndufab1 NADH:ubiquinone oxidoreductase subunit AB1 ENCODES a protein that exhibits mitochondrial large ribosomal subunit binding (ortholog); structural molecule activity (ortholog); INVOLVED IN [2Fe-2S] cluster assembly (ortholog); mitochondrial large ribosomal subunit assembly (ortholog); protein lipoylation (ortholog); FOUND IN mitochondrial [2Fe-2S] assembly complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 2 79728910 79738956 + 22301074;30032202 116891561 MODEL JAAIVD010000001;XM_032892741 XP_032748632 acyl carrier protein, mitochondrial protein-coding 625886101 LOC116900543 olfactory receptor 4K3-like 5 89702063 89702998 - 22301074 116900543 MODEL JAAIVD010000023;XM_032902271 XP_032758162 protein-coding 625886104 LOC116910707 small nucleolar RNA SNORA17 9 13603159 13603290 - 116910707 MODEL JAAIVD010000002;XR_004389234 snorna 625886107 LOC116914144 small nucleolar RNA SNORA17 12 23995665 23995795 + 116914144 MODEL JAAIVD010000007;XR_004389701 snorna 625886110 Hsf4 heat shock transcription factor 4 ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); protein phosphatase binding (ortholog); INVOLVED IN camera-type eye development (ortholog); cell development (ortholog); eye development (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 5 multiple types (ortholog); genetic disease (ortholog); FOUND IN chromatin (ortholog); nuclear speck (ortholog) 17 24996938 25002777 + 22301074 116886367 MODEL JAAIVD010000011;XM_032887828;XM_032887829;XM_032887830 XP_032743719;XP_032743720;XP_032743721 heat shock factor protein 4 protein-coding 625886134 Gfpt1 glutamine--fructose-6-phosphate transaminase 1 ENCODES a protein that exhibits amino acid binding (ortholog); carbohydrate binding (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); circadian regulation of gene expression (ortholog); fructose 6-phosphate metabolic process (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; amino sugar metabolic pathway; french type sialuria pathway; ASSOCIATED WITH congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 12 (ortholog); congenital myasthenic syndrome 4C (ortholog) 6 59220396 59266164 - 22301074;30032202 116903541 MODEL JAAIVD010000024;XM_032906155 XP_032762046 glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 protein-coding 625886157 LOC116901053 ferritin light chain 1-like 5 135753075 135753678 + 116901053 MODEL JAAIVD010000023 pseudo 625886158 LOC116902956 vomeronasal type-1 receptor 101-like 6 124269411 124271749 - 22301074;30032202 116902956 MODEL JAAIVD010000024;XM_032905282 XP_032761173 protein-coding 625886162 Smpd2 sphingomyelin phosphodiesterase 2 ENCODES a protein that exhibits phosphoric diester hydrolase activity (ortholog); sphingomyelin phosphodiesterase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); ceramide metabolic process (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN tumor necrosis factor mediated signaling pathway; FOUND IN caveola (ortholog); plasma membrane (ortholog) 18 41180020 41183272 - 30032202 116886946 MODEL JAAIVD010000013;XM_032888445 XP_032744336 protein-coding 625886176 Vps25 vacuolar protein sorting 25 homolog ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN negative regulation of epidermal growth factor-activated receptor activity (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endosome membrane (ortholog) 9 60558374 60563744 + 22301074;30032202 116909560 MODEL JAAIVD010000002;XM_032913178 XP_032769069 vacuolar protein-sorting-associated protein 25 protein-coding 625886186 LOC116900010 histo-blood group ABO system transferase 2-like 5 9939893 9944201 - 116900010 MODEL JAAIVD010000023;XR_004387909 pseudo 625886191 Nfs1 NFS1 cysteine desulfurase ENCODES a protein that exhibits cysteine desulfurase activity (ortholog); protein homodimerization activity (ortholog); sulfur carrier activity (ortholog); INVOLVED IN [2Fe-2S] cluster assembly (ortholog); [4Fe-4S] cluster assembly (ortholog); iron-sulfur cluster assembly (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; ASSOCIATED WITH combined oxidative phosphorylation deficiency 52 (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); mitochondrial [2Fe-2S] assembly complex (ortholog) 5 135482204 135503354 - 22301074;30032202 116902198 MODEL JAAIVD010000023;XM_032904564 XP_032760455 cysteine desulfurase, mitochondrial protein-coding 625886208 Lrrc30 leucine rich repeat containing 30 4 177287208 177288352 - 22301074 116898290 MODEL JAAIVD010000003;XM_032899642 XP_032755533 leucine-rich repeat-containing protein 30 protein-coding 625886212 LOC116914320 nuclear receptor corepressor 1-like 13 44203157 44227034 + 116914320 MODEL JAAIVD010000008 pseudo 625886213 Syndig1l synapse differentiation inducing 1 like FOUND IN Golgi apparatus (ortholog) 7 98784625 98806869 - 22301074;30032202 116905276 MODEL JAAIVD010000026;XM_032908136 XP_032764027 synapse differentiation-inducing gene protein 1-like protein-coding 625886221 LOC116893435 glyceraldehyde-3-phosphate dehydrogenase-like 2 175982042 175983103 + 116893435 MODEL JAAIVD010000001 pseudo 625886222 LOC116899834 small nucleolar RNA SNORA48 4 147185192 147185328 - 116899834 MODEL JAAIVD010000003 pseudo 625886223 Klf1 KLF transcription factor 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cellular response to endothelin (ortholog); chromatin remodeling (ortholog); embryonic hemopoiesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); beta thalassemia (ortholog); chromosome 5q deletion syndrome (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 17 15384052 15387205 - 30032202 116886259 MODEL JAAIVD010000011;XM_032887679;XM_032887681 XP_032743570;XP_032743572 Krueppel-like factor 1;Kruppel like factor 1 protein-coding 625886233 Ptprs protein tyrosine phosphatase receptor type S ENCODES a protein that exhibits chondroitin sulfate binding (ortholog); heparin binding (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN cerebellum development (ortholog); cerebral cortex development (ortholog); corpus callosum development (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Hearing Loss (ortholog); NATURAL KILLER CELL ENTEROPATHY (ortholog); FOUND IN glutamatergic synapse (ortholog); plasma membrane (ortholog); postsynaptic density membrane (ortholog) 4 87802902 87863350 - 22301074 116899182 MODEL JAAIVD010000003;XM_032900756 XP_032756647 receptor-type tyrosine-protein phosphatase S protein-coding 625886272 Vkorc1l1 vitamin K epoxide reductase complex subunit 1L1 ENCODES a protein that exhibits vitamin-K-epoxide reductase (warfarin-sensitive) activity (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); peptidyl-glutamic acid carboxylation (ortholog); vitamin K metabolic process (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 16 24030087 24078584 - 22301074;30032202 116885145 MODEL JAAIVD010000004;XM_032886335;XM_032886336 XP_032742226;XP_032742227 vitamin K epoxide reductase complex subunit 1 like 1;vitamin K epoxide reductase complex subunit 1-like protein 1 protein-coding 625886283 Pde12 phosphodiesterase 12 ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); exonuclease activity (ortholog); poly(A)-specific ribonuclease activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to dsRNA (ortholog); cellular response to interferon-alpha (ortholog); ASSOCIATED WITH Cardiovirus Infections (ortholog); respiratory syncytial virus infectious disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 13 2464531 2470730 - 30032202 116914455 MODEL JAAIVD010000008;XM_032918757 XP_032774648 2',5'-phosphodiesterase 12 protein-coding 625886290 Prkcz protein kinase C zeta ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); calcium,diacylglycerol-dependent serine/threonine kinase activity (ortholog); insulin receptor substrate binding (ortholog); INVOLVED IN activation of protein kinase B activity (ortholog); cell migration (ortholog); cell surface receptor signaling pathway (ortholog); PARTICIPATES IN adenosine signaling pathway; angiotensin II signaling pathway; ceramide signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Cardiomegaly (ortholog); Hyperalgesia (ortholog); FOUND IN apical cortex (ortholog); apical plasma membrane (ortholog); axon hillock (ortholog) 1 5350189 5461946 + 22301074 116891983 MODEL JAAIVD010000025;XM_032893433 XP_032749324 protein kinase C zeta type protein-coding 625886312 Arfgef3 ARFGEF family member 3 ASSOCIATED WITH dystonia (ortholog); Febrile Seizures (ortholog); Neurodevelopmental Disorders (ortholog) 2 218153126 218308652 + 22301074 116892987 MODEL JAAIVD010000001;XM_032894946 XP_032750837 brefeldin A-inhibited guanine nucleotide-exchange protein 3 protein-coding 625886350 Tmt1a thiol methyltransferase 1A ENCODES a protein that exhibits mRNA m(6)A methyltransferase activity (ortholog); RNA methyltransferase activity (ortholog); thiol S-methyltransferase activity (ortholog); INVOLVED IN lncRNA processing (ortholog); odontogenesis (ortholog); osteoblast differentiation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); endometriosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); lipid droplet (ortholog) 1 262748233 262757146 - 22301074 116884051 MODEL JAAIVD010000025;XM_032885300 XP_032741191 Mettl7a methyltransferase like 7A;methyltransferase-like protein 7A protein-coding 625886356 En1 engrailed homeobox 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); cerebellum development (ortholog); dorsal/ventral pattern formation (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); ENDOVE SYNDROME, LIMB-BRAIN TYPE (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 10 13196538 13201510 + 22301074;30032202 116911212 MODEL JAAIVD010000005;XM_032915089 XP_032770980 homeobox protein engrailed-1 protein-coding 625886361 Gip gastric inhibitory polypeptide ENCODES a protein that exhibits gastric inhibitory polypeptide receptor binding (ortholog); receptor ligand activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adult locomotory behavior (ortholog); digestive system development (ortholog); ASSOCIATED WITH Anorexia (ortholog); autonomic nervous system disease (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN extracellular region (ortholog); neuronal cell body (ortholog) 9 58367309 58375332 - 22301074;30032202 116910072 MODEL JAAIVD010000002;XM_032913887 XP_032769778 protein-coding 625886371 LOC116893233 60S ribosomal protein L35a-like 2 119900257 119901045 + 116893233 MODEL JAAIVD010000001 pseudo 625886372 Timm10b translocase of inner mitochondrial membrane 10B INVOLVED IN protein insertion into mitochondrial inner membrane (ortholog); PARTICIPATES IN carrier pathway of mitochondrial protein import; FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrial intermembrane space chaperone complex (ortholog) 2 104477644 104480529 + 30032202 116891822 MODEL JAAIVD010000001;XM_032893186;XM_032893187 XP_032749077;XP_032749078 mitochondrial import inner membrane translocase subunit Tim10 B protein-coding 625886383 Stam signal transducing adaptor molecule ENCODES a protein that exhibits ubiquitin-like protein ligase binding (ortholog); INVOLVED IN positive regulation of exosomal secretion (ortholog); regulation of extracellular exosome assembly (ortholog); PARTICIPATES IN interleukin-2 signaling pathway; FOUND IN ESCRT-0 complex (ortholog) 14 9477867 9524083 - 22301074;30032202 116883272 MODEL JAAIVD010000009;XM_032884261 XP_032740152 signal transducing adapter molecule 1 protein-coding 625886401 LOC116891841 lysosomal Pro-X carboxypeptidase 2 108271813 108320384 - 22301074;30032202 116891841 MODEL JAAIVD010000001;XM_032893208 XP_032749099 protein-coding 625886414 LOC116899434 aldehyde oxidase 1 4 134286580 134343483 - 22301074;30032202 116899434 MODEL JAAIVD010000003;XM_032901188 XP_032757079 protein-coding 625886451 Tmem41a transmembrane protein 41A 4 6618821 6625391 - 116898713 MODEL JAAIVD010000003;XM_032900003 XP_032755894 protein-coding 625886460 LOC116890477 small nucleolar RNA SNORA19 1 201536854 201536979 + 116890477 MODEL JAAIVD010000025;XR_004386666 snorna 625886463 Plekha6 pleckstrin homology domain containing A6 10 2539189 2637439 - 116911139 MODEL JAAIVD010000005;XM_032914991 XP_032770882 pleckstrin homology domain-containing family A member 6 protein-coding 625886494 Msra methionine sulfoxide reductase A ENCODES a protein that exhibits peptide-methionine (S)-S-oxide reductase activity (ortholog); ASSOCIATED WITH autistic disorder (ortholog); schizophrenia (ortholog); substance-related disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial matrix (ortholog) 12 59969337 60292275 + 22301074;30032202 116913360 MODEL JAAIVD010000007;XM_032917517;XM_032917518;XM_032917519;XM_032917520;XM_032917521;XR_004389611 XP_032773408;XP_032773409;XP_032773410;XP_032773411;XP_032773412 mitochondrial peptide methionine sulfoxide reductase protein-coding 625886519 Hdac4 histone deacetylase 4 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); cellular response to parathyroid hormone stimulus (ortholog); cellular response to tumor necrosis factor (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; histone modification pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); aortic aneurysm (ortholog); FOUND IN A band (ortholog); actomyosin (ortholog); chromatin (ortholog) 4 163903978 164152092 - 22301074;30032202 116899644 MODEL JAAIVD010000003;XM_032901646;XM_032901647;XM_032901649;XM_032901650;XM_032901651;XM_032901652;XM_032901653 XP_032757537;XP_032757538;XP_032757540;XP_032757541;XP_032757542;XP_032757543;XP_032757544 protein-coding 625886564 LOC116887955 prohibitin-like X 64546362 64547190 + 116887955 MODEL JAAIVD010000014 pseudo 625886565 Snapin SNAP associated protein ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); SNARE binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); autophagosome maturation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN acrosomal vesicle (ortholog); BLOC-1 complex (ortholog); BORC complex (ortholog) 3 63128171 63129987 + 22301074;30032202 116896605 MODEL JAAIVD010000012;XM_032897856 XP_032753747 SNARE-associated protein Snapin protein-coding 625886573 LOC116884489 phospholipid phosphatase 2-like 15 22269140 22270404 - 30032202 116884489 MODEL JAAIVD010000010;XM_032885610 XP_032741501 protein-coding 625886578 LOC116904342 oral-facial-digital syndrome 1 protein homolog 6 70980034 70982925 + 116904342 MODEL JAAIVD010000024 pseudo 625886579 Mgarp mitochondria localized glutamic acid rich protein INVOLVED IN anterograde axonal transport (ortholog); axon development (ortholog); axonal transport of mitochondrion (ortholog); ASSOCIATED WITH rheumatoid arthritis (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 3 103060054 103068086 + 30032202 116895493 MODEL JAAIVD010000012;XM_032896750 XP_032752641 protein MGARP protein-coding 625886587 LOC116886772 5S ribosomal RNA 17 43139857 43139975 - 116886772 MODEL JAAIVD010000011;XR_004386169 rrna 625886590 LOC116903081 tubulin alpha-3 chain 6 3360666 3366226 + 22301074;30032202 116903081 MODEL JAAIVD010000024;XM_032905401;XM_032905402 XP_032761292;XP_032761293 protein-coding 625886602 Eef2k eukaryotic elongation factor 2 kinase ENCODES a protein that exhibits calmodulin binding (ortholog); elongation factor-2 kinase activity (ortholog); INVOLVED IN cellular response to anoxia (ortholog); cellular response to brain-derived neurotrophic factor stimulus (ortholog); cellular response to calcium ion (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); lung adenocarcinoma (ortholog); FOUND IN dendritic spine (ortholog); glutamatergic synapse (ortholog); postsynaptic density (ortholog) 2 80892038 80952600 - 22301074 116891577 MODEL JAAIVD010000001;XM_032892758 XP_032748649 protein-coding 625886624 LOC116887285 H-2 class II histocompatibility antigen, E-U alpha chain ENCODES a protein that exhibits peptide antigen binding (ortholog); polysaccharide binding (ortholog); T cell receptor binding (ortholog); INVOLVED IN antigen processing and presentation of endogenous peptide antigen via MHC class II (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); antigen processing and presentation of peptide or polysaccharide antigen via MHC class II (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH allergic disease (ortholog); asthma (ortholog); Asthma and Nasal Polyps (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); immunological synapse (ortholog) 18 7045134 7049182 - 22301074;30032202 116887285 MODEL JAAIVD010000013;XM_032888865 XP_032744756 protein-coding 625886632 LOC116894870 U6 spliceosomal RNA 2 38919025 38919129 + 116894870 MODEL JAAIVD010000001;XR_004387083 snrna 625886635 Tp53inp2 tumor protein p53 inducible nuclear protein 2 INVOLVED IN autophagosome assembly (ortholog); positive regulation of DNA-templated transcription (ortholog); FOUND IN autophagosome (ortholog); cytosol (ortholog); nucleus (ortholog) 5 134729249 134737123 + 30032202 116902176 MODEL JAAIVD010000023;XM_032904525;XM_032904526;XM_032904527;XM_032904528;XM_032904529 XP_032760416;XP_032760417;XP_032760418;XP_032760419;XP_032760420 tumor protein p53-inducible nuclear protein 2 protein-coding 625886656 Eef1a2 eukaryotic translation elongation factor 1 alpha 2 ENCODES a protein that exhibits protein kinase binding (ortholog); translation elongation factor activity (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); positive regulation of lipid kinase activity (ortholog); regulation of postsynaptic specialization assembly (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); autistic disorder (ortholog); autosomal dominant intellectual developmental disorder 38 (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); eukaryotic translation elongation factor 1 complex (ortholog) 5 158252991 158262270 - 22301074;30032202 116902430 MODEL JAAIVD010000023;XM_032904965 XP_032760856 elongation factor 1-alpha 2 protein-coding 625886668 LOC116888521 ribonucleoside-diphosphate reductase subunit M2-like X 106265251 106266632 - 22301074;30032202 116888521 MODEL JAAIVD010000014;XM_032889820 XP_032745711 protein-coding 625886673 LOC116905607 cyclin-F-like 7 28386099 28388569 + 116905607 MODEL JAAIVD010000026 pseudo 625886674 Slc37a3 solute carrier family 37 member 3 ENCODES a protein that exhibits glucose 6-phosphate:phosphate antiporter activity (ortholog); xenobiotic transmembrane transporter activity (ortholog); INVOLVED IN glucose-6-phosphate transport (ortholog); phosphate ion transmembrane transport (ortholog); xenobiotic transmembrane transport (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); lysosomal membrane (ortholog) 6 100414799 100454849 + 22301074;30032202 116903933 MODEL JAAIVD010000024;XM_032906707;XM_032906708;XM_032906709;XM_032906710;XM_032906711 XP_032762598;XP_032762599;XP_032762600;XP_032762601;XP_032762602 sugar phosphate exchanger 3 protein-coding 625886704 Apoc3 apolipoprotein C3 ENCODES a protein that exhibits high-density lipoprotein particle receptor binding (ortholog); lipase inhibitor activity (ortholog); phospholipid binding (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cholesterol efflux (ortholog); cholesterol homeostasis (ortholog); PARTICIPATES IN altered lipoprotein metabolic pathway; lipoprotein metabolic pathway; ASSOCIATED WITH apolipoprotein C-III deficiency (ortholog); breast cancer (ortholog); cardiovascular system disease (ortholog); FOUND IN chylomicron (ortholog); extracellular region (ortholog); intermediate-density lipoprotein particle (ortholog) 8 40753291 40756012 - 22301074;30032202 116906755 MODEL JAAIVD010000027;XM_032909581;XM_032909582;XM_032909583;XM_032909584 XP_032765472;XP_032765473;XP_032765474;XP_032765475 apolipoprotein C-III protein-coding 625886720 LOC116895106 U2 spliceosomal RNA 2 8095419 8095553 - 116895106 MODEL JAAIVD010000001 pseudo 625886721 LOC116899701 protein THEMIS3-like 4 176227928 176265014 - 30032202 116899701 MODEL JAAIVD010000003;XM_032901725 XP_032757616 protein-coding 625886729 LOC116910773 U6 spliceosomal RNA 9 42058476 42058581 + 116910773 MODEL JAAIVD010000002;XR_004389281 snrna 625886732 LOC116884117 U6 spliceosomal RNA 14 62435223 62435328 - 116884117 MODEL JAAIVD010000009;XR_004385848 snrna 625886735 LOC116895425 uncharacterized LOC116895425 3 64390188 64391492 + 116895425 MODEL JAAIVD010000012;XR_004387274 ncrna 625886740 LOC116890958 TD and POZ domain-containing protein 5-like 2 10025771 10028009 + 116890958 MODEL JAAIVD010000001 pseudo 625886741 Tfcp2l1 transcription factor CP2 like 1 ENCODES a protein that exhibits RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell morphogenesis (ortholog); cytoplasm organization (ortholog); determination of adult lifespan (ortholog); ASSOCIATED WITH chronic kidney disease (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); nucleus (ortholog) 10 11214499 11267009 + 22301074;30032202 116911350 MODEL JAAIVD010000005;XM_032915270 XP_032771161 transcription factor CP2-like protein 1 protein-coding 625886760 LOC116910368 developmental pluripotency-associated protein 2-like 9 79635751 79636414 + 116910368 MODEL JAAIVD010000002 pseudo 625886761 LOC116915146 small nucleolar RNA SNORD19 13 6716555 6716631 - 116915146 MODEL JAAIVD010000008;XR_004389816 snorna 625886764 Eif4h eukaryotic translation initiation factor 4H INVOLVED IN developmental growth (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH Williams-Beuren syndrome (ortholog) 16 19423866 19440328 + 22301074 116885282 MODEL JAAIVD010000004;XM_032886527;XM_032886528 XP_032742418;XP_032742419 protein-coding 625886778 LOC116890361 U6 spliceosomal RNA 1 248055613 248055719 + 116890361 MODEL JAAIVD010000025;XR_004386579 snrna 625886781 Rasd2 RASD family member 2 ENCODES a protein that exhibits G-protein beta-subunit binding (ortholog); GTP binding (ortholog); phosphatidylinositol 3-kinase binding (ortholog); INVOLVED IN locomotory behavior (ortholog); negative regulation of protein ubiquitination (ortholog); positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); FOUND IN plasma membrane (ortholog) 17 4598669 4609460 + 22301074 116886378 MODEL JAAIVD010000011;XM_032887845 XP_032743736 GTP-binding protein Rhes protein-coding 625886788 Klf5 KLF transcription factor 5 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to endothelin (ortholog); cellular response to leukemia inhibitory factor (ortholog); ASSOCIATED WITH adenoma (ortholog); Cardiomegaly (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) 12 25189489 25204823 - 30032202 116913416 MODEL JAAIVD010000007;XM_032917601 XP_032773492 Krueppel-like factor 5;Kruppel like factor 5 protein-coding 625886796 Zkscan2 zinc finger with KRAB and SCAN domains 2 2 78367070 78386343 + 30032202 116891543 MODEL JAAIVD010000001;XM_032892700 XP_032748591 zinc finger protein with KRAB and SCAN domains 2 protein-coding 625886807 Sec23a SEC23 homolog A, COPII component ENCODES a protein that exhibits zinc ion binding (ortholog); INVOLVED IN COPII-coated vesicle cargo loading (ortholog); protein localization to plasma membrane (ortholog); ASSOCIATED WITH craniolenticulosutural dysplasia (ortholog); osteoarthritis (ortholog); FOUND IN COPII vesicle coat (ortholog); COPII-coated ER to Golgi transport vesicle (ortholog); cytosol (ortholog) 7 72264570 72309545 - 22301074;30032202 116905078 MODEL JAAIVD010000026;XM_032907786 XP_032763677 SEC23 homolog A, COPII coat complex component;protein transport protein Sec23A protein-coding 625886831 LOC116914953 ral guanine nucleotide dissociation stimulator-like 13 11856921 11863564 + 116914953 MODEL JAAIVD010000008 pseudo 625886832 Phb1 prohibitin 1 ENCODES a protein that exhibits complement component C3a binding (ortholog); complement component C3b binding (ortholog); enzyme binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); antiviral innate immune response (ortholog); B cell activation (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); Animal Mammary Neoplasms (ortholog); Brain Injuries (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); early endosome (ortholog) 9 58714369 58727259 - 22301074;30032202 116909152 MODEL JAAIVD010000002;XM_032912637 XP_032768528 Phb prohibitin protein-coding 625886843 LOC116909521 olfactory receptor 1493 9 44530074 44531012 + 22301074;30032202 116909521 MODEL JAAIVD010000002;XM_032913129 XP_032769020 protein-coding 625886846 Arhgef33 Rho guanine nucleotide exchange factor 33 7 12678257 12734731 - 22301074 116905850 MODEL JAAIVD010000026;XM_032908824;XM_032908825;XM_032908826;XM_032908827;XM_032908828 XP_032764715;XP_032764716;XP_032764717;XP_032764718;XP_032764719 protein-coding 625886876 Fbxl6 F-box and leucine rich repeat protein 6 1 248871533 248874482 - 22301074;30032202 116913249 MODEL JAAIVD010000025;XM_032917407 XP_032773298 F-box/LRR-repeat protein 6 protein-coding 625886889 LOC116887704 saoe class I histocompatibility antigen, A alpha chain-like 18 9660820 9663007 + 30032202 116887704 MODEL JAAIVD010000013;XM_032889302 XP_032745193 protein-coding 625886896 LOC116888947 forkhead box protein N3-like X 3240298 3245349 - 116888947 MODEL JAAIVD010000014 pseudo 625886897 LOC116900196 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7-like 5 50161131 50161448 + 22301074;30032202 116900196 MODEL JAAIVD010000023;XM_032901955 XP_032757846 protein-coding 625886900 LOC116900560 glyceraldehyde-3-phosphate dehydrogenase-like 5 90038361 90039418 - 22301074;30032202 116900560 MODEL JAAIVD010000023;XM_032902285 XP_032758176 protein-coding 625886905 Stard7 StAR related lipid transfer domain containing 7 ENCODES a protein that exhibits molecular carrier activity (ortholog); phosphatidylcholine transfer activity (ortholog); INVOLVED IN establishment of skin barrier (ortholog); inflammatory response (ortholog); intermembrane phospholipid transfer (ortholog); ASSOCIATED WITH familial adult myoclonic epilepsy 2 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial intermembrane space (ortholog) 5 106048686 106077688 + 22301074 116901931 MODEL JAAIVD010000023;XM_032904154 XP_032760045 stAR-related lipid transfer protein 7, mitochondrial protein-coding 625886917 Adamts20 ADAM metallopeptidase with thrombospondin type 1 motif 20 ENCODES a protein that exhibits endopeptidase activity (ortholog); metalloendopeptidase activity (ortholog); INVOLVED IN extracellular matrix organization (ortholog); negative regulation of apoptotic process (ortholog); positive regulation of melanocyte differentiation (ortholog); ASSOCIATED WITH cleft lip (ortholog); melanoma (ortholog); FOUND IN extracellular region (ortholog) 1 267146254 267272968 - 22301074;30032202 116884306 MODEL JAAIVD010000025;XM_032885418 XP_032741309 A disintegrin and metalloproteinase with thrombospondin motifs 20 protein-coding 625886960 Nav3 neuron navigator 3 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN microtubule cytoskeleton organization (ortholog); negative regulation of cell migration (ortholog); negative regulation of interleukin-2 production (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Cardiac Arrhythmias (ortholog); Neurodevelopmental disorder with poor or absent speech, dysmorphic facies, and behavioral abnormalities (ortholog); FOUND IN microtubule (ortholog); microtubule end (ortholog); nuclear envelope (ortholog) 1 187871442 188400352 - 22301074;30032202 116908829 MODEL JAAIVD010000025;XM_032912252 XP_032768143 protein-coding 625887002 LOC116883287 ubiquitin-40S ribosomal protein S27a-like 14 78242248 78242617 + 116883287 MODEL JAAIVD010000009 pseudo 625887003 Pdpn podoplanin ENCODES a protein that exhibits amino acid transmembrane transporter activity (ortholog); chemokine binding (ortholog); folic acid transmembrane transporter activity (ortholog); INVOLVED IN actin-mediated cell contraction (ortholog); amino acid transport (ortholog); cell adhesion (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Albuminuria (ortholog); bacterial pneumonia (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cell junction (ortholog) 1 14860905 14893811 + 30032202 116893098 MODEL JAAIVD010000025;XM_032895043;XM_032895047;XM_032895052;XM_032895058 XP_032750934;XP_032750938;XP_032750943;XP_032750949 protein-coding 625887019 LOC116904580 40S ribosomal protein S7-like 6 20907737 20908398 + 22301074;30032202 116904580 MODEL JAAIVD010000024;XM_032907377 XP_032763268 protein-coding 625887024 LOC116903560 probable N-acetyltransferase CML6 6 60386653 60390365 + 30032202 116903560 MODEL JAAIVD010000024;XM_032906177;XM_032906178 XP_032762068;XP_032762069 protein-coding 625887033 LOC116890625 U2 spliceosomal RNA 1 48923028 48923218 - 116890625 MODEL JAAIVD010000025;XR_004386770 snrna 625887036 LOC116895867 RNA exonuclease 1 homolog 3 99768334 99770193 + 22301074;30032202 116895867 MODEL JAAIVD010000012;XM_032896968 XP_032752859 protein-coding 625887039 Fancd2 FA complementation group D2 ENCODES a protein that exhibits DNA polymerase binding (ortholog); INVOLVED IN brain morphogenesis (ortholog); cellular response to oxidative stress (ortholog); DNA damage response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Fanconi anemia (ortholog); FOUND IN condensed chromosome (ortholog); nuclear body (ortholog); nucleolus (ortholog) 6 32940815 33004434 - 30032202 116903405 MODEL JAAIVD010000024;XM_032905918 XP_032761809 Fanconi anemia group D2 protein protein-coding 625887087 Nr1i3 nuclear receptor subfamily 1 group I member 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); nuclear receptor activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); osteoblast differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); diabetes mellitus (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 10 50377952 50383473 + 22301074;30032202 116911184 MODEL JAAIVD010000005;XM_032915052;XM_032915053 XP_032770943;XP_032770944 protein-coding 625887102 LOC116904816 U6 spliceosomal RNA 6 100522157 100522263 + 116904816 MODEL JAAIVD010000024;XR_004388467 snrna 625887105 Ap3b1 adaptor related protein complex 3 subunit beta 1 ENCODES a protein that exhibits GTP-dependent protein binding (ortholog); protein phosphatase binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); antigen processing and presentation (ortholog); ASSOCIATED WITH Chediak-Higashi syndrome (ortholog); cyclic hematopoiesis (ortholog); genetic disease (ortholog); FOUND IN microvesicle (ortholog) 3 201782994 201982976 - 22301074;30032202 116897285 MODEL JAAIVD010000012;XM_032899017 XP_032754908 AP-3 complex subunit beta-1 protein-coding 625887136 Mon1b MON1 vesicular trafficking associated B INVOLVED IN early viral transcription (ortholog); late viral transcription (ortholog); FOUND IN cytoplasm (ortholog); late endosome (ortholog); Mon1-Ccz1 complex (ortholog) 17 33298733 33306551 + 22301074;30032202 116886245 MODEL JAAIVD010000011;XM_032887657 XP_032743548 MON1 homolog B, secretory trafficking associated;vacuolar fusion protein MON1 homolog B protein-coding 625887146 Ostn osteocrin ENCODES a protein that exhibits hormone activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN bone growth (ortholog); cell surface receptor signaling pathway (ortholog); endochondral bone growth (ortholog); FOUND IN extracellular region (ortholog) 4 12936976 12972636 - 30032202 116897837 MODEL JAAIVD010000003;XM_032899253;XM_032899254 XP_032755144;XP_032755145 protein-coding 625887160 Cfp complement factor properdin INVOLVED IN complement activation, alternative pathway (ortholog); positive regulation of complement activation, alternative pathway (ortholog); protein stabilization (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); factor VIII deficiency (ortholog); genetic disease (ortholog); FOUND IN cytoplasmic side of Golgi membrane (ortholog); extracellular region (ortholog); secretory granule (ortholog) X 2827219 2834867 - 116889401 MODEL JAAIVD010000014;XM_032890508 XP_032746399 properdin protein-coding 625887173 Ube2d4 ubiquitin conjugating enzyme E2 D4 (putative) ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to arsenite(3-) (ortholog); cellular response to cadmium ion (ortholog); protein K11-linked ubiquitination (ortholog); PARTICIPATES IN altered ubiquitin/proteasome degradation pathway; Alzheimer's disease pathway; ubiquitin/proteasome degradation pathway 11 74721247 74742412 + 30032202 116912025 MODEL JAAIVD010000006;XM_032915913 XP_032771804 ubiquitin-conjugating enzyme E2 D4 protein-coding 625887181 Ppme1 protein phosphatase methylesterase 1 ENCODES a protein that exhibits lncRNA binding (ortholog); protein kinase binding (ortholog); protein methylesterase activity (ortholog); INVOLVED IN protein phosphorylation (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) 2 98619972 98668245 - 22301074;30032202 116891738 MODEL JAAIVD010000001;XM_032893042 XP_032748933 protein-coding 625887199 LOC116892050 zinc finger protein interacting with ribonucleoprotein K 2 143774115 143782403 - 30032202 116892050 MODEL JAAIVD010000001;XM_032893521 XP_032749412 protein-coding 625887206 Dus3l dihydrouridine synthase 3 like ENCODES a protein that exhibits mRNA dihydrouridine synthase activity (ortholog); tRNA-dihydrouridine47 synthase activity (ortholog); INVOLVED IN regulation of translation (ortholog); tRNA dihydrouridine synthesis (ortholog) 4 88136212 88140889 + 22301074;30032202 116899195 MODEL JAAIVD010000003;XM_032900780 XP_032756671 tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like protein-coding 625887223 Dgkk diacylglycerol kinase kappa ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); intracellular signal transduction (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH hypospadias (ortholog); FOUND IN plasma membrane (ortholog) X 79681342 79771535 + 22301074;30032202 116888014 MODEL JAAIVD010000014;XM_032889428 XP_032745319 protein-coding 625887250 LOC116900578 olfactory receptor 4F3/4F16/4F29-like 5 90383473 90384420 - 22301074 116900578 MODEL JAAIVD010000023;XM_032902301 XP_032758192 protein-coding 625887254 Arhgef17 Rho guanine nucleotide exchange factor 17 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog) 2 99175642 99230727 - 22301074;30032202 116891750 MODEL JAAIVD010000001;XM_032893063 XP_032748954 protein-coding 625887278 Atp5f1b ATP synthase F1 subunit beta ENCODES a protein that exhibits ADP binding (ortholog); angiostatin binding (ortholog); ATP binding (ortholog); INVOLVED IN angiogenesis (ortholog); ATP biosynthetic process (ortholog); cellular response to interleukin-7 (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH acute kidney failure (ortholog); cardiomyopathy (ortholog); COVID-19 (ortholog); FOUND IN cell surface (ortholog); membrane (ortholog); membrane raft (ortholog) 1 155564400 155570599 + 22301074;30032202 116905864 MODEL JAAIVD010000025;XM_032908855 XP_032764746 ATP synthase subunit beta, mitochondrial protein-coding 625887292 Pde11a phosphodiesterase 11A ENCODES a protein that exhibits 3',5'-cGMP-stimulated cyclic-nucleotide phosphodiesterase activity (ortholog); cGMP binding (ortholog); INVOLVED IN negative regulation of cAMP/PKA signal transduction (ortholog); negative regulation of receptor guanylyl cyclase signaling pathway (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Bardet-Biedl syndrome 16 (ortholog); primary pigmented nodular adrenocortical disease 2 (ortholog); schizophrenia (ortholog); FOUND IN cytosol (ortholog); perikaryon (ortholog) 5 53343509 53566879 - 22301074 116900841 MODEL JAAIVD010000023;XM_032902539 XP_032758430 dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A protein-coding 625887313 Kctd18 potassium channel tetramerization domain containing 18 4 134419634 134432705 + 22301074 116899436 MODEL JAAIVD010000003;XM_032901191;XM_032901192 XP_032757082;XP_032757083 BTB/POZ domain-containing protein KCTD18 protein-coding 625887326 LOC116889429 U6 spliceosomal RNA X 4202614 4202716 - 116889429 MODEL JAAIVD010000014;XR_004386393 snrna 625887329 Malrd1 MAM and LDL receptor class A domain containing 1 INVOLVED IN cholesterol homeostasis (ortholog); negative regulation of bile acid biosynthetic process (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog) 14 7561421 8245540 - 22301074 116883511 MODEL JAAIVD010000009;XM_032884682 XP_032740573 MAM and LDL-receptor class A domain-containing protein 1 protein-coding 625887372 LOC116886752 small nucleolar RNA SNORD111 17 30549613 30549688 - 116886752 MODEL JAAIVD010000011;XR_004386154 snorna 625887375 Mdn1 midasin AAA ATPase 1 INVOLVED IN ribosomal large subunit assembly (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH long QT syndrome (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) 1 110246875 110370913 - 22301074;30032202 116902371 MODEL JAAIVD010000025;XM_032904871 XP_032760762 midasin protein-coding 625887481 LOC116908059 zinc finger and SCAN domain containing protein 4F-like 1 158380166 158383253 + 30032202 116908059 MODEL JAAIVD010000025;XM_032911366 XP_032767257 protein-coding 625887486 LOC116899709 uncharacterized LOC116899709 4 180221894 180229829 - 116899709 MODEL JAAIVD010000003;XR_004387749 ncrna 625887490 LOC116914883 uncharacterized LOC116914883 13 9326350 9329257 + 116914883 MODEL JAAIVD010000008;XR_004389785 ncrna 625887494 Fgg fibrinogen gamma chain ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); identical protein binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN blood coagulation, fibrin clot formation (ortholog); cell-matrix adhesion (ortholog); cellular response to interleukin-1 (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH blood coagulation disease (ortholog); brain small vessel disease (ortholog); congenital afibrinogenemia (ortholog); FOUND IN blood microparticle (ortholog); cell cortex (ortholog); cell surface (ortholog) 3 70510611 70517894 - 22301074;30032202 116895442 MODEL JAAIVD010000012;XM_032896719;XM_032896720;XM_032896721 XP_032752610;XP_032752611;XP_032752612 protein-coding 625887516 LOC116887132 heat shock 70 kDa protein 1A 18 7551360 7553965 - 22301074;30032202 116887132 MODEL JAAIVD010000013;XM_032888679;Z27118 CAA81642;XP_032744570 heat shock rotein 70 protein-coding 625887522 LOC116894161 olfactory receptor 2D3-like 2 105000742 105001672 - 116894161 MODEL JAAIVD010000001 pseudo 625887523 LOC116913919 SIN3-HDAC complex-associated factor-like 12 28801308 28804293 - 116913919 MODEL JAAIVD010000007 pseudo 625887524 Tnfsf15 TNF superfamily member 15 INVOLVED IN activation of NF-kappaB-inducing kinase activity (ortholog); ASSOCIATED WITH Crohn's disease (ortholog); Enteritis (ortholog); Inflammation (ortholog); FOUND IN plasma membrane (ortholog) 1 89842566 89859134 + 22301074 116901235 MODEL JAAIVD010000025;XM_032902984 XP_032758875 tumor necrosis factor ligand superfamily member 15 protein-coding 625887532 LOC116905472 uncharacterized LOC116905472 7 128050124 128054685 - 116905472 MODEL JAAIVD010000026;XR_004388542 ncrna 625887537 Cbl Cbl proto-oncogene ENCODES a protein that exhibits ephrin receptor binding (ortholog); phosphatidylinositol 3-kinase regulatory subunit binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); cellular response to nerve growth factor stimulus (ortholog); cellular response to platelet-derived growth factor stimulus (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; epidermal growth factor/neuregulin signaling pathway; erythropoietin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); B-lymphoblastic leukemia/lymphoma with hyperdiploidy (ortholog); FOUND IN axon (ortholog); cilium (ortholog); cytosol (ortholog) 8 38711551 38790998 - 22301074;30032202 116908054 MODEL JAAIVD010000027;XM_032911326;XM_032911327 XP_032767217;XP_032767218 E3 ubiquitin-protein ligase CBL protein-coding 625887558 Dync1h1 dynein cytoplasmic 1 heavy chain 1 ENCODES a protein that exhibits dynein light intermediate chain binding (ortholog); identical protein binding (ortholog); minus-end-directed microtubule motor activity (ortholog); INVOLVED IN cellular response to 3,3',5-triiodo-L-thyronine (ortholog); cellular response to nerve growth factor stimulus (ortholog); establishment of spindle localization (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); asphyxiating thoracic dystrophy 3 (ortholog); FOUND IN axon (ortholog); centrosome (ortholog); cytoplasm (ortholog) 7 128163645 128230779 + 22301074;30032202 116905474 MODEL JAAIVD010000026;XM_032908444;XM_032908445 XP_032764335;XP_032764336 cytoplasmic dynein 1 heavy chain 1 protein-coding 625887642 Gast gastrin ENCODES a protein that exhibits hormone activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN cimetidine pharmacodynamics pathway; esomeprazole pharmacodynamics pathway; famotidine pharmacodynamics pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Barrett's esophagus (ortholog); Colonic Neoplasms (ortholog); FOUND IN extracellular region (ortholog) 9 59638156 59640821 + 22301074;30032202 116910069 MODEL JAAIVD010000002;XM_032913882;XM_032913883 XP_032769773;XP_032769774 protein-coding 625887652 LOC116913880 heterogeneous nuclear ribonucleoprotein D-like 12 15606988 15616463 - 116913880 MODEL JAAIVD010000007 pseudo 625887653 Usp30 ubiquitin specific peptidase 30 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); cysteine-type endopeptidase activity (ortholog); INVOLVED IN mitochondrial fusion (ortholog); negative regulation of mitophagy (ortholog); protein deubiquitination (ortholog); PARTICIPATES IN mitochondrial autophagy pathway; FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 16 39845271 39869261 - 22301074;30032202 116885448 MODEL JAAIVD010000004;XM_032886731;XM_032886732 XP_032742622;XP_032742623 ubiquitin carboxyl-terminal hydrolase 30 protein-coding 625887674 LOC116913226 60S ribosomal protein L13-like 1 176499180 176499828 + 116913226 MODEL JAAIVD010000025 pseudo 625887675 Pdpr pyruvate dehydrogenase phosphatase regulatory subunit INVOLVED IN positive regulation of pyruvate decarboxylation to acetyl-CoA (ortholog); ASSOCIATED WITH Joubert syndrome (ortholog); FOUND IN mitochondrion (ortholog) 17 30792143 30835849 + 22301074;30032202 116886089 MODEL JAAIVD010000011;XM_032887407;XM_032887408;XM_032887409 XP_032743298;XP_032743299;XP_032743300 pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial protein-coding 625887705 LOC116895168 alpha-enolase-like 3 67067523 67081880 + 116895168 MODEL JAAIVD010000012 pseudo 625887706 Pdzrn4 PDZ domain containing ring finger 4 ASSOCIATED WITH silicosis (ortholog) 1 265407971 265753222 + 22301074 116884237 MODEL JAAIVD010000025;XM_032885327 XP_032741218 PDZ domain-containing RING finger protein 4 protein-coding 625887719 LOC116894774 cytochrome P450 2C13, male-specific-like 2 224623898 224682936 + 22301074;30032202 116894774 MODEL JAAIVD010000001;XM_032896429 XP_032752320 protein-coding 625887731 LOC116905407 WD repeat-containing protein 60 7 120171454 120193635 + 30032202 116905407 MODEL JAAIVD010000026;XM_032908369;XM_032908370 XP_032764260;XP_032764261 protein-coding 625887751 Fmo2 flavin containing dimethylaniline monoxygenase 2 ENCODES a protein that exhibits flavin adenine dinucleotide binding (inferred); monooxygenase activity (inferred); N,N-dimethylaniline monooxygenase activity (inferred); INVOLVED IN energy homeostasis (ortholog); NADP+ metabolic process (ortholog); negative regulation of fatty acid oxidation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); basal cell carcinoma (ortholog); endometriosis (ortholog); FOUND IN membrane (ortholog) 10 42144509 42164163 - 11906197;22301074;30032202 116911123 Q8K4B8 MODEL AF458415;JAAIVD010000005;XM_032914969 AAM46763;XP_032770860 dimethylaniline monooxygenase [N-oxide-forming] 2;flavin-containing monooxygenase 2 protein-coding 625887763 Kctd2 potassium channel tetramerization domain containing 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog) 9 68668776 68680294 - 22301074;30032202 116908846 MODEL JAAIVD010000002;XM_032912275 XP_032768166 BTB/POZ domain-containing protein KCTD2 protein-coding 625887773 LOC116900024 60S ribosomal protein L34-like 5 11518542 11518916 - 116900024 MODEL JAAIVD010000023 pseudo 625887774 Blk BLK proto-oncogene, Src family tyrosine kinase ENCODES a protein that exhibits non-membrane spanning protein tyrosine kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); peptidyl-tyrosine phosphorylation (ortholog); positive regulation of insulin secretion (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; glypican signaling pathway; ASSOCIATED WITH diabetes mellitus (ortholog); Kawasaki disease (ortholog); maturity-onset diabetes of the young (ortholog) 12 60999528 61013665 + 22301074;30032202 116913433 MODEL JAAIVD010000007;XM_032917629 XP_032773520 tyrosine-protein kinase Blk protein-coding 625887789 LOC116906349 small nucleolar RNA SNORD113/SNORD114 family 7 127216389 127216460 + 116906349 MODEL JAAIVD010000026;XR_004388628 snorna 625887792 LOC116914160 U2 spliceosomal RNA 12 76198821 76198906 + 116914160 MODEL JAAIVD010000007 pseudo 625887793 LOC116896102 uncharacterized LOC116896102 3 81972316 81985772 + 116896102 MODEL JAAIVD010000012;XR_004387310 ncrna 625887797 Fam219a family with sequence similarity 219 member A 1 3981800 4031993 + 116891339 MODEL JAAIVD010000025;XM_032892288;XM_032892299;XM_032892310;XM_032892321;XM_032892331;XM_032892338 XP_032748179;XP_032748190;XP_032748201;XP_032748212;XP_032748222;XP_032748229 protein FAM219A protein-coding 625887817 LOC116911585 poly(A) RNA polymerase GLD2-like 10 18552272 18555482 + 116911585 MODEL JAAIVD010000005 pseudo 625887818 Adgrd1 adhesion G protein-coupled receptor D1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); regulation of skeletal muscle contraction (ortholog); FOUND IN plasma membrane (ortholog) 16 24765083 24876155 - 22301074;30032202 116885595 MODEL JAAIVD010000004;XM_032886900;XM_032886901 XP_032742791;XP_032742792 adhesion G-protein coupled receptor D1 protein-coding 625887848 LOC116912863 whey acidic protein 11 75566720 75568764 - 22301074 116912863 MODEL JAAIVD010000006;XM_032917079 XP_032772970 protein-coding 625887856 LOC116903875 zinc finger protein 398 6 93010971 93040214 - 30032202 116903875 MODEL JAAIVD010000024;XM_032906628 XP_032762519 protein-coding 625887866 LOC116889358 eukaryotic translation initiation factor 3 subunit K-like X 39294133 39294768 + 116889358 MODEL JAAIVD010000014 pseudo 625887867 Kxd1 KxDL motif containing 1 INVOLVED IN lysosome localization (ortholog); vesicle-mediated transport (ortholog); ASSOCIATED WITH Hermansky-Pudlak syndrome (ortholog); FOUND IN BLOC-1 complex (ortholog); BORC complex (ortholog) 13 12767521 12780860 - 30032202 116914264 MODEL JAAIVD010000008;XM_032918482;XM_032918483;XM_032918484;XM_032918485 XP_032774373;XP_032774374;XP_032774375;XP_032774376 kxDL motif-containing protein 1 protein-coding 625887886 Pip5k1a phosphatidylinositol-4-phosphate 5-kinase type 1 alpha ENCODES a protein that exhibits 1-phosphatidylinositol-4-phosphate 5-kinase activity (ortholog); kinase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell chemotaxis (ortholog); fibroblast migration (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; E-cadherin signaling pathway; phosphoinositide metabolic pathway; ASSOCIATED WITH autosomal dominant intellectual developmental disorder 60 with seizures (ortholog); Experimental Neoplasms (ortholog); Lymphatic Metastasis (ortholog); FOUND IN cytosol (ortholog); lamellipodium (ortholog); nuclear speck (ortholog) 3 62149717 62191679 + 22301074 116896570 MODEL JAAIVD010000012;XM_032897779;XM_032897781 XP_032753670;XP_032753672 phosphatidylinositol 4-phosphate 5-kinase type-1 alpha protein-coding 625887907 Tgfb2 transforming growth factor beta 2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN ascending aorta morphogenesis (ortholog); atrial septum morphogenesis (ortholog); atrial septum primum morphogenesis (ortholog); PARTICIPATES IN glypican signaling pathway; Hedgehog signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Aberrant Crypt Foci (ortholog); aortic aneurysm (ortholog); aortic disease (ortholog); FOUND IN axon (ortholog); basement membrane (ortholog); cell surface (ortholog) 10 64761730 64846738 - 22301074;30032202 116911413 MODEL JAAIVD010000005;XM_032915375;XM_032915376 XP_032771266;XP_032771267 transforming growth factor beta-2 proprotein protein-coding 625887922 LOC116889500 small nucleolar RNA SNORA48 X 35435687 35435828 - 116889500 MODEL JAAIVD010000014;XR_004386447 snorna 625887925 LOC116894094 olfactory receptor 51L1-like 2 103294104 103295060 + 22301074 116894094 MODEL JAAIVD010000001;XM_032895813 XP_032751704 protein-coding 625887928 Prps2 phosphoribosyl pyrophosphate synthetase 2 ENCODES a protein that exhibits ADP binding (ortholog); AMP binding (ortholog); ATP binding (ortholog); INVOLVED IN 5-phosphoribose 1-diphosphate biosynthetic process (ortholog); AMP biosynthetic process (ortholog); animal organ regeneration (ortholog); PARTICIPATES IN de novo purine biosynthetic pathway; FOUND IN cytosol (ortholog); protein-containing complex (ortholog); ribose phosphate diphosphokinase complex (ortholog) X 30019547 30055382 + 22301074;30032202 116888705 MODEL JAAIVD010000014;XM_032889995 XP_032745886 ribose-phosphate pyrophosphokinase 2 protein-coding 625887939 LOC116901295 epididymal-specific lipocalin-12 5 11675749 11684613 + 30032202 116901295 MODEL JAAIVD010000023;XM_032903092;XM_032903093 XP_032758983;XP_032758984 complement component C8 gamma chain protein-coding 625887956 Loxl3 lysyl oxidase like 3 ENCODES a protein that exhibits fibronectin binding (ortholog); protein-lysine 6-oxidase activity (ortholog); INVOLVED IN epithelial to mesenchymal transition (ortholog); fibronectin fibril organization (ortholog); inflammatory response (ortholog); ASSOCIATED WITH Disease Progression (ortholog); hepatocellular carcinoma (ortholog); Myopia 28 (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); nucleus (ortholog) 6 63173667 63190102 - 22301074;30032202 116903631 MODEL JAAIVD010000024;XM_032906290;XM_032906291;XM_032906292 XP_032762181;XP_032762182;XP_032762183 lysyl oxidase homolog 3 protein-coding 625887982 LOC116885254 transmembrane protein 132D-like 16 25688410 25824569 + 116885254 MODEL JAAIVD010000004;XM_032886492 XP_032742383 protein-coding 625887987 LOC116902965 L-lactate dehydrogenase A chain-like 6 125829175 125830182 - 116902965 MODEL JAAIVD010000024 pseudo 625887988 LOC116898442 60S ribosomal protein L36a-like 4 95157460 95170318 - 116898442 MODEL JAAIVD010000003 pseudo 625887989 LOC116903355 uncharacterized LOC116903355 6 28794100 28795027 + 116903355 MODEL JAAIVD010000024;XR_004388273 ncrna 625887995 LOC116910694 small nucleolar RNA SNORA51 9 72861209 72861334 - 116910694 MODEL JAAIVD010000002 pseudo 625887996 Dhrs1 dehydrogenase/reductase 1 ENCODES a protein that exhibits carbonyl reductase (NADPH) activity (ortholog); oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN endoplasmic reticulum (ortholog) 12 69256369 69263782 + 116913547 MODEL JAAIVD010000007;XM_032917752;XM_032917753;XM_032917754 XP_032773643;XP_032773644;XP_032773645 dehydrogenase/reductase SDR family member 1 protein-coding 625888017 Ccdc126 coiled-coil domain containing 126 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 6 91649832 91657207 - 116903833 MODEL JAAIVD010000024;XM_032906545 XP_032762436 coiled-coil domain-containing protein 126 protein-coding 625888023 LOC116912602 sulfotransferase family cytosolic 1B member 1 11 1389774 1405600 + 22301074;30032202 116912602 MODEL JAAIVD010000006;XM_032916725 XP_032772616 protein-coding 625888034 LOC116913028 U2 spliceosomal RNA 11 8098455 8098622 + 116913028 MODEL JAAIVD010000006 pseudo 625888035 LOC116889681 ATP-dependent zinc metalloprotease FtsH-like 22301074;30032202 116889681 MODEL JAAIVD010000051;XM_032890570 XP_032746461 protein-coding 625888036 LOC116894189 olfactory receptor 10T2-like 2 106088582 106089565 + 22301074 116894189 MODEL JAAIVD010000001;XM_032895904 XP_032751795 protein-coding 625888039 Mnd1 meiotic nuclear divisions 1 INVOLVED IN homologous chromosome pairing at meiosis (ortholog); reciprocal meiotic recombination (ortholog) 3 69439207 69499892 + 30032202 116896740 MODEL JAAIVD010000012;XM_032898173 XP_032754064 meiotic nuclear division protein 1 homolog protein-coding 625888052 LOC116887300 olfactory receptor 2B11-like 18 11039702 11040640 + 22301074 116887300 MODEL JAAIVD010000013;XM_032888882 XP_032744773 protein-coding 625888055 LOC116887207 cell division cycle-associated protein 3-like 18 43268200 43269067 - 116887207 MODEL JAAIVD010000013 pseudo 625888056 LOC116903383 uncharacterized LOC116903383 1 138169369 138175852 - 22301074 116903383 MODEL JAAIVD010000025;XM_032905919 XP_032761810 uncharacterized protein LOC116903383 protein-coding 625888060 LOC116909786 40S ribosomal protein S2-like 9 858694 859749 - 116909786 MODEL JAAIVD010000002 pseudo 625888061 LOC116900794 uncharacterized LOC116900794 5 157467818 157471049 - 116900794 MODEL JAAIVD010000023;XR_004387953 ncrna 625888066 LOC116899919 U1 spliceosomal RNA 4 90162984 90163135 + 116899919 MODEL JAAIVD010000003 pseudo 625888067 Ube2g2 ubiquitin conjugating enzyme E2 G2 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin conjugating enzyme activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to interferon-beta (ortholog); ERAD pathway (ortholog); negative regulation of retrograde protein transport, ER to cytosol (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); lipid droplet (ortholog) 18 965751 988026 + 30032202 116887130 MODEL JAAIVD010000013;XM_032888678 XP_032744569 ubiquitin-conjugating enzyme E2 G2 protein-coding 625888077 LOC116887198 mitochondrial import receptor subunit TOM7 homolog 1 38164468 38164629 + 116887198 MODEL JAAIVD010000025;XM_032888758 XP_032744649 protein-coding 625888080 LOC116883247 kinesin-like protein KIF11 14 67963987 67966414 - 116883247 MODEL JAAIVD010000009 pseudo 625888081 Prdm12 PR/SET domain 12 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN detection of temperature stimulus involved in sensory perception of pain (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); neurogenesis (ortholog); ASSOCIATED WITH Congenital Pain Insensitivity (ortholog); genetic disease (ortholog); hereditary sensory and autonomic neuropathy type 8 (ortholog); FOUND IN nucleus (ortholog) 5 3969733 3984007 - 30032202 116900050 MODEL JAAIVD010000023;XM_032901844 XP_032757735 PR domain zinc finger protein 12 protein-coding 625888088 LOC116902990 ferritin light chain 1-like 1 132661492 132663542 - 116902990 MODEL JAAIVD010000025 pseudo 625888089 Gadd45g growth arrest and DNA damage inducible gamma INVOLVED IN negative regulation of protein kinase activity (ortholog); positive regulation of apoptotic process (ortholog); positive regulation of cold-induced thermogenesis (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH mesangial proliferative glomerulonephritis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 14 70216781 70218635 + 30032202 116883838 MODEL JAAIVD010000009;XM_032885100 XP_032740991 growth arrest and DNA damage-inducible protein GADD45 gamma protein-coding 625888097 LOC116912202 UDP-glucuronosyltransferase 2B2-like 11 1533503 1551374 + 116912202 MODEL JAAIVD010000006 pseudo 625888098 LOC116897353 60S ribosomal protein L24-like 3 220263104 220263607 + 116897353 MODEL JAAIVD010000012 pseudo 625888099 LOC116895952 inosine-5'-monophosphate dehydrogenase 1-like 3 138480971 138486129 + 116895952 MODEL JAAIVD010000012 pseudo 625888100 LOC116904396 anionic trypsin-2-like 6 98595529 98598070 + 116904396 MODEL JAAIVD010000024 pseudo 625888101 Trim44 tripartite motif containing 44 INVOLVED IN negative regulation of protein K48-linked ubiquitination (ortholog); positive regulation of cytokine-mediated signaling pathway (ortholog); positive regulation of defense response to virus by host (ortholog); ASSOCIATED WITH aniridia (ortholog); Aniridia 3 (ortholog); Cardiomegaly (ortholog); FOUND IN cytoplasm (ortholog) 5 80128735 80240136 - 22301074 116901675 MODEL JAAIVD010000023;XM_032903790 XP_032759681 tripartite motif-containing protein 44 protein-coding 625888110 Alox12 arachidonate 12-lipoxygenase, 12S type ENCODES a protein that exhibits arachidonate 12(S)-lipoxygenase activity (ortholog); arachidonate 15-lipoxygenase activity (ortholog); linoleate 13S-lipoxygenase activity (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); cellular response to lipid (ortholog); establishment of skin barrier (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH Albuminuria (ortholog); autism spectrum disorder (ortholog); Bone Metastasis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) 9 49844164 49856477 - 22301074;30032202 116910124 MODEL JAAIVD010000002;XM_032913958 XP_032769849 arachidonate 12-lipoxygenase, 12S-type protein-coding 625888128 LOC116910716 small nucleolar RNA SNORA17 9 96340277 96340409 - 116910716 MODEL JAAIVD010000002;XR_004389243 snorna 625888131 Elk4 ETS transcription factor ELK4 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleoplasm (ortholog) 10 3811450 3836158 - 22301074;30032202 116911742 MODEL JAAIVD010000005;XM_032915723;XM_032915724;XM_032915725;XM_032915726;XM_032915727;XR_004389336 XP_032771614;XP_032771615;XP_032771616;XP_032771617;XP_032771618 ETS domain-containing protein Elk-4 protein-coding 625888154 Slc25a24 solute carrier family 25 member 24 ENCODES a protein that exhibits adenine nucleotide transmembrane transporter activity (ortholog); ADP:phosphate antiporter activity (ortholog); ATP transmembrane transporter activity (ortholog); INVOLVED IN adenine nucleotide transport (ortholog); cellular response to calcium ion (ortholog); cellular response to oxidative stress (ortholog); ASSOCIATED WITH dementia (ortholog); epilepsy with generalized tonic-clonic seizures (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN membrane (ortholog); mitochondrion (ortholog) 3 49131671 49158659 - 22301074;30032202 116896349 MODEL JAAIVD010000012;XM_032897451 XP_032753342 calcium-binding mitochondrial carrier protein SCaMC-1 protein-coding 625888166 Dhx37 DEAH-box helicase 37 ENCODES a protein that exhibits U3 snoRNA binding (ortholog); INVOLVED IN brain development (ortholog); positive regulation of male gonad development (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Anorchia (ortholog); coloboma of optic nerve (ortholog); epilepsy (ortholog); FOUND IN cytoplasm (ortholog); nuclear membrane (ortholog); nucleolus (ortholog) 16 28478041 28497249 + 22301074;30032202 116885603 MODEL JAAIVD010000004;XM_032886905 XP_032742796 probable ATP-dependent RNA helicase DHX37 protein-coding 625888197 Ctu1 cytosolic thiouridylase subunit 1 ASSOCIATED WITH Animal Disease Models (ortholog); Breast Neoplasms (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN cytosol (ortholog) 2 155721886 155726825 - 22301074;30032202 116893336 MODEL JAAIVD010000001;XM_032895150 XP_032751041 cytoplasmic tRNA 2-thiolation protein 1 protein-coding 625888203 Slc9b1 solute carrier family 9 member B1 INVOLVED IN flagellated sperm motility (ortholog); regulation of intracellular pH (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); FOUND IN cytosol (ortholog); sperm principal piece (ortholog) 3 23694162 23742217 - 22301074 116896223 MODEL JAAIVD010000012;XM_032897278 XP_032753169 sodium/hydrogen exchanger 9B1 protein-coding 625888220 LOC116911800 small nucleolar RNA SNORD79 10 40326784 40326868 + 116911800 MODEL JAAIVD010000005;XR_004389342 snorna 625888223 LOC116887104 keratin-associated protein 10-11-like 18 1126961 1127837 + 116887104 MODEL JAAIVD010000013 pseudo 625888224 LOC116889087 40S ribosomal protein S14-like X 15420811 15421316 - 116889087 MODEL JAAIVD010000014 pseudo 625888225 Ubxn4 UBX domain protein 4 INVOLVED IN ERAD pathway (ortholog); FOUND IN endoplasmic reticulum (ortholog) 10 7438840 7469823 - 22301074 116911022 MODEL JAAIVD010000005;XM_032914756;XM_032914757 XP_032770647;XP_032770648 UBX domain-containing protein 4 protein-coding 625888246 Eif6 eukaryotic translation initiation factor 6 ENCODES a protein that exhibits ribosome binding (ortholog); INVOLVED IN cytosolic ribosome assembly (ortholog); miRNA-mediated gene silencing by inhibition of translation (ortholog); miRNA-mediated post-transcriptional gene silencing (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); Breast Neoplasms (ortholog); human immunodeficiency virus infectious disease (ortholog); FOUND IN cytoplasm (ortholog); intermediate filament (ortholog); lamin filament (ortholog) 5 135173828 135180573 - 22301074;30032202 116902186 MODEL JAAIVD010000023;XM_032904552 XP_032760443 protein-coding 625888256 Coro1a coronin 1A ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); actin monomer binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament organization (ortholog); calcium ion transport (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); coronin-1A deficiency (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); axon (ortholog) 2 75199819 75204837 + 30032202 116891512 MODEL JAAIVD010000001;XM_032892648;XM_032892649 XP_032748539;XP_032748540 coronin-1A protein-coding 625888274 Cpne4 copine 4 FOUND IN glutamatergic synapse (ortholog); synapse (ortholog) 8 95883314 96335846 + 30032202 116907437 MODEL JAAIVD010000027;XM_032910406 XP_032766297 copine-4 protein-coding 625888294 LOC116911985 glyceraldehyde-3-phosphate dehydrogenase-like 1 167331303 167344527 - 116911985 MODEL JAAIVD010000025 pseudo 625888295 Eif4e eukaryotic translation initiation factor 4E ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); enzyme binding (ortholog); eukaryotic initiation factor 4G binding (ortholog); INVOLVED IN behavioral fear response (ortholog); cellular response to dexamethasone stimulus (ortholog); G1/S transition of mitotic cell cycle (ortholog); PARTICIPATES IN CRM1 export pathway; mTOR signaling pathway; translation initiation pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); mantle cell lymphoma (ortholog); FOUND IN chromatoid body (ortholog); cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog) 3 20593495 20624470 - 22301074;30032202 116896206 MODEL JAAIVD010000012;XM_032897254 XP_032753145 protein-coding 625888306 Grhl2 grainyhead like transcription factor 2 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); INVOLVED IN anterior neural tube closure (ortholog); bicellular tight junction assembly (ortholog); brain development (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 28 (ortholog); corneal dystrophy (ortholog); ECTODERMAL DYSPLASIA/SHORT STATURE SYNDROME (ortholog); FOUND IN cell-cell junction (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 210734885 210857307 + 30032202 116910633 MODEL JAAIVD010000025;XM_032914581 XP_032770472 grainyhead-like protein 2 homolog protein-coding 625888326 Fhod1 formin homology 2 domain containing 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN establishment of centrosome localization (ortholog); nuclear migration (ortholog); positive regulation of stress fiber assembly (ortholog); FOUND IN cytosol (ortholog); intercalated disc (ortholog); nucleus (ortholog) 17 25055361 25074025 - 30032202 116886347 MODEL JAAIVD010000011;XM_032887798 XP_032743689 FH1/FH2 domain-containing protein 1 protein-coding 625888352 LOC116895766 pancreatic alpha-amylase-like 3 46569187 46601419 + 116895766 MODEL JAAIVD010000012;XM_032896924 XP_032752815 protein-coding 625888360 Lactbl1 lactamase beta like 1 1 21592087 21605154 - 116890281 MODEL JAAIVD010000025;XM_032890994 XP_032746885 putative beta-lactamase-like 1 protein-coding 625888369 LOC116914155 uncharacterized LOC116914155 1 251729743 251735300 + 116914155 MODEL JAAIVD010000025;XR_004389709;XR_004389710 ncrna 625888376 Sec14l5 SEC14 like lipid binding 5 9 16722650 16762857 - 30032202 116909235 MODEL JAAIVD010000002;XM_032912736 XP_032768627 SEC14-like protein 5 protein-coding 625888396 Trnaq-cug transfer RNA glutamine (anticodon CUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 59627844 59627915 - 116897680 MODEL JAAIVD010000012 trna 625888397 LOC116887660 cadherin-23-like 18 26145375 26147665 - 22301074;30032202 116887660 MODEL JAAIVD010000013;XM_032889259 XP_032745150 protein-coding 625888402 LOC116889268 cell division cycle-associated 7-like protein X 87182316 87183632 + 116889268 MODEL JAAIVD010000014 pseudo 625888403 LOC116910227 E3 ubiquitin/ISG15 ligase TRIM25-like 9 68646462 68654559 - 22301074 116910227 MODEL JAAIVD010000002;XM_032914118 XP_032770009 protein-coding 625888413 LOC116904391 hsc70-interacting protein-like 6 95796818 95797600 - 116904391 MODEL JAAIVD010000024 pseudo 625888414 LOC116891961 heat shock cognate 71 kDa protein-like 2 124572001 124574083 - 116891961 MODEL JAAIVD010000001;XR_004386878 pseudo 625888417 Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 ENCODES a protein that exhibits transmembrane transporter binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN endoplasmic reticulum calcium ion homeostasis (ortholog); endoplasmic reticulum unfolded protein response (ortholog); ERAD pathway (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); Prostatic Neoplasms (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum quality control compartment (ortholog) 17 1295025 1305453 + 30032202 116886278 MODEL JAAIVD010000011;XM_032887699;XM_032887700;XM_032887701 XP_032743590;XP_032743591;XP_032743592 homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein protein-coding 625888437 Rpl11 ribosomal protein L11 ENCODES a protein that exhibits 5S rRNA binding (ortholog); peroxisome proliferator activated receptor binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); PARTICIPATES IN p53 signaling pathway; ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH anemia (ortholog); congenital hypoplastic anemia (ortholog); Diamond-Blackfan anemia (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosolic large ribosomal subunit (ortholog) 1 22183636 22187228 + 1599472;22301074;30032202 116894444 MODEL JAAIVD010000025;X62146;XM_032896150 CAA44072;XP_032752041 60S ribosomal protein L11 protein-coding 625888447 LOC116905059 glyceraldehyde-3-phosphate dehydrogenase-like 7 69439197 69440180 + 22301074;30032202 116905059 MODEL JAAIVD010000026;XM_032907752 XP_032763643 protein-coding 625888451 LOC116894114 putative olfactory receptor 56B2 2 103660095 103661054 + 22301074 116894114 MODEL JAAIVD010000001;XM_032895832 XP_032751723 protein-coding 625888454 Helz2 helicase with zinc finger 2 ENCODES a protein that exhibits exoribonuclease II activity (ortholog); RNA helicase activity (ortholog); transcription coactivator activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasm (ortholog) 5 158324633 158339224 - 22301074;30032202 116902433 MODEL JAAIVD010000023;XM_032904969 XP_032760860 helicase with zinc finger domain 2 protein-coding 625888477 Hal histidine ammonia-lyase ENCODES a protein that exhibits histidine ammonia-lyase activity (ortholog); INVOLVED IN cellular response to nutrient (ortholog); L-histidine catabolic process (ortholog); PARTICIPATES IN histidine metabolic pathway; histidinemia pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); histidinemia (ortholog) 1 172539406 172570014 + 22301074;30032202 116889980 MODEL JAAIVD010000025;XM_032890773 XP_032746664 protein-coding 625888501 Rwdd1 RWD domain containing 1 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); FOUND IN cytoplasm (ortholog) 18 24335538 24352772 + 22301074;30032202 116886900 MODEL JAAIVD010000013;XM_032888366;XM_032888367 XP_032744257;XP_032744258 RWD domain-containing protein 1 protein-coding 625888517 Tcf7 transcription factor 7 ENCODES a protein that exhibits beta-catenin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN alpha-beta T cell differentiation (ortholog); canonical Wnt signaling pathway (ortholog); cellular response to interleukin-4 (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Crohn's disease (ortholog); Mycoplasma pneumoniae pneumonia (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN euchromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 9 34748775 34779099 - 30032202 116909898 MODEL JAAIVD010000002;XM_032913649;XM_032913650 XP_032769540;XP_032769541 protein-coding 625888535 Tdrd5 tudor domain containing 5 INVOLVED IN P granule organization (ortholog); spermatid development (ortholog); transposable element silencing by piRNA-mediated DNA methylation (ortholog); FOUND IN chromatoid body (ortholog); pi-body (ortholog); synapse (ortholog) 10 35626581 35675057 - 22301074;30032202 116911169 MODEL JAAIVD010000005;XM_032915031 XP_032770922 tudor domain-containing protein 5 protein-coding 625888557 Dis3l DIS3 like exosome 3'-5' exoribonuclease ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); enzyme binding (ortholog); exoribonuclease II activity (ortholog); INVOLVED IN RNA catabolic process (ortholog); RNA processing (ortholog); rRNA catabolic process (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytoplasmic exosome (RNase complex) (ortholog); cytosol (ortholog) 8 58605086 58642699 - 22301074;30032202 116907006 MODEL JAAIVD010000027;XM_032909933;XM_032909934 XP_032765824;XP_032765825 DIS3-like exonuclease 1 protein-coding 625888580 LOC116895671 ubiquitin-conjugating enzyme E2 variant 1-like 3 196714112 196715010 + 30032202 116895671 MODEL JAAIVD010000012;XM_032896875 XP_032752766 protein-coding 625888585 LOC116897086 baculoviral IAP repeat-containing protein 1b-like 3 157697575 157712462 + 30032202 116897086 MODEL JAAIVD010000012;XM_032898719;XM_032898720;XM_032898721;XM_032898722;XM_032898723 XP_032754610;XP_032754611;XP_032754612;XP_032754613;XP_032754614 protein-coding 625888607 LOC116911270 glyceraldehyde-3-phosphate dehydrogenase-like 10 5286831 5287840 - 116911270 MODEL JAAIVD010000005 pseudo 625888608 LOC116908936 keratin-associated protein 9-1-like 9 54676947 54677882 + 22301074 116908936 MODEL JAAIVD010000002;XM_032912394 XP_032768285 protein-coding 625888613 Znf524 zinc finger protein 524 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog) 2 177591468 177594916 + 30032202 116892681 MODEL JAAIVD010000001;XM_032894522 XP_032750413 protein-coding 625888619 LOC116909907 60S ribosomal protein L7a-like 9 10991095 10991644 - 116909907 MODEL JAAIVD010000002 pseudo 625888620 LOC116899925 U1 spliceosomal RNA 4 170617683 170617846 + 116899925 MODEL JAAIVD010000003;XR_004387895 snrna 625888623 Ttll8 tubulin tyrosine ligase like 8 ENCODES a protein that exhibits protein-glycine ligase activity (ortholog); protein-glycine ligase activity, initiating (ortholog); INVOLVED IN cilium assembly (ortholog); flagellated sperm motility (ortholog); protein polyglycylation (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); microtubule cytoskeleton (ortholog) 1 258230296 258272513 - 30032202 116914872 MODEL JAAIVD010000025;XM_032919319 XP_032775210 protein monoglycylase TTLL8 protein-coding 625888638 Tbpl1 TATA-box binding protein like 1 ENCODES a protein that exhibits RNA polymerase II core promoter sequence-specific DNA binding (ortholog); RNA polymerase II general transcription initiation factor activity (ortholog); INVOLVED IN acrosome assembly (ortholog); dTTP biosynthetic process (ortholog); spermatid nucleus differentiation (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 208731985 208757813 - 22301074;30032202 116892938 MODEL JAAIVD010000001;XM_032894880;XM_032894881;XM_032894882 XP_032750771;XP_032750772;XP_032750773 TATA box-binding protein-like protein 1 protein-coding 625888655 LOC116888106 fatty acyl-CoA reductase 1-like X 99259395 99260927 - 116888106 MODEL JAAIVD010000014 pseudo 625888656 Psmb5 proteasome 20S subunit beta 5 ENCODES a protein that exhibits peptidase activity (ortholog); threonine-type endopeptidase activity (ortholog); INVOLVED IN proteasomal protein catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); proteolysis (ortholog); ASSOCIATED WITH Myocardial Ischemia (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 12 70382226 70387127 + 22301074 116913735 MODEL D45247;JAAIVD010000007;XM_032918039 BAA08204;XP_032773930 proteasome subunit beta type-5 protein-coding 625888663 LOC116888919 chromodomain Y-like protein X 56632214 56633101 - 30032202 116888919 MODEL JAAIVD010000014;XM_032890167 XP_032746058 protein-coding 625888666 Atp10d ATPase phospholipid transporting 10D (putative) ENCODES a protein that exhibits glycosylceramide flippase activity (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); phospholipid-translocating ATPase complex (ortholog); plasma membrane (ortholog) 11 29052257 29114439 + 22301074;30032202 116912554 MODEL JAAIVD010000006;XM_032916654 XP_032772545 probable phospholipid-transporting ATPase VD protein-coding 625888692 Zbtb5 zinc finger and BTB domain containing 5 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleus (ortholog) 1 1500973 1521212 + 22301074;30032202 116890836 MODEL JAAIVD010000025;XM_032891365;XM_032891372;XM_032891383 XP_032747256;XP_032747263;XP_032747274 zinc finger and BTB domain-containing protein 5 protein-coding 625888706 Gpr153 G protein-coupled receptor 153 ASSOCIATED WITH Childhood Schizophrenia (ortholog); schizophrenia (ortholog) 1 8458190 8464395 - 22301074;30032202 116892280 MODEL JAAIVD010000025;XM_032893876;XM_032893885;XM_032893894 XP_032749767;XP_032749776;XP_032749785 probable G-protein coupled receptor 153 protein-coding 625888723 LOC116897912 ribosome biogenesis protein NSA2 homolog 4 37601183 37602126 + 116897912 MODEL JAAIVD010000003 pseudo 625888724 Wdr62 WD repeat domain 62 INVOLVED IN centriole replication (ortholog); cerebral cortex development (ortholog); mitotic spindle organization (ortholog); ASSOCIATED WITH autosomal recessive primary microcephaly (ortholog); complex cortical dysplasia with other brain malformations (ortholog); Dwarfism (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); nucleus (ortholog) 2 165729950 165768904 + 22301074;30032202 116892328 MODEL JAAIVD010000001;XM_032893954;XM_032893955;XM_032893956 XP_032749845;XP_032749846;XP_032749847 WD repeat-containing protein 62 protein-coding 625888764 LOC116901719 uncharacterized LOC116901719 1 94808632 94822424 - 116901719 MODEL JAAIVD010000025;XR_004388012 ncrna 625888768 LOC116895574 phosphoglycerate kinase 1-like 3 135492723 135493963 - 116895574 MODEL JAAIVD010000012 pseudo 625888769 LOC116895218 40S ribosomal protein S12-like 3 14342782 14346371 + 116895218 MODEL JAAIVD010000012 pseudo 625888770 Dtwd2 DTW motif tRNA-uridine aminocarboxypropyltransferase 2 ENCODES a protein that exhibits tRNA-uridine aminocarboxypropyltransferase activity (ortholog); INVOLVED IN glycoRNA biosynthetic process (ortholog); tRNA modification (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 15 36920597 36983360 + 116884718 MODEL JAAIVD010000010;XM_032885904 XP_032741795 DTW domain containing 2;DTW domain-containing protein 2 protein-coding 625888780 LOC116904867 60S ribosomal protein L13-like 7 44881016 44881629 - 22301074;30032202 116904867 MODEL JAAIVD010000026;XM_032907459 XP_032763350 protein-coding 625888785 Klk5 kallikrein related peptidase 5 ENCODES a protein that exhibits peptidase activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN antibacterial peptide biosynthetic process (ortholog); positive regulation of G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN epidermal lamellar body (ortholog); extracellular region (ortholog) 2 155541839 155550411 - 22301074;30032202 116894356 MODEL JAAIVD010000001;XM_032896058 XP_032751949 kallikrein-5 protein-coding 625888792 Gpm6b glycoprotein M6B INVOLVED IN extracellular matrix assembly (ortholog); negative regulation of protein localization to cell surface (ortholog); negative regulation of serotonin uptake (ortholog); FOUND IN membrane raft (ortholog); plasma membrane (ortholog) X 30366089 30511924 + 30032202 116888313 MODEL JAAIVD010000014;XM_032889583;XM_032889584;XM_032889585;XM_032889586;XM_032889587 XP_032745474;XP_032745475;XP_032745476;XP_032745477;XP_032745478 neuronal membrane glycoprotein M6-b protein-coding 625888818 Pias3 protein inhibitor of activated STAT 3 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); NF-kappaB binding (ortholog); potassium channel regulator activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of gene expression (ortholog); negative regulation of osteoclast differentiation (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; Jak-Stat signaling pathway; sumoylation pathway; ASSOCIATED WITH Uterine Cervical Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) 3 60599645 60607731 - 22301074;30032202 116896501 MODEL JAAIVD010000012;XM_032897675;XM_032897676 XP_032753566;XP_032753567 E3 SUMO-protein ligase PIAS3 protein-coding 625888839 LOC116888269 AF4/FMR2 family member 2-like X 127580315 127753885 + 30032202 116888269 MODEL JAAIVD010000014;XM_032889545;XM_032889546 XP_032745436;XP_032745437 protein-coding 625888851 LOC116914693 actin, alpha skeletal muscle-like 13 24051352 24051763 + 116914693 MODEL JAAIVD010000008 pseudo 625888852 Trnae-uuc transfer RNA glutamic acid (anticodon UUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 12 50815957 50816028 + 116914215 MODEL JAAIVD010000007 trna 625888853 Pknox1 PBX/knotted 1 homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN angiogenesis (ortholog); camera-type eye development (ortholog); erythrocyte differentiation (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) 18 2255218 2296755 - 30032202 116887022 MODEL JAAIVD010000013;XM_032888511;XM_032888512;XM_032888513;XM_032888514;XM_032888515;XM_032888516 XP_032744402;XP_032744403;XP_032744404;XP_032744405;XP_032744406;XP_032744407 homeobox protein PKNOX1 protein-coding 625888880 Cd320 CD320 molecule ENCODES a protein that exhibits calcium ion binding (ortholog); cargo receptor activity (ortholog); cobalamin binding (ortholog); INVOLVED IN B cell costimulation (ortholog); cobalamin transport (ortholog); positive regulation of B cell proliferation (ortholog); ASSOCIATED WITH methylmalonic acidemia due to transcobalamin receptor defect (ortholog); FOUND IN endoplasmic reticulum (ortholog); plasma membrane (ortholog) 1 158568912 158574590 - 22301074;30032202 116906987 MODEL JAAIVD010000025;XM_032909917;XM_032909925 XP_032765808;XP_032765816 CD320 antigen protein-coding 625888893 Coq10a coenzyme Q10A ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN mitochondrion (ortholog) 1 155833407 155839303 - 22301074;30032202 116906001 MODEL JAAIVD010000025;XM_032909044;XM_032909050;XM_032909058 XP_032764935;XP_032764941;XP_032764949 coenzyme Q-binding protein COQ10 homolog A, mitochondrial protein-coding 625888909 Ypel2 yippee like 2 9 83824152 83856359 + 116908935 MODEL JAAIVD010000002;XM_032912392 XP_032768283 protein yippee-like 2 protein-coding 625888917 LOC116889607 ferritin light chain 1-like 1 142113444 142114192 + 116889607 MODEL JAAIVD010000025;XR_004386503 pseudo 625888920 LOC116895224 guanylate-binding protein 4-like 3 18089626 18098490 + 22301074;30032202 116895224 MODEL JAAIVD010000012;XM_032896552 XP_032752443 protein-coding 625888929 Adamts10 ADAM metallopeptidase with thrombospondin type 1 motif 10 ASSOCIATED WITH genetic disease (ortholog); optic nerve disease (ortholog); primary open angle glaucoma (ortholog); FOUND IN extracellular matrix (ortholog) 1 158836733 158866743 - 22301074;30032202 116907042 MODEL JAAIVD010000025;XM_032910011;XR_004388796;XR_004388797;XR_004388798;XR_004388799 XP_032765902 A disintegrin and metalloproteinase with thrombospondin motifs 10 protein-coding 625888969 Setbp1 SET binding protein 1 ASSOCIATED WITH atrial heart septal defect (ortholog); atypical chronic myeloid leukemia, BCR-ABL1 negative (ortholog); autosomal dominant intellectual developmental disorder 29 (ortholog); FOUND IN nuclear body (ortholog); nuclear membrane (ortholog); nucleoplasm (ortholog) 15 53061545 53427392 + 22301074 116884787 MODEL JAAIVD010000010;XM_032886020 XP_032741911 SET-binding protein protein-coding 625888979 Slc35h1 solute carrier family 35 member H1 INVOLVED IN negative regulation of gene expression (ortholog); positive regulation of Notch signaling pathway (ortholog); protein O-linked glycosylation via fucose (ortholog); FOUND IN cis-Golgi network (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog) 5 152677114 152684401 + 30032202 116902336 MODEL JAAIVD010000023;XM_032904811;XM_032904812 XP_032760702;XP_032760703 Slc35c2 solute carrier family 35 member C2 protein-coding 625888996 LOC116886258 AP-3 complex subunit sigma-1-like 17 21976853 21977636 - 22301074;30032202 116886258 MODEL JAAIVD010000011;XM_032887678 XP_032743569 protein-coding 625889002 Treh trehalase ENCODES a protein that exhibits alpha,alpha-trehalase activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); trehalose catabolic process (ortholog); PARTICIPATES IN trehalose degradation pathway; ASSOCIATED WITH Trehalase Deficiency (ortholog) 8 39207214 39220052 + 22301074;30032202 116908297 MODEL JAAIVD010000027;XM_032911575;XM_032911577 XP_032767466;XP_032767468 protein-coding 625889025 Trnaa-agc transfer RNA alanine (anticodon AGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 5 153923965 153924036 + 116902680 MODEL JAAIVD010000023 trna 625889026 Riok1 RIO kinase 1 INVOLVED IN maturation of SSU-rRNA (ortholog); positive regulation of rRNA processing (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); methyltransferase complex (ortholog) 14 57078962 57101266 + 22301074;30032202 116883545 MODEL JAAIVD010000009;XM_032884715 XP_032740606 serine/threonine-protein kinase RIO1 protein-coding 625889047 Ptch2 patched 2 ENCODES a protein that exhibits hedgehog family protein binding (ortholog); smoothened binding (ortholog); INVOLVED IN cell fate determination (ortholog); epidermal cell fate specification (ortholog); epidermis development (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); breast carcinoma (ortholog); FOUND IN plasma membrane (ortholog) 1 40720334 40739409 + 22301074;30032202 116898639 MODEL JAAIVD010000025;XM_032899865 XP_032755756 protein patched homolog 2 protein-coding 625889073 Brwd3 bromodomain and WD repeat domain containing 3 ASSOCIATED WITH autism spectrum disorder (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog) X 62921656 63014032 - 22301074;30032202 116887804 MODEL JAAIVD010000014;XM_032889330 XP_032745221 bromodomain and WD repeat-containing protein 3 protein-coding 625889118 LOC116893535 geranylgeranyl transferase type-2 subunit beta-like 2 200961740 200962528 + 116893535 MODEL JAAIVD010000001 pseudo 625889119 A3galt2 alpha 1,3-galactosyltransferase 2 ENCODES a protein that exhibits alpha-1,3-galactosyltransferase activity (ortholog); glycosyltransferase activity (ortholog); N-acetyllactosaminide 3-alpha-galactosyltransferase activity (ortholog); INVOLVED IN cellular response to manganese ion (ortholog); glycosphingolipid biosynthetic process (ortholog); FOUND IN Golgi apparatus (ortholog); vesicle (ortholog) 1 29369079 29381326 - 22301074;30032202 116896398 MODEL JAAIVD010000025;XM_032897539 XP_032753430 alpha-1,3-galactosyltransferase 2 protein-coding 625889128 Mob2 MOB kinase activator 2 INVOLVED IN actin cytoskeleton organization (ortholog); positive regulation of neuron projection development (ortholog); positive regulation of protein phosphorylation (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); neuron projection terminus (ortholog) 2 7457783 7514479 + 30032202 116890851 MODEL JAAIVD010000001;XM_032891393;XM_032891394;XM_032891396;XM_032891397;XM_032891398;XM_032891399;XM_032891400 XP_032747284;XP_032747285;XP_032747287;XP_032747288;XP_032747289;XP_032747290;XP_032747291 protein-coding 625889158 Trim58 tripartite motif containing 58 ENCODES a protein that exhibits dynein heavy chain binding (ortholog); dynein intermediate chain binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN positive regulation of erythrocyte enucleation (ortholog); protein autoubiquitination (ortholog); protein polyubiquitination (ortholog) 9 39390028 39400859 - 22301074 116910035 MODEL JAAIVD010000002;XM_032913820 XP_032769711 E3 ubiquitin-protein ligase TRIM58 protein-coding 625889166 Hsd11b2 hydroxysteroid 11-beta dehydrogenase 2 ENCODES a protein that exhibits 11-beta-hydroxysteroid dehydrogenase (NAD+) activity (ortholog); 7-beta-hydroxysteroid dehydrogenase (NADP+) activity (ortholog); NAD binding (ortholog); INVOLVED IN cortisol metabolic process (ortholog); female pregnancy (ortholog); glucocorticoid metabolic process (ortholog); PARTICIPATES IN 11-beta-hydroxylase deficiency pathway; 17-alpha-hydroxylase deficiency pathway; 21-alpha-hydroxylase deficiency pathway; ASSOCIATED WITH apparent mineralocorticoid excess syndrome (ortholog); asthma (ortholog); fetal alcohol spectrum disorder (ortholog) 17 25246753 25252022 + 22301074 116886663 MODEL JAAIVD010000011;XM_032888153;XM_032888154 XP_032744044;XP_032744045 corticosteroid 11-beta-dehydrogenase isozyme 2 protein-coding 625889178 Sh3d19 SH3 domain containing 19 ENCODES a protein that exhibits proline-rich region binding (ortholog); INVOLVED IN positive regulation of membrane protein ectodomain proteolysis (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 3 67430449 67593831 - 22301074 116896727 MODEL JAAIVD010000012;XM_032898150 XP_032754041 SH3 domain-containing protein 19 protein-coding 625889203 LOC116895014 small nucleolar RNA SNORA48 2 224214543 224214686 - 116895014 MODEL JAAIVD010000001;XR_004387201 snorna 625889206 Nhlh2 nescient helix-loop-helix 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN apoptotic process (ortholog); cell migration in hindbrain (ortholog); hypothalamus gonadotrophin-releasing hormone neuron development (ortholog); ASSOCIATED WITH hypogonadotropic hypogonadism (ortholog); Hypogonadotropic Hypogonadism 27 without Anosmia (ortholog); Klinefelter syndrome (ortholog); FOUND IN chromatin (ortholog) 3 56056382 56060925 - 22301074;30032202 116895383 MODEL JAAIVD010000012;XM_032896675;XM_032896676 XP_032752566;XP_032752567 helix-loop-helix protein 2 protein-coding 625889216 Lrp11 LDL receptor related protein 11 ENCODES a protein that exhibits phosphoprotein binding (ortholog); INVOLVED IN multicellular organismal response to stress (ortholog); response to cold (ortholog); response to heat (ortholog) 2 229415966 229445631 - 22301074 116893043 MODEL JAAIVD010000001;XM_032895012 XP_032750903 low-density lipoprotein receptor-related protein 11 protein-coding 625889227 LOC116893187 olfactory receptor 52N5-like 2 103890635 103891606 + 22301074 116893187 MODEL JAAIVD010000001;XM_032895090 XP_032750981 protein-coding 625889230 Fkbpl FKBP prolyl isomerase like INVOLVED IN regulation of angiogenesis (ortholog); regulation of blood vessel branching (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN extracellular region (ortholog) 18 7324164 7325690 + 22301074 116886834 MODEL JAAIVD010000013;XM_032888282 XP_032744173 FK506-binding protein-like protein-coding 625889236 LOC116888757 olfactory receptor 13F1-like 1 102203548 102204507 - 22301074 116888757 MODEL JAAIVD010000025;XM_032890053 XP_032745944 protein-coding 625889239 LOC116885856 WD repeat-containing protein on Y chromosome-like 16 4246483 4296564 - 22301074 116885856 MODEL JAAIVD010000004;XM_032887189 XP_032743080 protein-coding 625889261 Rps21 ribosomal protein S21 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); in utero embryonic development (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) 5 157335273 157336367 + 22301074;30032202 116902407 MODEL JAAIVD010000023;XM_032904936 XP_032760827 40S ribosomal protein S21 protein-coding 625889271 LOC116911690 torsin-1A-interacting protein 2-like 10 35472072 35486699 + 22301074;30032202 116911690 MODEL JAAIVD010000005;XM_032915647 XP_032771538 protein-coding 625889280 Sidt1 SID1 transmembrane family member 1 ENCODES a protein that exhibits cholesterol binding (ortholog); double-stranded RNA binding (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); Marfanoid Mental Retardation Syndrome, Autosomal (ortholog) 4 29125058 29214927 - 22301074;30032202 116898862 MODEL JAAIVD010000003;XM_032900229;XM_032900230 XP_032756120;XP_032756121 protein-coding 625889311 LOC116884714 polyadenylate-binding protein 1-like 15 5152586 5154846 - 30032202 116884714 MODEL JAAIVD010000010;XM_032885900 XP_032741791 protein-coding 625889315 Gdpd2 glycerophosphodiester phosphodiesterase domain containing 2 ENCODES a protein that exhibits C-type glycerophospholipase activity (ortholog); glycerophosphoinositol inositolphosphodiesterase activity (ortholog); GPI anchor phospholipase C activity (ortholog); INVOLVED IN actin filament organization (ortholog); negative regulation of cell-matrix adhesion (ortholog); negative regulation of extracellular matrix disassembly (ortholog); FOUND IN actin filament (ortholog); lamellipodium (ortholog); plasma membrane (ortholog) X 58729135 58737772 - 22301074;30032202 116889084 MODEL JAAIVD010000014;XM_032890260 XP_032746151 glycerophosphoinositol inositolphosphodiesterase GDPD2 protein-coding 625889335 Usp42 ubiquitin specific peptidase 42 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); INVOLVED IN protein deubiquitination (ortholog) 16 9389382 9408350 + 22301074;30032202 116885581 MODEL JAAIVD010000004;XM_032886877 XP_032742768 ubiquitin carboxyl-terminal hydrolase 42 protein-coding 625889355 LOC116900087 eukaryotic translation initiation factor 4E-like 5 11329454 11330112 - 116900087 MODEL JAAIVD010000023 pseudo 625889356 KEG97_t19 tRNA-Leu MT 11656 11726 + 64988247 trna 625889357 LOC116887643 single-stranded DNA-binding protein, mitochondrial-like 18 15378439 15381649 - 116887643 MODEL JAAIVD010000013 pseudo 625889358 LOC116899926 U1 spliceosomal RNA 4 68508457 68508618 + 116899926 MODEL JAAIVD010000003;XR_004387896 snrna 625889361 LOC116908578 uncharacterized LOC116908578 9 2650237 2650971 + 116908578 MODEL JAAIVD010000002;XR_004388999 ncrna 625889366 LOC116887227 60 kDa heat shock protein, mitochondrial-like 18 28910731 28912618 - 116887227 MODEL JAAIVD010000013 pseudo 625889367 LOC116890621 U1 spliceosomal RNA 1 51983497 51983656 - 116890621 MODEL JAAIVD010000025;XR_004386768 snrna 625889370 LOC116889440 U6 spliceosomal RNA X 91241699 91241805 - 116889440 MODEL JAAIVD010000014;XR_004386402 snrna 625889373 Plpp4 phospholipid phosphatase 4 ENCODES a protein that exhibits diacylglycerol diphosphate phosphatase activity (ortholog); identical protein binding (ortholog); phosphatidate phosphatase activity (ortholog); INVOLVED IN blastocyst hatching (ortholog); phospholipid dephosphorylation (ortholog); regulation of calcium ion import (ortholog); ASSOCIATED WITH breast cancer (ortholog) 2 138496182 138575162 + 30032202 116892023 MODEL JAAIVD010000001;XM_032893482;XM_032893483 XP_032749373;XP_032749374 protein-coding 625889387 Scn11a sodium voltage-gated channel alpha subunit 11 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); voltage-gated sodium channel activity (ortholog); INVOLVED IN action potential (ortholog); action potential initiation (ortholog); acute inflammatory response (ortholog); ASSOCIATED WITH autosomal dominant distal hereditary motor neuronopathy 14 (ortholog); Charcot-Marie-Tooth disease (ortholog); Congenital Pain Insensitivity (ortholog); FOUND IN axon (ortholog); axonal growth cone (ortholog); C-fiber (ortholog) 8 110998417 111070628 - 22301074;30032202 116907919 MODEL JAAIVD010000027;XM_032911129;XM_032911130 XP_032767020;XP_032767021 sodium channel protein type 11 subunit alpha protein-coding 625889424 Epha2 EPH receptor A2 ENCODES a protein that exhibits ephrin receptor activity (ortholog); growth factor binding (ortholog); molecular function activator activity (ortholog); INVOLVED IN axial mesoderm formation (ortholog); blood vessel development (ortholog); blood vessel endothelial cell proliferation involved in sprouting angiogenesis (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH cataract (ortholog); cataract 6 multiple types (ortholog); disease of cellular proliferation (ortholog); FOUND IN cell junction (ortholog); cell surface (ortholog); focal adhesion (ortholog) 1 16816803 16845230 - 22301074;30032202 116893372 MODEL JAAIVD010000025;XM_032895174 XP_032751065 ephrin type-A receptor 2 protein-coding 625889445 Il15ra interleukin 15 receptor subunit alpha ENCODES a protein that exhibits interleukin-15 receptor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); interleukin-15-mediated signaling pathway (ortholog); negative regulation of neuron projection development (ortholog); PARTICIPATES IN Jak-Stat signaling pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); Human Influenza (ortholog); Pneumococcal Pneumonia (ortholog); FOUND IN cell surface (ortholog); cytoplasmic vesicle (ortholog); plasma membrane (ortholog) 14 17734633 17765069 + 30032202 116883656 MODEL JAAIVD010000009;XM_032884848;XM_032884849;XM_032884850 XP_032740739;XP_032740740;XP_032740741 interleukin-15 receptor subunit alpha protein-coding 625889459 LOC116902749 glyceraldehyde-3-phosphate dehydrogenase-like 6 62569822 62570814 + 116902749 MODEL JAAIVD010000024 pseudo 625889460 LOC116894096 putative olfactory receptor 52P1 2 103342758 103343707 + 22301074 116894096 MODEL JAAIVD010000001;XM_032895815 XP_032751706 protein-coding 625889463 Map4k5 mitogen-activated protein kinase kinase kinase kinase 5 ENCODES a protein that exhibits ATP binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN intracellular signal transduction (ortholog); PARTICIPATES IN tumor necrosis factor mediated signaling pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog) 7 83470972 83563479 - 22301074;30032202 116905125 MODEL JAAIVD010000026;XM_032907869 XP_032763760 protein-coding 625889499 Tmem263 transmembrane protein 263 1 163325669 163343809 - 116907389 MODEL JAAIVD010000025;XM_032910345;XM_032910353;XM_032910360 XP_032766236;XP_032766244;XP_032766251 protein-coding 625889513 Mydgf myeloid derived growth factor INVOLVED IN negative regulation of apoptotic process (ortholog); positive regulation of angiogenesis (ortholog); positive regulation of endothelial cell proliferation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Keloid (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog); Golgi apparatus (ortholog) 4 87560150 87568865 - 30032202 116899174 MODEL JAAIVD010000003;XM_032900746 XP_032756637 myeloid-derived growth factor protein-coding 625889523 LOC116899924 U1 spliceosomal RNA 4 82030949 82031112 + 116899924 MODEL JAAIVD010000003;XR_004387894 snrna 625889526 LOC116893288 histone-lysine N-methyltransferase SETD7-like 2 148600777 148601944 + 116893288 MODEL JAAIVD010000001 pseudo 625889527 Add3 adducin 3 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein kinase C binding (ortholog); structural constituent of cytoskeleton (ortholog); INVOLVED IN positive regulation of cytoskeleton organization (ortholog); positive regulation of vasoconstriction (ortholog); response to xenobiotic stimulus (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); brain ischemia (ortholog); cerebral palsy (ortholog); FOUND IN brush border (ortholog); cell cortex (ortholog); cell-cell junction (ortholog) 2 52648779 52680078 + 30032202 116891282 MODEL JAAIVD010000001;XM_032892186 XP_032748077 gamma-adducin protein-coding 625889545 Sema3d semaphorin 3D ASSOCIATED WITH childhood-onset asthma (ortholog); Hirschsprung's disease (ortholog); sensorineural hearing loss (ortholog) 6 143079794 143271014 + 30032202 116904152 MODEL JAAIVD010000024;XM_032907050 XP_032762941 semaphorin-3D protein-coding 625889567 LOC116887792 small nucleolar RNA SNORA48 18 36869036 36869181 - 116887792 MODEL JAAIVD010000013;XR_004386287 snorna 625889570 LOC116894037 olfactory receptor 52E8-like 2 102371315 102372328 - 22301074 116894037 MODEL JAAIVD010000001;XM_032895756 XP_032751647 protein-coding 625889573 Myo5b myosin VB ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ionotropic glutamate receptor binding (ortholog); small GTPase binding (ortholog); INVOLVED IN cellular response to glycine (ortholog); dendritic spine morphogenesis (ortholog); endosomal transport (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; vasopressin signaling pathway; vasopressin signaling pathway via receptor type 2; ASSOCIATED WITH amphetamine abuse (ortholog); Crohn's disease (ortholog); diarrhea (ortholog); FOUND IN apical cortex (ortholog); brush border (ortholog); dendritic spine (ortholog) 15 57226779 57524577 - 22301074;30032202 116884270 MODEL JAAIVD010000010;XM_032885354 XP_032741245 unconventional myosin-Vb protein-coding 625889617 Il4i1 interleukin 4 induced 1 ENCODES a protein that exhibits L-amino-acid oxidase activity (ortholog); INVOLVED IN aromatic amino acid metabolic process (ortholog); L-phenylalanine catabolic process (ortholog); L-tryptophan catabolic process (ortholog); PARTICIPATES IN Canavan disease pathway; glycine N-methyltransferase deficiency pathway; homocystinuria pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Inflammation (ortholog); FOUND IN acrosomal vesicle (ortholog); extracellular region (ortholog); immunological synapse (ortholog) 2 154702291 154707032 - 30032202 116892189 MODEL JAAIVD010000001;XM_032893715 XP_032749606 L-amino-acid oxidase protein-coding 625889628 Ghsr growth hormone secretagogue receptor ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); growth hormone secretagogue receptor activity (ortholog); growth hormone-releasing hormone receptor activity (ortholog); INVOLVED IN actin polymerization or depolymerization (ortholog); adult feeding behavior (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; ghrelin system pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Cardiac Fibrosis (ortholog); Digestive System Neoplasms (ortholog); FOUND IN cell surface (ortholog); glutamatergic synapse (ortholog); membrane raft (ortholog) 3 127326738 127330900 - 22301074;30032202 116896989 MODEL JAAIVD010000012;XM_032898583 XP_032754474 growth hormone secretagogue receptor type 1 protein-coding 625889634 Psph phosphoserine phosphatase ENCODES a protein that exhibits identical protein binding (ortholog); L-phosphoserine phosphatase activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); L-serine biosynthetic process (ortholog); L-serine metabolic process (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; nonketotic hyperglycinemia pathway; ASSOCIATED WITH amelogenesis imperfecta (ortholog); amino acid metabolic disorder (ortholog); epilepsy (ortholog); FOUND IN cytosol (ortholog) 16 24184351 24206619 + 22301074;30032202 116885234 MODEL JAAIVD010000004;XM_032886472 XP_032742363 protein-coding 625889646 LOC116904484 pleiotropic regulator 1-like 6 145375184 145392682 - 116904484 MODEL JAAIVD010000024 pseudo 625889647 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 56585415 56585486 - 116910784 MODEL JAAIVD010000002 trna 625889648 LOC116907149 high mobility group protein B1-like 8 65113008 65113594 - 116907149 MODEL JAAIVD010000027 pseudo 625889649 LOC116906373 U1 spliceosomal RNA 7 68076550 68076713 + 116906373 MODEL JAAIVD010000026;XR_004388642 snrna 625889652 Lcn6 lipocalin 6 INVOLVED IN acrosome reaction (ortholog); calcium ion homeostasis (ortholog); cell maturation (ortholog) 5 11510662 11516302 - 30032202 116900096 MODEL JAAIVD010000023;XM_032901874 XP_032757765 epididymal-specific lipocalin-6 protein-coding 625889663 Zc3h18 zinc finger CCCH-type containing 18 ENCODES a protein that exhibits mRNA cap binding complex binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN RNA destabilization (ortholog); FOUND IN nuclear speck (ortholog); protein-containing complex (ortholog); ribonucleoprotein complex (ortholog) 17 42012036 42056524 + 22301074 116886145 MODEL JAAIVD010000011;XM_032887499;XM_032887500;XM_032887501;XM_032887502 XP_032743390;XP_032743391;XP_032743392;XP_032743393 zinc finger CCCH domain-containing protein 18 protein-coding 625889695 Atcay ATCAY kinesin light chain interacting caytaxin ENCODES a protein that exhibits kinesin binding (ortholog); INVOLVED IN mitochondrion distribution (ortholog); negative regulation of L-glutamine biosynthetic process (ortholog); neuron projection development (ortholog); ASSOCIATED WITH Ataxia (ortholog); Cayman type cerebellar ataxia (ortholog); cerebellar ataxia (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendrite (ortholog) 1 153660161 153684617 + 30032202 116904520 MODEL JAAIVD010000025;XM_032907307 XP_032763198 caytaxin protein-coding 625889712 LOC116913407 uncharacterized LOC116913407 12 78897442 78898563 + 116913407 MODEL JAAIVD010000007;XR_004389613 ncrna 625889716 Fut4 fucosyltransferase 4 ENCODES a protein that exhibits 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase activity (ortholog); alpha-(1->3)-fucosyltransferase activity (ortholog); INVOLVED IN glycosphingolipid biosynthetic process (ortholog); Lewis x epitope biosynthetic process (ortholog); lymphocyte migration into lymph node (ortholog); ASSOCIATED WITH thrombosis (ortholog); FOUND IN cell periphery (ortholog); cell surface (ortholog); trans-Golgi network (ortholog) 8 10535940 10539938 - 22301074;30032202 116907480 MODEL JAAIVD010000027;XM_032910466 XP_032766357 alpha-(1,3)-fucosyltransferase 4 protein-coding 625889721 LOC116901620 low-density lipoprotein receptor-related protein 4 5 65644181 65664716 + 30032202 116901620 MODEL JAAIVD010000023;XM_032903671 XP_032759562 protein-coding 625889742 Acot12 acyl-CoA thioesterase 12 ENCODES a protein that exhibits acetyl-CoA hydrolase activity (ortholog); ATP binding (ortholog); identical protein binding (ortholog); INVOLVED IN acetyl-CoA metabolic process (ortholog); acyl-CoA metabolic process (ortholog); PARTICIPATES IN Leigh disease pathway; primary hyperoxaluria type 2 pathway; pyruvate decarboxylase deficiency pathway; ASSOCIATED WITH liver cancer (ortholog); FOUND IN cytosol (ortholog) 3 204443653 204482717 - 22301074;30032202 116895693 MODEL JAAIVD010000012;XM_032896895 XP_032752786 acetyl-coenzyme A thioesterase protein-coding 625889761 LOC116892237 zinc finger protein 260-like 2 156181381 156185334 + 30032202 116892237 MODEL JAAIVD010000001;XM_032893809 XP_032749700 protein-coding 625889767 Czib CXXC motif containing zinc binding protein ENCODES a protein that exhibits zinc ion binding (ortholog); ASSOCIATED WITH carnitine palmitoyltransferase II deficiency (ortholog) 1 46933812 46943166 - 30032202 116899206 MODEL JAAIVD010000025;XM_032900798;XM_032900807;XM_032900815 XP_032756689;XP_032756698;XP_032756706 protein-coding 625889785 Vhl von Hippel-Lindau tumor suppressor ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); enzyme binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN amyloid fibril formation (ortholog); angiogenesis (ortholog); blood vessel endothelial cell migration (ortholog); PARTICIPATES IN altered hypoxia inducible factor pathway; hypoxia inducible factor pathway; proteasome degradation pathway involving cullin-dependent ubiquitin ligases; ASSOCIATED WITH adenoma (ortholog); Au-Kline Syndrome (ortholog); carcinoma (ortholog); FOUND IN cilium (ortholog); Cul2-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) 6 32905242 32913452 - 116903402 MODEL JAAIVD010000024;XM_032905913 XP_032761804 von Hippel-Lindau disease tumor suppressor protein-coding 625889792 Dnal1 dynein axonemal light chain 1 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); dynein heavy chain binding (ortholog); INVOLVED IN outer dynein arm assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); Kartagener syndrome (ortholog); primary ciliary dyskinesia (ortholog) 7 98210630 98226716 + 30032202 116906156 MODEL JAAIVD010000026;XM_032909137 XP_032765028 dynein light chain 1, axonemal protein-coding 625889802 Ano9 anoctamin 9 ENCODES a protein that exhibits calcium channel activity (ortholog); channel activity (ortholog); chloride channel inhibitor activity (ortholog); INVOLVED IN calcium activated galactosylceramide scrambling (ortholog); calcium activated phosphatidylcholine scrambling (ortholog); calcium activated phosphatidylserine scrambling (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); plasma membrane (ortholog) 2 8352852 8373109 + 30032202 116890887 MODEL JAAIVD010000001;XM_032891500 XP_032747391 anoctamin-9 protein-coding 625889828 Tmem236 transmembrane protein 236 14 9404995 9454205 - 116883810 MODEL JAAIVD010000009;XM_032885058 XP_032740949 protein-coding 625889836 LOC116912268 40S ribosomal protein S2-like 11 37307027 37307901 + 116912268 MODEL JAAIVD010000006 pseudo 625889837 Sox7 SRY-box transcription factor 7 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN endoderm formation (ortholog); negative regulation of DNA-templated transcription (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH congenital diaphragmatic hernia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 12 60456490 60463434 - 30032202 116913508 MODEL JAAIVD010000007;XM_032917712 XP_032773603 transcription factor SOX-7 protein-coding 625889843 LOC116895620 non-POU domain-containing octamer-binding protein-like 3 170884538 170886062 - 116895620 MODEL JAAIVD010000012 pseudo 625889844 Haus5 HAUS augmin like complex subunit 5 INVOLVED IN centrosome cycle (ortholog); spindle assembly (ortholog); FOUND IN centrosome (ortholog); HAUS complex (ortholog); mitotic spindle microtubule (ortholog) 2 165341173 165351553 + 22301074;30032202 116892304 MODEL JAAIVD010000001;XM_032893922 XP_032749813 HAUS augmin-like complex subunit 5 protein-coding 625889868 Ctsw cathepsin W 2 2205591 2208994 + 30032202 116890715 MODEL JAAIVD010000001;XM_032891162 XP_032747053 protein-coding 625889882 Pura purine rich element binding protein A ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN dendritic transport of messenger ribonucleoprotein complex (ortholog); epithelial cell proliferation (ortholog); lymphocyte proliferation (ortholog); ASSOCIATED WITH Apnea (ortholog); autosomal dominant intellectual developmental disorder 31 (ortholog); Developmental Disabilities (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) 15 8087571 8093690 - 22301074;30032202 116884760 MODEL JAAIVD010000010;XM_032885978 XP_032741869 transcriptional activator protein Pur-alpha protein-coding 625889888 LOC116889331 SMR1 protein-like X 122748776 122752620 - 30032202 116889331 MODEL JAAIVD010000014;XM_032890449 XP_032746340 protein-coding 625889893 CYTB cytochrome b ENCODES a protein that exhibits electron transfer activity (inferred); metal ion binding (inferred); oxidoreductase activity (inferred); INVOLVED IN electron transport chain (inferred); mitochondrial electron transport, ubiquinol to cytochrome c (inferred); proton transmembrane transport (inferred); FOUND IN membrane (inferred); mitochondrial inner membrane (inferred); respiratory chain complex III (inferred) MT 14127 15269 + 7751810 A0A089ZWW6;A0A089ZWX7;A0A089ZWY0;A0A090A0Z8;A0A090A1P8;A0A090BD62;A0A090BD87;A0A0A1IRT6;A0A0A1ISC6;A0A0A1ITP3;A0A0A1ITX1;A0A0U4VT54;A0A0U4VT59;A0A0U5AMD8;A0A0U5BQ16;A0A1B4ZBC4;A0A1S6PXI3;A0A1S6PXI4;A0A1S6PXI9;A0A1S6PXJ0;A0A1S6PXJ1;A0A1S6PXJ3;A0A1S6PXJ4;A0A1S6PXJ5;A0A1S6PXJ7;A0A1S6PXJ8;A0A1S6PXJ9;A0A1S6PXK3;A0A1S6PXK5;A0A1S6PXK6;A0A1S6PXK8;A0A1S6PXK9;A0A1S6PXL5;A0A1S6PXL8;A0A1S6PXL9;A0A1S6PXM0;A0A1S6PXM1;A0A1S6PXM9;A0A1Z1MZA3;A0A1Z1MZA4;A0A1Z1MZA7;A0A1Z1MZB4;A0A1Z1MZB8;A0A1Z1MZE0;A0A1Z1MZE1;A0A1Z1MZE6;A0A3G1CIM3;A0A3G1CIR6;A0A3G1CIV6;A0A3G1CIW0;A0A3G1CIW6;A0A3G1CIX0;A0A3G1CIX2;A0A3G1CIX5;A0A3G1CIX6;A0A3G1CIX7;A0A3G1CIX8;A0A3G1CIY0;A0A3G1CJ03;A0A3G1CJ17;A0A3G1CJ24;A0A3G2LU45;A0A3Q9WX51;A0A3S5XFH6;A0A3S5XFJ7;A0A3T0ZJ98;A0A3T0ZJJ1;A0A3T0ZJL5;A0A411AR48;A0A411DEY0;A0A411DEY7;A0A514CBM4;A0A514CBP5;A0A5C1DA78;A0A5C1DA85;A0A5C1DAA7;A0A5C1DAC4;A0A5C1DAH2;A0A5C1DBS0;A0A5C1DC01;A0A5C1DCS5;A0A678TMC5;A0A6B7HPY7;A0A7L4W4P1;A0A862QMJ8;A0A862QMK6;A0A862QMN5;A0A862QQT8;A0A862RB17;A0A862RB46;A0A8A5GN30;A0A8A5GNM0;A4UI00;E0A013;E0A014;F2Q6R8;F2Q6R9;F8QXB2;F8QXB4;F8QXB5;F8QXB9;F8QXC2;G8HZ54;G8HZ62;G8HZ63;G8HZ64;G8HZ66;G8HZ71;G8HZ72;G8HZ81;G8HZ83;G8HZ86;G9CIR8;G9CIS2;G9CIS3;G9CIS7;H8Y1J5;I0AW70;I0AW82;I0AWF4;I0AWM5;I0AWM6;I6Q840;K7T8A0;K7T8C1;K7T8H1;K7T8K8;K7TC56;K7TC66;K7TC88;K7TCB0;K7TCB3;K7TCB7;K7TCC1;K7TFV4;K7TFW9;K7TFX2;K7TFX7;K7TG19;K7TG23;K7TG28;K7TG56;K7TG62;K7TQ08;K7TQ12;K7TQ23;K7TQ37;K7TQ70;K7TQ89;K7TQC1;K7TQC5;K7U4J1;K7U4K5;K7U4L1;K7U4V6;L0AS56;L0L327;L0L4S8;L0P155;L0P158;L0P160;L0P1I1;L0P1W7;L0P356;L7R8V1;L7R8W1;N0DL84;N0DL94;N0DNQ0;N0DNR0;N0DQK9;Q3LG78;Q5VI46;Q9TDS3 REVIEWED EU273707 ABX45243;YP_002791028 protein-coding 625889894 Tph1 tryptophan hydroxylase 1 ENCODES a protein that exhibits tryptophan 5-monooxygenase activity (ortholog); INVOLVED IN bone remodeling (ortholog); circadian rhythm (ortholog); mammary gland alveolus development (ortholog); PARTICIPATES IN tryptophan metabolic pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Alzheimer's disease (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN cytoplasm (ortholog) 2 152706211 152727400 + 22301074;30032202 116892104 MODEL JAAIVD010000001;XM_032893581 XP_032749472 tryptophan 5-hydroxylase 1 protein-coding 625889910 Trnat-cgu transfer RNA threonine (anticodon CGU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 5 152979584 152979655 + 116902679 MODEL JAAIVD010000023 trna 625889911 LOC116900360 olfactory receptor 5W2-like 5 69347477 69348418 - 22301074;30032202 116900360 MODEL JAAIVD010000023;XM_032902112 XP_032758003 protein-coding 625889915 Nr2c1 nuclear receptor subfamily 2 group C member 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); histone deacetylase binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of retinoic acid receptor signaling pathway (ortholog); ASSOCIATED WITH Contracture (ortholog); endometriosis (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); PML body (ortholog) 1 173300421 173354698 + 22301074;30032202 116908304 MODEL JAAIVD010000025;XM_032911586 XP_032767477 protein-coding 625889933 LOC116896769 60S ribosomal protein L23-like 3 74735014 74735484 - 1840488;22301074;30032202 116896769 MODEL JAAIVD010000012;X58200;XM_032898227 CAA41177;XP_032754118 ribosomal protein L23 protein-coding 625889938 Stx12 syntaxin 12 INVOLVED IN autophagosome assembly (ortholog); cholesterol efflux (ortholog); endocytic recycling (ortholog); FOUND IN BLOC-1 complex (ortholog); glutamatergic synapse (ortholog); Golgi apparatus (ortholog) 1 25356734 25385847 + 22301074;30032202 116895368 MODEL JAAIVD010000025;XM_032896668 XP_032752559 syntaxin-12 protein-coding 625889951 Eed embryonic ectoderm development ENCODES a protein that exhibits chromatin binding (ortholog); enzyme activator activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); facultative heterochromatin formation (ortholog); gene expression (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Cohen-Gibson Syndrome (ortholog); genetic disease (ortholog); FOUND IN chromatin silencing complex (ortholog); ESC/E(Z) complex (ortholog); nucleoplasm (ortholog) 2 111194445 111221784 + 22301074;30032202 116891857 MODEL JAAIVD010000001;XM_032893250;XM_032893251 XP_032749141;XP_032749142 polycomb protein EED protein-coding 625889972 LOC116909248 uncharacterized LOC116909248 9 74089424 74096921 - 116909248 MODEL JAAIVD010000002;XR_004389062 ncrna 625889977 LOC116890348 U6 spliceosomal RNA 1 102316885 102316985 + 116890348 MODEL JAAIVD010000025 pseudo 625889978 Gmds GDP-mannose 4,6-dehydratase ENCODES a protein that exhibits GDP-mannose 4,6-dehydratase activity (ortholog); identical protein binding (ortholog); NADP+ binding (ortholog); INVOLVED IN 'de novo' GDP-L-fucose biosynthetic process (ortholog); GDP-mannose metabolic process (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructosuria pathway; hereditary fructose intolerance syndrome pathway; ASSOCIATED WITH open-angle glaucoma (ortholog); FOUND IN cytosol (ortholog) 14 50852374 51374688 - 22301074;30032202 116884023 MODEL JAAIVD010000009;XM_032885259 XP_032741150 GDP-mannose 4,6 dehydratase protein-coding 625889993 Plekhj1 pleckstrin homology domain containing J1 1 154086644 154089105 + 30032202 116904877 MODEL JAAIVD010000025;XM_032907478;XM_032907486;XM_032907492;XM_032907501 XP_032763369;XP_032763377;XP_032763383;XP_032763392 pleckstrin homology domain-containing family J member 1 protein-coding 625890014 Alg14 ALG14 UDP-N-acetylglucosaminyltransferase subunit ENCODES a protein that exhibits protein-membrane adaptor activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 15 (ortholog); congenital myopathy (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); UDP-N-acetylglucosamine transferase complex (ortholog) 3 38518390 38590933 - 22301074;30032202 116896311 MODEL JAAIVD010000012;XM_032897399 XP_032753290 UDP-N-acetylglucosamine transferase subunit ALG14 homolog protein-coding 625890022 Slc15a5 solute carrier family 15 member 5 6 11383677 11472699 + 22301074 116904530 MODEL JAAIVD010000024;XM_032907323 XP_032763214 protein-coding 625890034 Kti12 KTI12 chromatin associated homolog 1 45998795 46005820 - 116899048 MODEL JAAIVD010000025;XM_032900520 XP_032756411 protein KTI12 homolog protein-coding 625890041 Htra2 HtrA serine peptidase 2 ENCODES a protein that exhibits identical protein binding (ortholog); peptidase activity (ortholog); protein serine/threonine kinase inhibitor activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); adult walking behavior (ortholog); cellular response to growth factor stimulus (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH 3-methylglutaconic aciduria type 8 (ortholog); Alzheimer's disease (ortholog); asphyxia neonatorum (ortholog); FOUND IN CD40 receptor complex (ortholog); chromatin (ortholog); cytoplasmic side of plasma membrane (ortholog) 6 63170554 63173711 + 22301074;30032202 116903634 MODEL JAAIVD010000024;XM_032906297 XP_032762188 serine protease HTRA2, mitochondrial protein-coding 625890053 LOC116913797 proteasome activator complex subunit 2-like 12 76823842 76824603 - 116913797 MODEL JAAIVD010000007 pseudo 625890054 Rcor2 REST corepressor 2 ENCODES a protein that exhibits enzyme binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) 2 517692 523967 - 30032202 116894798 MODEL JAAIVD010000001;XM_032896458 XP_032752349 protein-coding 625890070 LOC116914967 40S ribosomal protein SA-like 13 18211023 18216246 - 116914967 MODEL JAAIVD010000008 pseudo 625890071 Bnc1 basonuclin zinc finger protein 1 ENCODES a protein that exhibits DNA-binding transcription activator activity (ortholog); rDNA binding (ortholog); INVOLVED IN chromosome organization (ortholog); positive regulation of epithelial cell proliferation (ortholog); positive regulation of oocyte maturation (ortholog); ASSOCIATED WITH 46 XX gonadal dysgenesis (ortholog); primary ovarian insufficiency (ortholog); primary ovarian insufficiency 16 (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 2 118279383 118304956 + 30032202 116894265 MODEL JAAIVD010000001;XM_032895970;XM_032895971 XP_032751861;XP_032751862 basonuclin 1;zinc finger protein basonuclin-1 protein-coding 625890083 LOC116890890 interferon-induced transmembrane protein 2-like 2 8461684 8463898 + 30032202 116890890 MODEL JAAIVD010000001;XM_032891504;XM_032891505 XP_032747395;XP_032747396 protein-coding 625890093 Hacd2 3-hydroxyacyl-CoA dehydratase 2 ENCODES a protein that exhibits 3-hydroxyacyl-CoA dehydratase activity (ortholog); enzyme binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN fatty acid elongation (ortholog); sphingolipid biosynthetic process (ortholog); very long-chain fatty acid biosynthetic process (ortholog); FOUND IN endoplasmic reticulum (ortholog) 4 19796150 19887224 + 30032202 116898804 MODEL JAAIVD010000003;XM_032900155 XP_032756046 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 protein-coding 625890104 LOC116889611 40S ribosomal protein SA-like Y 83165 84114 + 116889611 MODEL JAAIVD010000015;XR_004386504 pseudo 625890107 LOC116904661 U7 small nuclear RNA 6 7746289 7746351 + 116904661 MODEL JAAIVD010000024;XR_004388361 snrna 625890110 Atp1b4 ATPase Na+/K+ transporting family member beta 4 INVOLVED IN regulation of DNA-templated transcription (ortholog); transmembrane transport (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; FOUND IN chromatin (ortholog); nuclear envelope (ortholog); nuclear inner membrane (ortholog) X 101639052 101659471 + 22301074;30032202 116888763 MODEL JAAIVD010000014;XM_032890055;XM_032890056 XP_032745946;XP_032745947 protein ATP1B4 protein-coding 625890124 Mucl3 mucin like 3 ASSOCIATED WITH Diffuse Panbronchiolitis (ortholog) 18 8854578 8862436 - 116887460 MODEL JAAIVD010000013;XM_032889067 XP_032744958 mucin-like protein 3 protein-coding 625890129 LOC116910061 protein Wfdc21 9 86928520 86934210 - 22301074 116910061 MODEL JAAIVD010000002;XM_032913872 XP_032769763 protein-coding 625890136 LOC116913168 tRNA wybutosine-synthesizing protein 5-like 12 50889787 50894072 - 116913168 MODEL JAAIVD010000007 pseudo 625890137 Snx5 sorting nexin 5 ENCODES a protein that exhibits D1 dopamine receptor binding (ortholog); dynactin binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN endosome membrane tubulation (ortholog); epidermal growth factor catabolic process (ortholog); negative regulation of blood pressure (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN brush border (ortholog); cytoplasmic side of early endosome membrane (ortholog); cytoplasmic side of plasma membrane (ortholog) 5 123896652 123915966 - 22301074;30032202 116902040 MODEL JAAIVD010000023;XM_032904323 XP_032760214 sorting nexin-5 protein-coding 625890155 LOC116911818 small nucleolar RNA SNORA48 10 63061815 63061959 + 116911818 MODEL JAAIVD010000005;XR_004389356 snorna 625890158 LOC116911012 zinc finger protein 883-like 1 215596900 215616232 + 30032202 116911012 MODEL JAAIVD010000025;XM_032914745;XM_032914753;XM_032914759 XP_032770636;XP_032770644;XP_032770650 zinc finger protein 431-like protein-coding 625890172 LOC116904679 small nucleolar RNA SNORA36 family 6 13837916 13838044 - 116904679 MODEL JAAIVD010000024;XR_004388377 snorna 625890175 Adcyap1r1 ADCYAP receptor type I ENCODES a protein that exhibits adenylate cyclase binding (ortholog); pituitary adenylate cyclase-activating polypeptide receptor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cAMP biosynthetic process (ortholog); cAMP metabolic process (ortholog); ASSOCIATED WITH asthma (ortholog); cystitis (ortholog); Reperfusion Injury (ortholog); FOUND IN bicellular tight junction (ortholog); caveola (ortholog); cell surface (ortholog) 6 85550567 85623751 - 22301074;30032202 116903754 MODEL JAAIVD010000024;XM_032906442;XM_032906443;XM_032906444;XM_032906445 XP_032762333;XP_032762334;XP_032762335;XP_032762336 pituitary adenylate cyclase-activating polypeptide type I receptor protein-coding 625890207 Dcdc2c doublecortin domain containing 2C ASSOCIATED WITH methylmalonic aciduria and homocystinuria type cblC (ortholog); FOUND IN cytoplasm (ortholog); sperm end piece (ortholog); sperm flagellum (ortholog) 7 41953874 41993516 - 22301074;30032202 116905703 MODEL JAAIVD010000026;XM_032908678;XM_032908679 XP_032764569;XP_032764570 doublecortin domain-containing protein 2C protein-coding 625890221 LOC116910728 small nucleolar RNA SNORA26 9 89795008 89795103 + 116910728 MODEL JAAIVD010000002 pseudo 625890222 LOC116900052 uncharacterized LOC116900052 5 4479009 4480802 + 116900052 MODEL JAAIVD010000023;XR_004387911 ncrna 625890226 Best4 bestrophin 4 ENCODES a protein that exhibits bicarbonate channel activity (ortholog); chloride channel activity (ortholog); intracellularly calcium-gated chloride channel activity (ortholog) 1 40770461 40774322 + 22301074 116886657 MODEL JAAIVD010000025;XM_032888460 XP_032744351 bestrophin-4 protein-coding 625890237 C1qtnf7 C1q and TNF related 7 ENCODES a protein that exhibits identical protein binding (ortholog); FOUND IN extracellular region (ortholog) 11 62148944 62248895 - 22301074 116912672 MODEL JAAIVD010000006;XM_032916789 XP_032772680 complement C1q tumor necrosis factor-related protein 7 protein-coding 625890244 LOC116911360 60S ribosomal protein L9-like 10 84661594 84662176 - 22301074;30032202 116911360 MODEL JAAIVD010000005;XM_032915284 XP_032771175 protein-coding 625890248 LOC116900262 olfactory receptor 5M10-like 5 63202851 63203786 + 22301074;30032202 116900262 MODEL JAAIVD010000023;XM_032902014 XP_032757905 protein-coding 625890251 LOC116903914 protein arginine N-methyltransferase 9 1 146344661 146355039 + 116903914 MODEL JAAIVD010000025;XM_032906683 XP_032762574 protein-coding 625890258 LOC116902255 uncharacterized LOC116902255 5 141900005 141905244 + 116902255 MODEL JAAIVD010000023;XR_004388059 ncrna 625890262 Ccdc174 coiled-coil domain containing 174 ASSOCIATED WITH Infantile Hypotonia with Psychomotor Retardation (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 6 55041723 55061998 - 30032202 116903495 MODEL JAAIVD010000024;XM_032906084;XM_032906086 XP_032761975;XP_032761977 coiled-coil domain-containing protein 174 protein-coding 625890279 Trnaw-cca transfer RNA tryptophan (anticodon CCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42521654 42521725 + 116884234 MODEL JAAIVD010000009 trna 625890280 Sfxn5 sideroflexin 5 ENCODES a protein that exhibits citrate transmembrane transporter activity (ortholog); INVOLVED IN citrate transport (ortholog); positive regulation of cold-induced thermogenesis (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 6 60869459 60989690 + 22301074;30032202 116903577 MODEL JAAIVD010000024;XM_032906200;XM_032906201 XP_032762091;XP_032762092 sideroflexin-5 protein-coding 625890301 LOC116892085 zinc finger protein 120-like 2 151811400 151839890 + 30032202 116892085 MODEL JAAIVD010000001;XM_032893559 XP_032749450 protein-coding 625890309 LOC116885558 reticulocalbin-1-like 1 159751320 159753314 - 116885558 MODEL JAAIVD010000025 pseudo 625890310 Znf354b zinc finger protein 354B ENCODES a protein that exhibits transcription corepressor activity (ortholog) 9 33570126 33579888 - 22301074 116908810 MODEL JAAIVD010000002;XM_032912216 XP_032768107 protein-coding 625890318 Sgpp1 sphingosine-1-phosphate phosphatase 1 ENCODES a protein that exhibits sphingosine-1-phosphate phosphatase activity (ortholog); INVOLVED IN ER to Golgi ceramide transport (ortholog); extrinsic apoptotic signaling pathway (ortholog); intrinsic apoptotic signaling pathway (ortholog); PARTICIPATES IN sphingosine 1-phosphate signaling pathway; FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog); nucleoplasm (ortholog) 7 89870140 89889969 - 30032202 116905175 MODEL JAAIVD010000026;XM_032907952 XP_032763843 protein-coding 625890325 LOC116908064 solute carrier family 22 member 13 8 110439190 110450364 - 22301074 116908064 MODEL JAAIVD010000027;XM_032911333 XP_032767224 protein-coding 625890338 LOC116887793 small nucleolar RNA SNORA48 18 26522041 26522181 + 116887793 MODEL JAAIVD010000013;XR_004386288 snorna 625890341 LOC116890822 uncharacterized LOC116890822 2 5157033 5193305 - 116890822 MODEL JAAIVD010000001;XM_032891326 XP_032747217 uncharacterized protein LOC116890822 protein-coding 625890357 Slc38a9 solute carrier family 38 member 9 ENCODES a protein that exhibits amino acid transmembrane transporter activity (ortholog); cholesterol binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN amino acid transmembrane transport (ortholog); asparagine transport (ortholog); cellular response to amino acid stimulus (ortholog); ASSOCIATED WITH Liver Neoplasms (ortholog); FOUND IN FNIP-folliculin RagC/D GAP (ortholog); late endosome (ortholog); lysosomal membrane (ortholog) 3 184051742 184124156 - 30032202 116897188 MODEL JAAIVD010000012;XM_032898883 XP_032754774 sodium-coupled neutral amino acid transporter 9 protein-coding 625890376 Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase ENCODES a protein that exhibits enzyme activator activity (ortholog); enzyme binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); actin filament organization (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN actin cytoskeleton (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) 10 35908381 35988609 + 22301074;30032202 116911104 MODEL JAAIVD010000005;XM_032914937;XM_032914938;XM_032914939;XM_032914941;XM_032914942;XM_032914943;XM_032914944;XM_032914945;XM_032914946 XP_032770828;XP_032770829;XP_032770830;XP_032770832;XP_032770833;XP_032770834;XP_032770835;XP_032770836;XP_032770837 tyrosine-protein kinase ABL2 protein-coding 625890408 Csn2 casein beta ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN lactation (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN extracellular region (ortholog) 11 1209952 1217161 + 22301074;30032202 116912649 MODEL JAAIVD010000006;XM_032916767 XP_032772658 beta-casein protein-coding 625890421 LOC116913800 granzyme-like protein 1 12 68699834 68798164 + 22301074;30032202 116913800 MODEL JAAIVD010000007;XM_032918106 XP_032773997 protein-coding 625890430 LOC116908513 uncharacterized LOC116908513 9 90949728 90954716 + 116908513 MODEL JAAIVD010000002;XR_004388989 ncrna 625890435 LOC116883269 AP-3 complex subunit sigma-1-like 14 80844903 80845460 - 116883269 MODEL JAAIVD010000009 pseudo 625890436 Slc38a6 solute carrier family 38 member 6 ENCODES a protein that exhibits L-glutamate transmembrane transporter activity (ortholog); L-glutamine transmembrane transporter activity (ortholog); FOUND IN plasma membrane (ortholog) 7 87540920 87602617 + 30032202 116905158 MODEL JAAIVD010000026;XM_032907930;XM_032907932;XM_032907933 XP_032763821;XP_032763823;XP_032763824 probable sodium-coupled neutral amino acid transporter 6 protein-coding 625890462 LOC116912474 MICOS complex subunit Mic26-like 11 76526715 76527312 + 116912474 MODEL JAAIVD010000006 pseudo 625890463 Fam13c family with sequence similarity 13 member C ASSOCIATED WITH prostate cancer (ortholog) 18 16319949 16433897 - 116887525 MODEL JAAIVD010000013;XM_032889150;XM_032889151;XM_032889152 XP_032745041;XP_032745042;XP_032745043 protein FAM13C protein-coding 625890487 Zc3h8 zinc finger CCCH-type containing 8 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of T cell differentiation in thymus (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN Cajal body (ortholog); euchromatin (ortholog); histone locus body (ortholog) 5 107718438 107733705 - 22301074;30032202 116901951 MODEL JAAIVD010000023;XM_032904185 XP_032760076 zinc finger CCCH domain-containing protein 8 protein-coding 625890500 Taf13 TATA-box binding protein associated factor 13 ENCODES a protein that exhibits DNA binding (ortholog); TBP-class protein binding (ortholog); INVOLVED IN mRNA transcription by RNA polymerase II (ortholog); positive regulation of transcription initiation by RNA polymerase II (ortholog); RNA polymerase II preinitiation complex assembly (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH autosomal recessive intellectual developmental disorder 60 (ortholog); autosomal recessive primary microcephaly (ortholog); genetic disease (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 3 49683355 49693448 - 22301074;30032202 116895776 MODEL JAAIVD010000012;XM_032896927 XP_032752818 transcription initiation factor TFIID subunit 13 protein-coding 625890507 Ptpn21 protein tyrosine phosphatase non-receptor type 21 ENCODES a protein that exhibits protein tyrosine phosphatase activity (ortholog); ASSOCIATED WITH myoepithelioma (ortholog); prostate cancer (ortholog) 7 111838958 111895961 - 22301074;30032202 116905346 MODEL JAAIVD010000026;XM_032908246 XP_032764137 tyrosine-protein phosphatase non-receptor type 21 protein-coding 625890530 LOC116901274 uncharacterized LOC116901274 5 10731090 10736299 - 116901274 MODEL JAAIVD010000023;XR_004387971 ncrna 625890535 Zswim5 zinc finger SWIM-type containing 5 ASSOCIATED WITH Breast Neoplasms (ortholog) 1 40512214 40620261 + 22301074;30032202 116898532 MODEL JAAIVD010000025;XM_032899755 XP_032755646 zinc finger SWIM domain-containing protein 5 protein-coding 625890553 LOC116885437 phosphoglycerate mutase 1-like 1 68652551 68692680 + 116885437 MODEL JAAIVD010000025 pseudo 625890554 Samd4b sterile alpha motif domain containing 4B ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN cerebellar neuron development (ortholog); FOUND IN cytosol (ortholog) 2 167559422 167597916 + 22301074;30032202 116892391 MODEL JAAIVD010000001;XM_032894063 XP_032749954 protein Smaug homolog 2 protein-coding 625890571 Brpf1 bromodomain and PHD finger containing 1 ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); histone H4K12 acetyltransferase activity (ortholog); histone H4K5 acetyltransferase activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); common myeloid progenitor cell proliferation (ortholog); neural tube formation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Developmental Disabilities (ortholog); Developmental Disease (ortholog); FOUND IN cytoplasm (ortholog); histone acetyltransferase complex (ortholog); MOZ/MORF histone acetyltransferase complex (ortholog) 6 33210599 33226609 - 22301074;30032202 116903421 MODEL JAAIVD010000024;XM_032905949;XM_032905950;XM_032905951;XM_032905952 XP_032761840;XP_032761841;XP_032761842;XP_032761843 peregrin protein-coding 625890594 LOC116908444 small nucleolar RNA U3 8 5395607 5395713 - 116908444 MODEL JAAIVD010000027 pseudo 625890595 LOC116898387 EEF1A lysine methyltransferase 4-like 4 73421264 73422026 - 116898387 MODEL JAAIVD010000003 pseudo 625890596 LOC116893779 lipase member M 2 33712901 33731624 + 22301074 116893779 MODEL JAAIVD010000001;XM_032895482 XP_032751373 protein-coding 625890609 LOC116884633 desmocollin-3 15 23523726 23557439 + 22301074;30032202 116884633 MODEL JAAIVD010000010;XM_032885773 XP_032741664 protein-coding 625890628 Tm2d3 TM2 domain containing 3 INVOLVED IN lateral inhibition (ortholog); Notch receptor processing, ligand-independent (ortholog); positive regulation of Notch signaling pathway (ortholog); FOUND IN cytoplasmic vesicle (ortholog); plasma membrane (ortholog) 2 134648738 134660910 - 116892001 MODEL JAAIVD010000001;XM_032893457;XM_032893458;XM_032893459 XP_032749348;XP_032749349;XP_032749350 TM2 domain-containing protein 3 protein-coding 625890646 LOC116907215 heterogeneous nuclear ribonucleoprotein L-like 8 7641308 7657500 + 116907215 MODEL JAAIVD010000027 pseudo 625890647 LOC116907326 40S ribosomal protein S16-like 8 82138484 82138995 + 22301074;30032202 116907326 MODEL JAAIVD010000027;XM_032910271;XM_032910272 XP_032766162;XP_032766163 protein-coding 625890655 Lrrc42 leucine rich repeat containing 42 FOUND IN nucleoplasm (ortholog) 1 47556962 47578570 + 22301074 116899270 MODEL JAAIVD010000025;XM_032900897;XM_032900906 XP_032756788;XP_032756797 leucine-rich repeat-containing protein 42 protein-coding 625890670 Spmip5 sperm microtubule inner protein 5 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH substance-related disorder (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); sperm flagellum (ortholog) 2 57323427 57329000 + 116893836 MODEL JAAIVD010000001;XM_032895552 XP_032751443 C2H10orf82 chromosome 2 C10orf82 homolog;sperm associated microtubule inner protein 5;uncharacterized protein C10orf82 homolog protein-coding 625890677 LOC116904358 multifunctional protein ADE2-like 6 80026902 80027583 - 116904358 MODEL JAAIVD010000024 pseudo 625890678 Angptl1 angiopoietin like 1 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); FOUND IN extracellular region (ortholog) 10 36194659 36208210 + 30032202 116911603 MODEL JAAIVD010000005;XM_032915579 XP_032771470 angiopoietin-related protein 1 protein-coding 625890685 LOC116889810 transmembrane protein 35A-like 116889810 MODEL JAAIVD010000897 pseudo 625890686 Cramp1 cramped chromatin regulator 1 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); FOUND IN histone locus body (ortholog) 9 2243707 2289623 - 30032202 116908692 MODEL JAAIVD010000002;XM_032912009;XM_032912010 XP_032767900;XP_032767901 cramped chromatin regulator homolog 1;protein cramped-like protein-coding 625890716 LOC116906884 olfactory receptor 8B12 8 72769874 72770806 + 22301074;30032202 116906884 MODEL JAAIVD010000027;XM_032909798 XP_032765689 protein-coding 625890719 LOC116904713 small nucleolar RNA SNORA17 6 16958184 16958315 + 116904713 MODEL JAAIVD010000024;XR_004388407 snorna 625890722 LOC116888003 angiomotin-like protein 2 X 76178756 76318262 - 116888003 MODEL JAAIVD010000014 pseudo 625890723 Srbd1 S1 RNA binding domain 1 7 6829834 7004812 + 22301074;30032202 116905765 MODEL JAAIVD010000026;XM_032908732 XP_032764623 S1 RNA-binding domain-containing protein 1 protein-coding 625890748 Gas2 growth arrest specific 2 INVOLVED IN antral ovarian follicle growth (ortholog); basement membrane organization (ortholog); initiation of primordial ovarian follicle growth (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); autosomal recessive nonsyndromic deafness 125 (ortholog); Salivary Gland Neoplasms (ortholog) 2 148651421 148763744 - 22301074;30032202 116892063 MODEL JAAIVD010000001;XM_032893529;XM_032893530;XM_032893531;XM_032893533;XM_032893534 XP_032749420;XP_032749421;XP_032749422;XP_032749424;XP_032749425 growth arrest-specific protein 2 protein-coding 625890773 Tent4a terminal nucleotidyltransferase 4A ENCODES a protein that exhibits guanylyltransferase activity (ortholog); INVOLVED IN negative regulation of nuclear-transcribed mRNA poly(A) tail shortening (ortholog); positive regulation of 3'-UTR-mediated mRNA stabilization (ortholog); response to xenobiotic stimulus (ortholog); PARTICIPATES IN nucleotide excision repair pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 2 200912976 200946439 - 30032202 116892905 MODEL JAAIVD010000001;XM_032894824;XM_032894825 XP_032750715;XP_032750716 protein-coding 625890791 Fgr FGR proto-oncogene, Src family tyrosine kinase ENCODES a protein that exhibits Fc-gamma receptor I complex binding (ortholog); immunoglobulin receptor binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); INVOLVED IN bone mineralization (ortholog); defense response to Gram-positive bacterium (ortholog); integrin-mediated signaling pathway (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; glypican signaling pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoskeleton (ortholog); plasma membrane (ortholog) 1 25234016 25250897 - 22301074;30032202 116895348 MODEL JAAIVD010000025;XM_032896652 XP_032752543 tyrosine-protein kinase Fgr protein-coding 625890808 Samsn1 SAM domain, SH3 domain and nuclear localization signals 1 ENCODES a protein that exhibits phosphotyrosine residue binding (ortholog); INVOLVED IN negative regulation of adaptive immune response (ortholog); negative regulation of B cell activation (ortholog); negative regulation of peptidyl-tyrosine phosphorylation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 4 66078891 66129642 + 22301074 116899050 MODEL JAAIVD010000003;XM_032900522 XP_032756413 SAM domain-containing protein SAMSN-1 protein-coding 625890820 Tceanc transcription elongation factor A N-terminal and central domain containing X 30641566 30646192 - 22301074;30032202 116889148 MODEL JAAIVD010000014;XM_032890316 XP_032746207 transcription elongation factor A N-terminal and central domain-containing protein protein-coding 625890827 Plpp6 phospholipid phosphatase 6 ENCODES a protein that exhibits hydrolase activity (ortholog); isoprenoid diphosphate phosphatase activity (ortholog); lipid phosphatase activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); farnesyl diphosphate catabolic process (ortholog); geranyl diphosphate metabolic process (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); nuclear membrane (ortholog) 2 29025292 29028302 + 30032202 116891065 MODEL JAAIVD010000001;XM_032891771 XP_032747662 protein-coding 625890832 Sertad2 SERTA domain containing 2 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); positive regulation of DNA-templated transcription (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 11 88805021 88888719 + 30032202 116912142 MODEL JAAIVD010000006;XM_032916055;XM_032916056 XP_032771946;XP_032771947 SERTA domain-containing protein 2 protein-coding 625890841 Terb1 telomere repeat binding bouquet formation protein 1 INVOLVED IN double-strand break repair involved in meiotic recombination (ortholog); homologous chromosome pairing at meiosis (ortholog); meiotic attachment of telomere to nuclear envelope (ortholog); ASSOCIATED WITH azoospermia (ortholog); spermatogenic failure 3 (ortholog); spermatogenic failure 60 (ortholog); FOUND IN chromosome, telomeric region (ortholog); nuclear envelope (ortholog); nuclear inner membrane (ortholog) 17 12727139 12780665 - 30032202 116886477 MODEL JAAIVD010000011;XM_032887981 XP_032743872 telomere repeats-binding bouquet formation protein 1 protein-coding 625890863 Il23r interleukin 23 receptor ENCODES a protein that exhibits cytokine receptor activity (ortholog); interleukin-12 receptor binding (ortholog); interleukin-23 binding (ortholog); INVOLVED IN interleukin-23-mediated signaling pathway (ortholog); negative regulation of interleukin-10 production (ortholog); positive regulation of defense response to virus by host (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; ASSOCIATED WITH arthritis (ortholog); asthma (ortholog); Behcet's disease (ortholog); FOUND IN cell surface (ortholog); interleukin-23 receptor complex (ortholog); plasma membrane (ortholog) 6 76970947 77058358 - 22301074;30032202 116904354 MODEL JAAIVD010000024;XM_032907244 XP_032763135 interleukin-23 receptor protein-coding 625890877 LOC116907092 putative gustatory receptor clone PTE01 8 16561963 16572592 + 22301074;30032202 116907092 MODEL JAAIVD010000027;XM_032910056;XM_032910058 XP_032765947;XP_032765949 olfactory receptor 18 protein-coding 625890885 LOC116885339 uncharacterized LOC116885339 16 7057029 7058750 - 116885339 MODEL JAAIVD010000004;XR_004386003 ncrna 625890890 Commd9 COMM domain containing 9 INVOLVED IN cholesterol homeostasis (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN nucleoplasm (ortholog); protein-containing complex (ortholog) 5 79725627 79740278 + 116901674 MODEL JAAIVD010000023;XM_032903789 XP_032759680 COMM domain-containing protein 9 protein-coding 625890900 Ccdc68 coiled-coil domain containing 68 INVOLVED IN intracellular protein localization (ortholog); microtubule anchoring at centrosome (ortholog); ASSOCIATED WITH Habitual Abortions (ortholog); FOUND IN centriolar subdistal appendage (ortholog); centriole (ortholog) 15 61298152 61325717 - 30032202 116884618 MODEL JAAIVD010000010;XM_032885759 XP_032741650 coiled-coil domain-containing protein 68 protein-coding 625890915 Jade2 jade family PHD finger 2 ENCODES a protein that exhibits histone H3K14 acetyltransferase activity (ortholog); histone H4K12 acetyltransferase activity (ortholog); histone H4K16 acetyltransferase activity (ortholog); INVOLVED IN neuron projection extension (ortholog); positive regulation of neurogenesis (ortholog); protein autoubiquitination (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN histone acetyltransferase complex (ortholog); nucleoplasm (ortholog) 9 34405731 34449753 - 30032202 116909563 MODEL JAAIVD010000002;XM_032913181;XM_032913182 XP_032769072;XP_032769073 E3 ubiquitin-protein ligase Jade-2 protein-coding 625890936 LOC116906098 multifunctional protein ADE2-like 7 73447016 73448453 - 116906098 MODEL JAAIVD010000026 pseudo 625890937 Rbks ribokinase ENCODES a protein that exhibits identical protein binding (ortholog); ribokinase activity (ortholog); INVOLVED IN pentose-phosphate shunt (ortholog); PARTICIPATES IN pentose phosphate pathway; ribose 5-phosphate isomerase deficiency pathway; transaldolase deficiency pathway; FOUND IN cytoplasm (ortholog) 7 22463522 22540326 + 22301074 116905964 MODEL JAAIVD010000026;XM_032908969 XP_032764860 protein-coding 625890949 LOC116896347 28S ribosomal protein S17, mitochondrial-like 3 48879526 48880540 - 116896347 MODEL JAAIVD010000012 pseudo 625890950 LOC116890605 small nucleolar RNA SNORA26 1 156617946 156618061 + 116890605 MODEL JAAIVD010000025;XR_004386756 snorna 625890953 LOC116887082 uncharacterized LOC116887082 18 45972963 45978093 + 116887082 MODEL JAAIVD010000013;XR_004386199 ncrna 625890957 LOC116890321 U6 spliceosomal RNA 1 3927539 3927645 + 116890321 MODEL JAAIVD010000025;XR_004386544 snrna 625890960 Prm2 protamine 2 ENCODES a protein that exhibits cadmium ion binding (ortholog); zinc ion binding (ortholog); INVOLVED IN nucleus organization (ortholog); spermatid development (ortholog); spermatogenesis (ortholog); FOUND IN nucleus (ortholog) 9 11562235 11563994 + 22301074;30032202 116910582 MODEL JAAIVD010000002;XM_032914504 XP_032770395 protamine-2 protein-coding 625890966 F2rl1 F2R like trypsin receptor 1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); G-protein alpha-subunit binding (ortholog); G-protein beta-subunit binding (ortholog); INVOLVED IN antimicrobial humoral response (ortholog); cell-cell junction maintenance (ortholog); defense response to virus (ortholog); PARTICIPATES IN protease mediated signaling via protease-activated receptor 2; ASSOCIATED WITH asthma (ortholog); chronic obstructive pulmonary disease (ortholog); Experimental Arthritis (ortholog); FOUND IN early endosome (ortholog); plasma membrane (ortholog); pseudopodium (ortholog) 3 222689461 222702301 + 22301074;30032202 116897371 MODEL JAAIVD010000012;XM_032899128 XP_032755019 proteinase-activated receptor 2 protein-coding 625890972 LOC116899798 U7 small nuclear RNA 4 9189545 9189611 - 116899798 MODEL JAAIVD010000003 pseudo 625890973 Unc5b unc-5 netrin receptor B ENCODES a protein that exhibits netrin receptor activity (ortholog); INVOLVED IN anterior/posterior axon guidance (ortholog); axon guidance (ortholog); negative regulation of extrinsic apoptotic signaling pathway in absence of ligand (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Subarachnoid Hemorrhage (ortholog); FOUND IN membrane raft (ortholog) 18 26584938 26651239 - 22301074;30032202 116886913 MODEL JAAIVD010000013;XM_032888383;XM_032888384 XP_032744274;XP_032744275 netrin receptor UNC5B protein-coding 625890997 Samd5 sterile alpha motif domain containing 5 FOUND IN cytoplasm (ortholog) 2 227414071 227824210 + 22301074 116893028 MODEL JAAIVD010000001;XM_032894989;XM_032894990 XP_032750880;XP_032750881 sterile alpha motif domain-containing protein 5 protein-coding 625891008 LOC116906402 small nucleolar RNA SNORD113/SNORD114 family 7 127247655 127247728 + 116906402 MODEL JAAIVD010000026;XR_004388668 snorna 625891011 LOC116899018 keratin-associated protein 13-1-like 4 55135608 55136418 + 116899018 MODEL JAAIVD010000003;XM_032900467 XP_032756358 protein-coding 625891016 LOC116912582 40S ribosomal protein S3-like 11 6122101 6122761 - 116912582 MODEL JAAIVD010000006 pseudo 625891017 LOC116886889 antizyme inhibitor 2-like 1 27934341 27945691 + 30032202 116886889 MODEL JAAIVD010000025;XM_032888350 XP_032744241 protein-coding 625891028 LOC116891631 ubiquitin-like protein FUBI 2 87109927 87110356 + 22301074;30032202 116891631 MODEL JAAIVD010000001;XM_032892844 XP_032748735 protein-coding 625891033 Klk13 kallikrein related peptidase 13 ENCODES a protein that exhibits endopeptidase activity (ortholog); hydrolase activity (ortholog); INVOLVED IN protein processing (ortholog); ASSOCIATED WITH ovarian carcinoma (ortholog); prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); secretory granule (ortholog) 2 155670123 155681697 - 22301074 116894360 MODEL JAAIVD010000001;XM_032896061 XP_032751952 kallikrein-13 protein-coding 625891043 Vsir V-set immunoregulatory receptor ENCODES a protein that exhibits endopeptidase activator activity (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN BMP signaling pathway (ortholog); negative regulation of CD4-positive, alpha-beta T cell proliferation (ortholog); negative regulation of CD8-positive, alpha-beta T cell proliferation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) 18 26167079 26189183 + 30032202 116886927 MODEL JAAIVD010000013;XM_032888408;XM_032888409 XP_032744299;XP_032744300 V-type immunoglobulin domain-containing suppressor of T-cell activation protein-coding 625891056 LOC116883482 uncharacterized LOC116883482 14 25825635 25826549 + 116883482 MODEL JAAIVD010000009;XR_004385763 ncrna 625891060 LOC116900097 epididymal-specific lipocalin-5 5 11522031 11525469 - 30032202 116900097 MODEL JAAIVD010000023;XM_032901876 XP_032757767 protein-coding 625891068 LOC116892707 leukocyte immunoglobulin-like receptor subfamily B member 3 2 178519402 178526184 + 116892707 MODEL JAAIVD010000001 pseudo 625891069 Yme1l1 YME1 like 1 ATPase ENCODES a protein that exhibits ATP-dependent peptidase activity (ortholog); INVOLVED IN cell population proliferation (ortholog); cellular response to starvation (ortholog); mitochondrial protein catabolic process (ortholog); ASSOCIATED WITH 3-methylglutaconic aciduria (ortholog); dilated cardiomyopathy (ortholog); fundus dystrophy (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 14 1403011 1438729 - 22301074;30032202 116915209 MODEL JAAIVD010000009;XM_032919579;XM_032919580 XP_032775470;XP_032775471 ATP-dependent zinc metalloprotease YME1L1 protein-coding 625891095 Ms4a3 membrane spanning 4-domains A3 FOUND IN cytoplasm (ortholog) 2 11215606 11225330 + 22301074 116893656 MODEL JAAIVD010000001;XM_032895373 XP_032751264 membrane-spanning 4-domains subfamily A member 3 protein-coding 625891103 Cxcl10 C-X-C motif chemokine ligand 10 ENCODES a protein that exhibits chemoattractant activity (ortholog); chemokine activity (ortholog); CXCR3 chemokine receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cellular response to heat (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); Acute-On-Chronic Liver Failure (ortholog); adult respiratory distress syndrome (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog) 11 5197749 5200080 - 22301074;30032202 116912480 MODEL JAAIVD010000006;XM_032916545 XP_032772436 C-X-C motif chemokine 10 protein-coding 625891111 Fxyd6 FXYD domain containing ion transport regulator 6 ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN glutamatergic synapse (ortholog); plasma membrane (ortholog); postsynaptic membrane (ortholog) 8 39903175 39930087 + 22301074;30032202 116907320 MODEL JAAIVD010000027;XM_032910265;XM_032910266 XP_032766156;XP_032766157 FXYD domain-containing ion transport regulator 6 protein-coding 625891127 P2rx2 purinergic receptor P2X 2 ENCODES a protein that exhibits ATP binding (ortholog); cadmium ion binding (ortholog); cobalt ion binding (ortholog); INVOLVED IN behavioral response to pain (ortholog); chemical synaptic transmission (ortholog); detection of hypoxic conditions in blood by carotid body chemoreceptor signaling (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness (ortholog); autosomal dominant nonsyndromic deafness 41 (ortholog); epilepsy (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); dendritic spine (ortholog) 16 44018537 44021763 + 22301074;30032202 116885782 MODEL JAAIVD010000004;XM_032887110;XM_032887111;XM_032887113;XM_032887114;XM_032887115 XP_032743001;XP_032743002;XP_032743004;XP_032743005;XP_032743006 P2X purinoceptor 2 protein-coding 625891152 LOC116885562 paired immunoglobulin-like type 2 receptor beta 16 16175797 16181448 - 30032202 116885562 MODEL JAAIVD010000004;XM_032886855 XP_032742746 protein-coding 625891160 LOC116891119 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 2 34999502 35203861 - 22301074;30032202 116891119 MODEL JAAIVD010000001;XM_032891834 XP_032747725 protein-coding 625891197 LOC116906694 uncharacterized LOC116906694 8 45596119 45598135 - 116906694 MODEL JAAIVD010000027;XR_004388763 ncrna 625891202 Mefv MEFV innate immunity regulator, pyrin ENCODES a protein that exhibits actin binding (ortholog); identical protein binding (ortholog); INVOLVED IN inflammatory response (ortholog); negative regulation of cytokine production involved in inflammatory response (ortholog); negative regulation of inflammatory response (ortholog); ASSOCIATED WITH acne (ortholog); acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN cytoplasm (ortholog); microtubule associated complex (ortholog); nucleus (ortholog) 9 38530676 38540806 + 22301074 116909686 MODEL JAAIVD010000002;XM_032913346;XM_032913347 XP_032769237;XP_032769238 MEFV innate immuity regulator, pyrin;pyrin protein-coding 625891220 Apoa4 apolipoprotein A4 ENCODES a protein that exhibits antioxidant activity (ortholog); cholesterol transfer activity (ortholog); copper ion binding (ortholog); INVOLVED IN cholesterol efflux (ortholog); cholesterol homeostasis (ortholog); cholesterol metabolic process (ortholog); PARTICIPATES IN altered lipoprotein metabolic pathway; lipoprotein metabolic pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); anemia (ortholog); atherosclerosis (ortholog); FOUND IN cell surface (ortholog); chylomicron (ortholog); extracellular region (ortholog) 8 40760793 40763289 + 22301074;30032202 116906804 MODEL JAAIVD010000027;XM_032909678 XP_032765569 apolipoprotein A-IV protein-coding 625891227 LOC116903199 C-type lectin domain family 2 member D2-like 6 18795692 18803442 + 30032202 116903199 MODEL JAAIVD010000024;XM_032905576 XP_032761467 protein-coding 625891235 LOC116913203 60S ribosomal protein L35a-like 12 67168751 67169118 - 116913203 MODEL JAAIVD010000007 pseudo 625891236 LOC116908226 proteasome subunit alpha type-3-like 8 77899502 77900178 - 116908226 MODEL JAAIVD010000027 pseudo 625891237 Bmerb1 bMERB domain containing 1 INVOLVED IN negative regulation of cell motility involved in cerebral cortex radial glia guided migration (ortholog); negative regulation of microtubule depolymerization (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Familial Thoracic Aortic Aneurysm 4 (ortholog); FOUND IN microtubule cytoskeleton (ortholog) 9 8839602 8963241 - 30032202 116910219 MODEL JAAIVD010000002;XM_032914108 XP_032769999 bMERB domain-containing protein 1 protein-coding 625891247 LOC116903887 small ubiquitin-related modifier 1-like 6 24696498 24696791 - 116903887 MODEL JAAIVD010000024 pseudo 625891248 LOC116906412 small nucleolar RNA SNORD45 7 84565489 84565559 - 116906412 MODEL JAAIVD010000026;XR_004388674 snorna 625891251 Lypd5 LY6/PLAUR domain containing 5 2 170363339 170368396 - 30032202 116894492 MODEL JAAIVD010000001;XM_032896201 XP_032752092 ly6/PLAUR domain-containing protein 5 protein-coding 625891258 Clba1 clathrin binding box of aftiphilin containing 1 7 130406424 130413381 + 30032202 116905521 MODEL JAAIVD010000026;XM_032908543 XP_032764434 uncharacterized protein CLBA1 protein-coding 625891267 LOC116898821 coiled-coil domain-containing protein 58 4 21048888 21066148 + 22301074;30032202 116898821 MODEL JAAIVD010000003;XM_032900173 XP_032756064 protein-coding 625891275 Pstk phosphoseryl-tRNA kinase ENCODES a protein that exhibits L-seryl-tRNA(Sec) kinase activity (ortholog); tRNA binding (ortholog); INVOLVED IN selenocysteine incorporation (ortholog) 2 70458199 70468662 - 30032202 116891405 MODEL JAAIVD010000001;XM_032892432 XP_032748323 L-seryl-tRNA(Sec) kinase protein-coding 625891285 Slc71a1 solute carrier family 71 member 1 INVOLVED IN acrosome assembly (ortholog); sperm mitochondrion organization (ortholog); spermatid development (ortholog); FOUND IN Golgi membrane (ortholog) 3 43063302 43093991 + 22301074 116896330 MODEL JAAIVD010000012;XM_032897428 XP_032753319 Mfsd14a hippocampus abundant transcript 1 protein;major facilitator superfamily domain containing 14A protein-coding 625891301 LOC116900118 olfactory receptor 50-like 5 14179662 14180591 + 22301074;30032202 116900118 MODEL JAAIVD010000023;XM_032901894 XP_032757785 protein-coding 625891304 Zglp1 zinc finger GATA like protein 1 ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); oocyte development (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleus (ortholog) 8 17325122 17330171 - 22301074;30032202 116907467 MODEL JAAIVD010000027;XM_032910452 XP_032766343 GATA-type zinc finger protein 1 protein-coding 625891313 Krit1 KRIT1 ankyrin repeat containing ENCODES a protein that exhibits microtubule binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN cell redox homeostasis (ortholog); integrin activation (ortholog); negative regulation of angiogenesis (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH Angiokeratoma Corporis Diffusum with Arteriovenous Fistulas (ortholog); cavernous hemangioma (ortholog); Cavernous Malformations of CNS and Retina (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) 6 136092373 136125581 + 22301074;30032202 116904121 MODEL JAAIVD010000024;XM_032907006 XP_032762897 krev interaction trapped protein 1 protein-coding 625891334 LOC116896012 glyceraldehyde-3-phosphate dehydrogenase-like 3 176236102 176237078 - 116896012 MODEL JAAIVD010000012 pseudo 625891335 Nub1 negative regulator of ubiquitin like proteins 1 INVOLVED IN positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); proteasomal protein catabolic process (ortholog); protein ubiquitination (ortholog); FOUND IN Lewy body (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 6 153891414 153921488 + 22301074;30032202 116904215 MODEL JAAIVD010000024;XM_032907146 XP_032763037 NEDD8 ultimate buster 1 protein-coding 625891354 Was WASP actin nucleation promoting factor ENCODES a protein that exhibits identical protein binding (ortholog); phospholipase binding (ortholog); protein kinase binding (ortholog); INVOLVED IN actin filament polymerization (ortholog); actin filament-based movement (ortholog); actin polymerization or depolymerization (ortholog); ASSOCIATED WITH Cytomegalovirus Infections (ortholog); genetic disease (ortholog); hemorrhagic disease (ortholog); FOUND IN actin filament (ortholog); cell-cell junction (ortholog); cytosol (ortholog) X 15485317 15493832 - 22301074;30032202 116888596 MODEL JAAIVD010000014;XM_032889895 XP_032745786 wiskott-Aldrich syndrome protein protein-coding 625891370 LOC116895604 eukaryotic translation initiation factor 5A-1-like 3 157224351 157224878 - 116895604 MODEL JAAIVD010000012 pseudo 625891371 Etv6 ETS variant transcription factor 6 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cell differentiation (ortholog); hematopoietic stem cell proliferation (ortholog); mesenchymal cell apoptotic process (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); B-lymphoblastic leukemia/lymphoma (ortholog) 6 15177337 15411906 - 22301074;30032202 116903177 MODEL JAAIVD010000024;XM_032905548;XM_032905549 XP_032761439;XP_032761440 transcription factor ETV6 protein-coding 625891386 Vps26b VPS26, retromer complex component B INVOLVED IN cellular response to type II interferon (ortholog); regulation of neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); retrograde transport, endosome to Golgi (ortholog); PARTICIPATES IN retromer-mediated pathway; FOUND IN early endosome (ortholog); glutamatergic synapse (ortholog); late endosome (ortholog) 8 22902804 22923726 - 22301074;30032202 116908036 MODEL JAAIVD010000027;XM_032911308 XP_032767199 vacuolar protein sorting-associated protein 26B protein-coding 625891396 Rpl23a ribosomal protein L23a ENCODES a protein that exhibits large ribosomal subunit rRNA binding (ortholog); structural constituent of ribosome (ortholog); TORC2 complex binding (ortholog); INVOLVED IN cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Parkinson's disease (ortholog); FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog) 9 92255274 92258098 + 22301074;30032202;8428950 116909412 MODEL JAAIVD010000002;X65228;XM_032912977 CAA46336;XP_032768868 60S ribosomal protein L23a protein-coding 625891405 LOC116893893 thymosin beta-4-like 2 74074335 74074927 + 22301074;30032202 116893893 MODEL JAAIVD010000001;XM_032895612 XP_032751503 protein-coding 625891410 LOC116887639 DNA-directed RNA polymerase III subunit RPC4-like 18 12652889 12707735 - 116887639 MODEL JAAIVD010000013 pseudo 625891411 Gpr61 G protein-coupled receptor 61 ENCODES a protein that exhibits arrestin family protein binding (ortholog); INVOLVED IN ligand-independent adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); FOUND IN endosome (ortholog); plasma membrane (ortholog); signaling receptor complex (ortholog) 3 50103727 50110433 + 22301074;30032202 116896370 MODEL JAAIVD010000012;XM_032897490;XR_004387334;XR_004387335 XP_032753381 G-protein coupled receptor 61 protein-coding 625891422 LOC116900174 olfactory receptor 1Q1-like 5 14632522 14633448 + 22301074;30032202 116900174 MODEL JAAIVD010000023;XM_032901930 XP_032757821 protein-coding 625891425 LOC116887886 tubulin beta-6 chain-like X 49939915 49952271 - 116887886 MODEL JAAIVD010000014 pseudo 625891426 Med4 mediator complex subunit 4 ENCODES a protein that exhibits nuclear thyroid hormone receptor binding (ortholog); transcription coactivator activity (ortholog); transcription coregulator activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription initiation by RNA polymerase II (ortholog); transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH cervical cancer (ortholog); endometriosis (ortholog); FOUND IN mediator complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 12 50859752 50870035 - 22301074;30032202 116913728 MODEL JAAIVD010000007;XM_032918033 XP_032773924 mediator of RNA polymerase II transcription subunit 4 protein-coding 625891437 LOC116904395 denticleless protein homolog 6 98500155 98501282 + 116904395 MODEL JAAIVD010000024 pseudo 625891438 Fut9 fucosyltransferase 9 ENCODES a protein that exhibits 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase activity (ortholog); alpha-(1->3)-fucosyltransferase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN glycoprotein biosynthetic process (ortholog); glycosphingolipid biosynthetic process (ortholog); Lewis x epitope biosynthetic process (ortholog); FOUND IN Golgi apparatus (ortholog); trans-Golgi network (ortholog); trans-Golgi network membrane (ortholog) 1 116852581 116853930 + 22301074;30032202 116902456 MODEL JAAIVD010000025;XM_032905024 XP_032760915 alpha-(1,3)-fucosyltransferase 9 protein-coding 625891443 LOC116885831 small nuclear ribonucleoprotein E-like 16 30912663 30913164 - 116885831 MODEL JAAIVD010000004 pseudo 625891444 Hmgxb3 HMG-box containing 3 15 70767549 70814593 + 116884974 MODEL JAAIVD010000010;XM_032886195 XP_032742086 HMG domain-containing protein 3 protein-coding 625891468 Stk11ip serine/threonine kinase 11 interacting protein ENCODES a protein that exhibits protein kinase binding (ortholog); protein sequestering activity (ortholog); INVOLVED IN intracellular protein localization (ortholog); FOUND IN cytoplasm (ortholog) 4 148874698 148890124 + 30032202 116899540 MODEL JAAIVD010000003;XM_032901421;XM_032901422;XM_032901424;XM_032901425;XM_032901426;XM_032901427;XM_032901428 XP_032757312;XP_032757313;XP_032757315;XP_032757316;XP_032757317;XP_032757318;XP_032757319 serine/threonine-protein kinase 11-interacting protein protein-coding 625891512 LOC116903752 uncharacterized LOC116903752 6 56619262 56633598 + 116903752 MODEL JAAIVD010000024;XR_004388294 ncrna 625891516 Ildr1 immunoglobulin like domain containing receptor 1 ENCODES a protein that exhibits high-density lipoprotein particle receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); epithelial structure maintenance (ortholog); positive regulation of peptide hormone secretion (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 42 (ortholog); Deafness (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog); protein-containing complex (ortholog) 4 21552332 21585165 + 30032202 116898825 MODEL JAAIVD010000003;XM_032900177 XP_032756068 immunoglobulin-like domain-containing receptor 1 protein-coding 625891528 LOC116892053 probable 18S rRNA (guanine-N(7))-methyltransferase 2 143771776 143772694 - 116892053 MODEL JAAIVD010000001 pseudo 625891529 LOC116899901 small nucleolar RNA SNORA17 4 98219439 98219572 - 116899901 MODEL JAAIVD010000003;XR_004387874 snorna 625891532 Rabac1 Rab acceptor 1 ENCODES a protein that exhibits GTPase binding (ortholog); identical protein binding (ortholog); proline-rich region binding (ortholog); FOUND IN glutamatergic synapse (ortholog); Golgi apparatus (ortholog); membrane (ortholog) 2 169733629 169736528 + 30032202 116892474 A0A8A1UD59 MODEL JAAIVD010000001;XM_032894199 XP_032750090 prenylated Rab acceptor protein 1 protein-coding 625891541 LOC116912812 vomeronasal type-1 receptor 4-like 11 96576764 96577977 + 22301074;30032202 116912812 MODEL JAAIVD010000006;XM_032916980 XP_032772871 protein-coding 625891545 Pfn2 profilin 2 ENCODES a protein that exhibits actin binding (ortholog); actin monomer binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); modification of postsynaptic actin cytoskeleton (ortholog); modulation of chemical synaptic transmission (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog); presynapse (ortholog) 3 96423136 96428983 - 22301074;30032202 116896849 MODEL JAAIVD010000012;XM_032898354 XP_032754245 profilin-2 protein-coding 625891552 LOC116911837 small nucleolar RNA SNORA17 10 88030543 88030673 - 116911837 MODEL JAAIVD010000005;XR_004389371 snorna 625891555 LOC116894432 60S ribosomal protein L13a-like 2 160301265 160301832 + 116894432 MODEL JAAIVD010000001 pseudo 625891556 Il18r1 interleukin 18 receptor 1 ENCODES a protein that exhibits interleukin-18 binding (ortholog); interleukin-18 receptor activity (ortholog); INVOLVED IN interleukin-18-mediated signaling pathway (ortholog); natural killer cell activation (ortholog); negative regulation of cold-induced thermogenesis (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH aortic dissection (ortholog); asthma (ortholog); autoimmune disease (ortholog); FOUND IN interleukin-18 receptor complex (ortholog) 4 116700504 116732965 + 30032202 116899326 MODEL JAAIVD010000003;XM_032901016 XP_032756907 interleukin-18 receptor 1 protein-coding 625891572 LOC116912935 U7 small nuclear RNA 11 73908860 73908922 + 116912935 MODEL JAAIVD010000006;XR_004389505 snrna 625891575 Dqx1 DEAQ-box RNA dependent ATPase 1 ASSOCIATED WITH fetal akinesia deformation sequence syndrome 1 (ortholog) 6 63157935 63167322 - 30032202 116903633 MODEL JAAIVD010000024;XM_032906293;XM_032906294;XM_032906295 XP_032762184;XP_032762185;XP_032762186 ATP-dependent RNA helicase DQX1 protein-coding 625891595 Mix23 mitochondrial matrix import factor 23 FOUND IN mitochondrion (ortholog) 4 20842277 20861622 + 22301074;30032202 116898818 MODEL JAAIVD010000003;XM_032900172 XP_032756063 Ccdc58 coiled-coil domain containing 58;coiled-coil domain-containing protein 58 protein-coding 625891604 Zmynd11 zinc finger MYND-type containing 11 ENCODES a protein that exhibits double-stranded DNA binding (ortholog); histone H3K36me3 reader activity (ortholog); transcription corepressor activity (ortholog); INVOLVED IN defense response to virus (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of extrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal dominant intellectual developmental disorder 1 (ortholog); autosomal dominant intellectual developmental disorder 30 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 14 23354008 23442400 - 22301074;30032202 116883745 MODEL JAAIVD010000009;XM_032884981;XM_032884982;XM_032884983;XM_032884984;XM_032884985;XM_032884986;XM_032884987;XM_032884988;XM_032884989;XM_032884990 XP_032740872;XP_032740873;XP_032740874;XP_032740875;XP_032740876;XP_032740877;XP_032740878;XP_032740879;XP_032740880;XP_032740881 zinc finger MYND domain-containing protein 11 protein-coding 625891648 Fam174c family with sequence similarity 174 member C FOUND IN cytoplasm (ortholog); extracellular region (ortholog) 1 154701437 154703414 - 30032202 116905308 MODEL JAAIVD010000025;XM_032908195 XP_032764086 protein FAM174C protein-coding 625891655 LOC116893734 periodic tryptophan protein 1 homolog 2 16330550 16332037 - 116893734 MODEL JAAIVD010000001 pseudo 625891656 LOC116896005 non-POU domain-containing octamer-binding protein-like 3 172223905 172225330 - 116896005 MODEL JAAIVD010000012 pseudo 625891657 Rab11b RAB11B, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN amyloid-beta clearance by transcytosis (ortholog); cellular response to acidic pH (ortholog); constitutive secretory pathway (ortholog); ASSOCIATED WITH genetic disease (ortholog); human immunodeficiency virus infectious disease (ortholog); Neurodevelopmental Disorder with Ataxic Gait, Absent Speech, and Decreased Cortical White Matter (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); phagocytic vesicle (ortholog) 1 158664061 158677155 + 22301074;30032202 116907037 MODEL JAAIVD010000025;XM_032909987 XP_032765878 ras-related protein Rab-11B protein-coding 625891666 LOC116912123 uncharacterized protein C11orf98 homolog 11 75497935 75498469 - 116912123 MODEL JAAIVD010000006 pseudo 625891667 Ttf2 transcription termination factor 2 ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); FOUND IN cytosol (ortholog) 3 57099156 57130097 + 22301074 116896464 MODEL JAAIVD010000012;XM_032897626 XP_032753517 protein-coding 625891694 Evc EvC ciliary complex subunit 1 INVOLVED IN cartilage development (ortholog); endochondral bone growth (ortholog); positive regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH Ellis-Van Creveld syndrome (ortholog); genetic disease (ortholog); nephronophthisis (ortholog); FOUND IN ciliary basal body (ortholog); ciliary membrane (ortholog); cilium (ortholog) 11 67820619 67859625 + 30032202 116912737 MODEL JAAIVD010000006;XM_032916879 XP_032772770 ellis-van Creveld syndrome protein protein-coding 625891719 Gas1 growth arrest specific 1 ENCODES a protein that exhibits oxysterol binding (ortholog); protein carrier activity (ortholog); INVOLVED IN axon guidance (ortholog); camera-type eye development (ortholog); cell fate commitment (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH holoprosencephaly (ortholog); holoprosencephaly 1 (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) 14 77944781 77947897 + 30032202 116883800 MODEL JAAIVD010000009;XM_032885046 XP_032740937 growth arrest-specific protein 1 protein-coding 625891724 LOC116897641 U2 spliceosomal RNA 3 80215190 80215369 + 116897641 MODEL JAAIVD010000012 pseudo 625891725 Psd3 pleckstrin and Sec7 domain containing 3 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); Contracture (ortholog); high grade glioma (ortholog); FOUND IN cleavage furrow (ortholog); glutamatergic synapse (ortholog); membrane (ortholog) 13 21307663 21680782 + 22301074 116914274 MODEL JAAIVD010000008;XM_032918495;XM_032918497 XP_032774386;XP_032774388 PH and SEC7 domain-containing protein 3 protein-coding 625891748 LOC116889470 small Cajal body-specific RNA 13 X 102036695 102036933 + 116889470 MODEL JAAIVD010000014;XR_004386422 ncrna 625891751 Ciao2a cytosolic iron-sulfur assembly component 2A INVOLVED IN iron-sulfur cluster assembly (ortholog); protein maturation (ortholog); PARTICIPATES IN cytosolic iron-sulfur cluster protein assembly pathway; ASSOCIATED WITH colorectal cancer (ortholog); FOUND IN cytosol (ortholog); cytosolic [4Fe-4S] assembly targeting complex (ortholog); nucleoplasm (ortholog) 8 60462052 60473124 + 116907655 MODEL JAAIVD010000027;XM_032910746 XP_032766637 protein-coding 625891760 LOC116911452 DNA damage-regulated autophagy modulator protein 2-like 10 27869167 27869966 + 116911452 MODEL JAAIVD010000005 pseudo 625891761 Eps8 EGFR pathway substrate 8, signaling adaptor ENCODES a protein that exhibits actin binding (ortholog); small GTPase binding (ortholog); INVOLVED IN actin crosslink formation (ortholog); actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 102 (ortholog); autosomal recessive nonsyndromic deafness 106 (ortholog); FOUND IN brush border (ortholog); cell cortex (ortholog); glutamatergic synapse (ortholog) 6 11895551 11959408 + 30032202 116903145 MODEL JAAIVD010000024;XM_032905509 XP_032761400 epidermal growth factor receptor kinase substrate 8;epidermal growth factor receptor pathway substrate 8 protein-coding 625891785 Prdm16 PR/SET domain 16 ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN beige fat cell differentiation (ortholog); brown fat cell differentiation (ortholog); heterochromatin organization (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH coronary artery disease (ortholog); dilated cardiomyopathy (ortholog); dilated cardiomyopathy 1LL (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); nuclear body (ortholog) 1 6353851 6401982 + 22301074;30032202 116889986 MODEL JAAIVD010000025;XM_032890777 XP_032746668 histone-lysine N-methyltransferase PRDM16 protein-coding 625891803 Tsacc TSSK6 activating cochaperone ENCODES a protein that exhibits protein-folding chaperone binding (ortholog); FOUND IN cytoplasm (ortholog) 3 65254865 65265934 + 22301074;30032202 116896696 MODEL JAAIVD010000012;XM_032898094;XM_032898096 XP_032753985;XP_032753987 TSSK6-activating co-chaperone protein protein-coding 625891815 Gramd2a GRAM domain containing 2A ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN endoplasmic reticulum-plasma membrane tethering (ortholog); regulation of store-operated calcium entry (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); organelle membrane contact site (ortholog); plasma membrane (ortholog) 8 53520400 53554839 + 30032202 116908185 MODEL JAAIVD010000027;XM_032911472 XP_032767363 GRAM domain-containing protein 2A protein-coding 625891830 Acox3 acyl-CoA oxidase 3, pristanoyl ENCODES a protein that exhibits fatty acid binding (ortholog); flavin adenine dinucleotide binding (ortholog); long-chain fatty acyl-CoA oxidase activity (ortholog); INVOLVED IN fatty acid beta-oxidation using acyl-CoA oxidase (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); FOUND IN peroxisome (ortholog) 11 69463291 69491170 - 22301074;30032202 116912307 MODEL JAAIVD010000006;XM_032916321 XP_032772212 peroxisomal acyl-coenzyme A oxidase 3 protein-coding 625891851 LOC116894301 aminoacyl tRNA synthase complex-interacting multifunctional protein 1-like 1 21723199 21724586 - 116894301 MODEL JAAIVD010000025 pseudo 625891852 LOC116889114 putative protein FAM90A26 X 113265913 113267381 - 116889114 MODEL JAAIVD010000014;XM_032890279 XP_032746170 protein-coding 625891856 LOC116904696 small nucleolar RNA SNORA48 6 74002994 74003137 - 116904696 MODEL JAAIVD010000024;XR_004388392 snorna 625891859 Trnae-uuc transfer RNA glutamic acid (anticodon UUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 140906002 140906073 - 116895148 MODEL JAAIVD010000001 trna 625891860 LOC116887732 elongation factor 1-gamma-like 1 227159162 227160502 + 116887732 MODEL JAAIVD010000025 pseudo 625891861 LOC116898446 60S ribosomal protein L27a-like 4 96293320 96340761 + 116898446 MODEL JAAIVD010000003 pseudo 625891862 LOC116889081 uncharacterized LOC116889081 X 26767770 26770091 - 116889081 MODEL JAAIVD010000014 pseudo 625891863 LOC116909619 CTP synthase 1-like 9 7608079 7609858 + 22301074;30032202 116909619 MODEL JAAIVD010000002;XM_032913246 XP_032769137 protein-coding 625891867 LOC116887902 40S ribosomal protein S24-like 1 64326696 64327146 + 116887902 MODEL JAAIVD010000025 pseudo 625891868 LOC116911218 actin, cytoplasmic 2-like 10 40649371 40650668 + 30032202 116911218 MODEL JAAIVD010000005;XM_032915110 XP_032771001 protein-coding 625891873 Pla2g4d phospholipase A2 group IVD ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); INVOLVED IN glycerophospholipid catabolic process (ortholog); FOUND IN cytoplasm (ortholog) 5 98404825 98425631 - 22301074;30032202 116900598 MODEL JAAIVD010000023;XM_032902314 XP_032758205 cytosolic phospholipase A2 delta protein-coding 625891896 LOC116887817 10 kDa heat shock protein, mitochondrial-like 1 60923826 60924134 + 22301074;30032202 116887817 MODEL JAAIVD010000025;XM_032889340 XP_032745231 protein-coding 625891899 Adgrf1 adhesion G protein-coupled receptor F1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cellular response to cAMP (ortholog); memory (ortholog); FOUND IN plasma membrane (ortholog) 4 86512461 86544871 - 22301074;30032202 116898056 MODEL JAAIVD010000003;XM_032899453 XP_032755344 adhesion G-protein coupled receptor F1 protein-coding 625891915 LOC116887847 protein NYNRIN-like X 41248498 41250381 - 22301074 116887847 MODEL JAAIVD010000014;XM_032889353 XP_032745244 protein-coding 625891919 Stat3 signal transducer and activator of transcription 3 ENCODES a protein that exhibits CCR5 chemokine receptor binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN acute-phase response (ortholog); astrocyte differentiation (ortholog); cell differentiation (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; granulocyte-macrophage colony-stimulating factor signaling pathway; Interleukin-10 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); adult T-cell leukemia/lymphoma (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 60177560 60203269 - 30032202 116908570 MODEL JAAIVD010000002;XM_032911775;XM_032911776;XM_032911777;XM_032911778 XP_032767666;XP_032767667;XP_032767668;XP_032767669 protein-coding 625891952 Alg6 ALG6 alpha-1,3-glucosyltransferase ENCODES a protein that exhibits dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity (ortholog); glucosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation Ic (ortholog); cystic kidney disease (ortholog) 1 54764933 54805814 - 30032202 116899861 MODEL JAAIVD010000025;XM_032901782 XP_032757673 dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase protein-coding 625891971 LOC116909503 keratin-associated protein 4-12-like 9 54499472 54500014 - 22301074;30032202 116909503 MODEL JAAIVD010000002;XM_032913108 XP_032768999 protein-coding 625891974 LOC116907224 lysine-specific demethylase 4D-like 8 10243491 10244873 - 30032202 116907224 MODEL JAAIVD010000027;XM_032910188 XP_032766079 protein-coding 625891977 LOC116913670 60S ribosomal protein L29-like 12 37039375 37039914 + 116913670 MODEL JAAIVD010000007 pseudo 625891978 Slc24a5 solute carrier family 24 member 5 ENCODES a protein that exhibits calcium ion transmembrane transporter activity (ortholog); calcium, potassium:sodium antiporter activity (ortholog); INVOLVED IN calcium ion import (ortholog); monoatomic ion transmembrane transport (ortholog); negative regulation of melanin biosynthetic process (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH genetic disease (ortholog); ocular albinism 1 (ortholog); oculocutaneous albinism type VI (ortholog); FOUND IN trans-Golgi network (ortholog) 5 103379389 103398899 + 22301074;30032202 116900966 MODEL JAAIVD010000023;XM_032902596 XP_032758487 sodium/potassium/calcium exchanger 5 protein-coding 625891990 KEG97_t02 tRNA-Val MT 1026 1093 + 64988236 trna 625891991 Abcb9 ATP binding cassette subfamily B member 9 ENCODES a protein that exhibits ABC-type oligopeptide transporter activity (ortholog); ABC-type peptide transporter activity (ortholog); ATP binding (ortholog); INVOLVED IN antigen processing and presentation of peptide antigen via MHC class I (ortholog); peptide metabolic process (ortholog); peptide transport (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 16 29767873 29801134 + 22301074;30032202 116885331 MODEL JAAIVD010000004;XM_032886596 XP_032742487 ATP-binding cassette sub-family B member 9 protein-coding 625892007 LOC116893930 glyceraldehyde-3-phosphate dehydrogenase-like 2 83632964 83633972 - 116893930 MODEL JAAIVD010000001 pseudo 625892008 LOC116893847 olfactory receptor 6C2-like 2 61210040 61211002 - 22301074;30032202 116893847 MODEL JAAIVD010000001;XM_032895567 XP_032751458 protein-coding 625892011 LOC116899990 complement C5-like 5 547565 568838 + 22301074 116899990 MODEL JAAIVD010000023;XM_032901800 XP_032757691 protein-coding 625892024 Mycbp2 MYC binding protein 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); identical protein binding (ortholog); small GTPase binding (ortholog); INVOLVED IN branchiomotor neuron axon guidance (ortholog); cell morphogenesis involved in neuron differentiation (ortholog); central nervous system projection neuron axonogenesis (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 26 (ortholog); colon cancer (ortholog); Developmental Disabilities (ortholog); FOUND IN axon (ortholog); microtubule cytoskeleton (ortholog); nucleoplasm (ortholog) 12 21376546 21608293 + 30032202 116914081 MODEL JAAIVD010000007;XM_032918386;XM_032918388;XM_032918389 XP_032774277;XP_032774279;XP_032774280 E3 ubiquitin-protein ligase MYCBP2 protein-coding 625892121 Slc31a1 solute carrier family 31 member 1 ENCODES a protein that exhibits copper ion binding (ortholog); copper ion transmembrane transporter activity (ortholog); identical protein binding (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to cisplatin (ortholog); copper ion import (ortholog); PARTICIPATES IN cisplatin drug pathway; cisplatin response pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Congenital Abnormalities (ortholog); Embryo Loss (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); early endosome membrane (ortholog) 1 91140609 91169756 - 22301074;30032202 116901438 MODEL JAAIVD010000025;XM_032903361;XR_004387995 XP_032759252 high affinity copper uptake protein 1 protein-coding 625892133 Mettl14 methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit ENCODES a protein that exhibits mRNA binding (ortholog); mRNA m(6)A methyltransferase activity (ortholog); S-adenosyl-L-methionine binding (ortholog); INVOLVED IN forebrain radial glial cell differentiation (ortholog); gliogenesis (ortholog); mRNA destabilization (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); cardiomyopathy (ortholog); Cardiotoxicity (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA N6-methyladenosine methyltransferase complex (ortholog) 3 36423754 36446619 + 30032202 116896290 MODEL JAAIVD010000012;XM_032897371 XP_032753262 N6-adenosine-methyltransferase non-catalytic subunit;methyltransferase 14, N6-adenosine-methyltransferase subunit;methyltransferase like 14 protein-coding 625892148 LOC116888971 60S ribosomal protein L19-like X 8602004 8611654 + 116888971 MODEL JAAIVD010000014 pseudo 625892149 LOC116893626 5-hydroxyisourate hydrolase 2 8655617 8658994 - 22301074;30032202 116893626 MODEL JAAIVD010000001;XM_032895340 XP_032751231 protein-coding 625892157 Mettl18 methyltransferase 18, RPL3 N3(tau)-histidine ENCODES a protein that exhibits heat shock protein binding (ortholog); protein-L-histidine N-tele-methyltransferase activity (ortholog); INVOLVED IN peptidyl-lysine monomethylation (ortholog); regulation of ribosome biogenesis (ortholog); regulation of rRNA processing (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleus (ortholog) 10 43221887 43224022 + 30032202 116911561 MODEL JAAIVD010000005;XM_032915551;XM_032915552 XP_032771442;XP_032771443 histidine protein methyltransferase 1 homolog;methyltransferase 18, RPL3 N3-histidine;methyltransferase like 18 protein-coding 625892165 Hnrnpr heterogeneous nuclear ribonucleoprotein R ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); INVOLVED IN circadian rhythm (ortholog); mRNA destabilization (ortholog); negative regulation of catalytic activity (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); genetic disease (ortholog); NEURODEVELOPMENTAL DISORDER WITH DYSMORPHIC FACIES AND SKELETAL AND BRAIN ABNORMALITIES (ortholog); FOUND IN axon terminus (ortholog); catalytic step 2 spliceosome (ortholog); dendrite (ortholog) 1 21891008 21923276 - 30032202 116894321 MODEL JAAIVD010000025;XM_032896019;XM_032896024;XM_032896029;XM_032896038;XM_032896046;XM_032896052 XP_032751910;XP_032751915;XP_032751920;XP_032751929;XP_032751937;XP_032751943 protein-coding 625892189 Flvcr2 FLVCR choline and putative heme transporter 2 ENCODES a protein that exhibits choline binding (ortholog); choline transmembrane transporter activity (ortholog); ethanolamine transmembrane transporter activity (ortholog); INVOLVED IN brain development (ortholog); choline transport (ortholog); endothelial tip cell fate specification (ortholog); ASSOCIATED WITH COVID-19 (ortholog); genetic disease (ortholog); proliferative vasculopathy and hydranencephaly-hydrocephaly syndrome (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondrial membrane (ortholog); plasma membrane (ortholog) 7 99856705 99919372 + 22301074;30032202 116905302 MODEL JAAIVD010000026;XM_032908185 XP_032764076 FLVCR heme transporter 2;feline leukemia virus subgroup C receptor-related protein 2 protein-coding 625892203 Ifne interferon epsilon INVOLVED IN defense response to bacterium (ortholog); defense response to virus (ortholog); natural killer cell activation (ortholog) 1 65194640 65195396 - 22301074;30032202 116887956 MODEL JAAIVD010000025;XM_032889405 XP_032745296 protein-coding 625892207 LOC116891105 interferon-induced protein with tetratricopeptide repeats 1-like 2 34170871 34263457 - 22301074;30032202 116891105 MODEL JAAIVD010000001;XM_032891818;XM_032891819;XR_004386816;XR_004386817 XP_032747709;XP_032747710 protein-coding 625892220 LOC116888253 vigilin-like X 80111962 80115716 + 30032202 116888253 MODEL JAAIVD010000014;XM_032889537 XP_032745428 protein-coding 625892223 LOC116902662 U6 spliceosomal RNA 5 110581383 110581489 + 116902662 MODEL JAAIVD010000023;XR_004388224 snrna 625892226 LOC116886696 haptoglobin 17 29294439 29300079 - 22301074;30032202 116886696 MODEL JAAIVD010000011;XM_032888194;XM_032888195 XP_032744085;XP_032744086 protein-coding 625892238 Mrps27 mitochondrial ribosomal protein S27 ENCODES a protein that exhibits rRNA binding (ortholog); tRNA binding (ortholog); INVOLVED IN cell population proliferation (ortholog); mitochondrial translation (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial small ribosomal subunit (ortholog); mitochondrion (ortholog) 3 197162892 197231850 - 22301074;30032202 116897251 MODEL JAAIVD010000012;XM_032898981 XP_032754872 28S ribosomal protein S27, mitochondrial protein-coding 625892253 Slc41a2 solute carrier family 41 member 2 ENCODES a protein that exhibits transmembrane transporter activity (ortholog); INVOLVED IN cobalt ion transport (ortholog); iron ion transport (ortholog); magnesium ion transport (ortholog); FOUND IN plasma membrane (ortholog) 1 165100970 165205746 + 22301074;30032202 116907545 MODEL JAAIVD010000025;XM_032910571;XM_032910577;XM_032910585 XP_032766462;XP_032766468;XP_032766476 protein-coding 625892274 LOC116897648 U2 spliceosomal RNA 3 186352233 186352315 + 116897648 MODEL JAAIVD010000012 pseudo 625892275 LOC116887945 uncharacterized LOC116887945 X 62550400 62553387 + 116887945 MODEL JAAIVD010000014 pseudo 625892276 Nsd3 nuclear receptor binding SET domain protein 3 ENCODES a protein that exhibits histone H3K27 dimethyltransferase activity (ortholog); histone H3K27 methyltransferase activity (ortholog); histone H3K27 trimethyltransferase activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH myeloid leukemia (ortholog); NUT midline carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 13 60778434 60890559 - 22301074;30032202 116915112 MODEL JAAIVD010000008;XM_032919542;XM_032919543;XM_032919544;XM_032919545;XM_032919546;XM_032919547 XP_032775433;XP_032775434;XP_032775435;XP_032775436;XP_032775437;XP_032775438 histone-lysine N-methyltransferase NSD3 protein-coding 625892318 LOC116897468 U7 small nuclear RNA 3 140233773 140233839 - 116897468 MODEL JAAIVD010000012 pseudo 625892319 Nfx1 nuclear transcription factor, X-box binding 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of MHC class II biosynthetic process (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); protein autoubiquitination (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 1 117166828 117210894 - 22301074;30032202 116902510 MODEL JAAIVD010000025;XM_032905028 XP_032760919 transcriptional repressor NF-X1 protein-coding 625892339 LOC116906960 putative olfactory receptor 8G3 pseudogene 8 82670301 82671230 + 22301074;30032202 116906960 MODEL JAAIVD010000027;XM_032909881 XP_032765772 protein-coding 625892343 Slc33a1 solute carrier family 33 member 1 ENCODES a protein that exhibits acetyl-CoA transmembrane transporter activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN acetyl-CoA transmembrane transport (ortholog); ASSOCIATED WITH cataract (ortholog); Congenital Cataracts, Hearing Loss, and Neurodegeneration (ortholog); Developmental Disabilities (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 3 91276493 91298825 + 22301074;30032202 116896823 MODEL JAAIVD010000012;XM_032898301;XM_032898302 XP_032754192;XP_032754193 acetyl-coenzyme A transporter 1 protein-coding 625892355 LOC116914128 small nucleolar RNA SNORA17 12 66226511 66226643 + 116914128 MODEL JAAIVD010000007;XR_004389690 snorna 625892358 LOC116897616 small nucleolar RNA SNORA17 3 76759111 76759222 + 116897616 MODEL JAAIVD010000012 pseudo 625892359 Sema3c semaphorin 3C ENCODES a protein that exhibits semaphorin receptor binding (ortholog); INVOLVED IN axon guidance (ortholog); blood vessel remodeling (ortholog); cardiac endothelial to mesenchymal transition (ortholog); ASSOCIATED WITH High Myopia (ortholog); Persistent Truncus Arteriosus (ortholog); rheumatoid arthritis (ortholog); FOUND IN extracellular region (ortholog) 6 147234052 147394229 + 30032202 116904159 MODEL JAAIVD010000024;XM_032907057 XP_032762948 semaphorin-3C protein-coding 625892380 Srxn1 sulfiredoxin 1 ENCODES a protein that exhibits oxidoreductase activity, acting on a sulfur group of donors (ortholog); INVOLVED IN response to oxidative stress (ortholog); FOUND IN cytosol (ortholog) 5 131461912 131467597 + 22301074;30032202 116902114 MODEL JAAIVD010000023;XM_032904427 XP_032760318 sulfiredoxin-1 protein-coding 625892386 LOC116883230 10 kDa heat shock protein, mitochondrial-like 14 56617218 56618137 + 116883230 MODEL JAAIVD010000009 pseudo 625892387 LOC116893199 olfactory receptor 488-like 2 106270019 106270976 - 22301074;30032202 116893199 MODEL JAAIVD010000001;XM_032895096 XP_032750987 protein-coding 625892390 LOC116887933 ferritin heavy chain-like X 61135836 61136483 + 22301074;30032202 116887933 MODEL JAAIVD010000014;XM_032889396 XP_032745287 protein-coding 625892393 LOC116905586 polypyrimidine tract-binding protein 1-like 7 2841697 2843311 + 116905586 MODEL JAAIVD010000026 pseudo 625892394 LOC116914928 uncharacterized LOC116914928 13 6407573 6410927 - 116914928 MODEL JAAIVD010000008;XM_032919357 XP_032775248 uncharacterized protein LOC116914928 protein-coding 625892400 LOC116897045 uncharacterized LOC116897045 3 148579343 148582445 + 116897045 MODEL JAAIVD010000012;XR_004387390 ncrna 625892405 LOC116890080 bcl-2-like protein 1 1 215933939 215934657 + 116890080 MODEL JAAIVD010000025 pseudo 625892406 LOC116902841 amiloride-sensitive amine oxidase [copper-containing]-like 6 92006556 92010338 - 22301074;30032202 116902841 MODEL JAAIVD010000024;XM_032905171 XP_032761062 protein-coding 625892415 LOC116893758 uncharacterized LOC116893758 2 28797612 28802609 + 116893758 MODEL JAAIVD010000001;XR_004387004 ncrna 625892420 Spata13 spermatogenesis associated 13 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN cell migration (ortholog); filopodium assembly (ortholog); lamellipodium assembly (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); filopodium (ortholog) 12 63669310 63741227 - 22301074 116913495 MODEL JAAIVD010000007;XM_032917697 XP_032773588 spermatogenesis-associated protein 13 protein-coding 625892436 Cacna1c calcium voltage-gated channel subunit alpha1 C ENCODES a protein that exhibits alpha-actinin binding (ortholog); calmodulin binding (ortholog); enzyme binding (ortholog); INVOLVED IN adult walking behavior (ortholog); axon development (ortholog); calcium ion import (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH acute stress disorder (ortholog); alcohol dependence (ortholog); Alzheimer's disease (ortholog); FOUND IN axon (ortholog); axon cytoplasm (ortholog); basal pole of outer hair cell (ortholog) 6 27547831 28155928 + 22301074;30032202 116903345 MODEL JAAIVD010000024;XM_032905803;XM_032905804;XM_032905806 XP_032761694;XP_032761695;XP_032761697 voltage-dependent L-type calcium channel subunit alpha-1C protein-coding 625892493 LOC116911803 small nucleolar RNA SNORD113/SNORD114 family 10 61200560 61200639 - 116911803 MODEL JAAIVD010000005 pseudo 625892494 LOC116883631 high mobility group protein B1-like 14 53374224 53374849 - 116883631 MODEL JAAIVD010000009 pseudo 625892495 LOC116902705 importin subunit alpha-1-like 6 43126498 43128103 + 116902705 MODEL JAAIVD010000024 pseudo 625892496 Arhgef7 Rho guanine nucleotide exchange factor 7 ENCODES a protein that exhibits ATP-dependent protein binding (ortholog); gamma-tubulin binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN astrocyte cell migration (ortholog); Golgi organization (ortholog); hematopoietic progenitor cell differentiation (ortholog); PARTICIPATES IN adenosine signaling pathway; FOUND IN centrosome (ortholog); cytosol (ortholog); focal adhesion (ortholog) 13 72016421 72123101 - 22301074 116914803 MODEL JAAIVD010000008;XM_032919253;XM_032919254;XM_032919256;XM_032919257 XP_032775144;XP_032775145;XP_032775147;XP_032775148 protein-coding 625892529 Chga chromogranin A INVOLVED IN defense response to Gram-negative bacterium (ortholog); defense response to Gram-positive bacterium (ortholog); mast cell activation (ortholog); PARTICIPATES IN G protein mediated signaling pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); end stage renal disease (ortholog); hypertension (ortholog); FOUND IN chromaffin granule (ortholog); extracellular region (ortholog); neuronal dense core vesicle (ortholog) 7 113829207 113840466 + 2828116;30032202 116905358 MODEL JAAIVD010000026;X06832;XM_032908276 CAA29988;XP_032764167 chromogranin-A protein-coding 625892541 LOC116894186 olfactory receptor 477 2 106014720 106015652 + 22301074;30032202 116894186 MODEL JAAIVD010000001;XM_032895901 XP_032751792 protein-coding 625892544 Ctnna1 catenin alpha 1 ENCODES a protein that exhibits actin filament binding (ortholog); beta-catenin binding (ortholog); cadherin binding (ortholog); INVOLVED IN apical junction assembly (ortholog); axon regeneration (ortholog); cellular response to indole-3-methanol (ortholog); PARTICIPATES IN E-cadherin signaling pathway; N-cadherin signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); cervix uteri carcinoma in situ (ortholog); FOUND IN acrosomal vesicle (ortholog); adherens junction (ortholog); catenin complex (ortholog) 15 9099331 9228329 - 22301074;30032202 116884744 MODEL JAAIVD010000010;XM_032885963 XP_032741854 catenin alpha-1 protein-coding 625892566 Krtdap keratinocyte differentiation associated protein INVOLVED IN epidermis development (ortholog); FOUND IN extracellular region (ortholog); lamellar body (ortholog) 2 165224817 165227794 - 22301074;30032202 116894452 MODEL JAAIVD010000001;XM_032896157 XP_032752048 keratinocyte differentiation-associated protein protein-coding 625892576 LOC116904743 small nucleolar RNA SNORA17 6 42637066 42637196 - 116904743 MODEL JAAIVD010000024;XR_004388429 snorna 625892579 LOC116889944 olfactory receptor 6C74-like 1 161361640 161362572 + 22301074;30032202 116889944 MODEL JAAIVD010000025;XM_032890750 XP_032746641 protein-coding 625892582 LOC116885784 vomeronasal type-1 receptor 1-like 1 214829407 214830373 + 116885784 MODEL JAAIVD010000025 pseudo 625892583 Fgfr4 fibroblast growth factor receptor 4 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); fibroblast growth factor receptor activity (ortholog); heparin binding (ortholog); INVOLVED IN alveolar secondary septum development (ortholog); cell migration (ortholog); cholesterol homeostasis (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); adult respiratory distress syndrome (ortholog); cancer (ortholog); FOUND IN cell-cell junction (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) 14 73480630 73495762 + 22301074;30032202 116883723 MODEL JAAIVD010000009;XM_032884948;XM_032884949;XM_032884950;XM_032884951;XM_032884952;XM_032884953 XP_032740839;XP_032740840;XP_032740841;XP_032740842;XP_032740843;XP_032740844 protein-coding 625892616 Trnae-uuc transfer RNA glutamic acid (anticodon UUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60926497 60926568 - 116897691 MODEL JAAIVD010000012 trna 625892617 Cimap3 ciliary microtubule associated protein 3 ENCODES a protein that exhibits beta-tubulin binding (ortholog); gamma-tubulin binding (ortholog); kinesin binding (ortholog); INVOLVED IN cilium organization (ortholog); embryonic heart tube left/right pattern formation (ortholog); positive regulation of kinase activity (ortholog); FOUND IN ciliary basal body (ortholog); cytoplasm (ortholog); nucleus (ortholog) 3 52115269 52121887 + 30032202 116896408 MODEL JAAIVD010000012;XM_032897552 XP_032753443 Pifo primary cilia formation;protein pitchfork protein-coding 625892627 Bag1 BAG cochaperone 1 ENCODES a protein that exhibits adenyl-nucleotide exchange factor activity (ortholog); phosphoprotein binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of motor neuron apoptotic process (ortholog); negative regulation of protein phosphorylation (ortholog); PARTICIPATES IN chaperone mediated autophagy pathway; ASSOCIATED WITH breast cancer (ortholog); Breast Neoplasms (ortholog); cervix carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 1 117234366 117246964 + 22301074;30032202 116900677 MODEL JAAIVD010000025;XM_032902416 XP_032758307 BAG family molecular chaperone regulator 1 protein-coding 625892637 LOC116907157 ATP synthase F(0) complex subunit B1, mitochondrial-like 8 87704645 87705386 - 116907157 MODEL JAAIVD010000027 pseudo 625892638 LOC116895530 late cornified envelope protein 3D-like 3 120331748 120332824 + 22301074 116895530 MODEL JAAIVD010000012;XM_032896775 XP_032752666 protein-coding 625892644 Gmpr2 guanosine monophosphate reductase 2 ENCODES a protein that exhibits GMP reductase activity (ortholog); INVOLVED IN GMP metabolic process (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); Stomach Neoplasms (ortholog) 12 69326153 69332886 - 22301074 116913115 MODEL JAAIVD010000007;XM_032917269;XM_032917270;XM_032917271;XM_032917272 XP_032773160;XP_032773161;XP_032773162;XP_032773163 GMP reductase 2 protein-coding 625892667 Tle7 TLE family member 7 17 29804755 29816372 + 22301074;30032202 116886104 MODEL JAAIVD010000011;XM_032887434 XP_032743325 transducin-like enhancer protein 7 protein-coding 625892679 Daam2 dishevelled associated activator of morphogenesis 2 INVOLVED IN determination of left/right symmetry (ortholog); dorsal spinal cord development (ortholog); negative regulation of oligodendrocyte differentiation (ortholog); ASSOCIATED WITH genetic disease (ortholog); nephrotic syndrome type 24 (ortholog); osteoporosis (ortholog); FOUND IN nucleoplasm (ortholog) 4 80366269 80480704 + 22301074;30032202 116899062 MODEL JAAIVD010000003;XM_032900533 XP_032756424 disheveled-associated activator of morphogenesis 2 protein-coding 625892709 Heatr5b HEAT repeat containing 5B ASSOCIATED WITH Cerebellar Atrophy with Seizures and Variable Developmental Delay (ortholog); pontocerebellar hypoplasia (ortholog); FOUND IN Golgi apparatus (ortholog) 7 14401742 14483118 + 30032202 116905903 MODEL JAAIVD010000026;XM_032908893 XP_032764784 HEAT repeat-containing protein 5B protein-coding 625892749 Trnak-cuu transfer RNA lysine (anticodon CUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 47656089 47656161 - 116895142 MODEL JAAIVD010000001 trna 625892750 Lrrc4 leucine rich repeat containing 4 INVOLVED IN excitatory synapse assembly (ortholog); modulation of chemical synaptic transmission (ortholog); postsynaptic density protein 95 clustering (ortholog); FOUND IN dendritic spine (ortholog); excitatory synapse (ortholog); glutamatergic synapse (ortholog) 6 110718403 110723004 + 22301074;30032202 116904024 MODEL JAAIVD010000024;XM_032906853 XP_032762744 leucine-rich repeat-containing protein 4 protein-coding 625892756 Them5 thioesterase superfamily member 5 ENCODES a protein that exhibits long-chain fatty acyl-CoA hydrolase activity (ortholog); INVOLVED IN long-chain fatty-acyl-CoA metabolic process (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 3 62826522 62831262 - 30032202 116895415 MODEL JAAIVD010000012;XM_032896698 XP_032752589 acyl-coenzyme A thioesterase THEM5 protein-coding 625892765 LOC116899800 U7 small nuclear RNA 4 96373398 96373456 - 116899800 MODEL JAAIVD010000003;XR_004387802 snrna 625892768 LOC116887642 mitochondrial fission regulator 1-like 18 15208809 15210152 + 116887642 MODEL JAAIVD010000013 pseudo 625892769 LOC116894086 olfactory receptor 52A1-like 2 103222931 103223885 + 116894086 MODEL JAAIVD010000001 pseudo 625892770 Tnks tankyrase ENCODES a protein that exhibits histone binding (ortholog); NAD+ poly-ADP-ribosyltransferase activity (ortholog); NAD+-protein mono-ADP-ribosyltransferase activity (ortholog); INVOLVED IN cellular response to nutrient (ortholog); negative regulation of maintenance of mitotic sister chromatid cohesion, telomeric (ortholog); negative regulation of telomere maintenance via telomere lengthening (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; FOUND IN chromosome, telomeric region (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 13 52062042 52201807 + 22301074;30032202 116914592 MODEL JAAIVD010000008;XM_032918953 XP_032774844 poly [ADP-ribose] polymerase tankyrase-1 protein-coding 625892801 Rasl11a RAS like family 11 member A INVOLVED IN positive regulation of transcription by RNA polymerase I (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); endometriosis (ortholog); FOUND IN nucleolus (ortholog) 16 7040906 7046872 - 22301074 116885379 MODEL JAAIVD010000004;XM_032886656 XP_032742547 ras-like protein family member 11A protein-coding 625892810 Podxl2 podocalyxin like 2 INVOLVED IN leukocyte tethering or rolling (ortholog) 6 57458306 57490392 + 116903519 MODEL JAAIVD010000024;XM_032906126 XP_032762017 podocalyxin-like protein 2 protein-coding 625892822 Slc16a14 solute carrier family 16 member 14 4 157609832 157635812 - 22301074;30032202 116899577 MODEL JAAIVD010000003;XM_032901513;XM_032901514;XM_032901515;XM_032901516;XM_032901517 XP_032757404;XP_032757405;XP_032757406;XP_032757407;XP_032757408 monocarboxylate transporter 14 protein-coding 625892843 Rpain RPA interacting protein INVOLVED IN protein import into nucleus (ortholog); response to UV (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); PML body (ortholog) 9 50594363 50602289 + 30032202 116909123 MODEL JAAIVD010000002;XM_032912598 XP_032768489 RPA-interacting protein protein-coding 625892854 LOC116907225 uncharacterized LOC116907225 1 159727174 159771762 + 116907225 MODEL JAAIVD010000025 pseudo 625892855 Chuk component of inhibitor of nuclear factor kappa B kinase complex ENCODES a protein that exhibits IkappaB kinase activity (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); cellular response to tumor necrosis factor (ortholog); cellular response to virus (ortholog); PARTICIPATES IN adenosine signaling pathway; FasL mediated signaling pathway; interleukin-1 signaling pathway; ASSOCIATED WITH asthma (ortholog); autistic disorder (ortholog); bacterial pneumonia (ortholog); FOUND IN CD40 receptor complex (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) 2 43604916 43639986 - 22301074;30032202 116891206 MODEL JAAIVD010000001;XM_032892033;XM_032892034 XP_032747924;XP_032747925 inhibitor of nuclear factor kappa-B kinase subunit alpha protein-coding 625892883 LOC116899821 small nucleolar RNA SNORA41 4 137167092 137167223 + 116899821 MODEL JAAIVD010000003;XR_004387821 snorna 625892886 Szt2 SZT2 subunit of KICSTOR complex INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to glucose starvation (ortholog); central nervous system development (ortholog); ASSOCIATED WITH benign epilepsy with centrotemporal spikes (ortholog); cryptorchidism (ortholog); developmental and epileptic encephalopathy (ortholog); FOUND IN GATOR1 complex (ortholog); GATOR2 complex (ortholog); KICSTOR complex (ortholog) 1 38617662 38663765 + 30032202 116897825 MODEL JAAIVD010000025;XM_032899240 XP_032755131 KICSTOR complex protein SZT2 protein-coding 625892962 LOC116892758 vomeronasal type-2 receptor 116-like 2 182771807 182810975 + 22301074;30032202 116892758 MODEL JAAIVD010000001;XM_032894635;XM_032894636 XP_032750526;XP_032750527 protein-coding 625892973 Psmd2 proteasome 26S subunit ubiquitin receptor, non-ATPase 2 INVOLVED IN regulation of AMPA receptor activity (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog); proteasome regulatory particle (ortholog) 4 5476680 5487449 + 22301074;30032202 116898700 MODEL JAAIVD010000003;XM_032899963 XP_032755854 26S proteasome non-ATPase regulatory subunit 2;proteasome 26S subunit, non-ATPase 2 protein-coding 625892998 Pmvk phosphomevalonate kinase ENCODES a protein that exhibits ATP binding (ortholog); phosphomevalonate kinase activity (ortholog); INVOLVED IN cholesterol biosynthetic process (ortholog); cholesterol biosynthetic process via desmosterol (ortholog); cholesterol biosynthetic process via lathosterol (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH genetic disease (ortholog); porokeratosis (ortholog); Porokeratosis 1, Multiple Types (ortholog); FOUND IN cytosol (ortholog); peroxisome (ortholog) 3 64199570 64208856 - 22301074;30032202 116896637 MODEL JAAIVD010000012;XM_032897954 XP_032753845 protein-coding 625893007 LOC116906268 heterogeneous nuclear ribonucleoprotein A3-like 7 123238851 123240160 + 116906268 MODEL JAAIVD010000026 pseudo 625893008 LOC116897792 olfactory receptor 2L8-like 4 4459804 4460742 - 22301074 116897792 MODEL JAAIVD010000003;XM_032899212 XP_032755103 protein-coding 625893011 Bcorl1 BCL6 corepressor like 1 ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Developmental Disabilities (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) X 110004750 110071886 - 22301074;30032202 116888442 MODEL JAAIVD010000014;XM_032889718 XP_032745609 BCL-6 corepressor-like protein 1 protein-coding 625893030 Nbn nibrin ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); damaged DNA binding (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN blastocyst growth (ortholog); cell population proliferation (ortholog); DNA damage checkpoint signaling (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; homologous recombination pathway of double-strand break repair; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); adenosine deaminase deficiency (ortholog); Alzheimer's disease (ortholog); FOUND IN chromosome, telomeric region (ortholog); Mre11 complex (ortholog); nuclear inclusion body (ortholog) 1 127791546 127827688 - 22301074;30032202 116903161 MODEL JAAIVD010000025;XM_032905532 XP_032761423 protein-coding 625893050 LOC116912064 angiogenic factor with G patch and FHA domains 1-like 11 98551748 98561077 + 116912064 MODEL JAAIVD010000006;XM_032915926 XP_032771817 protein-coding 625893060 Itprid2 ITPR interacting domain containing 2 ENCODES a protein that exhibits actin filament binding (ortholog); ASSOCIATED WITH retinitis pigmentosa (ortholog); FOUND IN cytosol (ortholog) 5 56854028 56891289 + 22301074 116901563 MODEL JAAIVD010000023;XM_032903557;XM_032903558 XP_032759448;XP_032759449 protein ITPRID2 protein-coding 625893088 Cacng5 calcium voltage-gated channel auxiliary subunit gamma 5 INVOLVED IN regulation of AMPA receptor activity (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); glutamatergic synapse (ortholog); postsynaptic density (ortholog) 9 71215310 71257693 + 22301074;30032202 116909965 MODEL JAAIVD010000002;XM_032913740 XP_032769631 voltage-dependent calcium channel gamma-5 subunit protein-coding 625893098 Pgr progesterone receptor ENCODES a protein that exhibits ATPase binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); enzyme binding (ortholog); INVOLVED IN cellular response to estrogen stimulus (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); cellular response to gonadotropin stimulus (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Animal Mammary Neoplasms (ortholog); Brain Injuries (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); chromatin (ortholog) 8 5027781 5094179 - 22301074 116906665 MODEL JAAIVD010000027;XM_032909448 XP_032765339 protein-coding 625893110 Actr3b actin related protein 3B 6 154947465 155041685 + 30032202 116904228 MODEL JAAIVD010000024;XM_032907166;XM_032907167 XP_032763057;XP_032763058 actin-related protein 3B protein-coding 625893128 Slc30a7 solute carrier family 30 member 7 ENCODES a protein that exhibits identical protein binding (ortholog); zinc ion transmembrane transporter activity (ortholog); INVOLVED IN intracellular zinc ion homeostasis (ortholog); zinc ion import into Golgi lumen (ortholog); zinc ion transport (ortholog); ASSOCIATED WITH Esophageal Neoplasms (ortholog); Hypogonadism and Testicular Atrophy (ortholog); ZIEGLER-HUANG SYNDROME (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); Golgi apparatus (ortholog) 3 43711590 43776278 + 22301074;30032202 116896338 MODEL JAAIVD010000012;XM_032897441 XP_032753332 zinc transporter 7 protein-coding 625893143 LOC116894966 U1 spliceosomal RNA 2 171163025 171163169 + 116894966 MODEL JAAIVD010000001 pseudo 625893144 C18H22orf15 chromosome 18 C22orf15 homolog 18 11507726 11509969 + 116887284 MODEL JAAIVD010000013;XM_032888864 XP_032744755 uncharacterized protein C22orf15 homolog protein-coding 625893154 LOC116894526 vomeronasal type-1 receptor 4-like 2 175361585 175362571 + 22301074;30032202 116894526 MODEL JAAIVD010000001;XM_032896225 XP_032752116 protein-coding 625893157 LOC116898966 biotin--protein ligase-like 4 50344894 50359627 + 30032202 116898966 MODEL JAAIVD010000003;XM_032900390;XM_032900391 XP_032756281;XP_032756282 protein-coding 625893168 Rtn4rl2 reticulon 4 receptor like 2 ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); corpus callosum development (ortholog); negative regulation of neuron projection development (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); external side of plasma membrane (ortholog) 5 62254211 62271286 - 22301074;30032202 116901591 MODEL JAAIVD010000023;XM_032903609;XM_032903610;XM_032903611;XM_032903612 XP_032759500;XP_032759501;XP_032759502;XP_032759503 reticulon-4 receptor-like 2 protein-coding 625893184 Pdcd6 programmed cell death 6 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to heat (ortholog); COPII vesicle coating (ortholog); FOUND IN COPII vesicle coat (ortholog); Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) 2 203728410 203737616 - 22301074 116892920 MODEL JAAIVD010000001;XM_032894846;XM_032894847 XP_032750737;XP_032750738 programmed cell death protein 6 protein-coding 625893194 LOC116912003 eukaryotic translation initiation factor 4E type 2-like 11 53213416 53214585 + 116912003 MODEL JAAIVD010000006 pseudo 625893195 LOC116889402 uncharacterized LOC116889402 X 2896300 2918435 + 116889402 MODEL JAAIVD010000014;XR_004386380 ncrna 625893200 LOC116886125 uncharacterized LOC116886125 17 42193604 42206351 - 116886125 MODEL JAAIVD010000011;XR_004386090 ncrna 625893204 LOC116906155 acyl-coenzyme A thioesterase 1-like 7 98176429 98182133 - 30032202 116906155 MODEL JAAIVD010000026;XM_032909136 XP_032765027 protein-coding 625893211 LOC116894255 vomeronasal type-2 receptor 116-like 2 115357915 115380131 - 22301074;30032202 116894255 MODEL JAAIVD010000001;XM_032895961 XP_032751852 protein-coding 625893219 Ncaph2 non-SMC condensin II complex subunit H2 INVOLVED IN cerebral cortex development (ortholog); female meiosis chromosome separation (ortholog); female meiotic nuclear division (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); mitochondrial DNA depletion syndrome 8A (ortholog); FOUND IN chromosome (ortholog); condensed chromosome (ortholog); condensed nuclear chromosome (ortholog) 1 258654274 258672016 + 30032202 116915091 MODEL JAAIVD010000025;XM_032919520;XM_032919527 XP_032775411;XP_032775418 condensin-2 complex subunit H2 protein-coding 625893245 Pyurf PIGY upstream open reading frame INVOLVED IN protein stabilization (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondrion (ortholog) 6 83501879 83505491 - 116903734 MODEL JAAIVD010000024;XM_032906419 XP_032762310 PIGY upstream reading frame;protein preY, mitochondrial protein-coding 625893251 LOC116902816 vomeronasal type-1 receptor 100-like 6 84008116 84009033 - 22301074;30032202 116902816 MODEL JAAIVD010000024;XM_032905148 XP_032761039 protein-coding 625893254 LOC116900160 protein max-like 5 26067937 26068996 - 22301074;30032202 116900160 MODEL JAAIVD010000023;XM_032901925 XP_032757816 protein-coding 625893258 Hfe homeostatic iron regulator ENCODES a protein that exhibits beta-2-microglobulin binding (ortholog); co-receptor binding (ortholog); peptide antigen binding (ortholog); INVOLVED IN acute-phase response (ortholog); BMP signaling pathway (ortholog); cell surface receptor signaling pathway (ortholog); ASSOCIATED WITH Abdominal Pain (ortholog); acute lymphoblastic leukemia (ortholog); alcohol-associated liver disease (ortholog); FOUND IN apical part of cell (ortholog); basal part of cell (ortholog); cytoplasmic vesicle (ortholog) 14 42703538 42711091 - 30032202 116883585 MODEL JAAIVD010000009;XM_032884765 XP_032740656 hereditary hemochromatosis protein protein-coding 625893268 Morc4 MORC family CW-type zinc finger 4 ENCODES a protein that exhibits histone H3K4me3 reader activity (ortholog); ASSOCIATED WITH Macrocephaly (ortholog); FOUND IN nucleoplasm (ortholog) X 92205069 92253785 + 22301074;30032202 116888638 MODEL JAAIVD010000014;XM_032889931 XP_032745822 MORC family CW-type zinc finger protein 4 protein-coding 625893289 Adad1 adenosine deaminase domain containing 1 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN spermatid development (ortholog); FOUND IN nucleus (ortholog) 3 116917033 116949712 - 22301074;30032202 116895519 MODEL JAAIVD010000012;XM_032896764;XM_032896765 XP_032752655;XP_032752656 adenosine deaminase domain-containing protein 1 protein-coding 625893310 Psme4 proteasome activator subunit 4 ENCODES a protein that exhibits peptidase activator activity (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); proteasomal ubiquitin-independent protein catabolic process (ortholog); ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); visceral heterotaxy (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 11 98279674 98382992 + 30032202 116912450 MODEL JAAIVD010000006;XM_032916519 XP_032772410 proteasome activator complex subunit 4 protein-coding 625893361 LOC116883544 uncharacterized LOC116883544 14 31246068 31301814 + 116883544 MODEL JAAIVD010000009;XR_004385771 ncrna 625893366 Trnar-ucu transfer RNA arginine (anticodon UCU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889703 MODEL JAAIVD010000052 trna 625893367 LOC116894308 myeloid cell surface antigen CD33-like 2 143426687 143435132 - 30032202 116894308 MODEL JAAIVD010000001;XM_032896004 XP_032751895 protein-coding 625893376 LOC116893488 zinc finger SWIM domain-containing protein 5-like 2 181885549 181914328 + 116893488 MODEL JAAIVD010000001 pseudo 625893377 LOC116894116 olfactory receptor 52N2-like 2 103693207 103694157 - 22301074 116894116 MODEL JAAIVD010000001;XM_032895834 XP_032751725 protein-coding 625893380 Rec114 REC114 meiotic recombination protein INVOLVED IN meiotic DNA double-strand break formation (ortholog); oogenesis (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH Oocyte/Zygote/Embryo Maturation Arrest 10 (ortholog); FOUND IN chromosome (ortholog) 8 52520109 52612115 - 116906760 MODEL JAAIVD010000027;XM_032909597;XM_032909598;XM_032909599 XP_032765488;XP_032765489;XP_032765490 meiotic recombination protein REC114 protein-coding 625893396 LOC116894866 U6 spliceosomal RNA 2 78810345 78810447 + 116894866 MODEL JAAIVD010000001;XR_004387079 snrna 625893399 Thg1l tRNA-histidine guanylyltransferase 1 like ENCODES a protein that exhibits ATP binding (ortholog); GTP binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN mitochondrial fusion (ortholog); protein homotetramerization (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 28 (ortholog); Fibrosis (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog); transferase complex (ortholog) 9 28673734 28682334 - 22301074;30032202 116909790 MODEL JAAIVD010000002;XM_032913485;XM_032913486 XP_032769376;XP_032769377 probable tRNA(His) guanylyltransferase protein-coding 625893412 Grsf1 G-rich RNA sequence binding factor 1 ENCODES a protein that exhibits mRNA binding (ortholog); RNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); morphogenesis of embryonic epithelium (ortholog); positive regulation of mitochondrial RNA catabolic process (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial nucleoid (ortholog); mitochondrion (ortholog) 11 2141698 2158957 - 22301074;30032202 116912245 MODEL JAAIVD010000006;XM_032916224;XM_032916225;XM_032916227 XP_032772115;XP_032772116;XP_032772118 G-rich sequence factor 1 protein-coding 625893432 Rnf213 ring finger protein 213 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN angiogenesis (ortholog); defense response to bacterium (ortholog); lipid droplet formation (ortholog); ASSOCIATED WITH coarctation of the aorta (ortholog); epilepsy (ortholog); Moyamoya Disease 2 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lipid droplet (ortholog) 9 64534559 64631765 - 22301074;30032202 116908676 MODEL JAAIVD010000002;XM_032911975 XP_032767866 E3 ubiquitin-protein ligase RNF213 protein-coding 625893504 Arhgef38 Rho guanine nucleotide exchange factor 38 3 25707141 25820053 + 22301074 116896233 MODEL JAAIVD010000012;XM_032897295 XP_032753186 protein-coding 625893522 Epha8 EPH receptor A8 ENCODES a protein that exhibits ephrin receptor activity (ortholog); GPI-linked ephrin receptor activity (ortholog); growth factor binding (ortholog); INVOLVED IN axon guidance (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); ephrin receptor signaling pathway (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH High Myopia (ortholog); FOUND IN neuron projection (ortholog); plasma membrane (ortholog) 1 21277321 21303026 + 22301074;30032202 116894195 MODEL JAAIVD010000025;XM_032895911 XP_032751802 ephrin type-A receptor 8 protein-coding 625893542 LOC116911597 40S ribosomal protein S15-like 10 21612673 21613063 - 116911597 MODEL JAAIVD010000005 pseudo 625893543 LOC116900662 bcl-2-like protein 12 5 126349051 126349792 - 116900662 MODEL JAAIVD010000023 pseudo 625893544 Prox1 prospero homeobox 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA binding domain binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN acinar cell differentiation (ortholog); aorta smooth muscle tissue morphogenesis (ortholog); atrial cardiac muscle tissue morphogenesis (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); Neoplasm Metastasis (ortholog); obesity (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 10 68195107 68244619 - 30032202 116911283 MODEL JAAIVD010000005;XM_032915190;XM_032915191 XP_032771081;XP_032771082 prospero homeobox protein 1 protein-coding 625893556 LOC116890356 U6 spliceosomal RNA 1 13205245 13205351 + 116890356 MODEL JAAIVD010000025;XR_004386575 snrna 625893559 Ccdc83 coiled-coil domain containing 83 2 110917566 110951562 + 116894232 MODEL JAAIVD010000001;XM_032895939 XP_032751830 coiled-coil domain-containing protein 83 protein-coding 625893573 Znf771 zinc finger protein 771 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 2 74633690 74644505 - 30032202 116891481 MODEL JAAIVD010000001;XM_032892582;XM_032892583 XP_032748473;XP_032748474 protein-coding 625893584 LOC116887400 olfactory receptor 12D3-like 18 10472104 10473069 + 22301074 116887400 MODEL JAAIVD010000013;XM_032888993 XP_032744884 protein-coding 625893587 Plscr3 phospholipid scramblase 3 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); lead ion binding (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to lipopolysaccharide (ortholog); cholesterol homeostasis (ortholog); ASSOCIATED WITH intellectual disability (ortholog); obesity (ortholog); FOUND IN cytosol (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 9 49452439 49457183 + 22301074;30032202 116909399 MODEL JAAIVD010000002;XM_032912964;XM_032912965 XP_032768855;XP_032768856 protein-coding 625893602 Cttnbp2nl CTTNBP2 N-terminal like ENCODES a protein that exhibits protein phosphatase 2A binding (ortholog); INVOLVED IN negative regulation of transmembrane transport (ortholog); negative regulation of transporter activity (ortholog); protein dephosphorylation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN actin cytoskeleton (ortholog); FAR/SIN/STRIPAK complex (ortholog) 3 53059202 53106113 + 116896421 MODEL JAAIVD010000012;XM_032897567 XP_032753458 CTTNBP2 N-terminal-like protein protein-coding 625893612 LOC116893318 uncharacterized LOC116893318 2 152398462 152412524 + 116893318 MODEL JAAIVD010000001 pseudo 625893613 Rbm8a RNA binding motif protein 8A ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); mRNA metabolic process (ortholog); mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH genetic disease (ortholog); thrombocytopenia-absent radius syndrome (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); dendrite (ortholog); exon-exon junction complex (ortholog) 3 60674137 60677004 - 22301074;30032202 116896507 MODEL JAAIVD010000012;XM_032897686;XM_032897687 XP_032753577;XP_032753578 RNA-binding protein 8A protein-coding 625893627 LOC116915207 mitochondrial fission regulator 2-like 14 116856 117984 + 116915207 MODEL JAAIVD010000009 pseudo 625893628 LOC116898000 elongin-C-like 4 61373250 61373672 - 116898000 MODEL JAAIVD010000003 pseudo 625893629 Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 ENCODES a protein that exhibits JUN kinase binding (ortholog); kinesin binding (ortholog); MAP kinase scaffold activity (ortholog); INVOLVED IN anterograde axonal protein transport (ortholog); axon development (ortholog); axon guidance (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); Developmental Disease (ortholog); epilepsy (ortholog); FOUND IN axolemma (ortholog); axon (ortholog); cell body (ortholog) 9 2178242 2217760 - 30032202 116909337 MODEL JAAIVD010000002;XM_032912881;XM_032912882;XM_032912883;XM_032912884;XM_032912885;XM_032912886;XM_032912887;XM_032912888 XP_032768772;XP_032768773;XP_032768774;XP_032768775;XP_032768776;XP_032768777;XP_032768778;XP_032768779 C-Jun-amino-terminal kinase-interacting protein 3 protein-coding 625893679 LOC116895391 protein SET-like 3 58005034 58006563 - 22301074;30032202 116895391 MODEL JAAIVD010000012;XM_032896681 XP_032752572 protein-coding 625893684 LOC116906058 nucleolar and spindle-associated protein 1-like 7 49538821 49542064 + 116906058 MODEL JAAIVD010000026 pseudo 625893685 Hcfc2 host cell factor C2 ENCODES a protein that exhibits transcription coregulator activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); immune response involved in response to exogenous dsRNA (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 1 165709742 165738782 - 22301074;30032202 116907633 MODEL JAAIVD010000025;XM_032910698 XP_032766589 host cell factor 2 protein-coding 625893703 Gem GTP binding protein overexpressed in skeletal muscle ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN chromosome organization (ortholog); metaphase chromosome alignment (ortholog); mitotic cell cycle (ortholog); ASSOCIATED WITH glaucoma (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); midbody (ortholog); mitotic spindle (ortholog) 1 131851263 131862438 - 22301074;30032202 116903367 MODEL JAAIVD010000025;XM_032905855 XP_032761746 GTP-binding protein GEM protein-coding 625893712 Fdx2 ferredoxin 2 ENCODES a protein that exhibits electron transfer activity (ortholog); INVOLVED IN [2Fe-2S] cluster assembly (ortholog); [4Fe-4S] cluster assembly (ortholog); ubiquinone biosynthetic process (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; ASSOCIATED WITH mitochondrial myopathy (ortholog); Multiple mitochondrial dysfunctions syndrome 8 (ortholog); FOUND IN mitochondrion (ortholog) 8 17330246 17335181 - 22301074;30032202 116907468 MODEL JAAIVD010000027;XM_032910453 XP_032766344 ferredoxin-2, mitochondrial protein-coding 625893721 Zeb1 zinc finger E-box binding homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN animal organ development (ortholog); cartilage development (ortholog); cellular response to amino acid stimulus (ortholog); ASSOCIATED WITH acute myocardial infarction (ortholog); Breast Neoplasms (ortholog); corneal dystrophy (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 14 31958007 32114227 + 30032202 116883999 MODEL JAAIVD010000009;XM_032885232;XM_032885234;XM_032885235;XM_032885236 XP_032741123;XP_032741125;XP_032741126;XP_032741127 zinc finger E-box-binding homeobox 1 protein-coding 625893742 Psma8 proteasome 20S subunit alpha 8 INVOLVED IN meiotic cell cycle (ortholog); proteasomal protein catabolic process (ortholog); regulation of meiosis I (ortholog); FOUND IN nucleus (ortholog); spermatoproteasome complex (ortholog) 15 29030026 29066103 - 22301074;30032202 116884950 MODEL JAAIVD010000010;XM_032886155 XP_032742046 proteasome subunit alpha-type 8 protein-coding 625893749 Api5 apoptosis inhibitor 5 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of fibroblast apoptotic process (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog); spliceosomal complex (ortholog) 5 68577940 68601406 - 30032202 116901661 MODEL JAAIVD010000023;XM_032903775;XM_032903776 XP_032759666;XP_032759667 protein-coding 625893770 Aplp1 amyloid beta precursor like protein 1 ENCODES a protein that exhibits alpha-2A adrenergic receptor binding (ortholog); alpha-2B adrenergic receptor binding (ortholog); alpha-2C adrenergic receptor binding (ortholog); INVOLVED IN cellular response to norepinephrine stimulus (ortholog); cytosolic mRNA polyadenylation (ortholog); extracellular matrix organization (ortholog); FOUND IN Golgi apparatus (ortholog); membrane (ortholog); perinuclear region of cytoplasm (ortholog) 2 165556084 165566706 + 22301074;30032202 116892318 MODEL JAAIVD010000001;XM_032893941;XM_032893942 XP_032749832;XP_032749833 amyloid-like protein 1 protein-coding 625893793 LOC116894226 60S ribosomal protein L3-like 2 107653761 107655013 + 116894226 MODEL JAAIVD010000001 pseudo 625893794 Ttc23 tetratricopeptide repeat domain 23 INVOLVED IN positive regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH orofaciodigital syndrome (ortholog); FOUND IN cilium (ortholog) 2 132611455 132698326 - 22301074 116891980 MODEL JAAIVD010000001;XM_032893423;XM_032893424;XM_032893425;XM_032893426;XM_032893427 XP_032749314;XP_032749315;XP_032749316;XP_032749317;XP_032749318 tetratricopeptide repeat protein 23 protein-coding 625893829 LOC116901981 serine/threonine-protein phosphatase PP1-gamma catalytic subunit-like 1 126702112 126703946 - 116901981 MODEL JAAIVD010000025 pseudo 625893830 LOC116897511 small nucleolar RNA SNORA2/SNORA34 family 3 140341569 140341691 + 116897511 MODEL JAAIVD010000012 pseudo 625893831 Dgat2 diacylglycerol O-acyltransferase 2 ENCODES a protein that exhibits 2-acylglycerol O-acyltransferase activity (ortholog); diacylglycerol O-acyltransferase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to oleic acid (ortholog); cholesterol homeostasis (ortholog); diacylglycerol biosynthetic process (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease type 2A1 (ortholog); Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); lipid droplet (ortholog) 2 97429411 97459929 - 30032202 116891718 MODEL JAAIVD010000001;XM_032893008 XP_032748899 protein-coding 625893843 LOC116903696 hairy/enhancer-of-split related with YRPW motif-like protein 6 6338157 6340137 + 116903696 MODEL JAAIVD010000024 pseudo 625893844 Ciao2b cytosolic iron-sulfur assembly component 2B INVOLVED IN chromosome segregation (ortholog); protein maturation (ortholog); PARTICIPATES IN cytosolic iron-sulfur cluster protein assembly pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic [4Fe-4S] assembly targeting complex (ortholog) 17 12909991 12911975 - 30032202 116886514 MODEL JAAIVD010000011;XM_032888025 XP_032743916 protein-coding 625893853 LOC116886011 small nucleolar RNA SNORA26 16 39140739 39140859 - 116886011 MODEL JAAIVD010000004;XR_004386080 snorna 625893856 Ptgr1 prostaglandin reductase 1 ENCODES a protein that exhibits 13-lipoxin reductase activity (ortholog); 15-oxoprostaglandin 13-reductase [NAD(P)+] activity (ortholog); 2-alkenal reductase (NADPH) activity (ortholog); INVOLVED IN leukotriene B4 metabolic process (ortholog); lipoxin A4 metabolic process (ortholog); negative regulation of positive chemotaxis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Experimental Liver Neoplasms (ortholog); hypertension (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 1 92455224 92471636 + 22301074;30032202 116901570 MODEL JAAIVD010000025;XM_032903569 XP_032759460 protein-coding 625893869 Col10a1 collagen type X alpha 1 chain INVOLVED IN bone development (ortholog); cartilage development (ortholog); endochondral ossification (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH degenerative disc disease (ortholog); lung adenocarcinoma (ortholog); lung metastasis (ortholog); FOUND IN cell cortex (ortholog); collagen trimer (ortholog); extracellular matrix (ortholog) 18 36024866 36030519 - 22301074 116886848 MODEL JAAIVD010000013;XM_032888300 XP_032744191 collagen alpha-1(X) chain protein-coding 625893875 G6pc2 glucose-6-phosphatase catalytic subunit 2 ENCODES a protein that exhibits glucose-6-phosphatase activity (ortholog); INVOLVED IN glucose homeostasis (ortholog); regulation of insulin secretion (ortholog); ASSOCIATED WITH type 1 diabetes mellitus (ortholog); FOUND IN endoplasmic reticulum (ortholog) 5 46537055 46543944 + 22301074;30032202 116900830 MODEL JAAIVD010000023;XM_032902533 XP_032758424 glucose-6-phosphatase 2 protein-coding 625893883 Tlr5 toll like receptor 5 ENCODES a protein that exhibits interleukin-1 receptor binding (ortholog); pattern recognition receptor activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to mechanical stimulus (ortholog); male gonad development (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); alcohol use disorder (ortholog); ankylosing spondylitis (ortholog); FOUND IN plasma membrane (ortholog) 10 61258393 61264086 + 22301074;30032202 116911353 MODEL JAAIVD010000005;XM_032915273 XP_032771164 toll-like receptor 5 protein-coding 625893889 Chgb chromogranin B ASSOCIATED WITH prostate cancer (ortholog); FOUND IN secretory granule (ortholog) 5 112487262 112500610 + 22301074;30032202 116902006 MODEL JAAIVD010000023;XM_032904271 XP_032760162 secretogranin-1 protein-coding 625893898 Churc1 churchill domain containing 1 7 90901382 90916168 + 22301074;30032202 116905190 MODEL JAAIVD010000026;XM_032907981 XP_032763872 protein Churchill protein-coding 625893906 LOC116887904 60S acidic ribosomal protein P1-like X 53220823 53221173 + 22301074;30032202 116887904 MODEL JAAIVD010000014;XM_032889378 XP_032745269 protein-coding 625893909 Mansc1 MANSC domain containing 1 6 14823384 14842045 + 116903174 MODEL JAAIVD010000024;XM_032905545 XP_032761436 MANSC domain-containing protein 1 protein-coding 625893917 Hnrnpdl heterogeneous nuclear ribonucleoprotein D like ENCODES a protein that exhibits double-stranded DNA binding (ortholog); poly(A) binding (ortholog); poly(G) binding (ortholog); INVOLVED IN regulation of gene expression (ortholog); ASSOCIATED WITH autosomal dominant limb-girdle muscular dystrophy type 3 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); synapse (ortholog) 11 10280500 10286035 - 30032202 116912892 MODEL JAAIVD010000006;XM_032917148;XM_032917149;XM_032917150;XR_004389486;XR_004389487 XP_032773039;XP_032773040;XP_032773041 heterogeneous nuclear ribonucleoprotein D-like protein-coding 625893937 LOC116886935 heat shock cognate 71 kDa protein-like 18 23134908 23136806 + 116886935 MODEL JAAIVD010000013 pseudo 625893938 LOC116898943 Down syndrome cell adhesion molecule homolog 4 48016397 48078283 + 30032202 116898943 MODEL JAAIVD010000003;XM_032900360;XM_032900361 XP_032756251;XP_032756252 protein-coding 625893956 Pttg1ip2 PTTG1IP family member 2 6 137705477 137733730 - 30032202 116904472 MODEL JAAIVD010000024;XM_032907281 XP_032763172 uncharacterized protein LOC116904472 protein-coding 625893965 Ccn6 cellular communication network factor 6 INVOLVED IN negative regulation of angiogenesis (ortholog); negative regulation of cell population proliferation (ortholog); regulation of mitochondrial membrane potential (ortholog); ASSOCIATED WITH arthropathy (ortholog); breast metaplastic carcinoma (ortholog); genetic disease (ortholog); FOUND IN extracellular region (ortholog); mitochondrion (ortholog) 18 38960865 38969974 - 22301074;30032202 116886974 MODEL JAAIVD010000013;XM_032888465 XP_032744356 protein-coding 625893972 Morc1 MORC family CW-type zinc finger 1 INVOLVED IN behavioral fear response (ortholog); epigenetic programing of male pronucleus (ortholog); epigenetic regulation of gene expression (ortholog); ASSOCIATED WITH melancholic depression (ortholog); FOUND IN nucleus (ortholog) 4 32991404 33164860 + 22301074;30032202 116897899 MODEL JAAIVD010000003;XM_032899303 XP_032755194 MORC family CW-type zinc finger protein 1 protein-coding 625894003 LOC116899931 U2 spliceosomal RNA 4 145805407 145805597 + 116899931 MODEL JAAIVD010000003;XR_004387899 snrna 625894006 LOC116900328 olfactory receptor 10AG1-like 5 64511008 64517382 + 22301074 116900328 MODEL JAAIVD010000023;XM_032902084;XM_032902085 XP_032757975;XP_032757976 protein-coding 625894014 LOC116912947 small nucleolar RNA SNORD58 11 7051636 7051701 + 116912947 MODEL JAAIVD010000006;XR_004389515 snorna 625894017 LOC116886641 optic atrophy 3 protein homolog 17 19541405 19541922 + 116886641 MODEL JAAIVD010000011 pseudo 625894018 LOC116895121 U4 spliceosomal RNA 2 84935383 84935466 - 116895121 MODEL JAAIVD010000001 pseudo 625894019 Eny2 ENY2 transcription and export complex 2 subunit ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN negative regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); poly(A)+ mRNA export from nucleus (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN DUBm complex (ortholog); nuclear pore nuclear basket (ortholog); SAGA complex (ortholog) 1 218863462 218873133 + 22301074;30032202 116911172 MODEL JAAIVD010000025;XM_032915037;XM_032915044 XP_032770928;XP_032770935 transcription and mRNA export factor ENY2 protein-coding 625894031 Fermt3 FERM domain containing kindlin 3 ENCODES a protein that exhibits integrin binding (ortholog); lipid binding (ortholog); INVOLVED IN integrin activation (ortholog); integrin-mediated signaling pathway (ortholog); leukocyte cell-cell adhesion (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); blood platelet disease (ortholog); genetic disease (ortholog); FOUND IN podosome (ortholog) 2 778000 796608 + 22301074;30032202 116894806 MODEL JAAIVD010000001;XM_032896470;XM_032896471 XP_032752361;XP_032752362 fermitin family homolog 3;fermitin family member 3 protein-coding 625894054 Cdc42bpg CDC42 binding protein kinase gamma ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN protein phosphorylation (ortholog); FOUND IN cell leading edge (ortholog); cytosol (ortholog) 2 1362195 1381405 - 22301074;30032202 116890664 MODEL JAAIVD010000001;XM_032891064;XM_032891065;XM_032891066;XM_032891067;XM_032891068;XM_032891069;XM_032891070 XP_032746955;XP_032746956;XP_032746957;XP_032746958;XP_032746959;XP_032746960;XP_032746961 serine/threonine-protein kinase MRCK gamma protein-coding 625894110 LOC116893714 olfactory receptor 5B3-like 2 13452514 13453449 + 22301074;30032202 116893714 MODEL JAAIVD010000001;XM_032895429 XP_032751320 protein-coding 625894114 LOC116900158 elongin-B-like 5 24905562 24905861 - 30032202 116900158 MODEL JAAIVD010000023;XM_032901924 XP_032757815 protein-coding 625894117 R3hdm1 R3H domain containing 1 10 7476107 7617486 - 22301074 116911088 MODEL JAAIVD010000005;XM_032914912;XM_032914913;XM_032914914;XM_032914915;XM_032914916;XM_032914917;XM_032914918 XP_032770803;XP_032770804;XP_032770805;XP_032770806;XP_032770807;XP_032770808;XP_032770809 R3H domain-containing protein 1 protein-coding 625894165 Tnrc6b trinucleotide repeat containing adaptor 6B INVOLVED IN miRNA-mediated gene silencing by inhibition of translation (ortholog); positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay (ortholog); positive regulation of nuclear-transcribed mRNA poly(A) tail shortening (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Developmental Disabilities (ortholog); Developmental Disease (ortholog) 1 250473606 250680992 + 22301074;30032202 116913825 MODEL JAAIVD010000025;XM_032918140;XM_032918148;XM_032918150;XM_032918152;XM_032918155;XM_032918159;XM_032918161;XM_032918165 XP_032774031;XP_032774039;XP_032774041;XP_032774043;XP_032774046;XP_032774050;XP_032774052;XP_032774056 trinucleotide repeat-containing gene 6B protein protein-coding 625894209 LOC116892759 olfactory receptor 10A3-like 2 182582116 182583116 + 22301074 116892759 MODEL JAAIVD010000001;XM_032894637 XP_032750528 protein-coding 625894212 LOC116905975 ESF1 homolog 7 22849115 22852154 + 22301074;30032202 116905975 MODEL JAAIVD010000026;XM_032908986 XP_032764877 protein-coding 625894218 Bivm basic, immunoglobulin-like variable motif containing FOUND IN nucleoplasm (ortholog) 4 120178521 120214113 + 30032202 116899350 MODEL JAAIVD010000003;XM_032901045;XM_032901046;XM_032901048;XM_032901049;XM_032901050;XM_032901051;XM_032901052;XM_032901053 XP_032756936;XP_032756937;XP_032756939;XP_032756940;XP_032756941;XP_032756942;XP_032756943;XP_032756944 basic immunoglobulin-like variable motif-containing protein protein-coding 625894248 Nptn neuroplastin ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); transmembrane transporter binding (ortholog); type 1 fibroblast growth factor receptor binding (ortholog); INVOLVED IN excitatory synapse assembly (ortholog); homophilic cell-cell adhesion (ortholog); intracellular calcium ion homeostasis (ortholog); ASSOCIATED WITH Developmental Disease (ortholog); hypertension (ortholog); Myocardial Ischemia (ortholog); FOUND IN cell surface (ortholog); dendrite (ortholog); GABA-ergic synapse (ortholog) 8 52453984 52520245 + 30032202 116906759 MODEL JAAIVD010000027;XM_032909593;XM_032909594;XM_032909595;XM_032909596 XP_032765484;XP_032765485;XP_032765486;XP_032765487 protein-coding 625894275 LOC116888621 nuclear RNA export factor 2-like X 87242427 87262750 - 22301074;30032202 116888621 MODEL JAAIVD010000014;XM_032889918 XP_032745809 protein-coding 625894300 Mrpl37 mitochondrial ribosomal protein L37 ASSOCIATED WITH COVID-19 (ortholog); FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 1 47746935 47757384 + 22301074;30032202 116899325 MODEL JAAIVD010000025;XM_032901017 XP_032756908 39S ribosomal protein L37, mitochondrial protein-coding 625894311 LOC116905667 40S ribosomal protein S20-like 7 47264054 47264459 - 22301074;30032202 116905667 MODEL JAAIVD010000026;XM_032908651 XP_032764542 protein-coding 625894315 Vmp1 vacuole membrane protein 1 ENCODES a protein that exhibits phospholipid scramblase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagosome membrane docking (ortholog); autophagy (ortholog); ASSOCIATED WITH Monoclonal B-Cell Lymphocytosis (ortholog); FOUND IN autophagosome membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 9 84092708 84191417 + 30032202 116910421 MODEL JAAIVD010000002;XM_032914263;XM_032914264;XM_032914265 XP_032770154;XP_032770155;XP_032770156 protein-coding 625894337 LOC116900348 olfactory receptor 5W2-like 5 69031871 69039848 - 22301074;30032202 116900348 MODEL JAAIVD010000023;XM_032902101;XM_032902102 XP_032757992;XP_032757993 protein-coding 625894344 LOC116886963 double homeobox protein 4-like protein 4 18 34540080 34541298 + 22301074 116886963 MODEL JAAIVD010000013;XM_032888458 XP_032744349 protein-coding 625894348 Prdm8 PR/SET domain 8 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K9 methyltransferase activity (ortholog); histone methyltransferase activity (ortholog); INVOLVED IN central nervous system projection neuron axonogenesis (ortholog); corpus callosum morphogenesis (ortholog); corticospinal tract morphogenesis (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH COVID-19 (ortholog); progressive myoclonus epilepsy (ortholog); progressive myoclonus epilepsy 10 (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 11 8432999 8453046 + 22301074;30032202 116912531 MODEL JAAIVD010000006;XM_032916632;XM_032916633;XM_032916634;XM_032916635 XP_032772523;XP_032772524;XP_032772525;XP_032772526 PR domain zinc finger protein 8 protein-coding 625894365 Rab3d RAB3D, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GTP-dependent protein binding (ortholog); myosin V binding (ortholog); INVOLVED IN bone resorption (ortholog); peptidyl-cysteine methylation (ortholog); positive regulation of regulated secretory pathway (ortholog); FOUND IN cytoplasmic microtubule (ortholog); secretory vesicle (ortholog); zymogen granule (ortholog) 8 18159866 18169589 - 22301074;30032202 116906572 MODEL JAAIVD010000027;XM_032909291;XM_032909292 XP_032765182;XP_032765183 ras-related protein Rab-3D protein-coding 625894378 Ak7 adenylate kinase 7 ENCODES a protein that exhibits AMP kinase activity (ortholog); dCMP kinase activity (ortholog); nucleoside diphosphate kinase activity (ortholog); INVOLVED IN axoneme assembly (ortholog); brain development (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ASSOCIATED WITH hydrocephalus (ortholog); primary ciliary dyskinesia (ortholog); spermatogenic failure 27 (ortholog); FOUND IN cytosol (ortholog); sperm principal piece (ortholog) 7 123365779 123433946 + 22301074;30032202 116905442 MODEL JAAIVD010000026;XM_032908386 XP_032764277 protein-coding 625894400 Gvqw3 GVQW motif containing 3 2 96976421 96977803 - 116893954 MODEL JAAIVD010000001;XM_032895671 XP_032751562 protein GVQW3 protein-coding 625894405 Phf2 PHD finger protein 2 ENCODES a protein that exhibits histone H3K4me3 reader activity (ortholog); histone H3K9 demethylase activity (ortholog); histone H4K20 demethylase activity (ortholog); INVOLVED IN negative regulation of rDNA heterochromatin formation (ortholog); protein demethylation (ortholog); transcription initiation-coupled chromatin remodeling (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Neurodevelopmental Disorders (ortholog); prostate cancer (ortholog); FOUND IN kinetochore (ortholog); nucleolus (ortholog) 14 67788461 67856785 - 30032202 116883363 MODEL JAAIVD010000009;XM_032884451 XP_032740342 lysine-specific demethylase PHF2 protein-coding 625894431 LOC116885250 oogenesin-3-like 16 43302100 43302657 + 30032202 116885250 MODEL JAAIVD010000004;XM_032886490 XP_032742381 protein-coding 625894434 Trnam-cau transfer RNA methionine (anticodon CAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41805643 41805714 - 116884168 MODEL JAAIVD010000009 trna 625894435 LOC116885208 uncharacterized LOC116885208 16 16815720 16817460 + 116885208 MODEL JAAIVD010000004;XR_004385995 ncrna 625894440 Ino80c INO80 complex subunit C INVOLVED IN chromatin remodeling (ortholog); positive regulation of DNA repair (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; FOUND IN fibrillar center (ortholog); Ino80 complex (ortholog); MLL1 complex (ortholog) 15 19732596 19747361 + 30032202 116884617 MODEL JAAIVD010000010;XM_032885758 XP_032741649 protein-coding 625894449 Pih1d1 PIH1 domain containing 1 ENCODES a protein that exhibits ATPase binding (ortholog); histone binding (ortholog); histone reader activity (ortholog); INVOLVED IN box C/D snoRNP assembly (ortholog); chromatin remodeling (ortholog); epithelial cell differentiation (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleus (ortholog) 2 154382218 154387788 - 30032202 116892164 MODEL JAAIVD010000001;XM_032893660;XM_032893661 XP_032749551;XP_032749552 PIH1 domain-containing protein 1 protein-coding 625894466 Wnt6 Wnt family member 6 INVOLVED IN axis specification (ortholog); branching involved in ureteric bud morphogenesis (ortholog); epithelial-mesenchymal cell signaling (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN cell surface (ortholog); extracellular matrix (ortholog) 4 148194880 148208083 + 22301074;30032202 116898228 MODEL JAAIVD010000003;XM_032899583 XP_032755474 protein Wnt-6 protein-coding 625894474 Mdm2 MDM2 proto-oncogene ENCODES a protein that exhibits 5S rRNA binding (ortholog); disordered domain specific binding (ortholog); enzyme binding (ortholog); INVOLVED IN amyloid fibril formation (ortholog); apoptotic process (ortholog); atrial septum development (ortholog); PARTICIPATES IN altered p53 signaling pathway; p53 signaling pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); acute myeloid leukemia (ortholog); biliary tract benign neoplasm (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) 1 195794363 195816889 - 22301074;30032202 116909305 MODEL JAAIVD010000025;XM_032912848 XP_032768739 E3 ubiquitin-protein ligase Mdm2 protein-coding 625894490 Lrrc17 leucine rich repeat containing 17 INVOLVED IN bone marrow development (ortholog); negative regulation of osteoclast differentiation (ortholog); osteoblast differentiation (ortholog); FOUND IN extracellular region (ortholog) 6 150842165 150855900 + 22301074 116904174 MODEL JAAIVD010000024;XM_032907077 XP_032762968 leucine-rich repeat-containing protein 17 protein-coding 625894497 Btaf1 B-TFIID TATA-box binding protein associated factor 1 ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); transcription coregulator activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); FOUND IN nucleoplasm (ortholog) 2 36808989 36894926 - 22301074;30032202 116891134 MODEL JAAIVD010000001;XM_032891868 XP_032747759 TATA-binding protein-associated factor 172 protein-coding 625894539 LOC116886762 5S ribosomal RNA 17 43138212 43138330 - 116886762 MODEL JAAIVD010000011;XR_004386163 rrna 625894542 Pgap4 post-GPI attachment to proteins GalNAc transferase 4 ENCODES a protein that exhibits glycosyltransferase activity (ortholog); INVOLVED IN GPI anchor biosynthetic process (ortholog); FOUND IN Golgi membrane (ortholog) 7 57296478 57310830 + 30032202 116904999 MODEL JAAIVD010000026;XM_032907682 XP_032763573 transmembrane protein 246 protein-coding 625894548 Crisp2 cysteine rich secretory protein 2 INVOLVED IN cell-cell adhesion (ortholog); ASSOCIATED WITH megacolon (ortholog) 4 95079917 95104297 + 22301074;30032202 116898090 MODEL JAAIVD010000003;XM_032899476 XP_032755367 cysteine-rich secretory protein 2 protein-coding 625894562 LOC116908964 olfactory receptor 1468-like 9 44652770 44653705 - 22301074;30032202 116908964 MODEL JAAIVD010000002;XM_032912425 XP_032768316 protein-coding 625894565 LOC116890396 U6 spliceosomal RNA 1 266278995 266279098 + 116890396 MODEL JAAIVD010000025;XR_004386599 snrna 625894568 LOC116895253 serine protease inhibitor Kazal-type 6 3 226200 237969 + 22301074 116895253 MODEL JAAIVD010000012;XM_032896571 XP_032752462 protein-coding 625894575 LOC116914229 beta-defensin 15 13 65003961 65006602 - 22301074 116914229 MODEL JAAIVD010000008;XM_032918424 XP_032774315 protein-coding 625894579 LOC116894955 small nucleolar RNA SNORD101 2 209857861 209857934 - 116894955 MODEL JAAIVD010000001;XR_004387149 snorna 625894582 LOC116890065 vomeronasal type-1 receptor 4-like 1 214709467 214710435 - 22301074;30032202 116890065 MODEL JAAIVD010000025;XM_032890830 XP_032746721 protein-coding 625894586 LOC116893425 vomeronasal type-1 receptor 4-like 2 175150218 175151077 - 116893425 MODEL JAAIVD010000001 pseudo 625894587 LOC116907966 uncharacterized LOC116907966 8 112458974 112466854 + 116907966 MODEL JAAIVD010000027;XR_004388858 ncrna 625894591 Zfr zinc finger RNA binding protein ASSOCIATED WITH hereditary spastic paraplegia (ortholog); intellectual disability (ortholog); Neoplasm Invasiveness (ortholog) 3 168911447 168973913 - 22301074;30032202 116897119 MODEL JAAIVD010000012;XM_032898764;XM_032898766;XM_032898767;XM_032898768;XM_032898769;XR_004387399 XP_032754655;XP_032754657;XP_032754658;XP_032754659;XP_032754660 zinc finger RNA-binding protein protein-coding 625894625 Oprm1 opioid receptor mu 1 ENCODES a protein that exhibits beta-endorphin receptor activity (ortholog); G protein-coupled opioid receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); adenylate cyclase-activating dopamine receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH AIDS Dementia Complex (ortholog); alcohol dependence (ortholog); amphetamine abuse (ortholog); FOUND IN dendrite (ortholog); dendrite cytoplasm (ortholog); dendrite membrane (ortholog) 2 196129277 196205035 - 22301074;30032202 116892871 MODEL JAAIVD010000001;XM_032894776;XM_032894777;XM_032894778;XM_032894779 XP_032750667;XP_032750668;XP_032750669;XP_032750670 mu-type opioid receptor protein-coding 625894646 LOC116892856 uncharacterized LOC116892856 2 192759148 192769252 - 116892856 MODEL JAAIVD010000001;XR_004386979 ncrna 625894653 LOC116884530 60S ribosomal protein L27a-like 15 27825030 27825529 + 22301074;30032202 116884530 MODEL JAAIVD010000010;XM_032885665 XP_032741556 protein-coding 625894658 Tars2 threonyl-tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits aminoacyl-tRNA deacylase activity (ortholog); protein homodimerization activity (ortholog); threonine-tRNA ligase activity (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 21 (ortholog); Failure to Thrive (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) 3 61522992 61538848 + 22301074;30032202 116896538 MODEL JAAIVD010000012;XM_032897724;XM_032897725 XP_032753615;XP_032753616 threonine--tRNA ligase, mitochondrial protein-coding 625894681 LOC116906249 immunoglobulin heavy variable 3-73-like 7 122296616 122297179 - 116906249 MODEL JAAIVD010000026 pseudo 625894682 Znf23 zinc finger protein 23 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog) 17 29785785 29799336 + 30032202 116886115 MODEL JAAIVD010000011;XM_032887450;XM_032887451;XM_032887452;XM_032887453 XP_032743341;XP_032743342;XP_032743343;XP_032743344 protein-coding 625894700 Iqce IQ motif containing E INVOLVED IN limb morphogenesis (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); protein localization to motile cilium (ortholog); ASSOCIATED WITH brachydactyly (ortholog); genetic disease (ortholog); Postaxial Polydactyly, Type A1 (ortholog); FOUND IN ciliary membrane (ortholog); cytoplasmic side of plasma membrane (ortholog); plasma membrane protein complex (ortholog) 16 12502475 12541255 + 22301074 116885474 MODEL JAAIVD010000004;XM_032886755;XM_032886756;XM_032886757;XM_032886758;XM_032886759;XM_032886760;XM_032886761 XP_032742646;XP_032742647;XP_032742648;XP_032742649;XP_032742650;XP_032742651;XP_032742652 IQ domain-containing protein E protein-coding 625894745 LOC116902718 cytochrome c oxidase subunit 7C, mitochondrial-like 6 24539133 24539371 + 116902718 MODEL JAAIVD010000024 pseudo 625894746 LOC116915143 small nucleolar RNA SNORA17 13 35267890 35267994 - 116915143 MODEL JAAIVD010000008 pseudo 625894747 Zdhhc20 zDHHC palmitoyltransferase 20 ENCODES a protein that exhibits palmitoyltransferase activity (ortholog); protein-cysteine S-palmitoyltransferase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN DNA damage response (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); Golgi membrane (ortholog); nucleus (ortholog) 12 66938465 66995828 + 22301074 116914048 MODEL JAAIVD010000007;XM_032918326;XM_032918327;XM_032918328;XM_032918330 XP_032774217;XP_032774218;XP_032774219;XP_032774221 palmitoyltransferase ZDHHC20;zinc finger DHHC-type palmitoyltransferase 20 protein-coding 625894778 LOC116902487 U6 spliceosomal RNA 5 31027379 31027483 - 116902487 MODEL JAAIVD010000023;XR_004388103 snrna 625894781 LOC116903044 taste receptor type 2 member 106 6 16684089 16685012 + 22301074;30032202 116903044 MODEL JAAIVD010000024;XM_032905346 XP_032761237 protein-coding 625894784 LOC116899331 uncharacterized LOC116899331 4 118432403 118453463 + 116899331 MODEL JAAIVD010000003;XR_004387705 ncrna 625894790 Ccna1 cyclin A1 PARTICIPATES IN G1/S transition pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cyclin A1-CDK2 complex (ortholog); microtubule cytoskeleton (ortholog) 3 99337155 99383198 + 30032202 116896865 MODEL JAAIVD010000012;XM_032898387;XM_032898388;XM_032898389;XM_032898390;XM_032898391;XM_032898393;XM_032898394 XP_032754278;XP_032754279;XP_032754280;XP_032754281;XP_032754282;XP_032754284;XP_032754285 cyclin-A1 protein-coding 625894819 LOC116902960 zinc finger matrin-type protein 1-like 6 74312250 74313076 + 116902960 MODEL JAAIVD010000024;XM_032905285 XP_032761176 protein-coding 625894823 LOC116911481 olfactory receptor 10J1-like 10 52305916 52306848 + 22301074 116911481 MODEL JAAIVD010000005;XM_032915464 XP_032771355 protein-coding 625894826 LOC116913375 developmental pluripotency-associated protein 3-like 12 69177290 69177826 + 116913375 MODEL JAAIVD010000007 pseudo 625894827 Tmem200b transmembrane protein 200B 1 26330762 26333102 - 116895695 MODEL JAAIVD010000025;XM_032896896 XP_032752787 protein-coding 625894832 Kcnj14 potassium inwardly rectifying channel subfamily J member 14 ENCODES a protein that exhibits inward rectifier potassium channel activity (ortholog); PARTICIPATES IN neuron-to-neuron signaling pathway via the chemical synapse; FOUND IN dendrite (ortholog); neuronal cell body (ortholog) 2 153691728 153699793 + 22301074;30032202 116892123 MODEL JAAIVD010000001;XM_032893606 XP_032749497 ATP-sensitive inward rectifier potassium channel 14 protein-coding 625894839 Prrt4 proline rich transmembrane protein 4 ASSOCIATED WITH COVID-19 (ortholog) 6 110384228 110394624 + 116904021 MODEL JAAIVD010000024;XM_032906850;XM_032906851 XP_032762741;XP_032762742 proline-rich transmembrane protein 4 protein-coding 625894852 Nabp2 nucleic acid binding protein 2 ENCODES a protein that exhibits C-rich strand telomeric DNA binding (ortholog); DNA polymerase binding (ortholog); G-rich strand telomeric DNA binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); double-strand break repair via homologous recombination (ortholog); FOUND IN chromosome, telomeric region (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 155871332 155878162 - 30032202 116906018 MODEL JAAIVD010000025;XM_032909072;XM_032909080;XM_032909090;XM_032909092;XM_032909095 XP_032764963;XP_032764971;XP_032764981;XP_032764983;XP_032764986 SOSS complex subunit B1 protein-coding 625894873 Vps39 VPS39 subunit of HOPS complex ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN autophagosome-lysosome fusion (ortholog); autophagy (ortholog); endocytic recycling (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); cerebellar ataxia (ortholog); schizophrenia (ortholog); FOUND IN AP-3 adaptor complex (ortholog); HOPS complex (ortholog); late endosome (ortholog) 5 98450919 98488966 - 22301074;30032202 116901832 MODEL JAAIVD010000023;XM_032903996;XM_032903997;XM_032903998 XP_032759887;XP_032759888;XP_032759889 vam6/Vps39-like protein protein-coding 625894906 Snx24 sorting nexin 24 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); phosphatidylinositol-5-phosphate binding (ortholog) 15 78370034 78517179 - 30032202 116884293 MODEL JAAIVD010000010;XM_032885391;XM_032885392 XP_032741282;XP_032741283 sorting nexin-24 protein-coding 625894922 Aif1l allograft inflammatory factor 1 like ENCODES a protein that exhibits actin filament binding (ortholog); ASSOCIATED WITH breast cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); focal adhesion (ortholog) 5 3667291 3691200 - 22301074;30032202 116901160 MODEL JAAIVD010000023;XM_032902804 XP_032758695 allograft inflammatory factor 1-like protein-coding 625894932 Capn5 calpain 5 INVOLVED IN granulosa cell differentiation (ortholog); luteinization (ortholog); ovarian follicle development (ortholog); ASSOCIATED WITH cone-rod dystrophy (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN cell surface (ortholog); synapse (ortholog) 2 96406687 96461594 - 22301074;30032202 116891709 MODEL JAAIVD010000001;XM_032892978;XM_032892980 XP_032748869;XP_032748871 calpain-5 protein-coding 625894952 Clpp caseinolytic mitochondrial matrix peptidase proteolytic subunit ENCODES a protein that exhibits endopeptidase activity (ortholog); identical protein binding (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN membrane protein proteolysis (ortholog); protein catabolic process (ortholog); proteolysis (ortholog); ASSOCIATED WITH genetic disease (ortholog); Perrault syndrome (ortholog); Perrault Syndrome 1 (ortholog); FOUND IN endopeptidase Clp complex (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 4 88371228 88377067 + 22301074;30032202 116899203 MODEL JAAIVD010000003;XM_032900792 XP_032756683 ATP-dependent Clp protease proteolytic subunit, mitochondrial protein-coding 625894962 Lsg1 large 60S subunit nuclear export GTPase 1 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN nuclear export (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); FOUND IN Cajal body (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 4 15492735 15515733 - 22301074;30032202 116898749 MODEL JAAIVD010000003;XM_032900067 XP_032755958 large subunit GTPase 1 homolog protein-coding 625894980 Dnajc17 DnaJ heat shock protein family (Hsp40) member C17 INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 5 97350849 97384438 - 22301074;30032202 116901802 MODEL JAAIVD010000023;XM_032903961 XP_032759852 dnaJ homolog subfamily C member 17 protein-coding 625894996 Gpr173 G protein-coupled receptor 173 ENCODES a protein that exhibits gonadotropin-releasing hormone receptor activity (ortholog); INVOLVED IN negative regulation of neuron migration (ortholog) X 13489911 13494016 - 22301074;30032202 116888344 MODEL JAAIVD010000014;XM_032889615 XP_032745506 probable G-protein coupled receptor 173 protein-coding 625895002 LOC116914950 ral guanine nucleotide dissociation stimulator-like 13 11629057 11630630 - 116914950 MODEL JAAIVD010000008;XM_032919369 XP_032775260 protein-coding 625895007 LOC116886881 60S ribosomal protein L36-like 18 4606149 4606467 + 116886881 MODEL JAAIVD010000013 pseudo 625895008 LOC116913175 phosphate carrier protein, mitochondrial-like 12 56362224 56363543 - 116913175 MODEL JAAIVD010000007 pseudo 625895009 LOC116893052 glutathione S-transferase P 1-like 2 32755627 32756259 - 116893052 MODEL JAAIVD010000001 pseudo 625895010 LOC116897952 olfactory receptor 5AC1-like 4 43135243 43136175 - 22301074;30032202 116897952 MODEL JAAIVD010000003;XM_032899351 XP_032755242 protein-coding 625895014 LOC116893672 olfactory receptor 4D11-like 2 12207208 12208143 - 22301074 116893672 MODEL JAAIVD010000001;XM_032895388 XP_032751279 protein-coding 625895017 LOC116899763 U6 spliceosomal RNA 4 112056420 112056526 - 116899763 MODEL JAAIVD010000003;XR_004387777 snrna 625895020 Zcchc8 zinc finger CCHC-type containing 8 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN co-transcriptional lncRNA 3' end processing, cleavage and polyadenylation pathway (ortholog); mRNA 3'-end processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); aplastic anemia (ortholog); dyskeratosis congenita (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 16 30133494 30155309 + 22301074;30032202 116885345 MODEL JAAIVD010000004;XM_032886620 XP_032742511 zinc finger CCHC domain-containing protein 8 protein-coding 625895038 Eif2a eukaryotic translation initiation factor 2A ENCODES a protein that exhibits ribosome binding (ortholog); translation initiation factor activity (ortholog); tRNA binding (ortholog); INVOLVED IN positive regulation of signal transduction (ortholog); protein phosphorylation (ortholog); regulation of translation (ortholog); PARTICIPATES IN ceramide signaling pathway; endoplasmic reticulum stress - the unfolded protein response pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH borna disease (ortholog); dystonia 33 (ortholog); Marinesco-Sjogren syndrome (ortholog); FOUND IN cytoplasm (ortholog); eukaryotic translation initiation factor 2 complex (ortholog) 3 97039009 97069906 + 22301074;30032202 116896851 MODEL JAAIVD010000012;XM_032898359;XM_032898360;XM_032898361 XP_032754250;XP_032754251;XP_032754252 protein-coding 625895063 Trnan-guu transfer RNA asparagine (anticodon GUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 56681250 56681323 + 116910811 MODEL JAAIVD010000002 trna 625895064 Zcchc4 zinc finger CCHC-type containing 4 ENCODES a protein that exhibits rRNA (adenine-N6-)-methyltransferase activity (ortholog); S-adenosyl-L-methionine binding (ortholog); zinc ion binding (ortholog); INVOLVED IN positive regulation of translation (ortholog); rRNA methylation (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog) 11 53329153 53369542 - 22301074;30032202 116912336 MODEL JAAIVD010000006;XM_032916381;XM_032916382;XM_032916383 XP_032772272;XP_032772273;XP_032772274 rRNA N6-adenosine-methyltransferase ZCCHC4 protein-coding 625895085 Sh3glb1 SH3 domain containing GRB2 like, endophilin B1 ENCODES a protein that exhibits fatty acid binding (ortholog); identical protein binding (ortholog); lysophosphatidic acid acyltransferase activity (ortholog); INVOLVED IN 'de novo' post-translational protein folding (ortholog); autophagic cell death (ortholog); cellular response to amino acid starvation (ortholog); PARTICIPATES IN mitochondria fission pathway; FOUND IN autophagosome membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) 3 16006364 16040244 + 22301074;30032202 116896187 MODEL JAAIVD010000012;XM_032897227;XM_032897228;XM_032897229;XM_032897230;XM_032897231;XM_032897232 XP_032753118;XP_032753119;XP_032753120;XP_032753121;XP_032753122;XP_032753123 endophilin-B1 protein-coding 625895117 LOC116887024 T-complex protein 1 subunit eta-like 1 32345565 32347152 - 116887024 MODEL JAAIVD010000025 pseudo 625895118 Vmac vimentin type intermediate filament associated coiled-coil protein FOUND IN type III intermediate filament (ortholog) 4 88088898 88091774 - 116899193 MODEL JAAIVD010000003;XM_032900777;XM_032900778 XP_032756668;XP_032756669 vimentin-type intermediate filament-associated coiled-coil protein protein-coding 625895127 Homer2 homer scaffold protein 2 ENCODES a protein that exhibits actin binding (ortholog); G protein-coupled glutamate receptor binding (ortholog); glutamate receptor binding (ortholog); INVOLVED IN behavioral response to cocaine (ortholog); calcium-mediated signaling (ortholog); cellular response to L-glutamate (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 68 (ortholog); cocaine abuse (ortholog); cocaine dependence (ortholog); FOUND IN apical part of cell (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 118558297 118650671 + 22301074;30032202 116891900 MODEL JAAIVD010000001;XM_032893316;XM_032893317 XP_032749207;XP_032749208 homer protein homolog 2 protein-coding 625895144 Unk unk zinc finger ENCODES a protein that exhibits mRNA CDS binding (ortholog); ribosome binding (ortholog); INVOLVED IN cell morphogenesis involved in neuron differentiation (ortholog); in utero embryonic development (ortholog); negative regulation of cytoplasmic translation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 9 67997726 68029020 - 22301074;30032202 116909103 MODEL JAAIVD010000002;XM_032912577;XM_032912578 XP_032768468;XP_032768469 RING finger protein unkempt homolog protein-coding 625895168 LOC116909473 olfactory receptor 2T29-like 9 39514979 39515941 - 22301074 116909473 MODEL JAAIVD010000002;XM_032913063 XP_032768954 protein-coding 625895171 H1-1 H1.1 linker histone, cluster member ENCODES a protein that exhibits chromatin DNA binding (ortholog); heparin binding (ortholog); structural constituent of chromatin (ortholog); INVOLVED IN chromosome condensation (ortholog); positive regulation of receptor-mediated endocytosis (ortholog); FOUND IN cell surface (ortholog); chromatin (ortholog); euchromatin (ortholog) 14 42758365 42759167 + 22301074 116883547 MODEL JAAIVD010000009;XM_032884718 XP_032740609 histone H1.1 protein-coding 625895176 Zpr1 ZPR1 zinc finger ENCODES a protein that exhibits receptor tyrosine kinase binding (ortholog); translation initiation factor binding (ortholog); zinc ion binding (ortholog); INVOLVED IN apoptotic process involved in development (ortholog); axon development (ortholog); Cajal body organization (ortholog); ASSOCIATED WITH GROWTH RESTRICTION, HYPOPLASTIC KIDNEYS, ALOPECIA, AND DISTINCTIVE FACIES (ortholog); FOUND IN axon (ortholog); Cajal body (ortholog); cytoplasm (ortholog) 8 40786391 40794433 + 22301074;30032202 116906798 MODEL JAAIVD010000027;XM_032909670;XM_032909671 XP_032765561;XP_032765562 zinc finger protein ZPR1 protein-coding 625895197 Xrra1 X-ray radiation resistance associated 1 INVOLVED IN response to X-ray (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 2 98137436 98202364 + 22301074;30032202 116891731 MODEL JAAIVD010000001;XM_032893028;XM_032893029;XM_032893030 XP_032748919;XP_032748920;XP_032748921 X-ray radiation resistance-associated protein 1 protein-coding 625895225 Kpna5 karyopherin subunit alpha 5 FOUND IN cytosol (ortholog) 18 28704925 28764811 + 22301074;30032202 116886880 MODEL JAAIVD010000013;XM_032888335;XM_032888336 XP_032744226;XP_032744227 importin subunit alpha-6 protein-coding 625895245 LOC116884148 small nucleolar RNA SNORA32 14 5705102 5705202 + 116884148 MODEL JAAIVD010000009 pseudo 625895246 LOC116884142 small nucleolar RNA SNORA67 14 48358200 48358341 - 116884142 MODEL JAAIVD010000009;XR_004385860 snorna 625895249 LOC116885981 U6 spliceosomal RNA 16 18063265 18063370 + 116885981 MODEL JAAIVD010000004;XR_004386060 snrna 625895252 LOC116897528 small nucleolar RNA SNORA48 3 121560029 121560154 + 116897528 MODEL JAAIVD010000012 pseudo 625895253 Grhpr glyoxylate and hydroxypyruvate reductase ENCODES a protein that exhibits carboxylic acid binding (ortholog); glyoxylate reductase (NADPH) activity (ortholog); hydroxypyruvate reductase (NADH) activity (ortholog); INVOLVED IN dicarboxylic acid metabolic process (ortholog); glyoxylate metabolic process (ortholog); PARTICIPATES IN Leigh disease pathway; primary hyperoxaluria type 2 pathway; pyruvate decarboxylase deficiency pathway; ASSOCIATED WITH COVID-19 (ortholog); familial hypocalciuric hypercalcemia (ortholog); nephrocalcinosis (ortholog); FOUND IN catalytic complex (ortholog); cytoplasm (ortholog); mitochondrion (ortholog) 1 1521819 1531256 - 22301074;30032202 116890849 MODEL JAAIVD010000025;XM_032891395;XM_032891406 XP_032747286;XP_032747297 glyoxylate reductase/hydroxypyruvate reductase protein-coding 625895269 Ttc21a tetratricopeptide repeat domain 21A INVOLVED IN flagellated sperm motility (ortholog); spermatid development (ortholog); ASSOCIATED WITH Asthenozoospermia (ortholog); oligospermia (ortholog); spermatogenic failure 37 (ortholog) 8 111177026 111211894 + 22301074;30032202 116907927 MODEL JAAIVD010000027;XM_032911140 XP_032767031 tetratricopeptide repeat protein 21A protein-coding 625895302 Tnk2 tyrosine kinase non receptor 2 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); identical protein binding (ortholog); protein serine/threonine/tyrosine kinase activity (ortholog); INVOLVED IN phosphorylation (ortholog); positive regulation of peptidyl-tyrosine phosphorylation (ortholog); regulation of clathrin-dependent endocytosis (ortholog); ASSOCIATED WITH Autosomal Recessive Infantile Epilepsy (ortholog); developmental and epileptic encephalopathy (ortholog); epilepsy (ortholog); FOUND IN axon (ortholog); clathrin-coated pit (ortholog); clathrin-coated vesicle (ortholog) 4 17456551 17476637 + 22301074;30032202 116898779 MODEL JAAIVD010000003;XM_032900117 XP_032756008 activated CDC42 kinase 1 protein-coding 625895319 Pih1d2 PIH1 domain containing 2 ENCODES a protein that exhibits small GTPase binding (ortholog) 8 45089558 45097726 + 30032202 116906842 MODEL JAAIVD010000027;XM_032909730;XM_032909731;XM_032909733;XM_032909734 XP_032765621;XP_032765622;XP_032765624;XP_032765625 PIH1 domain-containing protein 2 protein-coding 625895338 Eqtn equatorin INVOLVED IN acrosomal vesicle exocytosis (ortholog); endocytosis (ortholog); fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); FOUND IN acrosomal membrane (ortholog); cytoplasm (ortholog); early endosome (ortholog) 1 57885733 57898278 - 22301074;30032202 116900093 MODEL JAAIVD010000025;XM_032901875 XP_032757766 protein-coding 625895350 LOC116910739 small nucleolar RNA U13 9 39860352 39860456 + 116910739 MODEL JAAIVD010000002;XR_004389253 snorna 625895353 LOC116883886 uncharacterized LOC116883886 14 22614255 22616297 - 116883886 MODEL JAAIVD010000009;XR_004385802 ncrna 625895357 Abcc9 ATP binding cassette subfamily C member 9 ENCODES a protein that exhibits ATPase-coupled monoatomic cation transmembrane transporter activity (ortholog); ATPase-coupled transmembrane transporter activity (ortholog); heterocyclic compound binding (ortholog); INVOLVED IN action potential (ortholog); ATP metabolic process (ortholog); blood circulation (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); breast ductal carcinoma (ortholog); Brugada syndrome (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); inward rectifying potassium channel (ortholog) 6 340885 455653 - 22301074;30032202 116903069 MODEL JAAIVD010000024;XM_032905368 XP_032761259 ATP-binding cassette sub-family C member 9 protein-coding 625895400 LOC116907944 interstitial collagenase B-like 8 3652551 3660811 - 22301074;30032202 116907944 MODEL JAAIVD010000027;XM_032911164 XP_032767055 protein-coding 625895412 Nbeal2 neurobeachin like 2 INVOLVED IN blood coagulation (ortholog); megakaryocyte development (ortholog); platelet alpha granule organization (ortholog); ASSOCIATED WITH genetic disease (ortholog); gray platelet syndrome (ortholog); hemorrhagic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog) 8 101208696 101238772 - 30032202 116907676 MODEL JAAIVD010000027;XM_032910771 XP_032766662 neurobeachin-like protein 2 protein-coding 625895470 Gria2 glutamate ionotropic receptor AMPA type subunit 2 ENCODES a protein that exhibits AMPA glutamate receptor activity (ortholog); amyloid-beta binding (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN AMPA glutamate receptor clustering (ortholog); cellular response to amine stimulus (ortholog); cellular response to brain-derived neurotrophic factor stimulus (ortholog); PARTICIPATES IN N-cadherin signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); allergic rhinitis (ortholog); amphetamine abuse (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); asymmetric synapse (ortholog); axon (ortholog) 3 72735221 72850794 + 22301074;30032202 116896756 MODEL JAAIVD010000012;XM_032898200;XM_032898201;XM_032898202 XP_032754091;XP_032754092;XP_032754093 glutamate receptor 2 protein-coding 625895498 Lysmd1 LysM domain containing 1 FOUND IN nucleoplasm (ortholog) 3 62107970 62115794 - 116896567 MODEL JAAIVD010000012;XM_032897776;XR_004387344 XP_032753667 lysM and putative peptidoglycan-binding domain-containing protein 1 protein-coding 625895508 Nrg3 neuregulin 3 ENCODES a protein that exhibits chemorepellent activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN chemorepulsion involved in interneuron migration from the subpallium to the cortex (ortholog); ERBB4 signaling pathway (ortholog); ERBB4-ERBB4 signaling pathway (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH Hirschsprung's disease (ortholog); schizophrenia (ortholog); FOUND IN extracellular region (ortholog); glutamatergic synapse (ortholog); synapse (ortholog) 13 16891916 17972351 - 30032202 116914966 MODEL JAAIVD010000008;XM_032919377 XP_032775268 pro-neuregulin-3, membrane-bound isoform protein-coding 625895522 Enkd1 enkurin domain containing 1 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); microtubule binding (ortholog); INVOLVED IN establishment of mitotic spindle orientation (ortholog); motile cilium assembly (ortholog); non-motile cilium assembly (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); centriole (ortholog); centrosome (ortholog) 17 25438066 25442444 - 30032202 116886058 MODEL JAAIVD010000011;XM_032887361;XM_032887362;XM_032887363 XP_032743252;XP_032743253;XP_032743254 enkurin domain-containing protein 1 protein-coding 625895540 Sema3f semaphorin 3F ENCODES a protein that exhibits chemorepellent activity (ortholog); INVOLVED IN axon extension involved in axon guidance (ortholog); axon guidance (ortholog); branchiomotor neuron axon guidance (ortholog); ASSOCIATED WITH Endometrial Neoplasms (ortholog); Hearing Loss (ortholog); hypogonadotropic hypogonadism (ortholog); FOUND IN glutamatergic synapse (ortholog) 8 99002083 99029590 - 30032202 116907542 MODEL JAAIVD010000027;XM_032910563 XP_032766454 semaphorin-3F protein-coding 625895564 LOC116914491 zinc finger protein 20-like 13 12010255 12030758 - 30032202 116914491 MODEL JAAIVD010000008;XM_032918803 XP_032774694 protein-coding 625895572 LOC116891714 tubulin alpha-1C chain-like 2 96813947 96815170 + 116891714 MODEL JAAIVD010000001 pseudo 625895573 LOC116893285 E3 ubiquitin/ISG15 ligase TRIM25-like 2 147855083 147991430 + 116893285 MODEL JAAIVD010000001 pseudo 625895574 LOC116893300 mas-related G-protein coupled receptor member B3-like 2 151155670 151156635 + 22301074;30032202 116893300 MODEL JAAIVD010000001;XM_032895128 XP_032751019 protein-coding 625895577 LOC116909433 olfactory receptor 56 9 31784263 31788294 + 22301074 116909433 MODEL JAAIVD010000002;XM_032913008 XP_032768899 protein-coding 625895583 Lvrn laeverin 15 40119006 40186903 - 22301074;30032202 116884556 MODEL JAAIVD010000010;XM_032885696 XP_032741587 aminopeptidase Q protein-coding 625895606 LOC116902519 U7 small nuclear RNA 5 75844015 75844079 + 116902519 MODEL JAAIVD010000023;XR_004388128 snrna 625895609 Ptpn22 protein tyrosine phosphatase non-receptor type 22 ENCODES a protein that exhibits kinase binding (ortholog); phosphatase activity (ortholog); protein tyrosine kinase binding (ortholog); INVOLVED IN cellular response to muramyl dipeptide (ortholog); lipopolysaccharide-mediated signaling pathway (ortholog); negative regulation of autophagy (ortholog); ASSOCIATED WITH Addison's disease (ortholog); alopecia areata (ortholog); Anti-Neutrophil Cytoplasmic Antibody-Associated Vasculitis (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); nucleus (ortholog) 3 54165175 54214052 - 30032202 116896440 MODEL JAAIVD010000012;XM_032897593 XP_032753484 tyrosine-protein phosphatase non-receptor type 22 protein-coding 625895634 Hectd1 HECT domain E3 ubiquitin protein ligase 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN aorta development (ortholog); embryonic placenta development (ortholog); heart valve development (ortholog); ASSOCIATED WITH intellectual disability (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 7 65174787 65263222 - 22301074;30032202 116905037 MODEL JAAIVD010000026;XM_032907719 XP_032763610 E3 ubiquitin-protein ligase HECTD1 protein-coding 625895681 LOC116902776 protein lin-28 homolog A-like 6 75510259 75510887 + 116902776 MODEL JAAIVD010000024 pseudo 625895682 LOC116905911 uncharacterized LOC116905911 7 127048190 127052542 - 116905911 MODEL JAAIVD010000026;XR_004388576 ncrna 625895686 Znf35 zinc finger protein 35 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); sequence-specific DNA binding (ortholog); FOUND IN nucleus (ortholog); perinuclear region of cytoplasm (ortholog) 8 114055402 114065746 + 30032202 116908008 MODEL JAAIVD010000027;XM_032911266 XP_032767157 protein-coding 625895694 Ice1 interactor of little elongation complex ELL subunit 1 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN positive regulation of intracellular protein transport (ortholog); positive regulation of protein-containing complex assembly (ortholog); positive regulation of transcription by RNA polymerase III (ortholog); FOUND IN Cajal body (ortholog); euchromatin (ortholog); histone locus body (ortholog) 2 201973514 202015485 - 116892910 MODEL JAAIVD010000001;XM_032894832 XP_032750723 little elongation complex subunit 1 protein-coding 625895717 Wsb2 WD repeat and SOCS box containing 2 16 36451239 36471951 - 22301074 116885224 MODEL JAAIVD010000004;XM_032886460;XM_032886461 XP_032742351;XP_032742352 WD repeat and SOCS box-containing protein 2 protein-coding 625895733 Anxa2 annexin A2 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); bone sialoprotein binding (ortholog); calcium-dependent phospholipid binding (ortholog); INVOLVED IN angiogenesis (ortholog); body fluid secretion (ortholog); cell adhesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); Cardiomegaly (ortholog); FOUND IN AnxA2-p11 complex (ortholog); basolateral plasma membrane (ortholog); cell cortex (ortholog) 8 63798317 63834514 + 22301074;30032202 116907096 MODEL JAAIVD010000027;XM_032910064 XP_032765955 protein-coding 625895750 LOC116906129 pecanex-like protein 4 7 86819766 86831489 + 116906129 MODEL JAAIVD010000026;XM_032909124 XP_032765015 protein-coding 625895757 Dnal4 dynein axonemal light chain 4 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH mirror movements 3 (ortholog) 18 19970476 19970793 - 22301074;30032202 116887240 MODEL JAAIVD010000013;XM_032888803 XP_032744694 dynein light chain 4, axonemal protein-coding 625895760 Ppie peptidylprolyl isomerase E ENCODES a protein that exhibits mRNA binding (ortholog); peptidyl-prolyl cis-trans isomerase activity (ortholog); poly(A) binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); positive regulation of viral genome replication (ortholog); regulation of DNA-templated transcription (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) 1 35117560 35129427 + 22301074;30032202 116897101 MODEL JAAIVD010000025;XM_032898747;XM_032898753;XM_032898757;XM_032898765;XM_032898774 XP_032754638;XP_032754644;XP_032754648;XP_032754656;XP_032754665 peptidyl-prolyl cis-trans isomerase E protein-coding 625895787 LOC116908626 succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial-like 9 34993940 34994397 - 116908626 MODEL JAAIVD010000002 pseudo 625895788 Aen apoptosis enhancing nuclease ENCODES a protein that exhibits DNA exonuclease activity (ortholog); exonuclease activity (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); response to ionizing radiation (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 2 121345053 121351765 - 22301074;30032202 116891951 MODEL JAAIVD010000001;XM_032893391 XP_032749282 apoptosis-enhancing nuclease protein-coding 625895795 LOC116888721 histidine triad nucleotide-binding protein 1-like X 100504917 100505296 + 116888721 MODEL JAAIVD010000014 pseudo 625895796 Spats1 spermatogenesis associated serine rich 1 4 84417333 84442453 + 116899137 MODEL JAAIVD010000003;XM_032900672;XM_032900673 XP_032756563;XP_032756564 spermatogenesis-associated serine-rich protein 1 protein-coding 625895808 Paqr5 progestin and adipoQ receptor family member 5 8 56257478 56329395 - 22301074;30032202 116907456 MODEL JAAIVD010000027;XM_032910440 XP_032766331 membrane progestin receptor gamma protein-coding 625895820 Znf488 zinc finger protein 488 INVOLVED IN positive regulation of myelination (ortholog); positive regulation of oligodendrocyte differentiation (ortholog); FOUND IN nucleoplasm (ortholog) 13 9740911 9750173 - 30032202 116914568 MODEL JAAIVD010000008;XM_032918924 XP_032774815 protein-coding 625895826 LOC116895034 small nucleolar RNA SNORA17 2 19326384 19326518 + 116895034 MODEL JAAIVD010000001;XR_004387220 snorna 625895829 Mmp11 matrix metallopeptidase 11 ENCODES a protein that exhibits metallopeptidase activity (ortholog); INVOLVED IN basement membrane organization (ortholog); collagen catabolic process (ortholog); collagen fibril organization (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); lung non-small cell carcinoma (ortholog); Spontaneous Abortions (ortholog); FOUND IN extracellular matrix (ortholog) 18 11515084 11524020 + 22301074;30032202 116886819 MODEL JAAIVD010000013;XM_032888247 XP_032744138 stromelysin-3 protein-coding 625895841 Hpd 4-hydroxyphenylpyruvate dioxygenase ENCODES a protein that exhibits 4-hydroxyphenylpyruvate dioxygenase activity (ortholog); iron ion binding (ortholog); mRNA m(6)A methyltransferase activity (ortholog); INVOLVED IN L-tyrosine catabolic process (ortholog); PARTICIPATES IN alkaptonuria pathway; disulfiram pharmacodynamics pathway; dopamine beta-hydroxylase deficiency pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 16 30640405 30651138 + 22301074;30032202 116885374 MODEL JAAIVD010000004;XM_032886649 XP_032742540 protein-coding 625895856 LOC116888080 egl nine homolog 1-like X 90561801 90563498 - 116888080 MODEL JAAIVD010000014;XR_004386290 pseudo 625895859 LOC116884382 60S ribosomal protein L30-like 15 54082154 54088497 + 116884382 MODEL JAAIVD010000010 pseudo 625895860 LOC116893433 vomeronasal type-1 receptor 4-like 2 175838420 175841087 - 22301074;30032202 116893433 MODEL JAAIVD010000001;XM_032895205 XP_032751096 protein-coding 625895866 LOC116894402 keratin-associated protein 6-2 2 157332656 157333027 - 30032202 116894402 MODEL JAAIVD010000001;XM_032896109 XP_032752000 protein-coding 625895869 LOC116888791 uncharacterized LOC116888791 X 103431292 103438008 - 22301074 116888791 MODEL JAAIVD010000014;XM_032890071 XP_032745962 uncharacterized protein LOC116888791 protein-coding 625895879 LOC116913982 olfactory receptor 4N4 12 72950633 72951559 + 22301074 116913982 MODEL JAAIVD010000007;XM_032918260 XP_032774151 protein-coding 625895882 Klk15 kallikrein related peptidase 15 2 155310636 155317580 - 22301074 116894352 MODEL JAAIVD010000001;XM_032896051 XP_032751942 kallikrein-15 protein-coding 625895889 Chodl chondrolectin ENCODES a protein that exhibits hyaluronic acid binding (ortholog); INVOLVED IN regulation of neuron projection development (ortholog); FOUND IN cytoplasm (ortholog); perinuclear region of cytoplasm (ortholog) 4 62971099 62992935 - 30032202 116898003 MODEL JAAIVD010000003;XM_032899399 XP_032755290 protein-coding 625895899 Nipsnap1 nipsnap homolog 1 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN mitophagy (ortholog); sensory perception of pain (ortholog); FOUND IN membrane (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 11 73848626 73871618 + 30032202 116912355 MODEL JAAIVD010000006;XM_032916411 XP_032772302 protein NipSnap homolog 1 protein-coding 625895913 Trmu tRNA mitochondrial 2-thiouridylase ENCODES a protein that exhibits tRNA-5-taurinomethyluridine 2-sulfurtransferase activity (ortholog); ASSOCIATED WITH aminoglycoside-induced deafness (ortholog); genetic disease (ortholog); infantile liver failure syndrome (ortholog); FOUND IN mitochondrion (ortholog) 1 255226650 255243151 + 22301074;30032202 116914727 MODEL JAAIVD010000025;XM_032919161;XM_032919173;XM_032919179;XM_032919189;XR_004389765 XP_032775052;XP_032775064;XP_032775070;XP_032775080 mitochondrial tRNA-specific 2-thiouridylase 1;tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding 625895940 LOC116894045 olfactory receptor 52K1 2 102557836 102558780 + 22301074 116894045 MODEL JAAIVD010000001;XM_032895765 XP_032751656 protein-coding 625895943 LOC116887757 U6 spliceosomal RNA 18 33098445 33098549 + 116887757 MODEL JAAIVD010000013;XR_004386257 snrna 625895946 Foxi2 forkhead box I2 2 66507144 66508789 - 30032202 116893874 MODEL JAAIVD010000001;XM_032895597 XP_032751488 forkhead box protein I2 protein-coding 625895950 LOC116912010 H/ACA ribonucleoprotein complex subunit DKC1-like 11 57315286 57340713 - 116912010 MODEL JAAIVD010000006 pseudo 625895951 LOC116899773 U6 spliceosomal RNA 4 39876336 39876438 - 116899773 MODEL JAAIVD010000003;XR_004387786 snrna 625895954 Znf475 zinc finger protein 475 15 79073640 79107569 - 116884627 MODEL JAAIVD010000010;XM_032885766;XM_032885768 XP_032741657;XP_032741659 zinc finger protein 474 protein-coding 625895966 LOC116911995 PRAME family member 20-like 11 48634593 48638162 + 30032202 116911995 MODEL JAAIVD010000006;XM_032915901 XP_032771792 protein-coding 625895971 LOC116892761 formyl peptide receptor-related sequence 3-like 2 182428278 182429248 - 30032202 116892761 MODEL JAAIVD010000001;XM_032894639 XP_032750530 protein-coding 625895974 LOC116888325 60S ribosomal protein L13-like 1 85918323 85918995 + 116888325 MODEL JAAIVD010000025 pseudo 625895975 Fam170b family with sequence similarity 170 member B INVOLVED IN positive regulation of acrosome reaction (ortholog); regulation of fertilization (ortholog); FOUND IN acrosomal vesicle (ortholog); outer acrosomal membrane (ortholog) 13 8556478 8559236 + 30032202 116915075 MODEL JAAIVD010000008;XM_032919493;XM_032919494 XP_032775384;XP_032775385 protein FAM170B protein-coding 625895984 B4galt5 beta-1,4-galactosyltransferase 5 ENCODES a protein that exhibits N-acetyllactosamine synthase activity (ortholog); UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity (ortholog); INVOLVED IN central nervous system myelination (ortholog); central nervous system neuron axonogenesis (ortholog); ganglioside biosynthetic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); multiple sclerosis (ortholog); FOUND IN Golgi apparatus (ortholog); trans-Golgi network (ortholog) 5 150638320 150688999 + 22301074;30032202 116902313 MODEL JAAIVD010000023;XM_032904759 XP_032760650 protein-coding 625895997 LOC116906173 7SK snRNA methylphosphate capping enzyme-like 7 105546187 105553669 + 116906173 MODEL JAAIVD010000026 pseudo 625895998 LOC116895612 aspartate aminotransferase, mitochondrial-like 3 169337840 169339114 + 22301074;30032202 116895612 MODEL JAAIVD010000012;XM_032896824 XP_032752715 protein-coding 625896001 Ttc27 tetratricopeptide repeat domain 27 ASSOCIATED WITH neuromuscular disease (ortholog) 7 18383333 18527675 - 22301074 116905927 MODEL JAAIVD010000026;XM_032908915 XP_032764806 tetratricopeptide repeat protein 27 protein-coding 625896025 LOC116889283 heterogeneous nuclear ribonucleoprotein A3-like X 101047448 101048514 + 116889283 MODEL JAAIVD010000014 pseudo 625896026 Mpl MPL proto-oncogene, thrombopoietin receptor ENCODES a protein that exhibits thrombopoietin receptor activity (ortholog); INVOLVED IN basophil homeostasis (ortholog); cellular response to hypoxia (ortholog); definitive hemopoiesis (ortholog); ASSOCIATED WITH Chronic Hepatitis B (ortholog); congenital amegakaryocytic thrombocytopenia (ortholog); congenital amegakaryocytic thrombocytopenia 1 (ortholog); FOUND IN cell surface (ortholog); Golgi apparatus (ortholog); neuronal cell body (ortholog) 1 38574436 38586475 + 22301074;30032202 116887313 MODEL JAAIVD010000025;XM_032888901;XM_032888910 XP_032744792;XP_032744801 thrombopoietin receptor protein-coding 625896042 Ddx23 DEAD-box helicase 23 ENCODES a protein that exhibits helicase activity (ortholog); INVOLVED IN R-loop processing (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH complex cortical dysplasia with other brain malformations 14B (ortholog); Failure to Thrive (ortholog); Fetal Growth Retardation (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); chromatin (ortholog); nucleolus (ortholog) 1 271471717 271488946 - 22301074;30032202 116884772 MODEL JAAIVD010000025;XM_032886001;XM_032886008 XP_032741892;XP_032741899 probable ATP-dependent RNA helicase DDX23 protein-coding 625896068 H6pd hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase ENCODES a protein that exhibits 6-phosphogluconolactonase activity (ortholog); carbohydrate binding (ortholog); glucose-6-phosphate dehydrogenase activity (ortholog); INVOLVED IN NADP+ metabolic process (ortholog); pentose-phosphate shunt (ortholog); pentose-phosphate shunt, oxidative branch (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); cortisone reductase deficiency (ortholog); cortisone reductase deficiency 1 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog); sarcoplasmic reticulum (ortholog) 1 10762497 10780403 + 22301074;30032202 116892529 MODEL JAAIVD010000025;XM_032894291 XP_032750182 GDH/6PGL endoplasmic bifunctional protein protein-coding 625896076 Firrm FIGNL1 interacting regulator of recombination and mitosis ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN chromosome segregation (ortholog); interstrand cross-link repair (ortholog); mitotic cell cycle (ortholog); FOUND IN chromosome, centromeric region (ortholog); kinetochore (ortholog); midbody (ortholog) 10 43171693 43221780 - 116910983 MODEL JAAIVD010000005;XM_032914696 XP_032770587 C10H1orf112 chromosome 10 C1orf112 homolog;uncharacterized protein C1orf112 homolog protein-coding 625896104 LOC116897967 histidine-rich protein PFHRP-II-like 4 21454806 21460697 + 116897967 MODEL JAAIVD010000003;XM_032899367 XP_032755258 protein-coding 625896109 LOC116898970 uncharacterized LOC116898970 4 50531072 50536038 + 116898970 MODEL JAAIVD010000003;XR_004387677 ncrna 625896113 LOC116913281 egl nine homolog 1-like 12 87519540 87534810 + 116913281 MODEL JAAIVD010000007 pseudo 625896114 LOC116906223 Ig heavy chain V region 441-like 7 121657595 121665042 - 116906223 MODEL JAAIVD010000026 pseudo 625896115 LOC116895514 60S ribosomal protein L26-like 3 116142957 116151281 - 116895514 MODEL JAAIVD010000012 pseudo 625896116 LOC116905810 disintegrin and metalloproteinase domain-containing protein 21 7 95748583 95751102 - 22301074;30032202 116905810 MODEL JAAIVD010000026;XM_032908778 XP_032764669 protein-coding 625896121 Trnae-cuc transfer RNA glutamic acid (anticodon CUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 1 32314657 32314728 + 116890651 MODEL JAAIVD010000025 trna 625896122 Mgat4a alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity (ortholog); glycosyltransferase activity (ortholog); INVOLVED IN glycoprotein biosynthetic process (ortholog); N-glycan processing (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); pancreatic cancer (ortholog) 4 113641554 113730812 - 30032202 116899298 MODEL JAAIVD010000003;XM_032900948;XM_032900949;XM_032900950;XM_032900951 XP_032756839;XP_032756840;XP_032756841;XP_032756842 protein-coding 625896149 LOC116913158 glutamine synthetase-like 12 45025235 45030706 + 116913158 MODEL JAAIVD010000007 pseudo 625896150 LOC116888556 uncharacterized LOC116888556 X 67115756 67117382 - 116888556 MODEL JAAIVD010000014;XR_004386321 ncrna 625896154 Anapc7 anaphase promoting complex subunit 7 ENCODES a protein that exhibits enzyme-substrate adaptor activity (ortholog); protein phosphatase binding (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); brain development (ortholog); protein branched polyubiquitination (ortholog); ASSOCIATED WITH FERGUSON-BONNI NEURODEVELOPMENTAL SYNDROME (ortholog); syndromic intellectual disability (ortholog); FOUND IN anaphase-promoting complex (ortholog); heterochromatin (ortholog); intercellular bridge (ortholog) 16 31408561 31436085 - 22301074;30032202 116885364 MODEL JAAIVD010000004;XM_032886637 XP_032742528 anaphase-promoting complex subunit 7 protein-coding 625896169 LOC116893449 nucleosome assembly protein 1-like 1 2 177748002 177762353 + 116893449 MODEL JAAIVD010000001 pseudo 625896170 LOC116907335 polyadenylate-binding protein 1-like 1 162758351 162760468 - 30032202 116907335 MODEL JAAIVD010000025;XM_032910277 XP_032766168 protein-coding 625896174 LOC116907555 olfactory receptor 149 8 82514791 82515726 - 22301074 116907555 MODEL JAAIVD010000027;XM_032910578 XP_032766469 protein-coding 625896177 Slc17a2 solute carrier family 17 member 2 ENCODES a protein that exhibits urate transmembrane transporter activity (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); liver cirrhosis (ortholog); FOUND IN apical plasma membrane (ortholog) 14 42791889 42803363 + 22301074;30032202 116883595 MODEL JAAIVD010000009;XM_032884774;XM_032884775 XP_032740665;XP_032740666 sodium-dependent phosphate transport protein 3 protein-coding 625896194 Slitrk3 SLIT and NTRK like family member 3 INVOLVED IN axonogenesis (ortholog); gephyrin clustering involved in postsynaptic density assembly (ortholog); neurotransmitter-gated ion channel clustering (ortholog); ASSOCIATED WITH intellectual disability (ortholog); FOUND IN cell surface (ortholog); GABA-ergic synapse (ortholog); postsynaptic density membrane (ortholog) 3 83134328 83146789 + 22301074;30032202 116896785 MODEL JAAIVD010000012;XM_032898249;XM_032898250;XM_032898251 XP_032754140;XP_032754141;XP_032754142 SLIT and NTRK-like protein 3 protein-coding 625896206 Pip4p2 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 ENCODES a protein that exhibits phosphatidylinositol-4,5-bisphosphate 4-phosphatase activity (ortholog); INVOLVED IN negative regulation of phagocytosis (ortholog); phosphatidylinositol dephosphorylation (ortholog); FOUND IN late endosome membrane (ortholog); lysosomal membrane (ortholog); phagocytic vesicle membrane (ortholog) 1 128875142 128923017 - 22301074;30032202 116903217 MODEL JAAIVD010000025;XM_032905596 XP_032761487 type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase protein-coding 625896217 Prss53 serine protease 53 2 74013949 74020178 + 22301074;30032202 116891454 MODEL JAAIVD010000001;XM_032892526;XR_004386836 XP_032748417 protein-coding 625896236 Poglut2 protein O-glucosyltransferase 2 ENCODES a protein that exhibits UDP-glucosyltransferase activity (ortholog); UDP-xylosyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation via glucose (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog); nucleoplasm (ortholog) 4 120166162 120178446 - 22301074;30032202 116899348 MODEL JAAIVD010000003;XM_032901043 XP_032756934 protein-coding 625896250 Pon3 paraoxonase 3 ENCODES a protein that exhibits acyl-L-homoserine-lactone lactonohydrolase activity (ortholog); arylesterase activity (ortholog); dihydrocoumarin hydrolase activity (ortholog); INVOLVED IN carboxylic acid catabolic process (ortholog); coumarin catabolic process (ortholog); lactone catabolic process (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); atherosclerosis (ortholog); FOUND IN extracellular region (ortholog) 6 133336590 133363374 + 22301074;30032202 116904099 MODEL JAAIVD010000024;XM_032906968 XP_032762859 serum paraoxonase/lactonase 3 protein-coding 625896263 LOC116905889 ribosome production factor 2 homolog 7 121571378 121572296 + 116905889 MODEL JAAIVD010000026 pseudo 625896264 LOC116915149 U6atac minor spliceosomal RNA 13 30585000 30585120 + 116915149 MODEL JAAIVD010000008;XR_004389818 snrna 625896267 LOC116896377 glutathione S-transferase Mu 6 3 50316105 50320078 + 22301074;30032202 116896377 MODEL JAAIVD010000012;XM_032897500 XP_032753391 protein-coding 625896277 Hspa13 heat shock protein family A (Hsp70) member 13 4 66217686 66231842 + 22301074;30032202 116899051 MODEL JAAIVD010000003;XM_032900523 XP_032756414 heat shock 70 kDa protein 13 protein-coding 625896286 LOC116902958 LYR motif-containing protein 4-like 6 124527756 124528982 - 116902958 MODEL JAAIVD010000024 pseudo 625896287 LOC116886339 guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1-like 17 1649126 1650116 + 116886339 MODEL JAAIVD010000011 pseudo 625896288 Tob1 transducer of ERBB2, 1 ENCODES a protein that exhibits receptor tyrosine kinase binding (ortholog); SMAD binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN negative regulation of BMP signaling pathway (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of nuclear-transcribed mRNA poly(A) tail shortening (ortholog); ASSOCIATED WITH Chloracne (ortholog); endometriosis (ortholog); Experimental Neoplasms (ortholog); FOUND IN CCR4-NOT complex (ortholog); cytoplasm (ortholog) 9 51321679 51325486 - 30032202 116909214 MODEL JAAIVD010000002;XM_032912716 XP_032768607 protein Tob1 protein-coding 625896294 LOC116893908 uncharacterized LOC116893908 2 76572108 76574495 - 116893908 MODEL JAAIVD010000001;XM_032895634 XP_032751525 uncharacterized protein LOC116893908 protein-coding 625896299 LOC116885973 U1 spliceosomal RNA 16 18854939 18855096 + 116885973 MODEL JAAIVD010000004;XR_004386054 snrna 625896302 LOC116902703 ras GTPase-activating protein-binding protein 1-like 6 42992954 42994461 + 116902703 MODEL JAAIVD010000024 pseudo 625896303 LOC116885583 uncharacterized LOC116885583 16 9408982 9410766 + 116885583 MODEL JAAIVD010000004;XR_004386025 ncrna 625896307 LOC116908433 U1 spliceosomal RNA 8 78738446 78738613 + 116908433 MODEL JAAIVD010000027;XR_004388963 snrna 625896310 LOC116904569 early activation antigen CD69-like 6 18307258 18315231 + 30032202 116904569 MODEL JAAIVD010000024;XM_032907368 XP_032763259 protein-coding 625896319 Kcnk18 potassium two pore domain channel subfamily K member 18 ENCODES a protein that exhibits calcium-activated potassium channel activity (ortholog); outward rectifier potassium channel activity (ortholog); INVOLVED IN cellular response to pH (ortholog); potassium ion export across plasma membrane (ortholog); potassium ion transport (ortholog); ASSOCIATED WITH migraine (ortholog); FOUND IN plasma membrane (ortholog) 2 56878688 56892684 - 22301074;30032202 116893833 MODEL JAAIVD010000001;XM_032895549;XM_032895550 XP_032751440;XP_032751441 potassium channel subfamily K member 18 protein-coding 625896330 Ptbp2 polypyrimidine tract binding protein 2 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN cerebellum development (ortholog); mRNA splice site recognition (ortholog); negative regulation of RNA splicing (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN growth cone (ortholog); neuronal cell body (ortholog); spliceosomal complex (ortholog) 3 39994896 40056682 + 22301074;30032202 116896317 MODEL AJ010585;JAAIVD010000012;XM_032897409;XM_032897410;XM_032897411;XM_032897413 CAB54073;XP_032753300;XP_032753301;XP_032753302;XP_032753304 ptblp PTB-like protein;polypyrimidine tract-binding protein 2 protein-coding 625896355 Cnih3 cornichon family AMPA receptor auxiliary protein 3 ENCODES a protein that exhibits channel regulator activity (ortholog); INVOLVED IN neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); regulation of AMPA receptor activity (ortholog); regulation of membrane potential (ortholog); ASSOCIATED WITH endometriosis (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); dendritic shaft (ortholog); glutamatergic synapse (ortholog) 10 59702664 59809983 + 22301074;30032202 116911346 MODEL JAAIVD010000005;XM_032915262;XM_032915263 XP_032771153;XP_032771154 protein cornichon homolog 3 protein-coding 625896369 Tle2 TLE family member 2, transcriptional corepressor ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH lymphopenia (ortholog); neutropenia (ortholog); FOUND IN nuclear body (ortholog) 1 153300689 153316256 - 22301074;30032202 116904197 MODEL JAAIVD010000025;XM_032907113 XP_032763004 transducin-like enhancer protein 2 protein-coding 625896394 Tmem63a transmembrane protein 63A ENCODES a protein that exhibits mechanosensitive monoatomic ion channel activity (ortholog); osmolarity-sensing monoatomic cation channel activity (ortholog); phospholipid scramblase activity (ortholog); INVOLVED IN lysosome organization (ortholog); surfactant secretion (ortholog); ASSOCIATED WITH Disease Progression (ortholog); genetic disease (ortholog); hypomyelinating leukodystrophy 19 (ortholog); FOUND IN centriolar satellite (ortholog); early endosome membrane (ortholog); lysosomal membrane (ortholog) 10 59259920 59293765 + 22301074;30032202 116911311 MODEL JAAIVD010000005;XM_032915227 XP_032771118 CSC1-like protein 1 protein-coding 625896421 Desi2 desumoylating isopeptidase 2 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); K48-linked deubiquitinase activity (ortholog); K63-linked deubiquitinase activity (ortholog); ASSOCIATED WITH Ovarian Neoplasms (ortholog); FOUND IN cytoplasm (ortholog) 10 56546922 56591376 + 30032202 116910995 MODEL JAAIVD010000005;XM_032914710;XR_004389291 XP_032770601 deubiquitinase DESI2 protein-coding 625896432 LOC116902544 small nucleolar RNA SNORA18 5 134862769 134862899 - 116902544 MODEL JAAIVD010000023;XR_004388145 snorna 625896435 Mcoln1 mucolipin TRP cation channel 1 ENCODES a protein that exhibits calcium channel activity (ortholog); identical protein binding (ortholog); intracellularly phosphatidylinositol-3,5-bisphosphate-gated monatomic cation channel activity (ortholog); INVOLVED IN autophagosome maturation (ortholog); calcium ion export (ortholog); calcium ion transmembrane transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Corneal Opacity (ortholog); fundus dystrophy (ortholog); FOUND IN intracellular vesicle (ortholog); late endosome (ortholog); lysosomal membrane (ortholog) 16 1430296 1444562 + 30032202 116885148 MODEL JAAIVD010000004;XM_032886352;XM_032886353;XM_032886354 XP_032742243;XP_032742244;XP_032742245 mucolipin 1;mucolipin-1 protein-coding 625896461 Gabrr1 gamma-aminobutyric acid type A receptor subunit rho1 ENCODES a protein that exhibits GABA receptor activity (ortholog); GABA-A receptor activity (ortholog); GABA-gated chloride ion channel activity (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); intracellular vesicle (ortholog) 1 109874820 109912314 - 22301074;30032202 116888921 MODEL JAAIVD010000025;XM_032890169;XM_032890173;XM_032890175 XP_032746060;XP_032746064;XP_032746066 gamma-aminobutyric acid receptor subunit rho-1 protein-coding 625896480 LOC116914083 cytochrome c, somatic-like 12 21458355 21459194 - 116914083 MODEL JAAIVD010000007 pseudo 625896481 Hpgds hematopoietic prostaglandin D synthase ENCODES a protein that exhibits calcium ion binding (ortholog); magnesium ion binding (ortholog); prostaglandin-D synthase activity (ortholog); INVOLVED IN cyclooxygenase pathway (ortholog); negative regulation of male germ cell proliferation (ortholog); prostaglandin metabolic process (ortholog); PARTICIPATES IN prostaglandin biosynthetic pathway; prostanoid metabolic pathway; ASSOCIATED WITH allergic asthma (ortholog); asthma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog) 6 77693242 77716770 - 30032202 116903716 MODEL JAAIVD010000024;XM_032906392 XP_032762283 protein-coding 625896491 Chac2 ChaC glutathione specific gamma-glutamylcyclotransferase 2 ENCODES a protein that exhibits glutathione specific gamma-glutamylcyclotransferase activity (ortholog) 11 98481449 98488964 - 22301074;30032202 116912510 MODEL JAAIVD010000006;XM_032916596;XM_032916597 XP_032772487;XP_032772488 glutathione-specific gamma-glutamylcyclotransferase 2 protein-coding 625896501 LOC116891164 GSK-3-binding protein FRAT2-like 2 40953733 40954855 - 30032202 116891164 MODEL JAAIVD010000001;XM_032891966 XP_032747857 protein-coding 625896506 LOC116906669 40S ribosomal protein S16-like 8 24731559 24732072 - 116906669 MODEL JAAIVD010000027 pseudo 625896507 Dnajc2 DnaJ heat shock protein family (Hsp40) member C2 ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); Hsp70 protein binding (ortholog); INVOLVED IN DNA replication (ortholog); negative regulation of cell growth (ortholog); negative regulation of DNA biosynthetic process (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) 6 151061973 151088111 - 30032202 116904180 MODEL JAAIVD010000024;XM_032907089 XP_032762980 dnaJ homolog subfamily C member 2 protein-coding 625896528 Nup160 nucleoporin 160 ENCODES a protein that exhibits structural constituent of nuclear pore (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); nephron development (ortholog); PARTICIPATES IN mRNA nuclear export pathway; ASSOCIATED WITH nephrotic syndrome type 19 (ortholog); osteopetrosis (ortholog); FOUND IN kinetochore (ortholog); nuclear envelope (ortholog); nuclear pore (ortholog) 5 64861157 64915932 + 30032202 116901596 MODEL JAAIVD010000023;XM_032903621 XP_032759512 nuclear pore complex protein Nup160 protein-coding 625896568 LOC116884115 U6 spliceosomal RNA 14 64017179 64017284 + 116884115 MODEL JAAIVD010000009;XR_004385846 snrna 625896571 LOC116899806 small nucleolar RNA SNORA63 4 7900752 7900876 + 116899806 MODEL JAAIVD010000003;XR_004387808 snorna 625896574 LOC116904257 MICOS complex subunit Mic26-like 6 33092702 33096108 + 116904257 MODEL JAAIVD010000024 pseudo 625896575 LOC116910923 RNA-binding motif protein, Y chromosome, family 1 member A1-like 10 54693742 54699969 - 116910923 MODEL JAAIVD010000005 pseudo 625896576 LOC116883669 cathepsin L1-like 14 77368086 77371089 + 30032202 116883669 MODEL JAAIVD010000009;XM_032884866 XP_032740757 protein-coding 625896585 Pcdh8 protocadherin 8 INVOLVED IN chemical synaptic transmission (ortholog); modulation of chemical synaptic transmission (ortholog); morphogenesis of embryonic epithelium (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic membrane (ortholog); Schaffer collateral - CA1 synapse (ortholog) 12 44560856 44565389 + 22301074 116913642 MODEL JAAIVD010000007;XM_032917910;XM_032917911 XP_032773801;XP_032773802 protocadherin-8 protein-coding 625896594 Rgp1 RGP1 partner of RAB6A GEF complex ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN negative regulation of protein catabolic process (ortholog); positive regulation of GTPase activity (ortholog); retrograde transport, endosome to Golgi (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); protein-containing complex (ortholog) 1 2914190 2918487 - 30032202 116890993 MODEL JAAIVD010000025;XM_032891672 XP_032747563 RAB6A-GEF complex partner protein 2;RGP1 homolog, RAB6A GEF complex partner 1 protein-coding 625896607 LOC116895718 60S ribosomal protein L23a-like 3 221153724 221154477 + 116895718 MODEL JAAIVD010000012 pseudo 625896608 LOC116893607 40S ribosomal protein S10-like 2 4811150 4811644 + 30032202 116893607 MODEL JAAIVD010000001;XM_032895315 XP_032751206 protein-coding 625896611 LOC116894135 olfactory receptor 52E5 2 103989565 103990461 + 22301074 116894135 MODEL JAAIVD010000001;XM_032895853 XP_032751744 protein-coding 625896614 Fam228a family with sequence similarity 228 member A 7 25372336 25387645 - 116906284 MODEL JAAIVD010000026;XM_032909172 XP_032765063 protein FAM228A protein-coding 625896627 Fam98c family with sequence similarity 98 member C ASSOCIATED WITH asphyxiating thoracic dystrophy 3 (ortholog); autism spectrum disorder (ortholog) 2 166838318 166841883 + 30032202 116892363 MODEL JAAIVD010000001;XM_032894021;XR_004386946;XR_004386947 XP_032749912 protein FAM98C protein-coding 625896644 LOC116889276 39S ribosomal protein L30, mitochondrial-like 1 127838978 127839409 - 116889276 MODEL JAAIVD010000025 pseudo 625896645 Trappc6b trafficking protein particle complex subunit 6B ASSOCIATED WITH genetic disease (ortholog); neurodevelopmental disorder with microcephaly, epilepsy, and brain atrophy (ortholog) 7 72339555 72350829 - 22301074;30032202 116905082 MODEL JAAIVD010000026;XM_032907789 XP_032763680 trafficking protein particle complex 6B protein-coding 625896655 LOC116899930 U1 spliceosomal RNA 4 3619701 3619856 + 116899930 MODEL JAAIVD010000003;XR_004387898 snrna 625896658 LOC116890154 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial-like 1 251721099 251721891 + 116890154 MODEL JAAIVD010000025;XM_032890887 XP_032746778 protein-coding 625896662 Clmp CXADR like cell adhesion molecule INVOLVED IN actin filament polymerization (ortholog); adherens junction assembly (ortholog); adipose tissue development (ortholog); ASSOCIATED WITH genetic disease (ortholog); intestinal pseudo-obstruction (ortholog); short bowel syndrome (ortholog); FOUND IN bicellular tight junction (ortholog); cytoplasmic microtubule (ortholog); postsynaptic membrane (ortholog) 8 35282653 35385050 + 30032202 116908153 MODEL JAAIVD010000027;XM_032911456 XP_032767347 CXADR like membrane protein;CXADR-like membrane protein protein-coding 625896674 LOC116897254 histone deacetylase 1-like 3 197862755 197864698 + 116897254 MODEL JAAIVD010000012 pseudo 625896675 Anapc1 anaphase promoting complex subunit 1 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); ASSOCIATED WITH High Myopia (ortholog); Rothmund-Thomson Syndrome Type 1 (ortholog); FOUND IN anaphase-promoting complex (ortholog); nucleus (ortholog) 5 107404352 107478545 - 30032202 116901949 MODEL JAAIVD010000023;XM_032904183 XP_032760074 anaphase-promoting complex subunit 1 protein-coding 625896727 LOC116908391 small nucleolar RNA SNORA17 8 88848825 88848953 - 116908391 MODEL JAAIVD010000027;XR_004388936 snorna 625896730 LOC116896084 adhesion G-protein coupled receptor V1-like 3 214972919 214987469 + 30032202 116896084 MODEL JAAIVD010000012;XM_032897062 XP_032752953 protein-coding 625896738 LOC116885347 uncharacterized LOC116885347 16 9743009 9744424 + 116885347 MODEL JAAIVD010000004;XR_004386005 ncrna 625896742 LOC116905139 uncharacterized LOC116905139 7 84659507 84671054 - 116905139 MODEL JAAIVD010000026;XR_004388489;XR_004388490;XR_004388491 ncrna 625896753 Snx27 sorting nexin 27 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); ionotropic glutamate receptor binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); endocytic recycling (ortholog); endosomal transport (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH Disease Progression (ortholog); Dravet syndrome (ortholog); early myoclonic encephalopathy (ortholog); FOUND IN early endosome (ortholog); endosome (ortholog); glutamatergic synapse (ortholog) 3 62598174 62677132 + 22301074;30032202 116896583 MODEL JAAIVD010000012;XM_032897810;XM_032897811 XP_032753701;XP_032753702 sorting nexin-27 protein-coding 625896772 LOC116906484 small nucleolar RNA SNORA76 7 91312463 91312579 - 116906484 MODEL JAAIVD010000026;XR_004388727 snorna 625896775 Ccl20 C-C motif chemokine ligand 20 ENCODES a protein that exhibits CCR6 chemokine receptor binding (ortholog); chemokine activity (ortholog); cytokine activity (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); calcium-mediated signaling (ortholog); cell chemotaxis (ortholog); ASSOCIATED WITH acrodermatitis (ortholog); Acute Liver Failure (ortholog); Acute-On-Chronic Liver Failure (ortholog); FOUND IN extracellular region (ortholog) 4 155953398 155955460 + 22301074;30032202 116898244 MODEL JAAIVD010000003;XM_032899593;XM_032899594 XP_032755484;XP_032755485 C-C motif chemokine 20 protein-coding 625896786 C1H1orf185 chromosome 1 C1orf185 homolog ASSOCIATED WITH atrial fibrillation (ortholog) 1 45299410 45339235 + 116890543 MODEL JAAIVD010000025;XM_032891013 XP_032746904 uncharacterized protein C1orf185 homolog protein-coding 625896795 LOC116904381 centrosomal protein of 170 kDa protein B-like 6 92034140 92037334 - 22301074 116904381 MODEL JAAIVD010000024;XM_032907251 XP_032763142 protein-coding 625896799 LOC116907134 60S ribosomal protein L34-like 8 39283647 39284947 + 116907134 MODEL JAAIVD010000027 pseudo 625896800 LOC116890584 small nucleolar RNA SNORA17 1 118331651 118331778 - 116890584 MODEL JAAIVD010000025;XR_004386746 snorna 625896803 Spry1 sprouty RTK signaling antagonist 1 INVOLVED IN bud elongation involved in lung branching (ortholog); endothelial tube formation (ortholog); epithelial to mesenchymal transition involved in cardiac fibroblast development (ortholog); ASSOCIATED WITH genetic disease (ortholog); Peritoneal Fibrosis (ortholog); FOUND IN cytosol (ortholog) 3 116346782 116351513 - 22301074;30032202 116896915 MODEL JAAIVD010000012;XM_032898477;XM_032898478;XM_032898479 XP_032754368;XP_032754369;XP_032754370 protein sprouty homolog 1 protein-coding 625896815 Phax phosphorylated adaptor for RNA export ENCODES a protein that exhibits mRNA cap binding complex binding (ortholog); toxic substance binding (ortholog); INVOLVED IN RNA stabilization (ortholog); snRNA export from nucleus (ortholog); ASSOCIATED WITH Hirschsprung's disease (ortholog); FOUND IN cytoplasm (ortholog); neuronal cell body (ortholog); nucleoplasm (ortholog) 15 75236515 75254074 - 30032202 116884602 MODEL JAAIVD010000010;XM_032885742 XP_032741633 phosphorylated adapter RNA export protein protein-coding 625896824 LOC116897559 small nucleolar RNA SNORA17 3 144961969 144962100 - 116897559 MODEL JAAIVD010000012;XR_004387572 snorna 625896827 Triqk triple QxxK/R motif containing 1 130637328 130663580 - 22301074 116903279 MODEL JAAIVD010000025;XM_032905703 XP_032761594 triple QxxK/R motif-containing protein protein-coding 625896834 LOC116897547 small nucleolar RNA SNORA17 3 90813654 90813784 + 116897547 MODEL JAAIVD010000012;XR_004387561 snorna 625896837 Hcn2 hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2 ENCODES a protein that exhibits identical protein binding (ortholog); intracellularly cAMP-activated cation channel activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN ammonium transmembrane transport (ortholog); cellular response to aldosterone (ortholog); cellular response to cAMP (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); Chronic Cerebral Hypoperfusion (ortholog); Dental Pulp Exposure (ortholog); FOUND IN axon (ortholog); dendrite membrane (ortholog); dendritic shaft (ortholog) 1 155138074 155156965 - 22301074 116905669 MODEL JAAIVD010000025;XM_032908655 XP_032764546 potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2 protein-coding 625896847 Zp4 zona pellucida glycoprotein 4 ENCODES a protein that exhibits acrosin binding (ortholog); identical protein binding (ortholog); INVOLVED IN acrosomal vesicle exocytosis (ortholog); negative regulation of binding of sperm to zona pellucida (ortholog); positive regulation of acrosome reaction (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN egg coat (ortholog) 14 24925622 24932128 + 30032202 116884004 MODEL JAAIVD010000009;XM_032885241 XP_032741132 zona pellucida sperm-binding protein 4 protein-coding 625896863 Vps13c vacuolar protein sorting 13 homolog C INVOLVED IN mitochondrion organization (ortholog); negative regulation of type 2 mitophagy (ortholog); response to insulin (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); early-onset Parkinson's disease (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); dense core granule membrane (ortholog); endoplasmic reticulum membrane (ortholog) 8 62210068 62362238 + 30032202 116907541 MODEL JAAIVD010000027;XM_032910561;XM_032910562 XP_032766452;XP_032766453 vacuolar protein sorting-associated protein 13C protein-coding 625896955 Elk3 ETS transcription factor ELK3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN angiogenesis (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Breast Neoplasms (ortholog); congenital chylothorax (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 1 172304634 172366516 - 22301074;30032202 116908195 MODEL JAAIVD010000025;XM_032911481;XM_032911485;XM_032911487;XM_032911491;XM_032911492 XP_032767372;XP_032767376;XP_032767378;XP_032767382;XP_032767383 ETS domain-containing protein Elk-3 protein-coding 625896977 LOC116893048 phytanoyl-CoA dioxygenase, peroxisomal-like 2 29036750 29037610 + 116893048 MODEL JAAIVD010000001 pseudo 625896978 Ooep oocyte expressed protein ENCODES a protein that exhibits RNA binding (ortholog); structural constituent of cytoplasmic lattice (ortholog); INVOLVED IN actin filament organization (ortholog); embryo implantation (ortholog); embryonic pattern specification (ortholog); FOUND IN apical part of cell (ortholog); cell cortex (ortholog); cytoplasm (ortholog) 8 72550358 72551324 - 22301074;30032202 116908212 MODEL JAAIVD010000027;XM_032911488 XP_032767379 oocyte-expressed protein homolog protein-coding 625896984 Jmy junction mediating and regulatory protein, p53 cofactor ENCODES a protein that exhibits microtubule binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN 'de novo' actin filament nucleation (ortholog); actin polymerization-dependent cell motility (ortholog); Arp2/3 complex-mediated actin nucleation (ortholog); FOUND IN autophagosome membrane (ortholog); cell leading edge (ortholog); cytoplasmic vesicle (ortholog) 3 202842088 202912011 + 22301074;30032202 116897290 MODEL JAAIVD010000012;XM_032899023 XP_032754914 junction-mediating and -regulatory protein protein-coding 625896999 LOC116889041 gamma-aminobutyric acid receptor subunit alpha-3-like X 20169269 20345417 + 22301074;30032202 116889041 MODEL JAAIVD010000014;XM_032890235 XP_032746126 protein-coding 625897005 Large1 LARGE xylosyl- and glucuronyltransferase 1 ENCODES a protein that exhibits glucuronosyltransferase activity (ortholog); glycosyltransferase activity (ortholog); hexosyltransferase activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); astrocyte differentiation (ortholog); basement membrane organization (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); congenital muscular dystrophy (ortholog); congenital muscular dystrophy-dystroglycanopathy type A1 (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); neuromuscular junction (ortholog) 17 111163 354500 + 30032202 116886450 MODEL JAAIVD010000011;XM_032887950 XP_032743841 protein-coding 625897022 Tmem63c transmembrane protein 63C ENCODES a protein that exhibits calcium-activated cation channel activity (ortholog); osmolarity-sensing monoatomic cation channel activity (ortholog); phospholipid scramblase activity (ortholog); INVOLVED IN glomerular filtration (ortholog); monoatomic cation transport (ortholog); ASSOCIATED WITH Albuminuria (ortholog); focal segmental glomerulosclerosis (ortholog); hereditary spastic paraplegia 87 (ortholog); FOUND IN lysosomal membrane (ortholog); plasma membrane (ortholog) 7 101122729 101193183 + 30032202 116905315 MODEL JAAIVD010000026;XM_032908204 XP_032764095 calcium permeable stress-gated cation channel 1 protein-coding 625897050 LOC116909596 zinc finger protein 431-like 9 62115708 62130276 - 30032202 116909596 MODEL JAAIVD010000002;XM_032913218;XM_032913219 XP_032769109;XP_032769110 protein-coding 625897063 LOC116885297 inactive 2'-5'-oligoadenylate synthase 1B 16 32975743 32986327 + 30032202 116885297 MODEL JAAIVD010000004;XM_032886546 XP_032742437 protein-coding 625897073 LOC116914180 U6 spliceosomal RNA 12 75783600 75783705 + 116914180 MODEL JAAIVD010000007;XR_004389723 snrna 625897076 LOC116909355 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-like 1 195939974 195940438 + 116909355 MODEL JAAIVD010000025 pseudo 625897077 Orai3 ORAI calcium release-activated calcium modulator 3 ENCODES a protein that exhibits store-operated calcium channel activity (ortholog); INVOLVED IN store-operated calcium entry (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; FOUND IN membrane (ortholog); plasma membrane (ortholog) 2 74129740 74134956 - 30032202 116891462 MODEL JAAIVD010000001;XM_032892546 XP_032748437 protein orai-3 protein-coding 625897083 Tsc1 TSC complex subunit 1 ENCODES a protein that exhibits ATPase inhibitor activity (ortholog); Hsp70 protein binding (ortholog); Hsp90 protein binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); adaptive immune response (ortholog); adult locomotory behavior (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anterior segment dysgenesis (ortholog); autism spectrum disorder (ortholog); FOUND IN actin filament (ortholog); cell cortex (ortholog); cell projection (ortholog) 5 7987540 8033114 - 30032202 116901225 MODEL JAAIVD010000023;XM_032902953;XM_032902954;XM_032902955;XM_032902956;XM_032902957 XP_032758844;XP_032758845;XP_032758846;XP_032758847;XP_032758848 hamartin protein-coding 625897122 LOC116909450 uncharacterized LOC116909450 9 56043045 56048395 + 116909450 MODEL JAAIVD010000002;XR_004389072;XR_004389073 ncrna 625897128 Selenoi selenoprotein I ENCODES a protein that exhibits ethanolaminephosphotransferase activity (ortholog); INVOLVED IN ether lipid biosynthetic process (ortholog); myelination (ortholog); phosphatidylethanolamine biosynthetic process (ortholog); ASSOCIATED WITH hereditary spastic paraplegia 81 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 7 23765205 23807059 - 30032202 116906010 MODEL JAAIVD010000026;XM_032909049 XP_032764940 ethanolaminephosphotransferase 1 protein-coding 625897142 Relt RELT TNF receptor INVOLVED IN amelogenesis (ortholog); apoptotic process (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta type 3C (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog) 2 99152885 99159762 - 22301074;30032202 116891749 MODEL JAAIVD010000001;XM_032893062 XP_032748953 tumor necrosis factor receptor superfamily member 19L protein-coding 625897156 Mrpl9 mitochondrial ribosomal protein L9 ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 3 62725841 62730569 - 30032202 116896587 MODEL JAAIVD010000012;XM_032897827 XP_032753718 39S ribosomal protein L9, mitochondrial protein-coding 625897167 LOC116896468 palmitoyltransferase ZDHHC3-like 3 57396867 57398091 + 30032202 116896468 MODEL JAAIVD010000012;XM_032897629 XP_032753520 protein-coding 625897173 Pygl glycogen phosphorylase L ENCODES a protein that exhibits AMP binding (ortholog); ATP binding (ortholog); bile acid binding (ortholog); INVOLVED IN 5-phosphoribose 1-diphosphate biosynthetic process (ortholog); glucose homeostasis (ortholog); glycogen catabolic process (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; glycogen degradation pathway; glycogen metabolic pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); genetic disease (ortholog); glycogen storage disease (ortholog) 7 83870917 83907195 - 22301074;30032202 116905131 MODEL JAAIVD010000026;XM_032907882 XP_032763773 glycogen phosphorylase, liver form protein-coding 625897197 Rhag Rh associated glycoprotein ENCODES a protein that exhibits ammonium channel activity (ortholog); ankyrin binding (ortholog); carbon dioxide transmembrane transporter activity (ortholog); INVOLVED IN ammonium transmembrane transport (ortholog); carbon dioxide transmembrane transport (ortholog); carbon dioxide transport (ortholog); ASSOCIATED WITH hemolytic anemia (ortholog); overhydrated hereditary stomatocytosis (ortholog); Rh deficiency syndrome (ortholog); FOUND IN ankyrin-1 complex (ortholog); membrane (ortholog); plasma membrane (ortholog) 4 95043940 95069762 - 22301074;30032202 116898089 MODEL JAAIVD010000003;XM_032899475 XP_032755366 ammonium transporter Rh type A protein-coding 625897211 LOC116911614 uncharacterized LOC116911614 10 28353883 28441419 - 116911614 MODEL JAAIVD010000005 pseudo 625897212 Dnajc11 DnaJ heat shock protein family (Hsp40) member C11 INVOLVED IN cristae formation (ortholog); FOUND IN MIB complex (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 1 8758386 8804456 - 30032202 116892403 MODEL JAAIVD010000025;XM_032894085 XP_032749976 dnaJ homolog subfamily C member 11 protein-coding 625897232 LOC116887178 uncharacterized LOC116887178 18 16946193 16948538 + 116887178 MODEL JAAIVD010000013;XR_004386203 ncrna 625897236 Prr15 proline rich 15 6 86759149 86762353 - 116903775 MODEL JAAIVD010000024;XM_032906465 XP_032762356 proline-rich protein 15 protein-coding 625897242 Spsb3 splA/ryanodine receptor domain and SOCS box containing 3 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN negative regulation of cGAS/STING signaling pathway (ortholog); negative regulation of epithelial to mesenchymal transition (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); nucleus (ortholog) 9 2167157 2172687 + 22301074;30032202 116909340 MODEL JAAIVD010000002;XM_032912889 XP_032768780 SPRY domain-containing SOCS box protein 3 protein-coding 625897253 Itpa inosine triphosphatase ENCODES a protein that exhibits dITP diphosphatase activity (ortholog); identical protein binding (ortholog); nucleoside triphosphate diphosphatase activity (ortholog); INVOLVED IN chromosome organization (ortholog); ITP catabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH anemia (ortholog); anodontia (ortholog); Chemotherapy-Induced Febrile Neutropenia (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 5 110408955 110421083 + 22301074;30032202 116901975 MODEL JAAIVD010000023;XM_032904221 XP_032760112 inosine triphosphate pyrophosphatase protein-coding 625897265 Nab2 NGFI-A binding protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN endochondral ossification (ortholog); myelination (ortholog); negative regulation of transcription by RNA polymerase III (ortholog); ASSOCIATED WITH Solitary Fibrous Tumors (ortholog); FOUND IN nucleus (ortholog) 1 206108038 206113950 - 22301074;30032202 116910202 MODEL JAAIVD010000025;XM_032914069;XM_032914079 XP_032769960;XP_032769970 NGFI-A-binding protein 2 protein-coding 625897279 LOC116905741 60S ribosomal protein L10a-like 7 82613264 82613968 - 22301074 116905741 MODEL JAAIVD010000026;XM_032908708 XP_032764599 protein-coding 625897284 Atp6v1c1 ATPase H+ transporting V1 subunit C1 ENCODES a protein that exhibits proton transmembrane transporter activity (ortholog); proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN synaptic vesicle lumen acidification (ortholog); ASSOCIATED WITH DOORS syndrome (ortholog); Neoplasm Metastasis (ortholog); oral squamous cell carcinoma (ortholog); FOUND IN apical part of cell (ortholog); extrinsic component of synaptic vesicle membrane (ortholog); plasma membrane (ortholog) 1 212382048 212418278 - 22301074;30032202 116910850 MODEL JAAIVD010000025;XM_032914607;XM_032914614 XP_032770498;XP_032770505 V-type proton ATPase subunit C 1 protein-coding 625897305 LOC116890086 non-histone chromosomal protein HMG-17-like 1 226783804 226784070 - 116890086 MODEL JAAIVD010000025 pseudo 625897306 Ccdc88a coiled-coil and HOOK domain protein 88A ENCODES a protein that exhibits actin binding (ortholog); epidermal growth factor receptor binding (ortholog); G-protein alpha-subunit binding (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); cell migration (ortholog); lamellipodium assembly (ortholog); ASSOCIATED WITH microcephaly (ortholog); PEHO syndrome (ortholog); PEHO-like syndrome (ortholog); FOUND IN cell leading edge (ortholog); centriole (ortholog); centrosome (ortholog) 11 96975645 97136208 + 22301074;30032202 116912273 MODEL JAAIVD010000006;XM_032916262;XM_032916263;XM_032916264 XP_032772153;XP_032772154;XP_032772155 coiled-coil domain containing 88A;girdin protein-coding 625897350 Prdm4 PR/SET domain 4 ENCODES a protein that exhibits death receptor binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); histone methyltransferase binding (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); cellular response to nutrient (ortholog); negative regulation of cell growth (ortholog); FOUND IN cytoplasm (ortholog); histone methyltransferase complex (ortholog); nucleoplasm (ortholog) 1 162692854 162718446 + 22301074;30032202 116907314 MODEL JAAIVD010000025;XM_032910263 XP_032766154 PR domain zinc finger protein 4 protein-coding 625897366 Gpn2 GPN-loop GTPase 2 ASSOCIATED WITH Perrault Syndrome 1 (ortholog) 1 24641572 24649306 - 30032202 116895113 MODEL JAAIVD010000025;XM_032896519 XP_032752410 protein-coding 625897375 LOC116883706 glyceraldehyde-3-phosphate dehydrogenase-like 1 205747591 205750708 + 116883706 MODEL JAAIVD010000025 pseudo 625897376 LOC116909733 transmembrane protein 256-like 9 56795818 56796260 + 116909733 MODEL JAAIVD010000002;XM_032913409 XP_032769300 protein-coding 625897380 Iars2 isoleucyl-tRNA synthetase 2, mitochondrial ASSOCIATED WITH cataract (ortholog); CATARACTS, GROWTH HORMONE DEFICIENCY, SENSORY NEUROPATHY, SENSORINEURAL HEARING LOSS, AND SKELETAL DYSPLASIA (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) 10 63445642 63478505 - 22301074;30032202 116911182 MODEL JAAIVD010000005;XM_032915049 XP_032770940 isoleucine--tRNA ligase, mitochondrial protein-coding 625897407 Gng7 G protein subunit gamma 7 INVOLVED IN behavioral fear response (ortholog); locomotory behavior (ortholog); receptor guanylyl cyclase signaling pathway (ortholog); ASSOCIATED WITH Esophageal Neoplasms (ortholog); FOUND IN parallel fiber to Purkinje cell synapse (ortholog); Schaffer collateral - CA1 synapse (ortholog); synapse (ortholog) 1 153870794 153931306 + 22301074;30032202 116904640 MODEL JAAIVD010000025;XM_032907436;XM_032907437;XM_032907438 XP_032763327;XP_032763328;XP_032763329 guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7 protein-coding 625897420 Snrnp40 small nuclear ribonucleoprotein U5 subunit 40 FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); U2-type catalytic step 2 spliceosome (ortholog) 1 27766256 27798063 - 22301074;30032202 116895924 MODEL JAAIVD010000025;XM_032897001 XP_032752892 U5 small nuclear ribonucleoprotein 40 kDa protein protein-coding 625897434 Guca1b guanylate cyclase activator 1B ENCODES a protein that exhibits calcium sensitive guanylate cyclase activator activity (ortholog); guanylate cyclase regulator activity (ortholog); INVOLVED IN phototransduction (ortholog); visual perception (ortholog); PARTICIPATES IN altered visual phototransduction pathway; calcium/calcium-mediated signaling pathway; retinitis pigmentosa pathway; ASSOCIATED WITH fundus dystrophy (ortholog); Leber congenital amaurosis (ortholog); retinitis pigmentosa (ortholog); FOUND IN cilium (ortholog); cone photoreceptor outer segment (ortholog); photoreceptor inner segment (ortholog) 4 82488175 82495125 - 22301074;30032202 116898042 MODEL JAAIVD010000003;XM_032899434 XP_032755325 guanylyl cyclase-activating protein 2 protein-coding 625897442 LOC116885919 40S ribosomal protein S2-like 16 23910068 23919778 - 116885919 MODEL JAAIVD010000004 pseudo 625897443 Tarbp1 tRNA guanosine 2 -O-methyltransferase TARBP1 ENCODES a protein that exhibits tRNA (guanine(18)-2'-O-ribose)-methyltransferase activity (ortholog); INVOLVED IN tRNA methylation (ortholog) 17 45936988 45986667 - 22301074;30032202 116886085 MODEL JAAIVD010000011;XM_032887405 XP_032743296 TAR (HIV-1) RNA binding protein 1;probable methyltransferase TARBP1 protein-coding 625897477 LOC116893299 60S ribosomal protein L7a-like 2 150918115 150922644 - 116893299 MODEL JAAIVD010000001 pseudo 625897478 Gipc2 GIPC PDZ domain containing family member 2 ENCODES a protein that exhibits identical protein binding (ortholog); FOUND IN cytosol (ortholog) 3 85157747 85236440 + 22301074 116896787 MODEL JAAIVD010000012;XM_032898256 XP_032754147 PDZ domain-containing protein GIPC2 protein-coding 625897489 Klhdc9 kelch domain containing 9 ENCODES a protein that exhibits cyclin binding (ortholog) 10 50527860 50530328 - 30032202 116911524 MODEL JAAIVD010000005;XM_032915517 XP_032771408 kelch domain-containing protein 9 protein-coding 625897497 LOC116893784 60S ribosomal protein L27a-like 2 34794117 34794615 - 116893784 MODEL JAAIVD010000001 pseudo 625897498 Celf3 CUGBP Elav-like family member 3 ENCODES a protein that exhibits 7SK snRNA binding (ortholog); RNA binding (ortholog); INVOLVED IN flagellated sperm motility (ortholog); lncRNA transcription (ortholog); nuclear body organization (ortholog); ASSOCIATED WITH neuromuscular disease (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleus (ortholog) 3 62684735 62699074 - 30032202 116896585 MODEL JAAIVD010000012;XM_032897812;XM_032897813;XM_032897814;XM_032897816;XM_032897817;XM_032897818;XM_032897819;XM_032897820;XM_032897821;XM_032897822;XM_032897823;XM_032897824 XP_032753703;XP_032753704;XP_032753705;XP_032753707;XP_032753708;XP_032753709;XP_032753710;XP_032753711;XP_032753712;XP_032753713;XP_032753714;XP_032753715 protein-coding 625897541 LOC116885728 vomeronasal type-2 receptor 116-like 16 15673405 15709480 + 22301074;30032202 116885728 MODEL JAAIVD010000004;XM_032887038 XP_032742929 protein-coding 625897550 Amd1 adenosylmethionine decarboxylase 1 ENCODES a protein that exhibits adenosylmethionine decarboxylase activity (ortholog); identical protein binding (ortholog); putrescine binding (ortholog); INVOLVED IN polyamine metabolic process (ortholog); S-adenosylmethionine metabolic process (ortholog); spermidine biosynthetic process (ortholog); PARTICIPATES IN glycine N-methyltransferase deficiency pathway; homocystinuria pathway; hypermethioninemia pathway; ASSOCIATED WITH lung non-small cell carcinoma (ortholog); Overweight (ortholog); prostate cancer (ortholog); FOUND IN cytosol (ortholog) 18 40064688 40080375 - 22301074;30032202 116886918 MODEL JAAIVD010000013;XM_032888397 XP_032744288 S-adenosylmethionine decarboxylase proenzyme protein-coding 625897562 Mmadhc metabolism of cobalamin associated D ENCODES a protein that exhibits molecular carrier activity (ortholog); INVOLVED IN cobalamin metabolic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); Homocystinuria-megaloblastic anemia cblD type (ortholog); inherited metabolic disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 5 28139114 28157098 - 22301074;30032202 116901399 MODEL JAAIVD010000023;XM_032903273 XP_032759164 methylmalonic aciduria and homocystinuria type D protein, mitochondrial protein-coding 625897574 Rmp64 ribonuclease MRP subunit p64 INVOLVED IN negative regulation of neuron differentiation (ortholog); positive regulation of Notch signaling pathway (ortholog); RNA processing (ortholog); ASSOCIATED WITH anauxetic dysplasia 3 (ortholog); microcephaly (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 4 29590050 29602121 + 30032202 116898867 MODEL JAAIVD010000003;XM_032900235 XP_032756126 Nepro nucleolus and neural progenitor protein protein-coding 625897587 LOC116901846 uncharacterized LOC116901846 5 98860454 98886221 + 116901846 MODEL JAAIVD010000023;XR_004388026 ncrna 625897592 Nup62cl nucleoporin 62 C-terminal like X 91992116 92074601 + 30032202 116888926 MODEL JAAIVD010000014;XM_032890170 XP_032746061 nucleoporin-62 C-terminal-like protein protein-coding 625897605 LOC116895751 60 kDa heat shock protein, mitochondrial-like 3 35908820 35909309 + 116895751 MODEL JAAIVD010000012 pseudo 625897606 LOC116901284 protein B-Myc 5 11485454 11486414 - 30032202 116901284 MODEL JAAIVD010000023;XM_032903073 XP_032758964 protein-coding 625897611 LOC116898314 uncharacterized protein C4orf46 homolog 4 37263800 37277015 + 116898314 MODEL JAAIVD010000003 pseudo 625897612 Pdia6 protein disulfide isomerase family A member 6 ENCODES a protein that exhibits protein-disulfide reductase activity (ortholog); INVOLVED IN IRE1-mediated unfolded protein response (ortholog); negative regulation of IRE1-mediated unfolded protein response (ortholog); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway; FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum chaperone complex (ortholog); endoplasmic reticulum lumen (ortholog) 7 37069038 37082608 + 22301074;30032202 116904898 MODEL JAAIVD010000026;XM_032907506 XP_032763397 protein disulfide-isomerase A6 protein-coding 625897628 LOC116903120 alpha-enolase-like 6 7030680 7032206 - 116903120 MODEL JAAIVD010000024 pseudo 625897629 Rbm6 RNA binding motif protein 6 FOUND IN nucleus (ortholog) 8 99095281 99192813 - 22301074;30032202 116907548 MODEL JAAIVD010000027;XM_032910570;XM_032910572 XP_032766461;XP_032766463 RNA-binding protein 6 protein-coding 625897657 Tmem258 transmembrane protein 258 ENCODES a protein that exhibits oligosaccharyltransferase complex binding (ortholog); INVOLVED IN epithelial cell apoptotic process (ortholog); inflammatory response (ortholog); protein N-linked glycosylation (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); membrane (ortholog) 2 9681913 9685613 + 22301074;30032202 116890949 MODEL JAAIVD010000001;XM_032891595 XP_032747486 protein-coding 625897665 LOC116902608 small nucleolar RNA SNORA17 5 122280857 122280981 + 116902608 MODEL JAAIVD010000023 pseudo 625897666 Ppp1r37 protein phosphatase 1 regulatory subunit 37 2 171062138 171094559 + 22301074 116892525 MODEL JAAIVD010000001;XM_032894281 XP_032750172 protein-coding 625897683 LOC116884954 glyceraldehyde-3-phosphate dehydrogenase-like 15 30656046 30657089 - 116884954 MODEL JAAIVD010000010 pseudo 625897684 Ccdc17 coiled-coil domain containing 17 ASSOCIATED WITH colorectal adenocarcinoma (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog) 1 40236740 40240867 + 116898400 MODEL JAAIVD010000025;XM_032899691;XM_032899696 XP_032755582;XP_032755587 coiled-coil domain-containing protein 17 protein-coding 625897704 Nol6 nucleolar protein 6 INVOLVED IN ribosomal small subunit biogenesis (ortholog); FOUND IN condensed nuclear chromosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 1 117051868 117061713 + 30032202 116902478 MODEL JAAIVD010000025;XM_032905026 XP_032760917 protein-coding 625897734 LOC116887099 keratin-associated protein 10-1-like 18 1122312 1123550 - 22301074;30032202 116887099 MODEL JAAIVD010000013;XM_032888620;XM_032888621;XM_032888622;XM_032888624 XP_032744511;XP_032744512;XP_032744513;XP_032744515 keratin-associated protein 10-3-like;keratin-associated protein 10-8-like protein-coding 625897747 LOC116901034 sperm motility kinase-like 5 130136089 130136700 - 116901034 MODEL JAAIVD010000023 pseudo 625897748 Gja1 gap junction protein alpha 1 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-catenin binding (ortholog); beta-tubulin binding (ortholog); INVOLVED IN adult heart development (ortholog); ATP transport (ortholog); atrial ventricular junction remodeling (ortholog); PARTICIPATES IN connexin signaling pathway; N-cadherin signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); adenoma (ortholog); alcohol use disorder (ortholog); FOUND IN apical plasma membrane (ortholog); cell junction (ortholog); cell-cell contact zone (ortholog) 18 33164405 33176064 + 22301074;30032202 116887201 MODEL JAAIVD010000013;XM_032888757 XP_032744648 gap junction alpha-1 protein protein-coding 625897754 LOC116907135 barrier-to-autointegration factor-like 1 158804645 158804897 - 116907135 MODEL JAAIVD010000025 pseudo 625897755 LOC116894313 heterogeneous nuclear ribonucleoprotein A1-like 2 144681268 144682259 + 22301074 116894313 MODEL JAAIVD010000001;XM_032896009 XP_032751900 protein-coding 625897759 Espn espin ENCODES a protein that exhibits actin filament binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); locomotory behavior (ortholog); microvillar actin bundle assembly (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 36 (ortholog); Deafness (ortholog); FOUND IN actin cytoskeleton (ortholog); apical ectoplasmic specialization (ortholog); brush border (ortholog) 1 8588223 8621257 + 30032202 116892325 MODEL JAAIVD010000025;XM_032893953;XM_032893961;XM_032893971 XP_032749844;XP_032749852;XP_032749862 protein-coding 625897786 Gabra5 gamma-aminobutyric acid type A receptor subunit alpha5 ENCODES a protein that exhibits GABA receptor binding (ortholog); GABA-A receptor activity (ortholog); GABA-gated chloride ion channel activity (ortholog); INVOLVED IN associative learning (ortholog); behavioral fear response (ortholog); chemical synaptic transmission (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); bipolar disorder (ortholog); FOUND IN cell body (ortholog); dendrite (ortholog); GABA-ergic synapse (ortholog) 2 141775468 141890756 + 22301074;30032202 116892038 MODEL JAAIVD010000001;XM_032893499;XM_032893500;XM_032893502;XM_032893503;XM_032893504 XP_032749390;XP_032749391;XP_032749393;XP_032749394;XP_032749395 gamma-aminobutyric acid receptor subunit alpha-5 protein-coding 625897813 Rps6ka3 ribosomal protein S6 kinase A3 ENCODES a protein that exhibits protein kinase binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); response to lipopolysaccharide (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH bone development disease (ortholog); Coffin-Lowry syndrome (ortholog); Developmental Disabilities (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) X 33888916 33995012 - 22301074;30032202 116888961 MODEL JAAIVD010000014;XM_032890189;XM_032890190;XM_032890191;XM_032890192;XM_032890193 XP_032746080;XP_032746081;XP_032746082;XP_032746083;XP_032746084 ribosomal protein S6 kinase alpha-3 protein-coding 625897853 LOC116893146 small nuclear ribonucleoprotein E-like 2 96062138 96063496 + 116893146 MODEL JAAIVD010000001 pseudo 625897854 Areg amphiregulin ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); growth factor activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN dichotomous subdivision of terminal units involved in mammary gland duct morphogenesis (ortholog); epidermal growth factor receptor signaling pathway (ortholog); epithelial cell proliferation involved in mammary gland duct elongation (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); asthma (ortholog); breast cancer (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular region (ortholog) 11 4535263 4542455 + 30032202 116912366 MODEL JAAIVD010000006;XM_032916425 XP_032772316 protein-coding 625897863 Rwdd3 RWD domain containing 3 INVOLVED IN positive regulation of hypoxia-inducible factor-1alpha signaling pathway (ortholog); positive regulation of protein sumoylation (ortholog) 3 38712310 38727796 + 22301074;30032202 116896314 MODEL JAAIVD010000012;XM_032897403;XM_032897404;XM_032897405 XP_032753294;XP_032753295;XP_032753296 RWD domain-containing protein 3 protein-coding 625897878 Cps1 carbamoyl-phosphate synthase 1 ENCODES a protein that exhibits ATP binding (ortholog); calcium ion binding (ortholog); carbamoyl-phosphate synthase (ammonia) activity (ortholog); INVOLVED IN carbamoyl phosphate biosynthetic process (ortholog); cellular response to ammonium ion (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; AGAT deficiency pathway; arginine and proline metabolic pathway; ASSOCIATED WITH Acidoses (ortholog); alcohol-associated liver disease (ortholog); Animal Hepatitis (ortholog); FOUND IN cytosol (ortholog); mitochondrial inner membrane (ortholog); mitochondrial nucleoid (ortholog) 4 139655447 139743127 - 22301074;30032202 116898525 MODEL JAAIVD010000003;XM_032899749 XP_032755640 carbamoyl-phosphate synthase [ammonia], mitochondrial protein-coding 625897909 LOC116905797 galectin-1-like 7 94068990 94069356 - 116905797 MODEL JAAIVD010000026 pseudo 625897910 LOC116889301 40S ribosomal protein S8-like X 15292115 15292749 - 116889301 MODEL JAAIVD010000014 pseudo 625897911 LOC116886966 uncharacterized LOC116886966 18 35985669 36050250 + 30032202 116886966 MODEL JAAIVD010000013;XM_032888461 XP_032744352 uncharacterized protein LOC116886966 protein-coding 625897923 Eml5 EMAP like 5 7 111943713 112062876 - 30032202 116905348 MODEL JAAIVD010000026;XM_032908248;XM_032908250;XM_032908251;XM_032908252;XM_032908253;XM_032908254 XP_032764139;XP_032764141;XP_032764142;XP_032764143;XP_032764144;XP_032764145 echinoderm microtubule-associated protein-like 5 protein-coding 625897994 LOC116889807 50S ribosomal protein L7/L12-like 22301074;30032202 116889807 MODEL JAAIVD010000764;XM_032890654 XP_032746545 protein-coding 625897995 LOC116888896 dystrophin-like X 43775295 43799291 - 116888896 MODEL JAAIVD010000014;XM_032890157;XR_004386354 XP_032746048 protein-coding 625898005 Smim41 small integral membrane protein 41 1 261796169 261796524 - 116890215 MODEL JAAIVD010000025;XM_032890951 XP_032746842 protein-coding 625898009 Sec14l1 SEC14 like lipid binding 1 ENCODES a protein that exhibits protein sequestering activity (ortholog); RIG-I binding (ortholog); INVOLVED IN choline transport (ortholog); negative regulation of cytoplasmic pattern recognition receptor signaling pathway (ortholog); negative regulation of RIG-I signaling pathway (ortholog); ASSOCIATED WITH Monoclonal B-Cell Lymphocytosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 9 66918752 66965877 - 30032202 116908760 MODEL JAAIVD010000002;XM_032912111 XP_032768002 SEC14-like protein 1 protein-coding 625898030 Prob1 proline rich basic protein 1 FOUND IN nucleoplasm (ortholog) 15 8722869 8726679 + 30032202 116884600 MODEL JAAIVD010000010;XM_032885740 XP_032741631 proline-rich basic protein 1 protein-coding 625898034 LOC116903257 glyceraldehyde-3-phosphate dehydrogenase-like 6 22733803 22736704 + 22301074;30032202 116903257 MODEL JAAIVD010000024;XM_032905639;XM_032905640 XP_032761530;XP_032761531 protein-coding 625898044 LOC116915224 60S ribosomal protein L7a-like 14 68543214 68544462 - 116915224 MODEL JAAIVD010000009 pseudo 625898045 LOC116887862 aldose reductase-related protein 2-like X 45051638 45052334 + 116887862 MODEL JAAIVD010000014 pseudo 625898046 LOC116886276 PRAME family member 12-like 1 14412243 14422639 + 22301074;30032202 116886276 MODEL JAAIVD010000025;XM_032887702 XP_032743593 protein-coding 625898054 Dld dihydrolipoamide dehydrogenase ENCODES a protein that exhibits dihydrolipoyl dehydrogenase (NADH) activity (ortholog); flavin adenine dinucleotide binding (ortholog); lipoamide binding (ortholog); INVOLVED IN 2-oxoglutarate decarboxylation to succinyl-CoA (ortholog); 2-oxoglutarate metabolic process (ortholog); branched-chain alpha-keto acid decarboxylation to branched-chain acyl-CoA (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; ASSOCIATED WITH dihydrolipoamide dehydrogenase deficiency (ortholog); genetic disease (ortholog); lactic acidosis (ortholog); FOUND IN acrosomal matrix (ortholog); branched-chain alpha-ketoacid dehydrogenase complex (ortholog); cilium (ortholog) 7 44701254 44718605 - 22301074;30032202 116904949 MODEL JAAIVD010000026;XM_032907593 XP_032763484 dihydrolipoyl dehydrogenase, mitochondrial protein-coding 625898072 LOC116888869 immunoglobulin superfamily member 1-like X 113056748 113062415 + 116888869 MODEL JAAIVD010000014;XM_032890130 XP_032746021 protein-coding 625898087 LOC116894562 bcl-2-like protein 2 2 178552985 178553749 - 116894562 MODEL JAAIVD010000001 pseudo 625898088 LOC116913244 glutaredoxin-1-like 12 78077432 78077787 + 116913244 MODEL JAAIVD010000007 pseudo 625898089 Gabra4 gamma-aminobutyric acid type A receptor subunit alpha4 ENCODES a protein that exhibits transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential (ortholog); INVOLVED IN central nervous system development (ortholog); chloride transmembrane transport (ortholog); gamma-aminobutyric acid signaling pathway (ortholog); ASSOCIATED WITH Ataxia (ortholog); autistic disorder (ortholog); FOUND IN GABA-ergic synapse (ortholog); postsynaptic specialization membrane (ortholog) 11 28422950 28499270 - 22301074;30032202 116911938 MODEL JAAIVD010000006;XM_032915831;XM_032915832;XM_032915833 XP_032771722;XP_032771723;XP_032771724 gamma-aminobutyric acid receptor subunit alpha-4 protein-coding 625898111 Gnat3 G protein subunit alpha transducin 3 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); response to nicotine (ortholog); sensory perception of bitter taste (ortholog); ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); male infertility (ortholog); FOUND IN acrosomal vesicle (ortholog); apical plasma membrane (ortholog); axoneme (ortholog) 6 64532827 64581116 - 22301074;30032202 116903654 MODEL JAAIVD010000024;XM_032906311 XP_032762202 guanine nucleotide-binding protein G(t) subunit alpha-3 protein-coding 625898123 LOC116897630 small nucleolar RNA SNORD123 3 148582116 148582185 + 116897630 MODEL JAAIVD010000012;XR_004387610 snorna 625898126 LOC116905352 DNA polymerase alpha catalytic subunit-like 7 112965033 113006008 + 30032202 116905352 MODEL JAAIVD010000026;XM_032908266;XM_032908267 XP_032764157;XP_032764158 protein-coding 625898136 LOC116895855 vomeronasal type-2 receptor 1-like 3 90958092 90963871 + 116895855 MODEL JAAIVD010000012 pseudo 625898137 LOC116892934 glyceraldehyde-3-phosphate dehydrogenase-like 2 207826194 207827226 + 116892934 MODEL JAAIVD010000001 pseudo 625898138 LOC116900434 olfactory receptor 4C15-like 5 70684127 70685065 - 22301074 116900434 MODEL JAAIVD010000023;XM_032902175 XP_032758066 protein-coding 625898142 LOC116906326 U6 spliceosomal RNA 7 73508914 73509021 - 116906326 MODEL JAAIVD010000026;XR_004388613 snrna 625898145 Nup35 nucleoporin 35 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); ASSOCIATED WITH intestinal pseudo-obstruction (ortholog); pneumoconiosis (ortholog); FOUND IN nuclear envelope (ortholog); nuclear lamina (ortholog); nuclear membrane (ortholog) 5 57817253 57840193 + 22301074;30032202 116901569 MODEL JAAIVD010000023;XM_032903566 XP_032759457 nucleoporin NUP35 protein-coding 625898158 LOC116883590 prolactin-3B1 14 46551068 46556610 - 22301074;30032202 116883590 MODEL JAAIVD010000009;XM_032884771 XP_032740662 protein-coding 625898167 LOC116893279 evolutionarily conserved signaling intermediate in Toll pathway, mitochondrial-like 2 146211770 146212861 - 116893279 MODEL JAAIVD010000001 pseudo 625898168 Atl3 atlastin GTPase 3 ENCODES a protein that exhibits GTPase-dependent fusogenic activity (ortholog); identical protein binding (ortholog); INVOLVED IN endoplasmic reticulum membrane fusion (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); endoplasmic reticulum tubular network membrane organization (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease axonal type 2N (ortholog); genetic disease (ortholog); hereditary sensory neuropathy type 1F (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum tubular network (ortholog) 2 245314 290440 - 22301074;30032202 116894793 MODEL JAAIVD010000001;XM_032896446 XP_032752337 atlastin-3 protein-coding 625898185 Tex47 testis expressed 47 6 139924556 139925373 - 116904135 MODEL JAAIVD010000024;XM_032907025 XP_032762916 testis-expressed protein 47 protein-coding 625898189 Myo5a myosin VA ENCODES a protein that exhibits actin binding (ortholog); ATP binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN actin filament-based movement (ortholog); axo-dendritic protein transport (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; ASSOCIATED WITH dystonia (ortholog); Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); FOUND IN actin filament (ortholog); actomyosin (ortholog); actomyosin, myosin complex part (ortholog) 8 69350857 69513052 + 22301074;30032202 116908001 MODEL JAAIVD010000027;XM_032911256 XP_032767147 unconventional myosin-Va protein-coding 625898234 LOC116894831 U6 spliceosomal RNA 2 22838561 22838667 + 116894831 MODEL JAAIVD010000001;XR_004387046 snrna 625898237 Mbd1 methyl-CpG binding domain protein 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); double-stranded methylated DNA binding (ortholog); INVOLVED IN epigenetic regulation of gene expression (ortholog); negative regulation of astrocyte differentiation (ortholog); negative regulation of gene expression (ortholog); PARTICIPATES IN DNA modification pathway; ASSOCIATED WITH autistic disorder (ortholog); Experimental Seizures (ortholog); lung cancer (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); heterochromatin (ortholog) 15 57666542 57681023 - 22301074 116884302 MODEL JAAIVD010000010;XM_032885403;XM_032885404;XM_032885406;XM_032885407;XM_032885408;XM_032885409;XM_032885410;XM_032885411;XM_032885412;XR_004385864 XP_032741294;XP_032741295;XP_032741297;XP_032741298;XP_032741299;XP_032741300;XP_032741301;XP_032741302;XP_032741303 methyl-CpG-binding domain protein 1 protein-coding 625898275 Dhcr24 24-dehydrocholesterol reductase ENCODES a protein that exhibits Delta24(24-1) sterol reductase activity (ortholog); Delta24-sterol reductase activity (ortholog); enzyme binding (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); cholesterol biosynthetic process (ortholog); cholesterol biosynthetic process via desmosterol (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); autism spectrum disorder (ortholog); COVID-19 (ortholog); FOUND IN endoplasmic reticulum (ortholog); nucleus (ortholog) 1 48217656 48244095 - 22301074;30032202 116899410 A0A8A1UEX5 MODEL JAAIVD010000025;XM_032901151 XP_032757042 delta(24)-sterol reductase protein-coding 625898288 LOC116895637 V-type proton ATPase subunit e 1-like 3 176437486 176437764 - 116895637 MODEL JAAIVD010000012 pseudo 625898289 Ints2 integrator complex subunit 2 INVOLVED IN regulation of transcription elongation by RNA polymerase II (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); snRNA processing (ortholog); ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); FOUND IN cytoplasm (ortholog); INTAC complex (ortholog); integrator complex (ortholog) 9 84515988 84561737 + 22301074;30032202 116908725 MODEL JAAIVD010000002;XM_032912069 XP_032767960 protein-coding 625898317 LOC116913362 uncharacterized LOC116913362 12 60218123 60221915 - 116913362 MODEL JAAIVD010000007;XR_004389612 ncrna 625898321 LOC116885434 uncharacterized LOC116885434 16 16239401 16241003 - 116885434 MODEL JAAIVD010000004;XR_004386007 ncrna 625898325 Tbcc tubulin folding cofactor C ENCODES a protein that exhibits GTPase activator activity (ortholog); GTPase activity (ortholog); INVOLVED IN post-chaperonin tubulin folding pathway (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); photoreceptor connecting cilium (ortholog) 4 82981604 82982803 - 22301074;30032202 116899092 MODEL JAAIVD010000003;XM_032900600 XP_032756491 tubulin-specific chaperone C protein-coding 625898330 LOC116884566 protocadherin beta-18-like 15 1142009 1145075 + 22301074 116884566 MODEL JAAIVD010000010;XM_032885708 XP_032741599 protein-coding 625898335 LOC116902991 ubiquitin-conjugating enzyme E2 variant 2-like 1 122865033 122865463 + 116902991 MODEL JAAIVD010000025 pseudo 625898336 Sh3yl1 SH3 and SYLF domain containing 1 ENCODES a protein that exhibits phosphatase binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN phosphatidylinositol biosynthetic process (ortholog); regulation of ruffle assembly (ortholog); FOUND IN ruffle membrane (ortholog) 7 44309963 44351044 + 22301074;30032202 116904944 MODEL JAAIVD010000026;XM_032907589 XP_032763480 SH3 domain-containing YSC84-like protein 1 protein-coding 625898350 LOC116890909 uncharacterized LOC116890909 2 8866924 8883096 - 116890909 MODEL JAAIVD010000001;XR_004386794 ncrna 625898355 Rpl28 ribosomal protein L28 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH middle cerebral artery infarction (ortholog); Weight Gain (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog) 2 177369622 177371230 + 30032202 116892670 MODEL JAAIVD010000001;XM_032894498 XP_032750389 60S ribosomal protein L28 protein-coding 625898364 Golgb1 golgin B1 INVOLVED IN chondrocyte proliferation (ortholog); protein localization to pericentriolar material (ortholog); ASSOCIATED WITH cleft palate (ortholog); osteochondrodysplasia (ortholog); FOUND IN cis-Golgi network (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog) 4 21757163 21805236 + 30032202 116898830 MODEL JAAIVD010000003;XM_032900183 XP_032756074 golgin subfamily B member 1 protein-coding 625898391 LOC116883587 histone H3.1-like 14 41952004 41976608 - 22301074;30032202 116883587 MODEL JAAIVD010000009;XM_032884768 XP_032740659 protein-coding 625898398 Atf7ip2 activating transcription factor 7 interacting protein 2 9 12084991 12131598 - 30032202 116909926 MODEL JAAIVD010000002;XM_032913695 XP_032769586 activating transcription factor 7-interacting protein 2 protein-coding 625898413 LOC116912519 40S ribosomal protein S16-like 11 79161180 79161647 - 22301074;30032202 116912519 MODEL JAAIVD010000006;XM_032916610 XP_032772501 protein-coding 625898418 Tnfrsf11b TNF receptor superfamily member 11b ENCODES a protein that exhibits heparan sulfate binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); negative regulation of bone resorption (ortholog); negative regulation of odontogenesis of dentin-containing tooth (ortholog); ASSOCIATED WITH Alveolar Bone Loss (ortholog); aortic valve stenosis (ortholog); bipolar disorder (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) 1 228712769 228739959 - 22301074 116911439 MODEL JAAIVD010000025;XM_032915410 XP_032771301 tumor necrosis factor receptor superfamily member 11B protein-coding 625898427 Wdcp WD repeat and coiled coil containing ENCODES a protein that exhibits kinase binding (ortholog); INVOLVED IN protein complex oligomerization (ortholog) 7 25483599 25498983 + 30032202 116906286 MODEL JAAIVD010000026;XM_032909175;XM_032909176;XM_032909177 XP_032765066;XP_032765067;XP_032765068 WD repeat and coiled-coil-containing protein protein-coding 625898441 LOC116893479 zinc finger protein 54-like 2 180741624 180743043 - 116893479 MODEL JAAIVD010000001 pseudo 625898442 Plpp1 phospholipid phosphatase 1 ENCODES a protein that exhibits ceramide-1-phosphate phosphatase activity (ortholog); diacylglycerol diphosphate phosphatase activity (ortholog); lipid phosphatase activity (ortholog); INVOLVED IN ceramide metabolic process (ortholog); phospholipid catabolic process (ortholog); phospholipid dephosphorylation (ortholog); PARTICIPATES IN D-glycericacidemia pathway; Fabry disease pathway; familial lipoprotein lipase deficiency pathway; ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); caveola (ortholog); membrane (ortholog) 3 183925678 183987128 - 30032202 116897187 MODEL JAAIVD010000012;XM_032898878;XM_032898879;XM_032898881;XM_032898882 XP_032754769;XP_032754770;XP_032754772;XP_032754773 protein-coding 625898462 LOC116914860 40S ribosomal protein S15a-like 13 53739359 53739760 - 116914860 MODEL JAAIVD010000008 pseudo 625898463 LOC116901387 uncharacterized LOC116901387 5 23118481 23122092 + 116901387 MODEL JAAIVD010000023;XM_032903258 XP_032759149 uncharacterized protein LOC116901387 protein-coding 625898470 Tmem11 transmembrane protein 11 INVOLVED IN mitochondrion organization (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 12 8575779 8576944 + 22301074;30032202 116913400 MODEL JAAIVD010000007;XM_032917582 XP_032773473 transmembrane protein 11, mitochondrial protein-coding 625898475 LOC116887211 60S ribosomal protein L27-like 18 33565262 33565743 + 116887211 MODEL JAAIVD010000013;XR_004386204 pseudo 625898478 Sirt2 sirtuin 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); histone acetyltransferase binding (ortholog); INVOLVED IN cellular response to caloric restriction (ortholog); cellular response to epinephrine stimulus (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN histone modification pathway; Sirtuin mediated pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); cocaine dependence (ortholog); high grade glioma (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); chromosome (ortholog) 2 167216022 167239828 - 22301074 116892377 MODEL JAAIVD010000001;XM_032894039;XM_032894040 XP_032749930;XP_032749931 NAD-dependent protein deacetylase sirtuin-2 protein-coding 625898501 LOC116891782 60S ribosomal protein L7a-like 2 100363735 100364519 - 116891782 MODEL JAAIVD010000001 pseudo 625898502 LOC116899213 uncharacterized LOC116899213 4 88464944 88472091 + 116899213 MODEL JAAIVD010000003;XR_004387697 ncrna 625898507 Hipk4 homeodomain interacting protein kinase 4 ENCODES a protein that exhibits histone kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN peptidyl-serine phosphorylation (ortholog); protein autophosphorylation (ortholog); protein phosphorylation (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 2 168413946 168423828 - 22301074;30032202 116892424 MODEL JAAIVD010000001;XM_032894111 XP_032750002 homeodomain-interacting protein kinase 4 protein-coding 625898515 LOC116902463 U6 spliceosomal RNA 5 51930014 51930118 - 116902463 MODEL JAAIVD010000023;XR_004388081 snrna 625898518 Nat8l N-acetyltransferase 8 like ENCODES a protein that exhibits L-aspartate N-acetyltransferase activity (ortholog); INVOLVED IN acetate metabolic process (ortholog); aspartate metabolic process (ortholog); positive regulation of dopamine uptake involved in synaptic transmission (ortholog); ASSOCIATED WITH microcephaly (ortholog); N-Acetylaspartate Deficiency (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); mitochondrial matrix (ortholog) 11 70869970 70879038 - 30032202 116912270 MODEL JAAIVD010000006;XM_032916259 XP_032772150 N-acetylaspartate synthetase protein-coding 625898525 Lpgat1 lysophosphatidylglycerol acyltransferase 1 ENCODES a protein that exhibits 2-acylglycerol O-acyltransferase activity (ortholog); 2-acylglycerophosphocholine O-acyltransferase activity (ortholog); lysophosphatidylethanolamine acyltransferase activity (ortholog); INVOLVED IN phosphatidylethanolamine acyl-chain remodeling (ortholog); positive regulation of fatty acid biosynthetic process (ortholog); triglyceride biosynthetic process (ortholog); ASSOCIATED WITH Weight Gain (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog) 10 69806775 69873142 + 22301074;30032202 116910996 MODEL JAAIVD010000005;XM_032914712;XM_032914713;XM_032914714;XM_032914715 XP_032770603;XP_032770604;XP_032770605;XP_032770606 acyl-CoA:lysophosphatidylglycerol acyltransferase 1 protein-coding 625898547 Tcp11 t-complex 11 INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cAMP/PKA signal transduction (ortholog); germ cell development (ortholog); FOUND IN acrosomal vesicle (ortholog); sperm flagellum (ortholog); sperm midpiece (ortholog) 18 5779277 5788961 + 30032202 116887121 MODEL JAAIVD010000013;XM_032888669 XP_032744560 T-complex protein 11 homolog protein-coding 625898561 LOC116889695 signal recognition particle receptor FtsY-like 22301074;30032202 116889695 MODEL JAAIVD010000052;XM_032890582 XP_032746473 protein-coding 625898562 LOC116911885 U6 spliceosomal RNA 10 12115864 12115970 + 116911885 MODEL JAAIVD010000005;XR_004389399 snrna 625898565 LOC116912552 arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2-like 11 43124225 43140025 + 22301074 116912552 MODEL JAAIVD010000006;XM_032916653 XP_032772544 protein-coding 625898572 LOC116897062 uncharacterized LOC116897062 1 35081112 35082662 + 116897062 MODEL JAAIVD010000025;XR_004387393 ncrna 625898577 Nif3l1 NGG1 interacting factor 3 like 1 ENCODES a protein that exhibits identical protein binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); neuron differentiation (ortholog); positive regulation of DNA-templated transcription (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 4 133938694 133959146 - 30032202 116899429 MODEL JAAIVD010000003;XM_032901178;XM_032901179;XM_032901180;XM_032901181;XM_032901182 XP_032757069;XP_032757070;XP_032757071;XP_032757072;XP_032757073 NIF3-like protein 1 protein-coding 625898599 Bmp10 bone morphogenetic protein 10 ENCODES a protein that exhibits growth factor activity (ortholog); hormone activity (ortholog); receptor serine/threonine kinase binding (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); adult heart development (ortholog); atrial cardiac muscle tissue morphogenesis (ortholog); ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); Fibrosis (ortholog); Left Ventricular Hypertrophy (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular region (ortholog) 6 58890292 58895838 - 22301074;30032202 116902740 MODEL JAAIVD010000024;XM_032905087 XP_032760978 protein-coding 625898603 LOC116909181 olfactory receptor 1496-like 9 92689227 92690165 - 22301074;30032202 116909181 MODEL JAAIVD010000002;XM_032912674 XP_032768565 protein-coding 625898606 LOC116914992 palladin-like 13 27153922 27154943 + 116914992 MODEL JAAIVD010000008;XM_032919400 XP_032775291 protein-coding 625898610 LOC116907831 TATA element modulatory factor-like 8 6013983 6016310 - 116907831 MODEL JAAIVD010000027 pseudo 625898611 LOC116902565 small nucleolar RNA SNORA48 5 86513073 86513216 - 116902565 MODEL JAAIVD010000023;XR_004388161 snorna 625898614 LOC116907140 ubiquitin-conjugating enzyme E2 J2-like 8 49813066 49818185 - 116907140 MODEL JAAIVD010000027 pseudo 625898615 Dpy19l2 dpy-19 like 2 INVOLVED IN spermatid development (ortholog); ASSOCIATED WITH genetic disease (ortholog); spermatogenic failure 9 (ortholog); FOUND IN nuclear inner membrane (ortholog) 8 20565726 20671241 - 30032202 116907243 MODEL JAAIVD010000027;XM_032910202 XP_032766093 probable C-mannosyltransferase DPY19L2 protein-coding 625898640 LOC116900776 60S ribosomal protein L39-like 1 118534969 118535133 - 116900776 MODEL JAAIVD010000025 pseudo 625898641 Osgepl1 O-sialoglycoprotein endopeptidase like 1 ENCODES a protein that exhibits tRNA N(6)-L-threonylcarbamoyladenine synthase activity (ortholog); INVOLVED IN tRNA threonylcarbamoyladenosine modification (ortholog); FOUND IN mitochondrion (ortholog) 4 121941581 121955651 - 22301074;30032202 116899359 MODEL JAAIVD010000003;XM_032901068;XR_004387719 XP_032756959 probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial protein-coding 625898655 LOC116894233 rho-related GTP-binding protein RhoN-like 2 111163156 111163818 + 116894233 MODEL JAAIVD010000001 pseudo 625898656 Crisp1 cysteine rich secretory protein 1 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); regulation of acrosome reaction (ortholog) 4 95877736 95902534 - 30032202 116898097 MODEL JAAIVD010000003;XM_032899482 XP_032755373 cysteine-rich secretory protein 1 protein-coding 625898668 Ryr2 ryanodine receptor 2 ENCODES a protein that exhibits calcium channel activity (ortholog); calcium-induced calcium release activity (ortholog); calmodulin binding (ortholog); INVOLVED IN calcium ion export (ortholog); calcium ion transmembrane import into cytosol (ortholog); calcium ion transmembrane transport (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); arrhythmogenic right ventricular dysplasia 1 (ortholog); arrhythmogenic right ventricular dysplasia 9 (ortholog); FOUND IN A band (ortholog); calcium channel complex (ortholog); extrinsic component of cytoplasmic side of plasma membrane (ortholog) 14 24961087 25354508 - 22301074;30032202 116883960 MODEL JAAIVD010000009;XM_032885202 XP_032741093 protein-coding 625898776 Vasp vasodilator stimulated phosphoprotein ENCODES a protein that exhibits identical protein binding (ortholog); profilin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament polymerization (ortholog); axon guidance (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cell junction (ortholog); filopodium (ortholog); focal adhesion (ortholog) 2 171345745 171361543 + 22301074;30032202 116892541 MODEL JAAIVD010000001;XM_032894304;XM_032894305;XM_032894306;XM_032894307 XP_032750195;XP_032750196;XP_032750197;XP_032750198 vasodilator-stimulated phosphoprotein protein-coding 625898804 LOC116906514 U4 spliceosomal RNA 7 26150803 26150957 + 116906514 MODEL JAAIVD010000026 pseudo 625898805 LOC116892828 solute carrier family 22 member 1 2 191378143 191405105 - 22301074;30032202 116892828 MODEL JAAIVD010000001;XM_032894710;XM_032894711 XP_032750601;XP_032750602 protein-coding 625898823 LOC116912071 zinc finger CCCH domain-containing protein 15-like 1 237391435 237393155 + 22301074;30032202 116912071 MODEL JAAIVD010000025;XM_032915938 XP_032771829 protein-coding 625898828 C7H14orf180 chromosome 7 C14orf180 homolog ASSOCIATED WITH hepatocellular carcinoma (ortholog) 7 130092573 130099681 + 116905923 MODEL JAAIVD010000026;XM_032908914 XP_032764805 nutritionally-regulated adipose and cardiac enriched protein homolog protein-coding 625898837 Nutm1 NUT midline carcinoma family member 1 5 90573416 90584669 - 116901738 MODEL JAAIVD010000023;XM_032903874 XP_032759765 NUT family member 1 protein-coding 625898848 LOC116904380 amiloride-sensitive amine oxidase [copper-containing]-like 6 91996582 91997531 - 116904380 MODEL JAAIVD010000024 pseudo 625898849 Mrps24 mitochondrial ribosomal protein S24 FOUND IN mitochondrion (ortholog) 11 74667555 74671358 - 22301074;30032202 116912104 MODEL JAAIVD010000006;XM_032916002 XP_032771893 28S ribosomal protein S24, mitochondrial protein-coding 625898857 LOC116885046 small nucleolar RNA SNORA17 15 43366419 43366549 + 116885046 MODEL JAAIVD010000010;XR_004385932 snorna 625898860 LOC116890510 small nucleolar RNA SNORA48 1 199828948 199829089 - 116890510 MODEL JAAIVD010000025;XR_004386694 snorna 625898863 Cdadc1 cytidine and dCMP deaminase domain containing 1 ENCODES a protein that exhibits cytidine deaminase activity (ortholog); dCTP deaminase activity (ortholog); importin-alpha family protein binding (ortholog); INVOLVED IN DNA cytosine deamination (ortholog); dUTP biosynthetic process (ortholog); protein homotrimerization (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 12 64790209 64819334 + 22301074;30032202 116913124 MODEL JAAIVD010000007;XM_032917282;XM_032917283 XP_032773173;XP_032773174 cytidine and dCMP deaminase domain-containing protein 1 protein-coding 625898882 LOC116892627 vomeronasal type-1 receptor 2-like 2 173979625 173980581 - 22301074;30032202 116892627 MODEL JAAIVD010000001;XM_032894445 XP_032750336 protein-coding 625898885 LOC116911528 5' exonuclease Apollo-like 10 35952714 35953786 - 116911528 MODEL JAAIVD010000005 pseudo 625898886 LOC116894666 trace amine-associated receptor 4 2 210021354 210022397 + 22301074;30032202 116894666 MODEL JAAIVD010000001;XM_032896369 XP_032752260 protein-coding 625898889 LOC116914863 beta-defensin 1 13 64682531 64697377 - 22301074;30032202 116914863 MODEL JAAIVD010000008;XM_032919311 XP_032775202 protein-coding 625898895 Hoxc12 homeobox C12 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog) 1 260144357 260145959 - 22301074;30032202 116890190 MODEL JAAIVD010000025;XM_032890926 XP_032746817 homeobox protein Hox-C12 protein-coding 625898899 LOC116892713 zinc finger protein 419-like 2 179050057 179056079 + 30032202 116892713 MODEL JAAIVD010000001;XM_032894579 XP_032750470 protein-coding 625898908 Ddx20 DEAD-box helicase 20 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); histone deacetylase binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); FOUND IN cytosol (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 3 52446624 52454740 + 22301074;30032202 116896419 MODEL JAAIVD010000012;XM_032897564 XP_032753455 probable ATP-dependent RNA helicase DDX20 protein-coding 625898923 Rangrf RAN guanine nucleotide release factor ENCODES a protein that exhibits channel activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); mitotic spindle assembly (ortholog); positive regulation of membrane depolarization during cardiac muscle cell action potential (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); Cardiac Arrhythmias (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 48568895 48570268 - 30032202 116909631 MODEL JAAIVD010000002;XM_032913270 XP_032769161 protein-coding 625898932 Dnajb5 DnaJ heat shock protein family (Hsp40) member B5 ENCODES a protein that exhibits protein-folding chaperone binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); response to unfolded protein (ortholog); ASSOCIATED WITH myopathy (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) 1 3551897 3560589 - 22301074;30032202 116891220 MODEL JAAIVD010000025;XM_032892063;XM_032892072;XM_032892081 XP_032747954;XP_032747963;XP_032747972 dnaJ homolog subfamily B member 5 protein-coding 625898946 Fga fibrinogen alpha chain ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); signaling receptor binding (ortholog); structural molecule activity (ortholog); INVOLVED IN acute-phase response (ortholog); blood coagulation (ortholog); blood coagulation, common pathway (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); Acute Lung Injury (ortholog); FOUND IN blood microparticle (ortholog); cell cortex (ortholog); cell surface (ortholog) 3 70491353 70498618 - 22301074;30032202 116896746 MODEL JAAIVD010000012;XM_032898188 XP_032754079 protein-coding 625898956 Hspbap1 HSPB1 associated protein 1 4 20547448 20602990 + 30032202 116898812 MODEL JAAIVD010000003;XM_032900163 XP_032756054 HSPB1-associated protein 1 protein-coding 625898968 LOC116908041 zinc finger protein 844-like 8 115263180 115265336 + 116908041 MODEL JAAIVD010000027;XM_032911315 XP_032767206 protein-coding 625898973 LOC116899903 small nucleolar RNA SNORA17 4 37194911 37195027 - 116899903 MODEL JAAIVD010000003 pseudo 625898974 Limd1 LIM domain containing 1 ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN miRNA-mediated gene silencing by inhibition of translation (ortholog); miRNA-mediated post-transcriptional gene silencing (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); FOUND IN adherens junction (ortholog); cytoplasm (ortholog); focal adhesion (ortholog) 8 114596387 114646805 + 30032202 116908026 MODEL JAAIVD010000027;XM_032911290;XM_032911291 XP_032767181;XP_032767182 LIM domain-containing protein 1;LIM domains containing 1 protein-coding 625898989 Tssk2 testis specific serine kinase 2 ENCODES a protein that exhibits magnesium ion binding (ortholog); protein serine/threonine kinase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN peptidyl-serine phosphorylation (ortholog); protein autophosphorylation (ortholog); spermatid development (ortholog); FOUND IN acrosomal vesicle (ortholog); centriole (ortholog); cytoplasm (ortholog) 4 3164202 3165552 + 22301074;30032202 116898657 MODEL JAAIVD010000003;XM_032899891 XP_032755782 testis-specific serine/threonine-protein kinase 2 protein-coding 625898994 LOC116911575 developmental pluripotency-associated protein 2-like 10 14295659 14296573 - 116911575 MODEL JAAIVD010000005 pseudo 625898995 LOC116911939 uncharacterized LOC116911939 11 25459456 25513996 - 30032202 116911939 MODEL JAAIVD010000006;XM_032915834 XP_032771725 uncharacterized protein LOC116911939 protein-coding 625899003 Fkbp4 FKBP prolyl isomerase 4 ENCODES a protein that exhibits ATP binding (ortholog); copper-dependent protein binding (ortholog); GTP binding (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); copper ion transport (ortholog); embryo implantation (ortholog); PARTICIPATES IN aldosterone signaling pathway; cortisol signaling pathway; estrogen signaling pathway; ASSOCIATED WITH androgen insensitivity syndrome (ortholog); FOUND IN axonal growth cone (ortholog); cytosol (ortholog); neuronal cell body (ortholog) 6 19265028 19273062 + 22301074 116903211 MODEL JAAIVD010000024;XM_032905584 XP_032761475 peptidyl-prolyl cis-trans isomerase FKBP4 protein-coding 625899017 Nanog Nanog homeobox ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell dedifferentiation (ortholog); cell differentiation (ortholog); cellular response to erythropoietin (ortholog); PARTICIPATES IN DNA modification pathway; ASSOCIATED WITH colon cancer (ortholog); Germ Cell and Embryonal Neoplasms (ortholog); Neoplastic Cell Transformation (ortholog); FOUND IN chromatin (ortholog); condensed chromosome (ortholog); nucleolus (ortholog) 6 24378513 24386158 - 22301074;30032202 116904599 MODEL JAAIVD010000024;XM_032907394;XM_032907395;XM_032907396 XP_032763285;XP_032763286;XP_032763287 homeobox protein NANOG protein-coding 625899030 Pex14 peroxisomal biogenesis factor 14 ENCODES a protein that exhibits beta-tubulin binding (ortholog); identical protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN cellular response to reactive oxygen species (ortholog); microtubule anchoring (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN adrenoleukodystrophy pathway; carnitine-acylcarnitine translocase deficiency; fatty acid beta degradation pathway; ASSOCIATED WITH genetic disease (ortholog); ovarian cyst (ortholog); peroxisomal biogenesis disorder (ortholog); FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog); protein-containing complex (ortholog) 1 11674848 11811973 + 30032202 116892701 MODEL JAAIVD010000025;XM_032894566 XP_032750457 peroxisomal membrane protein PEX14 protein-coding 625899043 Ggt6 gamma-glutamyltransferase 6 PARTICIPATES IN glutathione metabolic pathway; glutathione synthase deficiency pathway; glutathionuria disease pathway 9 43080990 43084548 - 30032202 116910145 MODEL JAAIVD010000002;XM_032913994 XP_032769885 glutathione hydrolase 6 protein-coding 625899051 Rara retinoic acid receptor alpha ENCODES a protein that exhibits alpha-actinin binding (ortholog); chromatin binding (ortholog); chromatin DNA binding (ortholog); INVOLVED IN apoptotic cell clearance (ortholog); bone development (ortholog); cellular response to estrogen stimulus (ortholog); PARTICIPATES IN retinoic acid signaling pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); Breast Neoplasms (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 55468152 55513456 - 22301074;30032202 116909131 MODEL JAAIVD010000002;XM_032912613;XM_032912614;XM_032912615;XM_032912616 XP_032768504;XP_032768505;XP_032768506;XP_032768507 protein-coding 625899072 LOC116890139 lymphocyte antigen 6B-like 1 247740335 247744159 - 30032202 116890139 MODEL JAAIVD010000025;XM_032890876 XP_032746767 protein-coding 625899080 LOC116903201 C-type lectin domain family 2 member D2-like 6 18966730 18974584 - 30032202 116903201 MODEL JAAIVD010000024;XM_032905578 XP_032761469 protein-coding 625899087 Strap serine/threonine kinase receptor associated protein ENCODES a protein that exhibits mRNA binding (ortholog); signaling receptor binding (ortholog); U2 snRNP binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); cell differentiation (ortholog); maintenance of gastrointestinal epithelium (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); colorectal carcinoma (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 6 11684541 11699681 - 22301074;30032202 116903144 MODEL JAAIVD010000024;XM_032905508 XP_032761399 serine-threonine kinase receptor-associated protein protein-coding 625899101 LOC116913374 coiled-coil domain-containing protein 70-like 12 28642957 28644451 - 116913374 MODEL JAAIVD010000007;XM_032917544 XP_032773435 protein-coding 625899107 Ddx42 DEAD-box helicase 42 ENCODES a protein that exhibits RNA binding (ortholog); RNA helicase activity (ortholog); INVOLVED IN intracellular protein localization (ortholog); regulation of apoptotic process (ortholog); U2-type prespliceosome assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Cachexia (ortholog); myelodysplastic syndrome (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleus (ortholog) 9 72870588 72902523 - 22301074 116909826 MODEL JAAIVD010000002;XM_032913542;XM_032913543;XM_032913544 XP_032769433;XP_032769434;XP_032769435 ATP-dependent RNA helicase DDX42 protein-coding 625899135 Spon2 spondin 2 ENCODES a protein that exhibits antigen binding (ortholog); lipopolysaccharide binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN cell adhesion (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to platelet-derived growth factor stimulus (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Carotid Artery Injuries (ortholog); meningioma (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) 11 71621320 71627976 + 30032202 116912756 MODEL JAAIVD010000006;XM_032916907 XP_032772798 spondin-2 protein-coding 625899145 LOC116889706 tRNA (guanine-N(1)-)-methyltransferase-like 22301074;30032202 116889706 MODEL JAAIVD010000059;XM_032890588 XP_032746479 protein-coding 625899146 LOC116893705 olfactory receptor 5B12-like 2 13260579 13261526 + 22301074;30032202 116893705 MODEL JAAIVD010000001;XM_032895421 XP_032751312 protein-coding 625899149 LOC116906176 proliferation-associated protein 2G4-like 7 107290621 107433762 - 116906176 MODEL JAAIVD010000026 pseudo 625899150 Mtg1 mitochondrial ribosome associated GTPase 1 ENCODES a protein that exhibits GTPase activity (ortholog); INVOLVED IN mitochondrial large ribosomal subunit assembly (ortholog); regulation of mitochondrial translation (ortholog); regulation of respiratory system process (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrial ribosome (ortholog) 2 61721028 61733621 - 22301074;30032202 116891348 MODEL JAAIVD010000001;XM_032892339;XM_032892340 XP_032748230;XP_032748231 mitochondrial ribosome-associated GTPase 1 protein-coding 625899167 LOC116900774 protein WFDC9 5 153302745 153313669 + 116900774 MODEL JAAIVD010000023;XM_032902486 XP_032758377 protein-coding 625899175 LOC116886619 uncharacterized LOC116886619 17 14743410 14780933 - 116886619 MODEL JAAIVD010000011;XM_032888126 XP_032744017 uncharacterized protein LOC116886619 protein-coding 625899188 Ssmem1 serine rich single-pass membrane protein 1 INVOLVED IN spermatogenesis (ortholog) 6 109040978 109051361 - 116902911 MODEL JAAIVD010000024;XM_032905238;XM_032905239 XP_032761129;XP_032761130 serine-rich single-pass membrane protein 1 protein-coding 625899197 Rasgef1b RasGEF domain family member 1B ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); ASSOCIATED WITH COVID-19 (ortholog); systemic juvenile rheumatoid arthritis (ortholog) 11 9465540 9818730 - 22301074;30032202 116912794 MODEL JAAIVD010000006;XM_032916956;XM_032916957;XM_032916958 XP_032772847;XP_032772848;XP_032772849 ras-GEF domain-containing family member 1B protein-coding 625899221 LOC116893184 ubiquitin carboxyl-terminal hydrolase 17-like protein A 2 103715648 103719483 - 22301074;30032202 116893184 MODEL JAAIVD010000001;XM_032895087 XP_032750978 protein-coding 625899225 Ak6 adenylate kinase 6 ENCODES a protein that exhibits AMP kinase activity (ortholog); FOUND IN Cajal body (ortholog); nuclear speck (ortholog); nucleolus (ortholog) 3 158035070 158046934 + 22301074;30032202 116897095 MODEL JAAIVD010000012;XM_032898736 XP_032754627 adenylate kinase isoenzyme 6 protein-coding 625899234 Pdzk1 PDZ domain containing 1 ENCODES a protein that exhibits identical protein binding (ortholog); PDZ domain binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN carnitine transmembrane transport (ortholog); in utero embryonic development (ortholog); positive regulation of protein localization to membrane (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Breast Neoplasms (ortholog); Prostatic Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); brush border (ortholog); brush border membrane (ortholog) 3 60441236 60472295 - 30032202 116896492 MODEL JAAIVD010000012;XM_032897665;XM_032897666;XM_032897667 XP_032753556;XP_032753557;XP_032753558 Na(+)/H(+) exchange regulatory cofactor NHE-RF3 protein-coding 625899252 Neurl3 neuralized E3 ubiquitin protein ligase 3 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN positive regulation of proteasomal protein catabolic process (ortholog); protein ubiquitination (ortholog); FOUND IN cytoplasm (ortholog) 4 112485463 112493915 - 116899285 MODEL JAAIVD010000003;XM_032900916 XP_032756807 E3 ubiquitin-protein ligase NEURL3 protein-coding 625899261 LOC116894017 olfactory receptor 51G2-like 2 101877164 101878123 + 22301074 116894017 MODEL JAAIVD010000001;XM_032895732 XP_032751623 protein-coding 625899264 Maz MYC associated zinc finger protein ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of apoptotic signaling pathway (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of cell migration (ortholog); ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 74866968 74871271 + 30032202 116891490 MODEL JAAIVD010000001;XM_032892594 XP_032748485 myc-associated zinc finger protein protein-coding 625899273 LOC116894418 keratin-associated protein 19-3-like 2 158728061 158728306 - 116894418 MODEL JAAIVD010000001;XM_032896123 XP_032752014 protein-coding 625899276 Tmem106c transmembrane protein 106C 1 270774815 270780605 + 116884603 MODEL JAAIVD010000025;XM_032885746 XP_032741637 protein-coding 625899288 Krtcap3 keratinocyte associated protein 3 ASSOCIATED WITH short-rib thoracic dysplasia 10 with or without polydactyly (ortholog) 7 22827264 22828830 - 116905973 MODEL JAAIVD010000026;XM_032908981;XM_032908983 XP_032764872;XP_032764874 keratinocyte-associated protein 3 protein-coding 625899301 LOC116915217 prolactin-like 14 46514710 46525488 - 22301074;30032202 116915217 MODEL JAAIVD010000009;XM_032919597 XP_032775488 protein-coding 625899309 LOC116889575 U6 spliceosomal RNA X 7688382 7688491 - 116889575 MODEL JAAIVD010000014;XR_004386491 snrna 625899312 LOC116894354 glandular kallikrein-7, submandibular/renal 2 155370997 155374990 - 22301074;30032202 116894354 MODEL JAAIVD010000001;XM_032896053;XM_032896054 XP_032751944;XP_032751945 protein-coding 625899322 LOC116901698 olfactory receptor 1J4-like 5 82054102 82055040 + 22301074;30032202 116901698 MODEL JAAIVD010000023;XM_032903827 XP_032759718 protein-coding 625899325 Fam178b family with sequence similarity 178 member B 4 112786350 112872276 - 116898137 MODEL JAAIVD010000003;XM_032899511;XM_032899512;XM_032899513 XP_032755402;XP_032755403;XP_032755404 protein FAM178B protein-coding 625899349 Cbr3 carbonyl reductase 3 ENCODES a protein that exhibits 3-beta-hydroxysteroid 3-dehydrogenase (NADP+) activity (ortholog); carbonyl reductase (NADPH) activity (ortholog); NADPH binding (ortholog); INVOLVED IN cognition (ortholog); phylloquinone catabolic process (ortholog); PARTICIPATES IN doxorubicin pharmacokinetics pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Familial Platelet Disorder with Associated Myeloid Malignancy (ortholog); Mouth Neoplasms (ortholog); FOUND IN cytosol (ortholog) 4 50945959 50954683 - 30032202 116898973 MODEL JAAIVD010000003;XM_032900397 XP_032756288 carbonyl reductase [NADPH] 3 protein-coding 625899356 Cpm carboxypeptidase M PARTICIPATES IN kallikrein-kinin cascade pathway; ASSOCIATED WITH autistic disorder (ortholog); endometriosis (ortholog); silicosis (ortholog) 1 195729271 195786249 + 22301074;30032202 116909296 MODEL JAAIVD010000025;XM_032912838 XP_032768729 protein-coding 625899369 LOC116888891 protein Jade-3 X 3066551 3082048 - 30032202 116888891 MODEL JAAIVD010000014;XM_032890153 XP_032746044 protein-coding 625899376 Eeig2 EEIG family member 2 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 3 49262089 49309365 + 116896351 MODEL JAAIVD010000012;XM_032897453;XM_032897454 XP_032753344;XP_032753345 Fam102b family with sequence similarity 102 member B;protein FAM102B protein-coding 625899394 LOC116910575 olfactory receptor 1D2 9 93074214 93075149 + 22301074 116910575 MODEL JAAIVD010000002;XM_032914499 XP_032770390 protein-coding 625899397 LOC116886744 small nucleolar RNA SNORA17 17 13207175 13207289 + 116886744 MODEL JAAIVD010000011 pseudo 625899398 Naga alpha-N-acetylgalactosaminidase ENCODES a protein that exhibits alpha-N-acetylgalactosaminidase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN carbohydrate catabolic process (ortholog); glycolipid catabolic process (ortholog); ASSOCIATED WITH angiokeratoma (ortholog); COVID-19 (ortholog); fetal akinesia deformation sequence syndrome 1 (ortholog) 1 252058891 252067621 - 30032202 116914271 MODEL JAAIVD010000025;XM_032918496 XP_032774387 protein-coding 625899412 LOC116914249 uncharacterized LOC116914249 13 31558937 31572890 + 116914249 MODEL JAAIVD010000008;XR_004389739 ncrna 625899419 LOC116893002 cytochrome P450 2C55 2 222179179 222187145 + 22301074;30032202 116893002 MODEL JAAIVD010000001;XM_032894963 XP_032750854 protein-coding 625899428 Rsad2 radical S-adenosyl methionine domain containing 2 ENCODES a protein that exhibits 4 iron, 4 sulfur cluster binding (ortholog); INVOLVED IN CD4-positive, alpha-beta T cell activation (ortholog); CD4-positive, alpha-beta T cell differentiation (ortholog); defense response to virus (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); congestive heart failure (ortholog); COVID-19 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); lipid droplet (ortholog) 7 39973632 39984432 - 22301074;30032202 116904923 MODEL JAAIVD010000026;XM_032907552 XP_032763443 radical S-adenosyl methionine domain-containing protein 2 protein-coding 625899438 Clk3 CDC like kinase 3 ENCODES a protein that exhibits identical protein binding (ortholog); kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN peptidyl-tyrosine phosphorylation (ortholog); protein autophosphorylation (ortholog); protein phosphorylation (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 8 51635916 51651093 - 22301074 116908075 MODEL JAAIVD010000027;XM_032911350;XM_032911351 XP_032767241;XP_032767242 dual specificity protein kinase CLK3 protein-coding 625899458 Tmem229a transmembrane protein 229A 6 114395646 114398875 + 116904032 MODEL JAAIVD010000024;XM_032906867 XP_032762758 protein-coding 625899463 LOC116914199 U7 small nuclear RNA 12 24672575 24672636 - 116914199 MODEL JAAIVD010000007;XR_004389734 snrna 625899466 Nav1 neuron navigator 1 INVOLVED IN microtubule bundle formation (ortholog); neuron migration (ortholog); FOUND IN axon initial segment (ortholog); microtubule cytoskeleton (ortholog) 10 107415 279172 + 22301074;30032202 116911208 MODEL JAAIVD010000005;XM_032915084 XP_032770975 protein-coding 625899502 LOC116883719 keratin, type II cuticular Hb6 1 261601011 261607198 - 22301074;30032202 116883719 MODEL JAAIVD010000025;XM_032884947;XM_032884956 XP_032740838;XP_032740847 protein-coding 625899517 Fbxl20 F-box and leucine rich repeat protein 20 INVOLVED IN behavioral fear response (ortholog); regulation of protein catabolic process at presynapse, modulating synaptic transmission (ortholog); regulation of synaptic vesicle exocytosis (ortholog); FOUND IN glutamatergic synapse (ortholog); Schaffer collateral - CA1 synapse (ortholog); synapse (ortholog) 9 56243992 56301569 + 22301074;30032202 116908552 MODEL JAAIVD010000002;XM_032911756 XP_032767647 F-box/LRR-repeat protein 20 protein-coding 625899536 LOC116907698 interstitial collagenase A 8 3714967 3736194 + 22301074;30032202 116907698 MODEL JAAIVD010000027;XM_032910810 XP_032766701 protein-coding 625899550 Ppp1r14a protein phosphatase 1 regulatory inhibitor subunit 14A INVOLVED IN cellular response to xenobiotic stimulus (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); Mesothelioma (ortholog); stomach cancer (ortholog); FOUND IN nucleoplasm (ortholog) 2 166658321 166662724 - 22301074;30032202 116892354 MODEL JAAIVD010000001;XM_032894007 XP_032749898 protein phosphatase 1 regulatory subunit 14A protein-coding 625899558 LOC116902365 seminal vesicle secretory protein 4 5 153704669 153706592 + 30032202 116902365 MODEL JAAIVD010000023;XM_032904860 XP_032760751 protein-coding 625899565 LOC116911717 uncharacterized LOC116911717 10 34504133 34507778 + 116911717 MODEL JAAIVD010000005;XR_004389335 ncrna 625899569 LOC116912920 U6 spliceosomal RNA 11 45652364 45652470 + 116912920 MODEL JAAIVD010000006;XR_004389493 snrna 625899572 LOC116888473 uncharacterized LOC116888473 X 109810800 109817804 + 116888473 MODEL JAAIVD010000014;XR_004386315 ncrna 625899577 Sin3a SIN3 transcription regulator family member A ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); cellular response to dopamine (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN DNA modification pathway; Hedgehog signaling pathway; ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN chromatin (ortholog); histone deacetylase complex (ortholog); kinetochore (ortholog) 8 50986820 51041444 + 30032202 116906982 MODEL JAAIVD010000027;XM_032909903;XM_032909904;XM_032909906;XM_032909907;XM_032909908;XM_032909909 XP_032765794;XP_032765795;XP_032765797;XP_032765798;XP_032765799;XP_032765800 paired amphipathic helix protein Sin3a protein-coding 625899616 LOC116888620 prohibitin-like X 46260410 46262631 + 116888620 MODEL JAAIVD010000014 pseudo 625899617 LOC116896134 uncharacterized LOC116896134 3 5000885 5069058 + 116896134 MODEL JAAIVD010000012;XR_004387311;XR_004387312;XR_004387313;XR_004387314;XR_004387315 ncrna 625899630 Tmem238 transmembrane protein 238 2 177361607 177367226 - 116892668 MODEL JAAIVD010000001;XM_032894495 XP_032750386 protein-coding 625899636 LOC116904036 60S ribosomal protein L7a-like 1 150113241 150114053 + 116904036 MODEL JAAIVD010000025 pseudo 625899637 Wdr18 WD repeat domain 18 FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 1 154908411 154916110 - 22301074;30032202 116905475 MODEL JAAIVD010000025;XM_032908450;XM_032908460;XM_032908471 XP_032764341;XP_032764351;XP_032764362 WD repeat-containing protein 18 protein-coding 625899657 Dnph1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 ENCODES a protein that exhibits 5-hydroxymethyl-dUMP N-hydrolase activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN allantoin metabolic process (ortholog); deoxyribonucleoside monophosphate catabolic process (ortholog); dGMP catabolic process (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 4 83361143 83364212 - 22301074;30032202 116898046 MODEL JAAIVD010000003;XM_032899439 XP_032755330 protein-coding 625899665 Psmd5 proteasome 26S subunit, non-ATPase 5 INVOLVED IN proteasome regulatory particle assembly (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome regulatory particle, base subcomplex (ortholog) 5 782419 800271 + 22301074;30032202 116901107 MODEL JAAIVD010000023;XM_032902672 XP_032758563 26S proteasome non-ATPase regulatory subunit 5 protein-coding 625899679 LOC116911888 U6 spliceosomal RNA 10 56737728 56737818 + 116911888 MODEL JAAIVD010000005 pseudo 625899680 Clip4 CAP-Gly domain containing linker protein family member 4 7 21362170 21432437 - 30032202 116905953 MODEL JAAIVD010000026;XM_032908954 XP_032764845 CAP-Gly domain-containing linker protein 4 protein-coding 625899700 LOC116908067 olfactory receptor 7E24-like 8 16081531 16082463 - 22301074;30032202 116908067 MODEL JAAIVD010000027;XM_032911339 XP_032767230 protein-coding 625899704 Otulinl OTU deubiquitinase with linear linkage specificity like ENCODES a protein that exhibits ubiquitin binding (ortholog); ubiquitin-like protein peptidase activity (ortholog); INVOLVED IN protein deubiquitination (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of endoplasmic reticulum membrane (ortholog); nuclear envelope (ortholog) 3 153063346 153088625 + 30032202 116897058 MODEL JAAIVD010000012;XM_032898679;XM_032898680;XM_032898681 XP_032754570;XP_032754571;XP_032754572 inactive ubiquitin thioesterase OTULINL protein-coding 625899723 LOC116899958 leucine-rich repeat protein SHOC-2-like 5 40247773 40249460 - 116899958 MODEL JAAIVD010000023 pseudo 625899724 LOC116895232 60S ribosomal protein L7a-like 3 20573921 20574384 + 116895232 MODEL JAAIVD010000012 pseudo 625899725 Eeig1 estrogen-induced osteoclastogenesis regulator 1 INVOLVED IN positive regulation of osteoclast differentiation (ortholog); FOUND IN cytoplasm (ortholog); membrane raft (ortholog); nucleus (ortholog) 5 3074103 3105400 - 116901143 MODEL JAAIVD010000023;XM_032902752 XP_032758643 Fam102a family with sequence similarity 102 member A;protein FAM102A protein-coding 625899740 Pdhb pyruvate dehydrogenase E1 subunit beta ENCODES a protein that exhibits pyruvate dehydrogenase (acetyl-transferring) activity (ortholog); INVOLVED IN pyruvate decarboxylation to acetyl-CoA (ortholog); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; Leigh disease pathway; ASSOCIATED WITH epilepsy (ortholog); genetic disease (ortholog); pyruvate decarboxylase deficiency (ortholog); FOUND IN mitochondrion (ortholog); pyruvate dehydrogenase complex (ortholog) 12 78585523 78591411 - 30032202 116914035 MODEL JAAIVD010000007;XM_032918316 XP_032774207 pyruvate dehydrogenase E1 component subunit beta, mitochondrial protein-coding 625899754 LOC116887413 RT1 class I histocompatibility antigen, AA alpha chain-like 18 8657801 8661523 - 30032202 116887413 MODEL JAAIVD010000013;XM_032889024;XM_032889025;XM_032889026;XM_032889027;XM_032889028;XM_032889029 XP_032744915;XP_032744916;XP_032744917;XP_032744918;XP_032744919;XP_032744920 class I histocompatibility antigen, Non-RT1.A alpha-1 chain-like protein-coding 625899778 Ppm1k protein phosphatase, Mg2+/Mn2+ dependent 1K ENCODES a protein that exhibits manganese ion binding (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN branched-chain amino acid catabolic process (ortholog); regulation of mitochondrial membrane permeability involved in apoptotic process (ortholog); ASSOCIATED WITH congestive heart failure (ortholog); maple syrup urine disease (ortholog); mild variant of maple syrup urine disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 6 83366662 83391129 - 22301074;30032202 116903731 MODEL JAAIVD010000024;XM_032906413;XM_032906414;XM_032906415;XM_032906416 XP_032762304;XP_032762305;XP_032762306;XP_032762307 protein phosphatase 1K, mitochondrial protein-coding 625899794 Banf2 BANF family member 2 ENCODES a protein that exhibits identical protein binding (ortholog) 5 123715575 123728447 + 22301074 116900659 MODEL JAAIVD010000023;XM_032902364 XP_032758255 barrier-to-autointegration factor-like protein protein-coding 625899801 Pgm2l1 phosphoglucomutase 2 like 1 ENCODES a protein that exhibits glucose-1,6-bisphosphate synthase activity (ortholog); phosphoglucomutase activity (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; glycogen storage disease type III pathway; glycogen storage disease type IV pathway; ASSOCIATED WITH genetic disease (ortholog); Neurodevelopmental Disorder with Hypotonia, Dysmorphic Facies, and Skin Abnormalities (ortholog) 2 98522699 98566107 + 22301074;30032202 116891736 MODEL JAAIVD010000001;XM_032893039 XP_032748930 glucose 1,6-bisphosphate synthase protein-coding 625899819 Ankrd17 ankyrin repeat domain 17 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN blood vessel maturation (ortholog); defense response to bacterium (ortholog); innate immune response (ortholog); ASSOCIATED WITH CHOPRA-AMIEL-GORDON SYNDROME (ortholog); genetic disease (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 11 3668678 3803049 - 22301074;30032202 116912204 MODEL JAAIVD010000006;XM_032916145;XM_032916146;XM_032916147;XM_032916148;XM_032916149;XM_032916150;XM_032916151;XM_032916152 XP_032772036;XP_032772037;XP_032772038;XP_032772039;XP_032772040;XP_032772041;XP_032772042;XP_032772043 ankyrin repeat domain-containing protein 17 protein-coding 625899870 Ankrd33b ankyrin repeat domain 33B 3 149457560 149530429 + 22301074 116897050 MODEL JAAIVD010000012;XM_032898674 XP_032754565 ankyrin repeat domain-containing protein 33B protein-coding 625899878 LOC116908119 uncharacterized LOC116908119 1 169957225 169958827 + 116908119 MODEL JAAIVD010000025;XR_004388875 ncrna 625899882 LOC116897719 WD repeat-containing protein 5B-like 4 21015893 21021317 + 116897719 MODEL JAAIVD010000003 pseudo 625899883 Mrpl58 mitochondrial ribosomal protein L58 ENCODES a protein that exhibits peptidyl-tRNA hydrolase activity (ortholog); translation release factor activity, codon nonspecific (ortholog); INVOLVED IN mitochondrial translational termination (ortholog); rescue of stalled mitochondrial ribosome (ortholog); FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 9 68690130 68696286 - 22301074;30032202 116909714 MODEL JAAIVD010000002;XM_032913387 XP_032769278 peptidyl-tRNA hydrolase ICT1, mitochondrial protein-coding 625899893 LOC116912349 28S ribosomal protein S17, mitochondrial-like 11 78308624 78309024 + 116912349 MODEL JAAIVD010000006 pseudo 625899894 LOC116910645 U1 spliceosomal RNA 9 83343868 83344031 - 116910645 MODEL JAAIVD010000002;XR_004389181 snrna 625899897 LOC116893450 nitric oxide synthase-interacting protein-like 2 177826845 177827659 + 116893450 MODEL JAAIVD010000001 pseudo 625899898 Mpped2 metallophosphoesterase domain containing 2 ENCODES a protein that exhibits AMP binding (ortholog); GMP binding (ortholog); manganese ion binding (ortholog); ASSOCIATED WITH migraine with aura (ortholog) 5 84607056 84784665 + 22301074 116901718 MODEL JAAIVD010000023;XM_032903849;XM_032903850;XM_032903851;XM_032903852;XM_032903853 XP_032759740;XP_032759741;XP_032759742;XP_032759743;XP_032759744 metallophosphoesterase MPPED2 protein-coding 625899921 LOC116888806 sperm acrosome-associated protein 5 X 14033971 14037087 - 22301074;30032202 116888806 MODEL JAAIVD010000014;XM_032890085 XP_032745976 protein-coding 625899927 LOC116912230 peptidyl-prolyl cis-trans isomerase A-like 1 168396000 168396671 + 116912230 MODEL JAAIVD010000025 pseudo 625899928 LOC116889975 uncharacterized LOC116889975 1 166926413 166927515 + 116889975 MODEL JAAIVD010000025;XR_004386517 ncrna 625899933 LOC116908411 small nucleolar RNA SNORA17 8 46306779 46306903 + 116908411 MODEL JAAIVD010000027 pseudo 625899934 LOC116895050 small nucleolar RNA SNORA17 2 37911829 37911959 - 116895050 MODEL JAAIVD010000001;XR_004387233 snorna 625899937 Higd1c HIG1 hypoxia inducible domain family member 1C INVOLVED IN response to hypoxia (ortholog) 1 262710974 262730566 - 30032202 116884061 MODEL JAAIVD010000025;XM_032885311 XP_032741202 HIG1 domain family member 1C protein-coding 625899945 LOC116895188 40S ribosomal protein S27-like 3 184279427 184284687 - 116895188 MODEL JAAIVD010000012 pseudo 625899946 LOC116899910 U6atac minor spliceosomal RNA 4 142197473 142197604 - 116899910 MODEL JAAIVD010000003;XR_004387882 snrna 625899949 LOC116892953 band 4.1-like protein 3 2 211546910 211548468 + 116892953 MODEL JAAIVD010000001;XM_032894905 XP_032750796 protein-coding 625899954 LOC116888437 claudin-34-like X 47383209 47391712 + 30032202 116888437 MODEL JAAIVD010000014;XM_032889710 XP_032745601 protein-coding 625899960 Oc90 otoconin 90 ENCODES a protein that exhibits calcium ion binding (ortholog); structural molecule activity (ortholog); INVOLVED IN otolith mineralization (ortholog); ASSOCIATED WITH vestibular disease (ortholog); FOUND IN extracellular matrix (ortholog) 1 240038289 240072154 - 22301074;30032202 116912185 MODEL JAAIVD010000025;XM_032916123 XP_032772014 otoconin-90 protein-coding 625899978 LOC116893709 olfactory receptor 5B3-like 2 13360785 13361717 - 22301074;30032202 116893709 MODEL JAAIVD010000001;XM_032895426 XP_032751317 protein-coding 625899981 LOC116886780 U4 spliceosomal RNA 17 48294611 48294776 - 116886780 MODEL JAAIVD010000011 pseudo 625899982 LOC116912961 U1 spliceosomal RNA 11 42980190 42980359 + 116912961 MODEL JAAIVD010000006;XR_004389528 snrna 625899985 LOC116899734 5S ribosomal RNA 4 28899500 28899618 + 116899734 MODEL JAAIVD010000003;XR_004387753 rrna 625899988 Prss16 serine protease 16 FOUND IN endosome (ortholog); lysosome (ortholog) 14 41679990 41687571 + 22301074;30032202 116883455 MODEL JAAIVD010000009;XM_032884603 XP_032740494 thymus-specific serine protease protein-coding 625900004 Ttc34 tetratricopeptide repeat domain 34 1 5853730 5868384 - 22301074 116892083 MODEL JAAIVD010000025;XM_032893561 XP_032749452 tetratricopeptide repeat protein 34 protein-coding 625900015 LOC116893558 ETS domain-containing protein Elk-4-like 2 214019841 214021148 + 116893558 MODEL JAAIVD010000001 pseudo 625900016 Pars2 prolyl-tRNA synthetase 2, mitochondrial ASSOCIATED WITH developmental and epileptic encephalopathy 75 (ortholog); genetic disease (ortholog); myoepithelioma (ortholog); FOUND IN mitochondrion (ortholog) 1 48150739 48155773 - 22301074;30032202 116899387 MODEL JAAIVD010000025;XM_032901111;XM_032901119;XM_032901127 XP_032757002;XP_032757010;XP_032757018 probable proline--tRNA ligase, mitochondrial protein-coding 625900030 Tmem181 transmembrane protein 181 ENCODES a protein that exhibits toxic substance binding (ortholog) 2 192503788 192557571 - 30032202 116892850 MODEL JAAIVD010000001;XM_032894741;XM_032894742;XM_032894743;XM_032894744 XP_032750632;XP_032750633;XP_032750634;XP_032750635 protein-coding 625900062 LOC116890083 eukaryotic translation initiation factor 4B-like 1 221908554 221910462 + 116890083 MODEL JAAIVD010000025 pseudo 625900063 LOC116903623 peptidyl-prolyl cis-trans isomerase D-like 6 108128750 108135071 + 116903623 MODEL JAAIVD010000024 pseudo 625900064 Dio2 iodothyronine deiodinase 2 ENCODES a protein that exhibits thyroxine 5'-deiodinase activity (ortholog); thyroxine 5-deiodinase activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); lipid metabolic process (ortholog); positive regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); basal cell carcinoma (ortholog); endometriosis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 7 103947382 103958011 - 22301074;30032202 116905330 MODEL JAAIVD010000026;XM_032908226 XP_032764117 type II iodothyronine deiodinase protein-coding 625900071 LOC116886645 cuticle collagen 2C-like 17 20704798 20705478 - 116886645 MODEL JAAIVD010000011;XM_032888145 XP_032744036 protein-coding 625900074 Kif2c kinesin family member 2C ENCODES a protein that exhibits microtubule plus-end binding (ortholog); INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); establishment or maintenance of microtubule cytoskeleton polarity (ortholog); metaphase chromosome alignment (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); contact dermatitis (ortholog); COVID-19 (ortholog); FOUND IN chromosome, centromeric region (ortholog); glutamatergic synapse (ortholog); kinetochore (ortholog) 1 40784204 40808820 - 22301074;30032202 116898654 MODEL JAAIVD010000025;XM_032899889;XM_032899896 XP_032755780;XP_032755787 kinesin-like protein KIF2C protein-coding 625900100 Ntf3 neurotrophin 3 ENCODES a protein that exhibits chemoattractant activity (ortholog); growth factor activity (ortholog); nerve growth factor binding (ortholog); INVOLVED IN axon guidance (ortholog); brain development (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); Alcohol-Related Disorders (ortholog); Alzheimer's disease (ortholog); FOUND IN cytoplasmic vesicle (ortholog) 6 21733928 21802823 + 30032202 116903244 MODEL JAAIVD010000024;XM_032905622;XM_032905624;XM_032905625 XP_032761513;XP_032761515;XP_032761516 neurotrophin-3 protein-coding 625900112 LOC116904794 U2 spliceosomal RNA 6 129619597 129619665 + 116904794 MODEL JAAIVD010000024 pseudo 625900113 LOC116903019 40S ribosomal protein SA-like 6 154349806 154351125 + 116903019 MODEL JAAIVD010000024 pseudo 625900114 LOC116902517 U7 small nuclear RNA 5 136555115 136555178 + 116902517 MODEL JAAIVD010000023;XR_004388126 snrna 625900117 LOC116889126 ATP synthase subunit O, mitochondrial-like 1 121752701 121753319 + 116889126 MODEL JAAIVD010000025 pseudo 625900118 Insyn2b inhibitory synaptic factor family member 2B 9 7133858 7243845 + 30032202 116909252 MODEL JAAIVD010000002;XM_032912773;XM_032912774 XP_032768664;XP_032768665 protein INSYN2B protein-coding 625900129 LOC116886603 aldo-keto reductase family 1 member B1-like 17 10959659 10960715 + 116886603 MODEL JAAIVD010000011 pseudo 625900130 LOC116913811 uncharacterized LOC116913811 1 250413420 250419904 - 116913811 MODEL JAAIVD010000025;XR_004389643 ncrna 625900134 LOC116909239 60S ribosomal protein L38-like 9 11018868 11019954 + 116909239 MODEL JAAIVD010000002 pseudo 625900135 LOC116885648 zinc finger protein 11 16 24327719 24333034 + 116885648 MODEL JAAIVD010000004;XM_032886955 XP_032742846 protein-coding 625900141 LOC116904590 taste receptor type 2 member 102-like 6 16549816 16550766 + 22301074;30032202 116904590 MODEL JAAIVD010000024;XM_032907386 XP_032763277 protein-coding 625900144 Marchf1 membrane associated ring-CH-type finger 1 ENCODES a protein that exhibits MHC protein binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN antigen processing and presentation of peptide antigen via MHC class II (ortholog); immune response (ortholog); protein polyubiquitination (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN early endosome membrane (ortholog); endoplasmic reticulum membrane (ortholog); endosome (ortholog) 13 22787840 23291759 - 22301074;30032202 116914844 MODEL JAAIVD010000008;XM_032919298 XP_032775189 E3 ubiquitin-protein ligase MARCH1 protein-coding 625900155 Dynlt4 dynein light chain Tctex-type 4 ENCODES a protein that exhibits protein phosphatase 1 binding (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN acrosomal vesicle (ortholog); axoneme (ortholog); cytoplasm (ortholog) 1 40753529 40754282 + 30032202 116898630 MODEL JAAIVD010000025;XM_032899852 XP_032755743 Tctex1d4 Tctex1 domain containing 4;tctex1 domain-containing protein 4 protein-coding 625900160 LOC116908905 ADP/ATP translocase 2-like 9 5996574 5997551 - 116908905 MODEL JAAIVD010000002;XR_004389038 pseudo 625900163 Gprasp2 G protein-coupled receptor associated sorting protein 2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); G protein-coupled receptor binding (ortholog); INVOLVED IN hematopoietic stem cell homeostasis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); intellectual disability (ortholog); X-linked deafness 7 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) X 87657929 87661121 - 116888614 MODEL JAAIVD010000014;XM_032889913 XP_032745804 G-protein coupled receptor-associated sorting protein 2 protein-coding 625900168 LOC116885050 small nucleolar RNA SNORA17 15 42002444 42002574 - 116885050 MODEL JAAIVD010000010;XR_004385936 snorna 625900171 LOC116889925 ribosome biogenesis regulatory protein homolog 1 42307639 42308802 - 116889925 MODEL JAAIVD010000025 pseudo 625900172 Fam3d FAM3 metabolism regulating signaling molecule D INVOLVED IN aorta development (ortholog); negative regulation of insulin secretion (ortholog); neutrophil homeostasis (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN extracellular region (ortholog) 12 78758553 78792930 - 30032202 116913390 MODEL JAAIVD010000007;XM_032917567 XP_032773458 protein FAM3D protein-coding 625900186 Fibp FGF1 intracellular binding protein ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); INVOLVED IN platelet aggregation (ortholog); ASSOCIATED WITH coloboma (ortholog); genetic disease (ortholog); THAUVIN-ROBINET-FAIVRE SYNDROME (ortholog); FOUND IN membrane (ortholog); nuclear speck (ortholog); nucleus (ortholog) 2 2209164 2213527 - 30032202 116890716 MODEL JAAIVD010000001;XM_032891163;XM_032891164 XP_032747054;XP_032747055 acidic fibroblast growth factor intracellular-binding protein protein-coding 625900202 LOC116895767 F-box only protein 6-like 3 46696539 46697366 + 116895767 MODEL JAAIVD010000012 pseudo 625900203 Tp53tg5 TP53 target 5 FOUND IN chromosome (ortholog); nucleolus (ortholog) 5 153479697 153493389 + 116899987 MODEL JAAIVD010000023;XM_032901799 XP_032757690 TP53-target gene 5 protein protein-coding 625900209 LOC116889327 40S ribosomal protein S10-like X 53400232 53400729 + 116889327 MODEL JAAIVD010000014 pseudo 625900210 Asphd2 aspartate beta-hydroxylase domain containing 2 16 41588285 41595197 + 22301074 116885578 MODEL JAAIVD010000004;XM_032886873 XP_032742764 aspartate beta-hydroxylase domain-containing protein 2 protein-coding 625900217 LOC116888190 RRP12-like protein X 121066119 121073823 + 116888190 MODEL JAAIVD010000014 pseudo 625900218 LOC116900286 olfactory receptor 1052 5 63551927 63552865 + 22301074;30032202 116900286 MODEL JAAIVD010000023;XM_032902040 XP_032757931 protein-coding 625900221 LOC116893553 adenosylhomocysteinase-like 2 211124933 211126163 + 116893553 MODEL JAAIVD010000001 pseudo 625900222 Hhla2 HHLA2 member of B7 family INVOLVED IN positive regulation of activated T cell proliferation (ortholog); positive regulation of cytokine production (ortholog); T cell costimulation (ortholog) 4 33977219 33983687 - 116898312 MODEL JAAIVD010000003;XM_032899655 XP_032755546 HERV-H LTR-associating 2;HERV-H LTR-associating protein 2 protein-coding 625900228 LOC116902420 uncharacterized LOC116902420 5 157819781 157822940 + 116902420 MODEL JAAIVD010000023;XR_004388069 ncrna 625900232 LOC116900438 olfactory receptor 4C15-like 5 70777343 70778278 - 22301074 116900438 MODEL JAAIVD010000023;XM_032902179 XP_032758070 protein-coding 625900235 LOC116889392 rhox homeobox family member 2-like X 103538350 103541997 - 22301074 116889392 MODEL JAAIVD010000014;XM_032890493 XP_032746384 protein-coding 625900243 LOC116888981 uncharacterized LOC116888981 X 10178742 10215100 - 116888981 MODEL JAAIVD010000014;XR_004386357 ncrna 625900248 LOC116914908 39S ribosomal protein L37, mitochondrial-like 13 7448890 7450425 - 116914908 MODEL JAAIVD010000008 pseudo 625900249 LOC116895047 small nucleolar RNA SNORA17 2 12022688 12022818 - 116895047 MODEL JAAIVD010000001;XR_004387230 snorna 625900252 Ercc6l ERCC excision repair 6 like, spindle assembly checkpoint helicase ENCODES a protein that exhibits DNA translocase activity (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); lung adenocarcinoma (ortholog); lung squamous cell carcinoma (ortholog) X 59926483 59942421 - 22301074;30032202 116888752 MODEL JAAIVD010000014;XM_032890045 XP_032745936 DNA excision repair protein ERCC-6-like protein-coding 625900258 Shroom1 shroom family member 1 ENCODES a protein that exhibits actin filament binding (ortholog); myosin II binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH COVID-19 (ortholog) 9 35951289 35961650 + 22301074;30032202 116909981 MODEL JAAIVD010000002;XM_032913764 XP_032769655 protein Shroom1 protein-coding 625900270 LOC116892825 centromere/kinetochore protein zw10 homolog 1 63772187 63783763 - 116892825 MODEL JAAIVD010000025 pseudo 625900271 LOC116914179 U6 spliceosomal RNA 12 75370810 75370913 - 116914179 MODEL JAAIVD010000007;XR_004389722 snrna 625900274 LOC116905263 ferritin light chain 1-like 7 98343921 98344696 + 116905263 MODEL JAAIVD010000026;XR_004388507 pseudo 625900277 LOC116900135 olfactory receptor 1N1-like 5 14568755 14569690 - 22301074 116900135 MODEL JAAIVD010000023;XM_032901909 XP_032757800 protein-coding 625900280 Ptgfr prostaglandin F receptor ENCODES a protein that exhibits prostaglandin F receptor activity (ortholog); INVOLVED IN cellular response to prostaglandin D stimulus (ortholog); maternal process involved in female pregnancy (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Airway Obstruction (ortholog); endometriosis (ortholog); myoepithelioma (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); plasma membrane (ortholog) 3 84996974 85028211 - 22301074;30032202 116895467 MODEL JAAIVD010000012;XM_032896730;XM_032896731 XP_032752621;XP_032752622 prostaglandin F2-alpha receptor protein-coding 625900292 LOC116894212 olfactory receptor 507 2 106517184 106518128 + 22301074;30032202 116894212 MODEL JAAIVD010000001;XM_032895925 XP_032751816 protein-coding 625900295 Cd226 CD226 molecule ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); identical protein binding (ortholog); integrin binding (ortholog); INVOLVED IN natural killer cell mediated cytotoxicity (ortholog); positive regulation of Fc receptor mediated stimulatory signaling pathway (ortholog); positive regulation of immunoglobulin mediated immune response (ortholog); ASSOCIATED WITH Chronic Hepatitis C (ortholog); Colorectal Neoplasms (ortholog); endometriosis (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) 15 43493000 43567253 - 30032202 116884812 MODEL JAAIVD010000010;XM_032886043 XP_032741934 CD226 antigen protein-coding 625900305 LOC116905640 voltage-dependent anion-selective channel protein 1-like 7 27114731 27115621 - 116905640 MODEL JAAIVD010000026 pseudo 625900306 Mid2 midline 2 ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN host-mediated suppression of symbiont invasion (ortholog); innate immune response (ortholog); negative regulation of viral transcription (ortholog); ASSOCIATED WITH non-syndromic X-linked intellectual disability 101 (ortholog); FOUND IN microtubule (ortholog) X 93082103 93179939 + 22301074 116888506 MODEL JAAIVD010000014;XM_032889799 XP_032745690 probable E3 ubiquitin-protein ligase MID2 protein-coding 625900320 Clrn1 clarin 1 INVOLVED IN actin filament organization (ortholog); auditory receptor cell development (ortholog); auditory receptor cell stereocilium organization (ortholog); PARTICIPATES IN retinitis pigmentosa pathway; ASSOCIATED WITH branchiootorenal syndrome (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN basal part of cell (ortholog); lamellipodium (ortholog); microtubule cytoskeleton (ortholog) 3 196400333 196423538 + 30032202 116896044 MODEL JAAIVD010000012;XM_032897044 XP_032752935 clarin-1 protein-coding 625900326 B3gnt3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 ENCODES a protein that exhibits N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN poly-N-acetyllactosamine biosynthetic process (ortholog) 13 13265886 13274430 + 22301074;30032202 116914268 MODEL JAAIVD010000008;XM_032918490 XP_032774381 N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3 protein-coding 625900334 Slc27a2 solute carrier family 27 member 2 ENCODES a protein that exhibits enzyme binding (ortholog); fatty acid transmembrane transporter activity (ortholog); long-chain fatty acid transmembrane transporter activity (ortholog); INVOLVED IN bile acid biosynthetic process (ortholog); fatty acid alpha-oxidation (ortholog); fatty acid beta-oxidation (ortholog); PARTICIPATES IN phytanic acid degradation pathway; Refsum disease pathway; ASSOCIATED WITH colorectal cancer (ortholog); Fibrosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog); endoplasmic reticulum membrane (ortholog) 5 105388744 105426312 + 30032202 116901916 MODEL JAAIVD010000023;XM_032904133 XP_032760024 very long-chain acyl-CoA synthetase protein-coding 625900348 LOC116895030 small nucleolar RNA SNORA17 2 88882304 88882434 + 116895030 MODEL JAAIVD010000001;XR_004387216 snorna 625900351 Ppp2r2a protein phosphatase 2 regulatory subunit Balpha ENCODES a protein that exhibits enzyme-substrate adaptor activity (ortholog); phosphoprotein phosphatase activity (ortholog); protein phosphatase 2A binding (ortholog); INVOLVED IN protein dephosphorylation (ortholog); regulation of chromosome segregation (ortholog); response to morphine (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase-Akt signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Chromosomal Instability (ortholog); Emphysema (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN glutamatergic synapse (ortholog); protein phosphatase type 2A complex (ortholog); protein serine/threonine phosphatase complex (ortholog) 12 57422136 57480787 + 22301074;30032202 116913858 MODEL JAAIVD010000007;XM_032918156;XM_032918157;XM_032918158 XP_032774047;XP_032774048;XP_032774049 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform protein-coding 625900373 LOC116900311 olfactory receptor 10AG1-like 5 64124929 64125891 - 22301074 116900311 MODEL JAAIVD010000023;XM_032902067 XP_032757958 protein-coding 625900377 Rps19bp1 ribosomal protein S19 binding protein 1 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN ribosomal small subunit biogenesis (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); small-subunit processome (ortholog) 1 250029292 250032627 - 30032202 116913784 MODEL JAAIVD010000025;XM_032918094 XP_032773985 active regulator of SIRT1 protein-coding 625900385 Adat1 adenosine deaminase tRNA specific 1 ENCODES a protein that exhibits RNA binding (ortholog); tRNA-specific adenosine deaminase activity (ortholog); INVOLVED IN tRNA processing (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN nucleoplasm (ortholog) 17 31643686 31677778 - 22301074 116886438 MODEL JAAIVD010000011;XM_032887924;XM_032887925;XM_032887926;XM_032887927;XM_032887928 XP_032743815;XP_032743816;XP_032743817;XP_032743818;XP_032743819 tRNA-specific adenosine deaminase 1 protein-coding 625900412 LOC116883909 BRCA1-associated RING domain protein 1-like 14 440483 460466 - 116883909 MODEL JAAIVD010000009 pseudo 625900413 Foxb2 forkhead box B2 2 16969773 16971269 - 30032202 116893736 MODEL JAAIVD010000001;XM_032895448 XP_032751339 forkhead box protein B2 protein-coding 625900418 Thbs1 thrombospondin 1 ENCODES a protein that exhibits collagen V binding (ortholog); endopeptidase inhibitor activity (ortholog); extracellular matrix binding (ortholog); INVOLVED IN behavioral response to pain (ortholog); blood coagulation, fibrin clot formation (ortholog); blood vessel morphogenesis (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Neoplasms (ortholog); Cerebral Hemorrhage (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); external side of plasma membrane (ortholog) 5 96245440 96258259 + 22301074;30032202 116900955 MODEL JAAIVD010000023;XM_032902592 XP_032758483 thrombospondin-1 protein-coding 625900442 LOC116887740 U2 spliceosomal RNA 18 39533522 39533654 - 116887740 MODEL JAAIVD010000013 pseudo 625900443 Yes1 YES proto-oncogene 1, Src family tyrosine kinase ENCODES a protein that exhibits enzyme binding (ortholog); epidermal growth factor receptor binding (ortholog); phosphotyrosine residue binding (ortholog); INVOLVED IN cellular response to platelet-derived growth factor stimulus (ortholog); cellular response to retinoic acid (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; glypican signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); double outlet right ventricle (ortholog); Myocardial Reperfusion Injury (ortholog); FOUND IN actin filament (ortholog); cell junction (ortholog); cytoplasm (ortholog) 4 182483414 182556612 - 22301074;30032202 116899731 MODEL JAAIVD010000003;XM_032901770;XM_032901771;XM_032901772;XM_032901773 XP_032757661;XP_032757662;XP_032757663;XP_032757664 tyrosine-protein kinase Yes protein-coding 625900468 Slco2a1 solute carrier organic anion transporter family member 2A1 ENCODES a protein that exhibits prostaglandin transmembrane transporter activity (ortholog); INVOLVED IN prostaglandin transport (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); basal cell carcinoma (ortholog); Colorectal Neoplasms (ortholog); FOUND IN basal plasma membrane (ortholog) 8 94353187 94387744 + 22301074;30032202 116907394 MODEL JAAIVD010000027;XM_032910347 XP_032766238 protein-coding 625900484 Parp8 poly(ADP-ribose) polymerase family member 8 ENCODES a protein that exhibits NAD+-protein mono-ADP-ribosyltransferase activity (ortholog); INVOLVED IN protein auto-ADP-ribosylation (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation 3 180406620 180572381 - 22301074;30032202 116897176 MODEL JAAIVD010000012;XM_032898861 XP_032754752 protein mono-ADP-ribosyltransferase PARP8 protein-coding 625900515 Rpl32 ribosomal protein L32 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cytoplasmic translation (ortholog); liver regeneration (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosolic large ribosomal subunit (ortholog) 6 30903932 30907554 + 22301074;30032202 116903378 MODEL JAAIVD010000024;XM_032905866 XP_032761757 60S ribosomal protein L32 protein-coding 625900523 Inca1 inhibitor of CDK, cyclin A1 interacting protein 1 ENCODES a protein that exhibits cyclin binding (ortholog); cyclin-dependent protein serine/threonine kinase inhibitor activity (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); negative regulation of cyclin-dependent protein serine/threonine kinase activity (ortholog); positive regulation of apoptotic signaling pathway (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 9 50299194 50310512 - 30032202 116909533 MODEL JAAIVD010000002;XM_032913147 XP_032769038 protein INCA1 protein-coding 625900534 Ctxnd1 cortexin domain containing 1 ASSOCIATED WITH megacolon (ortholog) 2 115795433 115840917 - 116891876 MODEL JAAIVD010000001;XM_032893281;XM_032893282 XP_032749172;XP_032749173 cortexin domain-containing 1 protein-coding 625900544 Mrps6 mitochondrial ribosomal protein S6 ASSOCIATED WITH coronary artery disease (ortholog); FOUND IN mitochondrial small ribosomal subunit (ortholog); mitochondrion (ortholog) 4 52502274 52558168 - 22301074;30032202 116898350 MODEL JAAIVD010000003;XM_032899669 XP_032755560 28S ribosomal protein S6, mitochondrial protein-coding 625900551 LOC116884413 ferritin heavy chain-like 15 71953147 71953815 - 116884413 MODEL JAAIVD010000010 pseudo 625900552 Tmem102 transmembrane protein 102 INVOLVED IN positive regulation of cell adhesion (ortholog); positive regulation of T cell chemotaxis (ortholog); positive regulation of T cell migration (ortholog); FOUND IN cell surface (ortholog); protein-containing complex (ortholog) 9 49409594 49411690 - 116908974 MODEL JAAIVD010000002;XM_032912437 XP_032768328 protein-coding 625900558 Snai2 snail family transcriptional repressor 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cartilage morphogenesis (ortholog); cell migration (ortholog); cell migration involved in endocardial cushion formation (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); calcinosis (ortholog); Esophageal Neoplasms (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 4 149252 152559 + 30032202 116897744 MODEL JAAIVD010000003;XM_032899182 XP_032755073 zinc finger protein SNAI2 protein-coding 625900564 Chrna4 cholinergic receptor nicotinic alpha 4 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); action potential (ortholog); B cell activation (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cholinergic synapse (ortholog); dendrite (ortholog) 5 158126017 158146658 - 22301074;30032202 116902427 MODEL JAAIVD010000023;XM_032904957;XM_032904958 XP_032760848;XP_032760849 neuronal acetylcholine receptor subunit alpha-4 protein-coding 625900580 Xrcc4 X-ray repair cross complementing 4 ENCODES a protein that exhibits 3' overhang single-stranded DNA endonuclease activity (ortholog); DNA binding (ortholog); enzyme activator activity (ortholog); INVOLVED IN base-excision repair (ortholog); cellular response to lithium ion (ortholog); central nervous system development (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH Chromosome Aberrations (ortholog); genetic disease (ortholog); isolated growth hormone deficiency type IA (ortholog); FOUND IN chromosome, telomeric region (ortholog); condensed chromosome (ortholog); cytoplasm (ortholog) 3 206225342 206440257 + 22301074;30032202 116897310 MODEL JAAIVD010000012;XM_032899059 XP_032754950 DNA repair protein XRCC4 protein-coding 625900592 Mamstr MEF2 activating motif and SAP domain containing transcriptional regulator INVOLVED IN positive regulation of myotube differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleus (ortholog) 2 153875247 153879252 - 30032202 116892135 MODEL JAAIVD010000001;XM_032893624;XM_032893625 XP_032749515;XP_032749516 MEF2-activating motif and SAP domain-containing transcriptional regulator protein-coding 625900607 LOC116893702 aflatoxin B1 aldehyde reductase member 3 1 18841195 18848800 - 22301074 116893702 MODEL JAAIVD010000025;XM_032895422 XP_032751313 protein-coding 625900618 LOC116887626 olfactory receptor 11A1-like 18 10370975 10371535 - 116887626 MODEL JAAIVD010000013 pseudo 625900619 Bclaf1 BCL2 associated transcription factor 1 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); DNA damage response (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Epidermolysis Bullosa Simplex 5D with Nail Dystrophy (ortholog); Fraser syndrome 3 (ortholog); lung small cell carcinoma (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 216242335 216271299 - 30032202 116892974 MODEL JAAIVD010000001;XM_032894933 XP_032750824 bcl-2-associated transcription factor 1 protein-coding 625900637 LOC116910262 leucine-rich repeat-containing protein 37A-like 9 32416286 32442985 - 116910262 MODEL JAAIVD010000002;XM_032914146 XP_032770037 protein-coding 625900651 LOC116890346 U6 spliceosomal RNA 1 34601536 34601639 - 116890346 MODEL JAAIVD010000025;XR_004386568 snrna 625900654 LOC116912389 uncharacterized LOC116912389 11 91233059 91241728 - 116912389 MODEL JAAIVD010000006;XR_004389454 ncrna 625900659 Atp6v1e2 ATPase H+ transporting V1 subunit E2 ENCODES a protein that exhibits proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN proton transmembrane transport (ortholog); FOUND IN acrosomal vesicle (ortholog) 7 6039488 6043492 + 22301074;30032202 116905536 MODEL JAAIVD010000026;XM_032908574;XM_032908575 XP_032764465;XP_032764466 V-type proton ATPase subunit E 2 protein-coding 625900670 Spcs2 signal peptidase complex subunit 2 INVOLVED IN protein processing (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); signal peptidase complex (ortholog) 2 98119495 98137164 - 22301074;30032202 116891730 MODEL JAAIVD010000001;XM_032893027 XP_032748918 protein-coding 625900679 Limk1 LIM domain kinase 1 ENCODES a protein that exhibits heat shock protein binding (ortholog); protein serine/threonine kinase activity (ortholog); ubiquitin ligase inhibitor activity (ortholog); INVOLVED IN positive regulation of actin filament bundle assembly (ortholog); positive regulation of axon extension (ortholog); positive regulation of stress fiber assembly (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH High Myopia (ortholog); myoclonic-atonic epilepsy (ortholog); Williams-Beuren syndrome (ortholog); FOUND IN axonal growth cone (ortholog); cytoplasm (ortholog); cytosol (ortholog) 16 19369419 19403164 + 22301074;30032202 116885523 MODEL JAAIVD010000004;XM_032886820 XP_032742711 protein-coding 625900699 LOC116892511 LYR motif-containing protein 1-like 1 10242006 10242621 - 116892511 MODEL JAAIVD010000025 pseudo 625900700 LOC116893674 olfactory receptor 5A1-like 2 12226996 12227949 - 22301074;30032202 116893674 MODEL JAAIVD010000001;XM_032895390 XP_032751281 protein-coding 625900703 LOC116913306 uncharacterized LOC116913306 12 69496794 69509277 + 116913306 MODEL JAAIVD010000007;XR_004389603 ncrna 625900707 LOC116892782 vomeronasal type-2 receptor 116-like 2 185283030 185305098 - 22301074;30032202 116892782 MODEL JAAIVD010000001;XM_032894656 XP_032750547 protein-coding 625900715 LOC116893230 60S ribosomal protein L7-like 2 117133101 117144324 + 116893230 MODEL JAAIVD010000001 pseudo 625900716 LOC116902802 putative vomeronasal receptor-like protein 4 6 83672096 83673034 - 116902802 MODEL JAAIVD010000024 pseudo 625900717 LOC116900597 gamma-aminobutyric acid receptor-associated protein-like 5 98025213 98025568 + 116900597 MODEL JAAIVD010000023 pseudo 625900718 LOC116895998 60S ribosomal protein L7a-like 3 167730127 167736366 - 116895998 MODEL JAAIVD010000012 pseudo 625900719 Vac14 VAC14 component of PIKFYVE complex ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate metabolic process (ortholog); regulation of postsynaptic neurotransmitter receptor internalization (ortholog); PARTICIPATES IN inositol metabolic pathway; phosphoinositide metabolic pathway; ASSOCIATED WITH genetic disease (ortholog); myoepithelioma (ortholog); neurodegenerative disease (ortholog); FOUND IN endosome membrane (ortholog); presynaptic endosome (ortholog) 17 30326767 30428704 + 30032202 116886108 MODEL JAAIVD010000011;XM_032887440 XP_032743331 protein VAC14 homolog protein-coding 625900742 Pum3 pumilio RNA binding family member 3 FOUND IN chromosome (ortholog); endoplasmic reticulum (ortholog); nucleolus (ortholog) 2 27466722 27501408 - 30032202 116891061 MODEL JAAIVD010000001;XM_032891759;XM_032891760 XP_032747650;XP_032747651 pumilio homolog 3 protein-coding 625900769 LOC116894098 olfactory receptor 688-like 2 103426827 103427795 + 22301074 116894098 MODEL JAAIVD010000001;XM_032895818 XP_032751709 protein-coding 625900773 LOC116900128 olfactory receptor 50-like 5 14494025 14494966 + 22301074;30032202 116900128 MODEL JAAIVD010000023;XM_032901902 XP_032757793 protein-coding 625900776 LOC116913296 olfactory receptor 5AU1 12 71854844 71855779 + 22301074;30032202 116913296 MODEL JAAIVD010000007;XM_032917424 XP_032773315 protein-coding 625900779 Dcxr dicarbonyl and L-xylulose reductase ENCODES a protein that exhibits identical protein binding (ortholog); L-xylulose reductase (NADPH) activity (ortholog); oxidoreductase activity, acting on CH-OH group of donors (ortholog); INVOLVED IN D-glucuronate catabolic process to D-xylulose 5-phosphate (ortholog); glucose metabolic process (ortholog); NADP+ metabolic process (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); obesity (ortholog); pentosuria (ortholog); FOUND IN brush border (ortholog); cytoplasmic microtubule (ortholog); cytosol (ortholog) 9 63291288 63293170 + 30032202 116909843 MODEL JAAIVD010000002;XM_032913569 XP_032769460 L-xylulose reductase protein-coding 625900791 LOC116908704 serine protease 28-like 9 2577629 2579936 + 22301074;30032202 116908704 MODEL JAAIVD010000002;XM_032912037 XP_032767928 protein-coding 625900798 Rpl4 ribosomal protein L4 ENCODES a protein that exhibits 5S rRNA binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN brainstem development (ortholog); cell differentiation (ortholog); cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); High Myopia (ortholog); Sepsis (ortholog); FOUND IN A band (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 58478448 58483412 + 22301074;30032202 116906770 MODEL JAAIVD010000027;XM_032909612 XP_032765503 60S ribosomal protein L4 protein-coding 625900812 Dimt1 DIM1 rRNA methyltransferase and ribosome maturation factor ENCODES a protein that exhibits 18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase activity (ortholog); rRNA (adenine-N6,N6-)-dimethyltransferase activity (ortholog); INVOLVED IN positive regulation of rRNA processing (ortholog); ribosomal small subunit biogenesis (ortholog); rRNA methylation (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); small-subunit processome (ortholog) 3 190651655 190676763 - 22301074;30032202 116897214 MODEL JAAIVD010000012;XM_032898927;XM_032898928;XM_032898930;XM_032898931 XP_032754818;XP_032754819;XP_032754821;XP_032754822 DIMT1 rRNA methyltransferase and ribosome maturation factor;probable dimethyladenosine transferase protein-coding 625900840 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92704245 92704316 + 116904840 MODEL JAAIVD010000024 trna 625900841 LOC116889067 prohibitin-like X 37467941 37468705 - 116889067 MODEL JAAIVD010000014 pseudo 625900842 LOC116904302 40S ribosomal protein S17-like 6 46653507 46653961 + 22301074;30032202 116904302 MODEL JAAIVD010000024;XM_032907221 XP_032763112 protein-coding 625900846 LOC116907941 olfactory receptor 7G2-like 8 75725929 75726858 - 22301074;30032202 116907941 MODEL JAAIVD010000027;XM_032911162 XP_032767053 protein-coding 625900849 Fstl4 follistatin like 4 ENCODES a protein that exhibits brain-derived neurotrophic factor binding (ortholog); INVOLVED IN negative regulation of brain-derived neurotrophic factor receptor signaling pathway (ortholog); negative regulation of collateral sprouting (ortholog); negative regulation of dendritic spine development (ortholog); FOUND IN secretory granule (ortholog) 9 35242029 35675156 + 22301074;30032202 116908671 MODEL JAAIVD010000002;XM_032911962 XP_032767853 follistatin-related protein 4 protein-coding 625900869 LOC116911348 epoxide hydrolase 1 10 59310095 59339282 - 30032202 116911348 MODEL JAAIVD010000005;XM_032915267;XM_032915268 XP_032771158;XP_032771159 protein-coding 625900885 Myl11 myosin light chain 11 ENCODES a protein that exhibits structural constituent of muscle (ortholog); INVOLVED IN immune response (ortholog); muscle contraction (ortholog); skeletal muscle tissue development (ortholog); ASSOCIATED WITH distal arthrogryposis (ortholog); distal arthrogryposis type 1C (ortholog) 2 74675414 74680731 - 22301074;30032202 116891484 MODEL JAAIVD010000001;XM_032892588 XP_032748479 Mylpf myosin light chain, phosphorylatable, fast skeletal muscle;myosin regulatory light chain 2, skeletal muscle isoform protein-coding 625900896 LOC116909229 60S ribosomal protein L31-like 9 9274201 9274554 + 22301074;30032202 116909229 MODEL JAAIVD010000002;XM_032912732 XP_032768623 protein-coding 625900899 Slc39a3 solute carrier family 39 member 3 ENCODES a protein that exhibits zinc ion transmembrane transporter activity (ortholog); INVOLVED IN cell morphogenesis (ortholog); embryonic cranial skeleton morphogenesis (ortholog); in utero embryonic development (ortholog); FOUND IN apical plasma membrane (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog); plasma membrane (ortholog) 1 153852472 153858736 + 30032202 116904621 MODEL JAAIVD010000025;XM_032907415 XP_032763306 zinc transporter ZIP3 protein-coding 625900906 LOC116913613 olfactory receptor 146-like 12 46580 47515 - 22301074;30032202 116913613 MODEL JAAIVD010000007;XM_032917864 XP_032773755 protein-coding 625900909 Npr3 natriuretic peptide receptor 3 ENCODES a protein that exhibits chloride ion binding (ortholog); G protein-coupled peptide receptor activity (ortholog); hormone binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); angiogenesis (ortholog); blood vessel remodeling (ortholog); PARTICIPATES IN C-type natriuretic peptide signaling pathway; natriuretic peptide signaling pathway; ASSOCIATED WITH bone disease (ortholog); BOUDIN-MORTIER SYNDROME (ortholog); diabetic retinopathy (ortholog); FOUND IN protein-containing complex (ortholog) 3 169162879 169223328 + 22301074;30032202 116897121 MODEL JAAIVD010000012;XM_032898772;XM_032898773 XP_032754663;XP_032754664 atrial natriuretic peptide receptor 3 protein-coding 625900923 P4htm prolyl 4-hydroxylase, transmembrane ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); INVOLVED IN regulation of erythrocyte differentiation (ortholog); ASSOCIATED WITH genetic disease (ortholog); HYPOTONIA, HYPERVENTILATION, IMPAIRED INTELLECTUAL DEVELOPMENT, DYSAUTONOMIA, EPILEPSY, AND EYE ABNORMALITIES (ortholog); intellectual disability (ortholog) 8 99908552 99926266 - 22301074;30032202 116907601 MODEL JAAIVD010000027;XM_032910651;XR_004388828 XP_032766542 transmembrane prolyl 4-hydroxylase protein-coding 625900939 Tmtc1 transmembrane O-mannosyltransferase targeting cadherins 1 ENCODES a protein that exhibits dolichyl-phosphate-mannose-protein mannosyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation via mannose (ortholog); ASSOCIATED WITH COVID-19 (ortholog) 6 5873166 5975697 - 22301074;30032202 116903105 MODEL JAAIVD010000024;XM_032905430;XM_032905431 XP_032761321;XP_032761322 protein O-mannosyl-transferase TMTC1 protein-coding 625900958 Trappc11 trafficking protein particle complex subunit 11 INVOLVED IN constitutive secretory pathway (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); Golgi organization (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 23 (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2S (ortholog); FOUND IN Golgi apparatus (ortholog); TRAPP complex (ortholog) 13 40505580 40551087 + 116914386 MODEL JAAIVD010000008;XM_032918601 XP_032774492 trafficking protein particle complex 11 protein-coding 625900992 Mrpl19 mitochondrial ribosomal protein L19 ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog); nucleus (ortholog) 6 64151296 64155567 + 22301074;30032202 116903652 MODEL JAAIVD010000024;XM_032906308 XP_032762199 39S ribosomal protein L19, mitochondrial protein-coding 625901001 LOC116912149 PRAME family member 18-like 11 48663874 48665190 - 116912149 MODEL JAAIVD010000006 pseudo 625901002 Akr1b1 aldo-keto reductase family 1 member B ENCODES a protein that exhibits aldose reductase (NADPH) activity (ortholog); cis-1,2-dihydro-1,2-dihydroxynaphthalene dehydrogenase activity (ortholog); glyceraldehyde oxidoreductase activity (ortholog); INVOLVED IN cellular hyperosmotic salinity response (ortholog); cellular response to hydrogen peroxide (ortholog); cellular response to methylglyoxal (ortholog); PARTICIPATES IN D-glycericacidemia pathway; dopa responsive dystonia pathway; familial lipoprotein lipase deficiency pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Albuminuria (ortholog); allergic disease (ortholog); FOUND IN cytosol (ortholog); extracellular region (ortholog); mast cell granule (ortholog) 6 105361740 105375618 + 30032202 116903980 MODEL JAAIVD010000024;XM_032906788 XP_032762679 aldo-keto reductase family 1 member B1 protein-coding 625901016 LOC116902318 uncharacterized LOC116902318 5 150910659 150913338 - 116902318 MODEL JAAIVD010000023;XR_004388062 ncrna 625901021 Wdr70 WD repeat domain 70 ENCODES a protein that exhibits enzyme binding (ortholog) 3 172410722 172637248 + 22301074;30032202 116897143 MODEL JAAIVD010000012;XM_032898806;XM_032898807 XP_032754697;XP_032754698 WD repeat-containing protein 70 protein-coding 625901048 LOC116902056 glucose-6-phosphate 1-dehydrogenase-like 5 125453727 125456009 + 22301074;30032202 116902056 MODEL JAAIVD010000023;XM_032904346 XP_032760237 protein-coding 625901053 Caap1 caspase activity and apoptosis inhibitor 1 INVOLVED IN negative regulation of apoptotic process (ortholog) 2 160262698 160268320 + 116893357 MODEL JAAIVD010000001;XM_032895162 XP_032751053 protein-coding 625901058 LOC116904016 potassium voltage-gated channel subfamily B member 2 1 150132658 150136035 + 22301074;30032202 116904016 MODEL JAAIVD010000025;XM_032906841 XP_032762732 protein-coding 625901063 Ppp1r3a protein phosphatase 1 regulatory subunit 3A PARTICIPATES IN glycogen biosynthetic pathway; glycogen degradation pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; ASSOCIATED WITH diabetes mellitus (ortholog); hypoglycemia (ortholog); Insulin Resistance (ortholog) 3 184358971 184395577 + 30032202 116897190 MODEL JAAIVD010000012;XM_032898884;XM_032898885 XP_032754775;XP_032754776 protein-coding 625901071 LOC116912256 UDP-glucuronosyltransferase 2A3 11 1458432 1471041 + 22301074 116912256 MODEL JAAIVD010000006;XM_032916241 XP_032772132 protein-coding 625901079 LOC116885649 40S ribosomal protein S25-like 16 24314965 24315323 - 116885649 MODEL JAAIVD010000004 pseudo 625901080 Mc2r melanocortin 2 receptor ENCODES a protein that exhibits corticotropin receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); placenta development (ortholog); positive regulation of glucocorticoid biosynthetic process (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphas family; melanocortin system pathway; ASSOCIATED WITH Acute-Phase Reaction (ortholog); Disorders of Environmental Origin (ortholog); genetic disease (ortholog); FOUND IN plasma membrane (ortholog) 15 62859297 62869995 + 22301074 116884872 MODEL JAAIVD010000010;XM_032886112;XM_032886114;XM_032886115 XP_032742003;XP_032742005;XP_032742006 adrenocorticotropic hormone receptor protein-coding 625901095 Gnai2 G protein subunit alpha i2 INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); angiogenesis (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphai protein family; angiotensin II signaling pathway via AT2 receptor; dopamine signaling pathway via D2 family of receptors; ASSOCIATED WITH Adrenal Cortex Neoplasms (ortholog); Animal Mammary Neoplasms (ortholog); atrioventricular block (ortholog); FOUND IN cell body (ortholog); centrosome (ortholog); cytoplasm (ortholog) 8 98933255 98953806 - 22301074;30032202 116907538 MODEL JAAIVD010000027;XM_032910556;XM_032910557 XP_032766447;XP_032766448 guanine nucleotide-binding protein G(i) subunit alpha-2 protein-coding 625901111 LOC116900448 olfactory receptor 4A5-like 5 70998215 70999132 + 22301074 116900448 MODEL JAAIVD010000023;XM_032902189 XP_032758080 protein-coding 625901114 LOC116907373 olfactory receptor 145-like 8 31685599 31686543 + 22301074;30032202 116907373 MODEL JAAIVD010000027;XM_032910326 XP_032766217 protein-coding 625901117 Sct secretin ENCODES a protein that exhibits digestive hormone activity (ortholog); G protein-coupled receptor binding (ortholog); hormone activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); dentate gyrus development (ortholog); diet induced thermogenesis (ortholog); ASSOCIATED WITH autistic disorder (ortholog); choledochal cyst (ortholog); polycystic ovary syndrome (ortholog); FOUND IN extracellular region (ortholog) 2 8199662 8200531 + 22301074;30032202 116893621 MODEL JAAIVD010000001;XM_032895335 XP_032751226 protein-coding 625901125 LOC116905210 uncharacterized LOC116905210 7 94198919 94199464 + 116905210 MODEL JAAIVD010000026;XR_004388499 ncrna 625901129 Nus1 NUS1 dehydrodolichyl diphosphate synthase subunit ENCODES a protein that exhibits ditrans,polycis-polyprenyl diphosphate synthase [(2E,6E)-farnesyl diphosphate specific] activity (ortholog); prenyltransferase activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); dolichyl diphosphate biosynthetic process (ortholog); dolichyl monophosphate biosynthetic process (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); autosomal dominant intellectual developmental disorder 55 (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN dehydrodolichyl diphosphate synthase complex (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) 18 29527656 29551794 - 30032202 116887226 MODEL JAAIVD010000013;XM_032888788 XP_032744679 dehydrodolichyl diphosphate synthase complex subunit NUS1 protein-coding 625901138 LOC116899046 uncharacterized LOC116899046 4 64412824 64417701 - 116899046 MODEL JAAIVD010000003;XR_004387684 ncrna 625901142 LOC116893496 zinc finger SWIM domain-containing protein 5-like 2 183135090 183139330 - 116893496 MODEL JAAIVD010000001 pseudo 625901143 Tbc1d19 TBC1 domain family member 19 INVOLVED IN regulation of cilium assembly (ortholog) 11 52236245 52354724 - 116912100 MODEL JAAIVD010000006;XM_032915995 XP_032771886 protein-coding 625901168 LOC116905654 phosphoglycerate mutase 1-like 7 40376450 40377160 - 116905654 MODEL JAAIVD010000026 pseudo 625901169 Zdhhc8 zDHHC palmitoyltransferase 8 ENCODES a protein that exhibits palmitoyltransferase activity (ortholog); INVOLVED IN locomotory behavior (ortholog); peptidyl-L-cysteine S-palmitoylation (ortholog); positive regulation of cholesterol efflux (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN glutamatergic synapse (ortholog); Golgi apparatus (ortholog); mitochondrion (ortholog) 4 3489515 3504160 - 22301074;30032202 116898663 MODEL JAAIVD010000003;XM_032899898;XM_032899899 XP_032755789;XP_032755790 probable palmitoyltransferase ZDHHC8;zinc finger DHHC-type palmitoyltransferase 8 protein-coding 625901187 LOC116905623 partner of Y14 and mago-like 7 19155825 19168001 + 116905623 MODEL JAAIVD010000026 pseudo 625901188 LOC116904801 U4 spliceosomal RNA 6 27726933 27727061 - 116904801 MODEL JAAIVD010000024 pseudo 625901189 Fam222b family with sequence similarity 222 member B FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) 9 92282606 92347186 - 116908634 MODEL JAAIVD010000002;XM_032911889 XP_032767780 protein FAM222B protein-coding 625901196 LOC116890224 histone deacetylase 1-like 1 268889701 268891046 - 116890224 MODEL JAAIVD010000025 pseudo 625901197 Dnajb6 DnaJ heat shock protein family (Hsp40) member B6 ENCODES a protein that exhibits ATPase activator activity (ortholog); DNA binding (ortholog); heat shock protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); chorio-allantoic fusion (ortholog); chorion development (ortholog); ASSOCIATED WITH autosomal dominant limb-girdle muscular dystrophy (ortholog); autosomal dominant limb-girdle muscular dystrophy type 1 (ortholog); Ehlers-Danlos syndrome classic type 1 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 6 158692658 158757583 - 30032202 116904246 MODEL JAAIVD010000024;XM_032907201;XM_032907202;XM_032907203;XM_032907204 XP_032763092;XP_032763093;XP_032763094;XP_032763095 dnaJ homolog subfamily B member 6 protein-coding 625901217 LOC116908368 small nucleolar RNA SNORA43 8 100722539 100722676 - 116908368 MODEL JAAIVD010000027;XR_004388917 snorna 625901220 Magt1 magnesium transporter 1 INVOLVED IN cognition (ortholog); magnesium ion transport (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation Icc (ortholog); Developmental Disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); oligosaccharyltransferase complex (ortholog) X 65532194 65564961 - 30032202 116887959 MODEL JAAIVD010000014;XM_032889404 XP_032745295 magnesium transporter protein 1 protein-coding 625901232 LOC116897293 PRELI domain containing protein 3B 3 203124528 203125455 + 30032202 116897293 MODEL JAAIVD010000012;XM_032899025 XP_032754916 protein-coding 625901237 LOC116894056 olfactory receptor 51F1 2 102772443 102773402 - 22301074 116894056 MODEL JAAIVD010000001;XM_032895778 XP_032751669 protein-coding 625901240 LOC116884370 replication protein A 70 kDa DNA-binding subunit-like 15 44085658 44087484 - 116884370 MODEL JAAIVD010000010 pseudo 625901241 LOC116894315 stress-induced-phosphoprotein 1-like 2 148425010 148426634 - 116894315 MODEL JAAIVD010000001 pseudo 625901242 Fbxw11 F-box and WD repeat domain containing 11 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN negative regulation of non-canonical NF-kappaB signal transduction (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of circadian rhythm (ortholog); PARTICIPATES IN Hedgehog signaling pathway; mTOR signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH NEURODEVELOPMENTAL, JAW, EYE, AND DIGITAL SYNDROME (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 5488288 5584910 + 22301074 116910207 MODEL JAAIVD010000002;XM_032914072;XM_032914073;XM_032914074;XM_032914075;XM_032914076;XM_032914077;XM_032914078;XM_032914080;XM_032914081;XM_032914082 XP_032769963;XP_032769964;XP_032769965;XP_032769966;XP_032769967;XP_032769968;XP_032769969;XP_032769971;XP_032769972;XP_032769973 F-box/WD repeat-containing protein 11 protein-coding 625901282 Gtpbp10 GTP binding protein 10 ENCODES a protein that exhibits mitochondrial large ribosomal subunit binding (ortholog); rRNA binding (ortholog); INVOLVED IN mitochondrial large ribosomal subunit assembly (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 6 137796003 137813993 - 22301074;30032202 116904131 MODEL JAAIVD010000024;XM_032907017 XP_032762908 GTP-binding protein 10 protein-coding 625901296 LOC116908143 nucleolar protein 16-like 8 26997128 26997657 + 116908143 MODEL JAAIVD010000027 pseudo 625901297 Dctn5 dynactin subunit 5 INVOLVED IN aorta development (ortholog); coronary vasculature development (ortholog); dynein-driven meiotic oscillatory nuclear movement (ortholog); PARTICIPATES IN mitochondria transport pathway; FOUND IN centrosome (ortholog) 2 79679678 79697012 - 116891557 MODEL JAAIVD010000001;XM_032892730 XP_032748621 protein-coding 625901307 Fam114a2 family with sequence similarity 114 member A2 9 40712836 40746639 + 116908632 MODEL JAAIVD010000002;XM_032911882;XM_032911884;XM_032911885;XM_032911886 XP_032767773;XP_032767775;XP_032767776;XP_032767777 protein FAM114A2 protein-coding 625901334 Sun1 Sad1 and UNC84 domain containing 1 ENCODES a protein that exhibits cytoskeleton-nuclear membrane anchor activity (ortholog); identical protein binding (ortholog); lamin binding (ortholog); INVOLVED IN centrosome localization (ortholog); homologous chromosome pairing at meiosis (ortholog); meiotic attachment of telomere to nuclear envelope (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Emery-Dreifuss muscular dystrophy (ortholog); progeria (ortholog); FOUND IN acrosomal membrane (ortholog); chromosome, telomeric region (ortholog); cytoplasm (ortholog) 16 13950912 13995560 - 30032202 116885960 MODEL JAAIVD010000004;XM_032887278;XM_032887279;XM_032887280;XM_032887281;XM_032887282;XM_032887283;XM_032887284;XM_032887285;XM_032887286;XM_032887287;XM_032887288;XM_032887289;XM_032887290;XM_032887292;XM_032887293;XM_032887294;XM_032887295;XM_032887296;XM_032887297;XM_032887298 XP_032743169;XP_032743170;XP_032743171;XP_032743172;XP_032743173;XP_032743174;XP_032743175;XP_032743176;XP_032743177;XP_032743178;XP_032743179;XP_032743180;XP_032743181;XP_032743183;XP_032743184;XP_032743185;XP_032743186;XP_032743187;XP_032743188;XP_032743189 SUN domain-containing protein 1 protein-coding 625901403 LOC116892726 olfactory receptor 2A1/2A42-like 2 179657837 179658802 - 22301074 116892726 MODEL JAAIVD010000001;XM_032894600 XP_032750491 protein-coding 625901406 Foxq1 forkhead box Q1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN hair follicle morphogenesis (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog) 14 50573651 50576627 + 30032202 116883862 MODEL AF153193;JAAIVD010000009;XM_032885129 AAF73234;XP_032741020 Hfh1 forkhead box protein Q1;winged helix/forkhead transcription factor HFH1 protein-coding 625901411 Ing2 inhibitor of growth family member 2 ENCODES a protein that exhibits DNA binding (ortholog); histone H3K4me3 reader activity (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN flagellated sperm motility (ortholog); male germ-line stem cell asymmetric division (ortholog); male meiosis I (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN CCAAT-binding factor complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 13 40351317 40358215 + 30032202 116914635 MODEL JAAIVD010000008;XM_032919025;XM_032919026 XP_032774916;XP_032774917 inhibitor of growth protein 2 protein-coding 625901422 LOC116914053 uncharacterized LOC116914053 12 40041048 40048546 + 116914053 MODEL JAAIVD010000007;XR_004389662 ncrna 625901428 LOC116908792 NHP2-like protein 1 9 72643885 72645046 - 22301074;30032202 116908792 MODEL JAAIVD010000002;XM_032912185 XP_032768076 protein-coding 625901433 LOC116913587 granzyme G-like 12 68884362 68887303 + 22301074;30032202 116913587 MODEL JAAIVD010000007;XM_032917816 XP_032773707 protein-coding 625901441 LOC116895004 small nucleolar RNA SNORA33 2 209856727 209856855 - 116895004 MODEL JAAIVD010000001;XR_004387192 snorna 625901444 LOC116910769 U6 spliceosomal RNA 9 62135886 62135992 + 116910769 MODEL JAAIVD010000002;XR_004389277 snrna 625901447 LOC116883958 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase-like 14 22838678 22839224 + 116883958 MODEL JAAIVD010000009 pseudo 625901448 Knl1 kinetochore scaffold 1 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); chromosome segregation (ortholog); DNA damage response (ortholog); ASSOCIATED WITH autosomal recessive primary microcephaly (ortholog); COVID-19 (ortholog); Familial Prostate Cancer (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); kinetochore (ortholog) 5 97219719 97281532 + 22301074;30032202 116901794 MODEL JAAIVD010000023;XM_032903948;XM_032903949 XP_032759839;XP_032759840 protein-coding 625901481 LOC116897386 U6 spliceosomal RNA 3 107710222 107710328 + 116897386 MODEL JAAIVD010000012;XR_004387430 snrna 625901484 LOC116885031 small nucleolar RNA SNORA33 15 33573794 33573922 + 116885031 MODEL JAAIVD010000010;XR_004385918 snorna 625901487 LOC116883630 serpin B9-like 14 52065990 52080554 + 22301074;30032202 116883630 MODEL JAAIVD010000009;XM_032884820;XM_032884821 XP_032740711;XP_032740712 protein-coding 625901502 Gad1 glutamate decarboxylase 1 ENCODES a protein that exhibits glutamate binding (ortholog); glutamate decarboxylase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to hyperoxia (ortholog); cellular response to hypoxia (ortholog); cellular response to serotonin (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; beta-alanine metabolic pathway; Canavan disease pathway; ASSOCIATED WITH alcohol dependence (ortholog); amphetamine abuse (ortholog); anxiety disorder (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cell cortex (ortholog) 5 47884041 47924975 + 22301074;30032202 116901496 MODEL JAAIVD010000023;XM_032903463 XP_032759354 protein-coding 625901523 LOC116893378 potassium channel subfamily K member 6-like 2 166764644 166770934 + 116893378 MODEL JAAIVD010000001 pseudo 625901524 LOC116887737 small nucleolar RNA SNORA17 18 35306158 35306272 + 116887737 MODEL JAAIVD010000013 pseudo 625901525 Mrps25 mitochondrial ribosomal protein S25 ASSOCIATED WITH combined oxidative phosphorylation deficiency 50 (ortholog); FOUND IN mitochondrion (ortholog) 6 54781966 54793804 + 30032202 116903490 MODEL JAAIVD010000024;XM_032906068 XP_032761959 28S ribosomal protein S25, mitochondrial protein-coding 625901533 Fstl1 follistatin like 1 INVOLVED IN endothelial cell differentiation (ortholog); endothelial cell migration (ortholog); hematopoietic stem cell homeostasis (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); aortic valve insufficiency (ortholog); Experimental Liver Cirrhosis (ortholog) 4 22746832 22800097 + 22301074;30032202 116898835 MODEL JAAIVD010000003;XM_032900188 XP_032756079 follistatin-related protein 1 protein-coding 625901548 LOC116900168 L-lactate dehydrogenase A chain-like 5 29775683 29776848 - 116900168 MODEL JAAIVD010000023 pseudo 625901549 LOC116902485 U6 spliceosomal RNA 5 51961054 51961155 + 116902485 MODEL JAAIVD010000023;XR_004388101 snrna 625901552 Rttn rotatin INVOLVED IN determination of left/right symmetry (ortholog); ASSOCIATED WITH genetic disease (ortholog); microcephaly (ortholog); Microcephaly, Short Stature, and Polymicrogyria with or without Seizures (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 15 43626883 43794257 - 30032202 116884449 MODEL JAAIVD010000010;XM_032885543;XM_032885544;XM_032885545;XM_032885546;XM_032885547;XM_032885548 XP_032741434;XP_032741435;XP_032741436;XP_032741437;XP_032741438;XP_032741439 protein-coding 625901615 Naa38 N-alpha-acetyltransferase 38, NatC auxiliary subunit INVOLVED IN negative regulation of apoptotic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cytoplasm (ortholog); NatC complex (ortholog); nucleoplasm (ortholog) 9 49007753 49008919 + 22301074 116910606 MODEL JAAIVD010000002;XM_032914548;XM_032914549;XR_004389164 XP_032770439;XP_032770440 protein-coding 625901629 Kiss1r KISS1 receptor ENCODES a protein that exhibits G protein-coupled peptide receptor activity (ortholog); G protein-coupled receptor activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN arachidonate secretion (ortholog); calcium-mediated signaling (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH breast cancer (ortholog); central precocious puberty 1 (ortholog); cryptorchidism (ortholog); FOUND IN cell surface (ortholog); cilium (ortholog); membrane (ortholog) 1 154953102 154956826 - 22301074;30032202 116889863 MODEL JAAIVD010000025;XM_032890689 XP_032746580 kiSS-1 receptor protein-coding 625901638 Iqsec3 IQ motif and Sec7 domain ArfGEF 3 INVOLVED IN activation of GTPase activity (ortholog); postsynapse organization (ortholog); regulation of small GTPase mediated signal transduction (ortholog); FOUND IN cytosol (ortholog); GABA-ergic synapse (ortholog); glycinergic synapse (ortholog) 6 25265976 25361399 + 22301074;30032202 116903316 MODEL JAAIVD010000024;XM_032905750 XP_032761641 IQ motif and SEC7 domain-containing protein 3 protein-coding 625901656 Tm4sf1 transmembrane 4 L six family member 1 INVOLVED IN blastocyst formation (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog) 7 78090163 78099218 + 22301074;30032202 116905094 MODEL JAAIVD010000026;XM_032907817 XP_032763708 transmembrane 4 L6 family member 1 protein-coding 625901665 Cenpi centromere protein I INVOLVED IN follicle-stimulating hormone signaling pathway (ortholog); ASSOCIATED WITH primary ovarian insufficiency (ortholog); FOUND IN kinetochore (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) X 86646592 86691529 + 22301074 116888045 MODEL JAAIVD010000014;XM_032889441 XP_032745332 protein-coding 625901683 LOC116910530 keratin-associated protein 3-2 9 54382260 54382559 - 22301074;30032202 116910530 MODEL JAAIVD010000002;XM_032914434 XP_032770325 protein-coding 625901686 LOC116908416 U1 spliceosomal RNA 8 78724282 78724447 + 116908416 MODEL JAAIVD010000027;XR_004388955 snrna 625901689 Fth1 ferritin heavy chain 1 ENCODES a protein that exhibits ferrous iron binding (ortholog); ferroxidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN iron ion transport (ortholog); negative regulation of cellular process (ortholog); negative regulation of ferroptosis (ortholog); PARTICIPATES IN iron storage pathway; ASSOCIATED WITH Chronic Cerebral Hypoperfusion (ortholog); congestive heart failure (ortholog); contact dermatitis (ortholog); FOUND IN autolysosome (ortholog); cytosol (ortholog); membrane (ortholog) 2 151225905 151228305 - 22301074;30032202 116893302 MODEL JAAIVD010000001;XM_032895130 XP_032751021 ferritin heavy chain protein-coding 625901696 Trim45 tripartite motif containing 45 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN bone development (ortholog); negative regulation of inflammatory response (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 3 57137234 57146087 - 22301074;30032202 116896465 MODEL JAAIVD010000012;XM_032897627 XP_032753518 tripartite motif-containing protein 45 protein-coding 625901706 LOC116893829 60S ribosomal protein L7a 2 55668385 55669265 - 22301074 116893829 MODEL JAAIVD010000001;XM_032895547 XP_032751438 protein-coding 625901711 Endod1 endonuclease domain containing 1 INVOLVED IN double-strand break repair (ortholog) 8 10181324 10211467 - 22301074 116906856 MODEL JAAIVD010000027;XM_032909754 XP_032765645 endonuclease domain-containing 1 protein protein-coding 625901717 LOC116894885 U6 spliceosomal RNA 2 228380929 228381032 - 116894885 MODEL JAAIVD010000001;XR_004387094 snrna 625901720 Lrrc53 leucine rich repeat containing 53 3 6606149 6617721 - 22301074;30032202 116895155 MODEL JAAIVD010000012;XM_032896522 XP_032752413 leucine-rich repeat-containing protein 53 protein-coding 625901728 Fbxo9 F-box protein 9 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN fat cell differentiation (ortholog); innate immune response (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); SCF ubiquitin ligase complex (ortholog) 8 72334729 72359255 - 22301074;30032202 116908308 MODEL JAAIVD010000027;XM_032911588 XP_032767479 F-box only protein 9 protein-coding 625901745 Maml2 mastermind like transcriptional coactivator 2 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN Notch signaling pathway (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH systemic juvenile rheumatoid arthritis (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 8 9260949 9579582 + 22301074;30032202 116907644 MODEL JAAIVD010000027;XM_032910711 XP_032766602 mastermind-like protein 2 protein-coding 625901754 LOC116900387 olfactory receptor 5D18-like 5 69700959 69701909 - 22301074;30032202 116900387 MODEL JAAIVD010000023;XM_032902134 XP_032758025 protein-coding 625901757 LOC116905271 E3 ubiquitin-protein ligase RNF113A 7 98528391 98529757 + 22301074;30032202 116905271 MODEL JAAIVD010000026;XM_032908123 XP_032764014 protein-coding 625901762 Rbp2 retinol binding protein 2 ENCODES a protein that exhibits binding (ortholog); lipid binding (ortholog); molecular carrier activity (ortholog); INVOLVED IN retinoid metabolic process (ortholog); PARTICIPATES IN retinol metabolic pathway; FOUND IN cytosol (ortholog); synaptic ribbon (ortholog) 8 89858382 89878633 + 30032202 116907075 MODEL JAAIVD010000027;XM_032910029 XP_032765920 retinol-binding protein 2 protein-coding 625901770 LOC116893706 olfactory receptor 5B3-like 2 13310310 13311248 - 22301074;30032202 116893706 MODEL JAAIVD010000001;XM_032895423 XP_032751314 protein-coding 625901773 LOC116895939 hydroxyacyl-thioester dehydratase type 2, mitochondrial-like 3 131974289 131974740 - 116895939 MODEL JAAIVD010000012 pseudo 625901774 Slc25a27 solute carrier family 25 member 27 ENCODES a protein that exhibits chloride transmembrane transporter activity (ortholog); protein homodimerization activity (ortholog); proton transmembrane transporter activity (ortholog); INVOLVED IN inner ear development (ortholog); intracellular triglyceride homeostasis (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH schizophrenia (ortholog); Spinal Cord Injuries (ortholog); FOUND IN apical part of cell (ortholog); mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog) 4 86175434 86202203 + 30032202 116899147 MODEL JAAIVD010000003;XM_032900688;XM_032900689;XM_032900690;XM_032900692;XM_032900693;XM_032900694;XM_032900695;XM_032900696;XM_032900697;XM_032900698 XP_032756579;XP_032756580;XP_032756581;XP_032756583;XP_032756584;XP_032756585;XP_032756586;XP_032756587;XP_032756588;XP_032756589 mitochondrial uncoupling protein 4 protein-coding 625901817 LOC116884858 high mobility group protein B1-like 15 41357974 41358487 + 116884858 MODEL JAAIVD010000010 pseudo 625901818 LOC116913917 AFG3-like protein 1 12 28600025 28601051 - 116913917 MODEL JAAIVD010000007 pseudo 625901819 Ccdc24 coiled-coil domain containing 24 1 39149032 39152803 + 116898050 MODEL JAAIVD010000025;XM_032899446;XM_032899454 XP_032755337;XP_032755345 coiled-coil domain-containing protein 24 protein-coding 625901836 LOC116889846 14-3-3 protein theta-like 1 151381898 151382563 - 116889846 MODEL JAAIVD010000025 pseudo 625901837 LOC116904600 mitochondrial import receptor subunit TOM20 homolog 6 24447707 24448138 + 22301074;30032202 116904600 MODEL JAAIVD010000024;XM_032907397 XP_032763288 protein-coding 625901840 LOC116897315 N-acetyltransferase ESCO1-like 3 209915892 209919999 + 30032202 116897315 MODEL JAAIVD010000012;XM_032899071 XP_032754962 protein-coding 625901845 As3mt arsenite methyltransferase ENCODES a protein that exhibits arsenite methyltransferase activity (ortholog); INVOLVED IN arsonoacetate metabolic process (ortholog); methylation (ortholog); response to arsenic-containing substance (ortholog); PARTICIPATES IN homocysteine metabolic pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH Arsenic Poisoning (ortholog); attention deficit hyperactivity disorder (ortholog); Birth Weight (ortholog); FOUND IN cytosol (ortholog) 2 46177715 46209116 + 30032202 116891256 MODEL JAAIVD010000001;XM_032892138 XP_032748029 protein-coding 625901858 LOC116909297 myosin-4 9 46839418 46862208 + 22301074;8227143 116909297 MODEL JAAIVD010000002;X72590;XM_032912835;XM_032912836;XM_032912837 CAA51188;XP_032768726;XP_032768727;XP_032768728 2B myosin heavy chain protein-coding 625901908 Acbd6 acyl-CoA binding domain containing 6 ENCODES a protein that exhibits enzyme activator activity (ortholog); fatty-acyl-CoA binding (ortholog); lipid binding (ortholog); INVOLVED IN protein myristoylation (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); NEURODEVELOPMENTAL DISORDER WITH PROGRESSIVE MOVEMENT ABNORMALITIES (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 10 34968251 34992705 + 22301074;30032202 116911750 MODEL JAAIVD010000005;XM_032915741 XP_032771632 acyl-CoA-binding domain-containing protein 6 protein-coding 625901916 Ppih peptidylprolyl isomerase H ENCODES a protein that exhibits peptidyl-prolyl cis-trans isomerase activity (ortholog); ribonucleoprotein complex binding (ortholog); INVOLVED IN positive regulation of viral genome replication (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); U4/U6 snRNP (ortholog) 1 37641650 37659560 + 22301074;30032202 116897626 MODEL JAAIVD010000025;XM_032899150;XM_032899151;XM_032899152 XP_032755041;XP_032755042;XP_032755043 peptidyl-prolyl cis-trans isomerase H protein-coding 625901935 LOC116890389 U6 spliceosomal RNA 1 195620939 195621042 - 116890389 MODEL JAAIVD010000025;XR_004386595 snrna 625901938 LOC116894686 40S ribosomal protein S10-like 2 212429994 212430511 - 116894686 MODEL JAAIVD010000001 pseudo 625901939 Ica1 islet cell autoantigen 1 ENCODES a protein that exhibits membrane curvature sensor activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN regulation of protein-containing complex assembly (ortholog); ASSOCIATED WITH diabetes mellitus (ortholog); type 1 diabetes mellitus (ortholog); FOUND IN cytosol (ortholog); dendrite (ortholog); Golgi membrane (ortholog) 6 129657781 129793304 + 22301074;30032202 116904077 MODEL JAAIVD010000024;XM_032906941;XM_032906942;XM_032906943;XM_032906944 XP_032762832;XP_032762833;XP_032762834;XP_032762835 protein-coding 625901964 Pogk pogo transposable element derived with KRAB domain FOUND IN nucleoplasm (ortholog) 10 45487734 45500358 - 22301074;30032202 116910862 MODEL JAAIVD010000005;XM_032914622;XM_032914623 XP_032770513;XP_032770514 pogo transposable element with KRAB domain protein-coding 625901977 Ampd1 adenosine monophosphate deaminase 1 ENCODES a protein that exhibits AMP deaminase activity (ortholog); identical protein binding (ortholog); myosin heavy chain binding (ortholog); INVOLVED IN GMP salvage (ortholog); IMP salvage (ortholog); response to ATP (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH Adenosine Monophosphate Deaminase Deficiency (ortholog); autistic disorder (ortholog); congestive heart failure (ortholog) 3 54940654 54963312 - 22301074;30032202 116896449 MODEL JAAIVD010000012;XM_032897604;XM_032897605;XM_032897606 XP_032753495;XP_032753496;XP_032753497 AMP deaminase 1 protein-coding 625902002 LOC116893504 zinc finger protein 595-like 2 186220639 186230377 - 22301074 116893504 MODEL JAAIVD010000001;XM_032895242 XP_032751133 protein-coding 625902008 LOC116887706 uncharacterized LOC116887706 1 55220434 55224965 - 116887706 MODEL JAAIVD010000025;XR_004386234 ncrna 625902012 LOC116908324 U6 spliceosomal RNA 8 67115344 67115448 + 116908324 MODEL JAAIVD010000027;XR_004388881 snrna 625902015 Cystm1 cysteine rich transmembrane module containing 1 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 15 7974737 8032937 - 30032202 116885004 MODEL JAAIVD010000010;XM_032886239;XM_032886240;XR_004385912 XP_032742130;XP_032742131 cysteine-rich and transmembrane domain-containing protein 1 protein-coding 625902029 Tmem213 transmembrane protein 213 FOUND IN endoplasmic reticulum membrane (ortholog) 6 101698774 101704731 - 116903956 MODEL JAAIVD010000024;XM_032906743 XP_032762634 protein-coding 625902034 Plbd2 phospholipase B domain containing 2 FOUND IN lysosome (ortholog) 16 33328036 33347950 + 22301074;30032202 116885414 MODEL JAAIVD010000004;XM_032886701 XP_032742592 putative phospholipase B-like 2 protein-coding 625902050 LOC116900147 40S ribosomal protein S16-like 5 15496346 15496801 + 116900147 MODEL JAAIVD010000023 pseudo 625902051 LOC116898560 cuticle protein 63-like 4 155629582 155630073 - 116898560 MODEL JAAIVD010000003;XM_032899768 XP_032755659 protein-coding 625902054 Trnav-aac transfer RNA valine (anticodon AAC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 124831289 124831361 + 116897673 MODEL JAAIVD010000012 trna 625902055 Mllt10 MLLT10 histone lysine methyltransferase DOT1L cofactor ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); nucleosome binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute monocytic leukemia (ortholog); acute myeloid leukemia (ortholog); melanoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) 14 5758511 5884272 - 30032202 116883767 MODEL JAAIVD010000009;XM_032885013 XP_032740904 protein AF-10 protein-coding 625902082 LOC116888608 60S ribosomal protein L21-like 1 96738597 96739079 - 116888608 MODEL JAAIVD010000025 pseudo 625902083 Pamr1 peptidase domain containing associated with muscle regeneration 1 ASSOCIATED WITH congestive heart failure (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog) 5 80396556 80484379 + 22301074 116901679 MODEL JAAIVD010000023;XM_032903792 XP_032759683 inactive serine protease PAMR1 protein-coding 625902098 LOC116905828 60S ribosomal protein L35-like 7 37428247 37428618 + 22301074;30032202 116905828 MODEL JAAIVD010000026;XM_032908794 XP_032764685 protein-coding 625902101 Plppr2 phospholipid phosphatase related 2 8 18186853 18199368 + 30032202 116906575 MODEL JAAIVD010000027;XM_032909307;XM_032909308;XM_032909309 XP_032765198;XP_032765199;XP_032765200 phospholipid phosphatase-related protein type 2 protein-coding 625902123 LOC116902622 small nucleolar RNA SNORD70 5 6651959 6652042 - 116902622 MODEL JAAIVD010000023;XR_004388200 snorna 625902126 Zbtb34 zinc finger and BTB domain containing 34 ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN nucleoplasm (ortholog) 5 2209976 2232543 + 22301074;30032202 116901120 MODEL JAAIVD010000023;XM_032902696;XM_032902697;XM_032902698;XM_032902699 XP_032758587;XP_032758588;XP_032758589;XP_032758590 zinc finger and BTB domain-containing protein 34 protein-coding 625902143 Nr1d1 nuclear receptor subfamily 1 group D member 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to interleukin-1 (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH alcoholic liver cirrhosis (ortholog); brain small vessel disease (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); dendrite (ortholog) 9 55660965 55668429 + 22301074;30032202 116909736 MODEL JAAIVD010000002;XM_032913414 XP_032769305 protein-coding 625902155 Habp4 hyaluronan binding protein 4 ENCODES a protein that exhibits SUMO binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); PML body organization (ortholog); positive regulation of RNA splicing (ortholog); FOUND IN Cajal body (ortholog); cytoplasm (ortholog); cytoplasmic stress granule (ortholog) 14 75368272 75390324 - 30032202 116883624 MODEL JAAIVD010000009;XM_032884814 XP_032740705 intracellular hyaluronan-binding protein 4 protein-coding 625902167 Loxl2 lysyl oxidase like 2 ENCODES a protein that exhibits calcium ion binding (ortholog); copper ion binding (ortholog); oligosaccharide binding (ortholog); INVOLVED IN collagen fibril organization (ortholog); endothelial cell migration (ortholog); endothelial cell proliferation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Neoplasms (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN basement membrane (ortholog); chromatin (ortholog); endoplasmic reticulum (ortholog) 12 54636444 54719638 - 22301074;30032202 116914076 MODEL JAAIVD010000007;XM_032918383 XP_032774274 lysyl oxidase homolog 2 protein-coding 625902185 LOC116895453 uncharacterized LOC116895453 3 78116186 78128508 - 116895453 MODEL JAAIVD010000012;XR_004387277 ncrna 625902190 LOC116888677 uncharacterized LOC116888677 X 114049955 114053179 - 116888677 MODEL JAAIVD010000014;XR_004386335 ncrna 625902195 Lrrcc1 leucine rich repeat and coiled-coil centrosomal protein 1 ASSOCIATED WITH basal cell carcinoma (ortholog); Joubert syndrome (ortholog); FOUND IN centrosome (ortholog) 3 157613632 157642601 - 22301074;30032202 116897085 MODEL JAAIVD010000012;XM_032898711;XM_032898712;XM_032898713;XM_032898714;XM_032898715;XM_032898716;XM_032898718 XP_032754602;XP_032754603;XP_032754604;XP_032754605;XP_032754606;XP_032754607;XP_032754609 leucine-rich repeat and coiled-coil domain-containing protein 1 protein-coding 625902231 LOC116905375 transcription and mRNA export factor ENY2-like 1 149355674 149356213 + 116905375 MODEL JAAIVD010000025 pseudo 625902232 LOC116911869 U4 spliceosomal RNA 10 19922803 19922938 - 116911869 MODEL JAAIVD010000005;XR_004389383 snrna 625902235 Fanci FA complementation group I ENCODES a protein that exhibits DNA polymerase binding (ortholog); INVOLVED IN positive regulation of protein ubiquitination (ortholog); ASSOCIATED WITH breast cancer (ortholog); colorectal cancer (ortholog); Fanconi anemia (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog) 2 120802684 120858047 - 22301074;30032202 116891943 MODEL JAAIVD010000001;XM_032893383 XP_032749274 Fanconi anemia group I protein protein-coding 625902277 LOC116910636 U6 spliceosomal RNA 9 48506906 48507012 + 116910636 MODEL JAAIVD010000002;XR_004389174 snrna 625902280 Arf5 ARF GTPase 5 INVOLVED IN lysosomal membrane organization (ortholog); positive regulation of TOR signaling (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; FOUND IN cytoplasm (ortholog); lysosomal membrane (ortholog); plasma membrane (ortholog) 6 111112050 111114992 - 22301074;30032202 116904028 MODEL JAAIVD010000024;XM_032906858 XP_032762749 ADP ribosylation factor 5;ADP-ribosylation factor 5 protein-coding 625902290 Cass4 Cas scaffold protein family member 4 ENCODES a protein that exhibits protein tyrosine kinase binding (ortholog); INVOLVED IN positive regulation of cell migration (ortholog); positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); positive regulation of protein tyrosine kinase activity (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); FOUND IN cytoplasm (ortholog); focal adhesion (ortholog) 5 145567760 145607701 - 22301074;30032202 116900755 MODEL JAAIVD010000023;XM_032902465 XP_032758356 cas scaffolding protein family member 4 protein-coding 625902299 Mreg melanoregulin ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); INVOLVED IN developmental pigmentation (ortholog); melanocyte differentiation (ortholog); melanosome localization (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); late endosome membrane (ortholog); melanosome (ortholog) 4 145737222 145805073 - 22301074;30032202 116899479 MODEL JAAIVD010000003;XM_032901312;XM_032901313 XP_032757203;XP_032757204 protein-coding 625902311 Camkk2 calcium/calmodulin dependent protein kinase kinase 2 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium/calmodulin-dependent protein kinase activity (ortholog); calmodulin binding (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); CAMKK-AMPK signaling cascade (ortholog); positive regulation of autophagy of mitochondrion (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH high grade glioma (ortholog); Ovarian Neoplasms (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytosol (ortholog) 16 31045537 31093391 + 22301074;30032202 116885305 MODEL JAAIVD010000004;XM_032886559;XM_032886560 XP_032742450;XP_032742451 calcium/calmodulin-dependent protein kinase kinase 2 protein-coding 625902335 LOC116893175 uncharacterized LOC116893175 2 103388292 103392997 - 116893175 MODEL JAAIVD010000001 pseudo 625902336 LOC116886615 mitogen-activated protein kinase 4-like 17 14514806 14515386 + 116886615 MODEL JAAIVD010000011 pseudo 625902337 LOC116892408 zinc finger protein 780A-like 2 168003348 168021281 + 22301074 116892408 MODEL JAAIVD010000001;XM_032894087 XP_032749978 protein-coding 625902346 Six2 SIX homeobox 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN anterior/posterior axis specification (ortholog); cell migration (ortholog); cell population proliferation (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); CAKUT (ortholog); chronic kidney disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 7 7310659 7313982 + 22301074;30032202 116905648 MODEL JAAIVD010000026;XM_032908624 XP_032764515 homeobox protein SIX2 protein-coding 625902351 Jakmip3 Janus kinase and microtubule interacting protein 3 2 62778771 62885356 - 30032202 116891367 MODEL JAAIVD010000001;XM_032892364;XR_004386832 XP_032748255 janus kinase and microtubule-interacting protein 3 protein-coding 625902381 Nrtn neurturin ENCODES a protein that exhibits growth factor activity (ortholog); heparan sulfate binding (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cell surface receptor signaling pathway via STAT (ortholog); glial cell-derived neurotrophic factor receptor signaling pathway (ortholog); ASSOCIATED WITH Hirschsprung's disease (ortholog); keratoconjunctivitis sicca (ortholog); FOUND IN axon (ortholog); extracellular region (ortholog) 4 88124231 88130074 - 22301074;30032202 116898066 MODEL JAAIVD010000003;XM_032899460 XP_032755351 protein-coding 625902388 Spc24 SPC24 component of NDC80 kinetochore complex INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); FOUND IN kinetochore (ortholog); Ndc80 complex (ortholog); nucleolus (ortholog) 8 18023746 18029160 - 116907964 MODEL JAAIVD010000027;XM_032911192 XP_032767083 kinetochore protein Spc24 protein-coding 625902396 Amdhd1 amidohydrolase domain containing 1 PARTICIPATES IN histidine metabolic pathway; histidinemia pathway 1 172577122 172592405 - 22301074;30032202 116889982 MODEL JAAIVD010000025;XM_032890774 XP_032746665 probable imidazolonepropionase protein-coding 625902409 LOC116910095 olfactory receptor 6C6-like 1 161396246 161397172 + 116910095 MODEL JAAIVD010000025 pseudo 625902410 LOC116894468 40S ribosomal protein SA-like 2 167354259 167355094 + 116894468 MODEL JAAIVD010000001 pseudo 625902411 Hr HR lysine demethylase and nuclear receptor corepressor ENCODES a protein that exhibits nuclear thyroid hormone receptor binding (ortholog); nuclear vitamin D receptor binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH alopecia (ortholog); alopecia universalis (ortholog); atrichia with papular lesions (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) 12 53781538 53801231 - 30032202 116913346 MODEL JAAIVD010000007;XM_032917497;XM_032917498 XP_032773388;XP_032773389 lysine-specific demethylase hairless protein-coding 625902438 Grin1 glutamate ionotropic receptor NMDA type subunit 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); calcium channel activity (ortholog); calcium ion binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); associative learning (ortholog); calcium ion homeostasis (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Alzheimer's disease (ortholog); Animal Disease Models (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell surface (ortholog); cytoplasm (ortholog) 5 11867574 11894045 + 22301074;30032202 116901309 MODEL JAAIVD010000023;XM_032903111;XM_032903112;XM_032903113;XM_032903114;XM_032903116;XM_032903117;XM_032903118;XM_032903119 XP_032759002;XP_032759003;XP_032759004;XP_032759005;XP_032759007;XP_032759008;XP_032759009;XP_032759010 glutamate receptor ionotropic, NMDA 1 protein-coding 625902472 Galr1 galanin receptor 1 ENCODES a protein that exhibits galanin receptor activity (ortholog); neuropeptide binding (ortholog); peptide hormone binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); positive regulation of cortisol secretion (ortholog); ASSOCIATED WITH Cocaine-Related Disorders (ortholog); depressive disorder (ortholog); major depressive disorder (ortholog); FOUND IN plasma membrane (ortholog) 15 49910860 49926676 + 22301074;30032202 116884765 MODEL JAAIVD010000010;XM_032885982 XP_032741873 galanin receptor type 1 protein-coding 625902479 LOC116910688 small Cajal body-specific RNA 4 9 67900580 67900703 + 116910688 MODEL JAAIVD010000002;XR_004389217 ncrna 625902482 LOC116914945 ral guanine nucleotide dissociation stimulator-like 13 11579019 11581881 - 116914945 MODEL JAAIVD010000008 pseudo 625902483 LOC116899491 40S ribosomal protein S21-like 4 147514345 147514630 + 22301074;30032202 116899491 MODEL JAAIVD010000003;XM_032901324 XP_032757215 protein-coding 625902487 Washc1 WASH complex subunit 1 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); gamma-tubulin binding (ortholog); phosphatidylinositol 3-kinase inhibitor activity (ortholog); INVOLVED IN Arp2/3 complex-mediated actin nucleation (ortholog); dendritic cell antigen processing and presentation (ortholog); early endosome to late endosome transport (ortholog); PARTICIPATES IN retromer-mediated pathway; FOUND IN autophagosome (ortholog); BLOC-1 complex (ortholog); centrosome (ortholog) 4 154688397 154691430 - 30032202 116898550 MODEL JAAIVD010000003;XM_032899762 XP_032755653 protein-coding 625902497 LOC116884080 small nucleolar RNA SNORA17 14 8212632 8212764 + 116884080 MODEL JAAIVD010000009;XR_004385825 snorna 625902500 LOC116915172 U6 spliceosomal RNA 13 77879313 77879420 - 116915172 MODEL JAAIVD010000008;XR_004389833 snrna 625902503 Gapdhs glyceraldehyde-3-phosphate dehydrogenase, spermatogenic ENCODES a protein that exhibits glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); glycolytic process (ortholog); spermatid development (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); prostate cancer (ortholog); FOUND IN cilium (ortholog); motile cilium (ortholog); sperm fibrous sheath (ortholog) 2 165272116 165286677 + 22301074;30032202 116892300 MODEL JAAIVD010000001;XM_032893916;XM_032893917;XM_032893918 XP_032749807;XP_032749808;XP_032749809 glyceraldehyde-3-phosphate dehydrogenase, testis-specific protein-coding 625902525 LOC116908430 small nucleolar RNA SNORD5 8 11108863 11108934 + 116908430 MODEL JAAIVD010000027;XR_004388961 snorna 625902528 Nme7 NME/NM23 family member 7 ENCODES a protein that exhibits 3'-5'-DNA exonuclease activity (ortholog); nucleoside diphosphate kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN brain development (ortholog); cellular response to leukemia inhibitory factor (ortholog); cilium assembly (ortholog); ASSOCIATED WITH COVID-19 (ortholog); gastrointestinal stromal tumor (ortholog); hydrocephalus (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); centrosome (ortholog) 10 43532416 43662125 + 22301074;30032202 116911067 MODEL JAAIVD010000005;XM_032914833;XM_032914834;XM_032914835 XP_032770724;XP_032770725;XP_032770726 nucleoside diphosphate kinase 7 protein-coding 625902554 LOC116906355 small nucleolar RNA SNORD113/SNORD114 family 7 127213977 127214057 + 116906355 MODEL JAAIVD010000026 pseudo 625902555 Nrsn2 neurensin 2 FOUND IN cytoplasmic vesicle (ortholog); neuronal cell body (ortholog); plasma membrane (ortholog) 5 131691662 131699887 - 30032202 116902120 MODEL JAAIVD010000023;XM_032904435 XP_032760326 neurensin-2 protein-coding 625902562 LOC116898413 60S ribosomal protein L35-like 4 87637459 87647635 + 116898413 MODEL JAAIVD010000003 pseudo 625902563 LOC116883229 interleukin-19-like 14 55247855 55258274 - 116883229 MODEL JAAIVD010000009 pseudo 625902564 Elp3 elongator acetyltransferase complex subunit 3 ENCODES a protein that exhibits acetyltransferase activity (ortholog); INVOLVED IN central nervous system development (ortholog); neuron migration (ortholog); positive regulation of cell migration (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Animal Disease Models (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); elongator holoenzyme complex (ortholog) 12 58843081 58904060 + 22301074;30032202 116914014 MODEL JAAIVD010000007;XM_032918285;XM_032918286 XP_032774176;XP_032774177 elongator complex protein 3 protein-coding 625902586 Efcab2 EF-hand calcium binding domain 2 ENCODES a protein that exhibits calcium ion binding (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN sperm principal piece (ortholog) 10 56748710 56831974 + 22301074 116911070 MODEL JAAIVD010000005;XM_032914838;XM_032914840;XM_032914841;XM_032914842 XP_032770729;XP_032770731;XP_032770732;XP_032770733 dynein regulatory complex protein 8 protein-coding 625902604 LOC116900630 uncharacterized LOC116900630 5 109644632 109657921 - 116900630 MODEL JAAIVD010000023;XR_004387941 ncrna 625902611 LOC116887017 14-3-3 protein theta-like 1 32342245 32342998 - 116887017 MODEL JAAIVD010000025 pseudo 625902612 Slc35g6 solute carrier family 35 member G6 9 49365339 49366178 - 116910306 MODEL JAAIVD010000002;XM_032914171 XP_032770062 protein-coding 625902615 Hoxb13 homeobox B13 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); methyl-CpG binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN angiogenesis (ortholog); epithelial cell maturation involved in prostate gland development (ortholog); morphogenesis of an epithelium (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); cervical cancer (ortholog); ductal carcinoma in situ (ortholog); FOUND IN nucleoplasm (ortholog); transcription regulator complex (ortholog) 9 58182465 58184720 - 22301074;30032202 116909960 MODEL JAAIVD010000002;XM_032913736 XP_032769627 homeobox protein Hox-B13 protein-coding 625902621 LOC116888837 non-histone chromosomal protein HMG-17-like X 117476559 117476841 - 116888837 MODEL JAAIVD010000014 pseudo 625902622 Ptcd2 pentatricopeptide repeat domain 2 INVOLVED IN heart development (ortholog); kidney development (ortholog); liver development (ortholog); FOUND IN mitochondrion (ortholog) 3 197231810 197259479 + 22301074;30032202 116897250 MODEL JAAIVD010000012;XM_032898979;XM_032898980 XP_032754870;XP_032754871 pentatricopeptide repeat-containing protein 2, mitochondrial protein-coding 625902639 LOC116901020 eukaryotic translation initiation factor 1-like 5 128581694 128596540 + 22301074;30032202 116901020 MODEL JAAIVD010000023;XM_032902615 XP_032758506 protein-coding 625902644 Skp2 S-phase kinase associated protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN cellular response to cell-matrix adhesion (ortholog); defense response to virus (ortholog); G1/S transition of mitotic cell cycle (ortholog); PARTICIPATES IN Notch signaling pathway; p53 signaling pathway; ASSOCIATED WITH Brain Injuries (ortholog); breast cancer (ortholog); cervix uteri carcinoma in situ (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 3 171445808 171473472 + 22301074 116897134 MODEL JAAIVD010000012;XM_032898798 XP_032754689 S-phase kinase-associated protein 2 protein-coding 625902658 LOC116894498 phosphatidylethanolamine-binding protein 1-like 2 172616603 172617294 + 116894498 MODEL JAAIVD010000001 pseudo 625902659 Flot2 flotillin 2 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); protease binding (ortholog); INVOLVED IN anterograde dendritic transport (ortholog); negative regulation of amyloid precursor protein catabolic process (ortholog); negative regulation of gene expression (ortholog); FOUND IN acrosomal membrane (ortholog); adherens junction (ortholog); apical plasma membrane (ortholog) 9 92386336 92407707 - 30032202 116908797 MODEL JAAIVD010000002;XM_032912193;XM_032912194;XM_032912195;XM_032912197;XM_032912198;XM_032912199 XP_032768084;XP_032768085;XP_032768086;XP_032768088;XP_032768089;XP_032768090 flotillin-2 protein-coding 625902689 Cbx8 chromobox 8 ENCODES a protein that exhibits histone H3K27me3 reader activity (ortholog); single-stranded RNA binding (ortholog); ubiquitin-protein transferase activator activity (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of cell population proliferation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); glioblastoma (ortholog); spastic cerebral palsy (ortholog); FOUND IN chromatin (ortholog); heterochromatin (ortholog); nucleoplasm (ortholog) 9 64994574 64997078 + 116908713 MODEL JAAIVD010000002;XM_032912052 XP_032767943 chromobox protein homolog 8 protein-coding 625902698 LOC116884116 U6 spliceosomal RNA 14 57250031 57250136 - 116884116 MODEL JAAIVD010000009;XR_004385847 snrna 625902701 LOC116902977 60S ribosomal protein L35-like 6 131931537 131931908 - 22301074;30032202 116902977 MODEL JAAIVD010000024;XM_032905296 XP_032761187 protein-coding 625902704 Tmem218 transmembrane protein 218 ASSOCIATED WITH Joubert syndrome (ortholog); Joubert Syndrome 39 (ortholog); Meckel syndrome 4 (ortholog) 8 33388654 33405415 + 116907705 MODEL JAAIVD010000027;XM_032910827;XM_032910828 XP_032766718;XP_032766719 protein-coding 625902715 LOC116895942 40S ribosomal protein S14-like 3 133204741 133205202 + 116895942 MODEL JAAIVD010000012 pseudo 625902716 LOC116908130 olfactory receptor 8D1-like 8 32665077 32665941 + 116908130 MODEL JAAIVD010000027 pseudo 625902717 Rhebl1 RHEB like 1 ENCODES a protein that exhibits GTP binding (ortholog); INVOLVED IN intracellular signal transduction (ortholog); TOR signaling (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog) 1 271699198 271702992 - 22301074;30032202 116884876 MODEL JAAIVD010000025;XM_032886122 XP_032742013 GTPase RhebL1 protein-coding 625902729 LOC116895872 PACRG-like protein 3 105148002 105212167 + 116895872 MODEL JAAIVD010000012 pseudo 625902730 LOC116885258 mitochondrial import inner membrane translocase subunit Tim23-like 16 29277988 29278581 - 116885258 MODEL JAAIVD010000004 pseudo 625902731 Myo6 myosin VI ENCODES a protein that exhibits actin filament binding (ortholog); ADP binding (ortholog); calmodulin binding (ortholog); INVOLVED IN actin filament-based movement (ortholog); cellular response to electrical stimulus (ortholog); chemical synaptic transmission (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; E-cadherin signaling pathway; ASSOCIATED WITH autosomal dominant nonsyndromic deafness (ortholog); autosomal dominant nonsyndromic deafness 22 (ortholog); autosomal recessive nonsyndromic deafness (ortholog); FOUND IN actin filament (ortholog); apical part of cell (ortholog); axon (ortholog) 8 74395096 74537284 + 22301074;30032202 116906551 MODEL JAAIVD010000027;XM_032909265 XP_032765156 unconventional myosin-VI protein-coding 625902772 Fxyd1 FXYD domain containing ion transport regulator 1 ENCODES a protein that exhibits ATPase binding (ortholog); myosin binding (ortholog); sodium channel regulator activity (ortholog); INVOLVED IN monoatomic anion transport (ortholog); negative regulation of protein glutathionylation (ortholog); organic acid transport (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); congestive heart failure (ortholog); Myocardial Ischemia (ortholog); FOUND IN apical plasma membrane (ortholog); caveola (ortholog); intercalated disc (ortholog) 2 164975492 164979571 + 22301074;30032202 116892291 MODEL JAAIVD010000001;XM_032893892;XM_032893893;XM_032893895;XM_032893896;XM_032893897;XM_032893898 XP_032749783;XP_032749784;XP_032749786;XP_032749787;XP_032749788;XP_032749789 phospholemman protein-coding 625902798 LOC116885039 small nucleolar RNA SNORA48 15 73029137 73029279 + 116885039 MODEL JAAIVD010000010;XR_004385926 snorna 625902801 LOC116890601 small nucleolar RNA SNORA40 1 46384128 46384255 - 116890601 MODEL JAAIVD010000025;XR_004386752 snorna 625902804 Ca2 carbonic anhydrase 2 ENCODES a protein that exhibits arylesterase activity (ortholog); carbonate dehydratase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN angiotensin-activated signaling pathway (ortholog); cellular response to fluid shear stress (ortholog); estrous cycle (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); alcoholic pancreatitis (ortholog); Animal Disease Models (ortholog); FOUND IN apical part of cell (ortholog); axon (ortholog); basolateral plasma membrane (ortholog) 3 157353310 157375549 - 22301074;30032202 116897077 MODEL JAAIVD010000012;XM_032898702 XP_032754593 protein-coding 625902815 Slc16a5 solute carrier family 16 member 5 9 68618445 68630039 - 22301074;30032202 116909925 MODEL JAAIVD010000002;XM_032913690;XM_032913691;XM_032913692;XM_032913693;XM_032913694 XP_032769581;XP_032769582;XP_032769583;XP_032769584;XP_032769585 monocarboxylate transporter 6 protein-coding 625902838 Fat2 FAT atypical cadherin 2 INVOLVED IN cell-substrate adhesion (ortholog); epithelial cell migration (ortholog); homophilic cell-cell adhesion (ortholog); ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); spastic ataxia (ortholog); spinocerebellar ataxia 45 (ortholog); FOUND IN adherens junction (ortholog) 9 37668238 37734001 - 22301074;30032202 116908783 MODEL JAAIVD010000002;XM_032912167 XP_032768058 protocadherin Fat 2 protein-coding 625902867 LOC116894309 solute carrier family 22 member 27-like 2 143522681 143577529 - 22301074;30032202 116894309 MODEL JAAIVD010000001;XM_032896005 XP_032751896 protein-coding 625902879 Camk2d calcium/calmodulin dependent protein kinase II delta ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); calmodulin binding (ortholog); identical protein binding (ortholog); INVOLVED IN calcium ion transport (ortholog); cardiac muscle cell contraction (ortholog); cardiac muscle contraction (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; type II interferon signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); Cardiomegaly (ortholog); epilepsy (ortholog); FOUND IN axon initial segment (ortholog); calcium- and calmodulin-dependent protein kinase complex (ortholog); cochlear hair cell ribbon synapse (ortholog) 3 32588559 32853343 - 22301074;30032202 116896279 MODEL JAAIVD010000012;XM_032897359;XM_032897360;XM_032897361 XP_032753250;XP_032753251;XP_032753252 calcium/calmodulin-dependent protein kinase type II subunit delta protein-coding 625902909 Atp2b2 ATPase plasma membrane Ca2+ transporting 2 ENCODES a protein that exhibits ATP binding (ortholog); calcium ion binding (ortholog); calcium-dependent ATPase activity (ortholog); INVOLVED IN auditory receptor cell stereocilium organization (ortholog); calcium ion transport (ortholog); cell morphogenesis (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH agenesis of the corpus callosum with peripheral neuropathy (ortholog); autosomal dominant nonsyndromic deafness (ortholog); autosomal dominant nonsyndromic deafness 82 (ortholog); FOUND IN apical plasma membrane (ortholog); cilium (ortholog); cytoplasm (ortholog) 6 32479315 32789906 + 22301074;30032202 116903396 MODEL JAAIVD010000024;XM_032905898;XM_032905899;XM_032905900;XM_032905902;XM_032905903;XM_032905904;XM_032905905;XM_032905906;XM_032905907 XP_032761789;XP_032761790;XP_032761791;XP_032761793;XP_032761794;XP_032761795;XP_032761796;XP_032761797;XP_032761798 plasma membrane calcium-transporting ATPase 2 protein-coding 625902959 Sash3 SAM and SH3 domain containing 3 INVOLVED IN homeostasis of number of cells within a tissue (ortholog); positive regulation of adaptive immune response (ortholog); positive regulation of B cell proliferation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); immunodeficiency 102 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) X 110247426 110262166 - 22301074;30032202 116889198 MODEL JAAIVD010000014;XM_032890357 XP_032746248 SAM and SH3 domain-containing protein 3 protein-coding 625902971 Garem2 GRB2 associated regulator of MAPK1 subtype 2 INVOLVED IN cognition (ortholog); neuron projection extension (ortholog); response to stress (ortholog) 7 23920142 23932891 - 116906013 MODEL JAAIVD010000026;XM_032909054 XP_032764945 GRB2-associated and regulator of MAPK protein 2 protein-coding 625902981 Aqp6 aquaporin 6 ENCODES a protein that exhibits ammonium channel activity (ortholog); carbon dioxide transmembrane transporter activity (ortholog); monoatomic anion channel activity (ortholog); INVOLVED IN nitrate transmembrane transport (ortholog); odontogenesis (ortholog); renal water transport (ortholog); PARTICIPATES IN water transport pathway; FOUND IN cytoplasmic vesicle membrane (ortholog) 1 272407639 272410534 + 22301074;30032202 116890252 MODEL JAAIVD010000025;XM_032890978 XP_032746869 aquaporin-6 protein-coding 625902989 Cep295 centrosomal protein 295 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN centriole replication (ortholog); positive regulation of centriole elongation (ortholog); positive regulation of centrosome duplication (ortholog); ASSOCIATED WITH Meckel syndrome (ortholog); Seckel syndrome 11 (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); cytoplasm (ortholog) 8 11111310 11146683 - 30032202 116906944 MODEL JAAIVD010000027;XM_032909868 XP_032765759 centrosomal protein of 295 kDa protein-coding 625903021 Stim2 stromal interaction molecule 2 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); calcium ion binding (ortholog); store-operated calcium channel activity (ortholog); INVOLVED IN activation of store-operated calcium channel activity (ortholog); gene expression (ortholog); intracellular calcium ion homeostasis (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Weight Gain (ortholog); FOUND IN endoplasmic reticulum (ortholog); plasma membrane (ortholog) 11 52017754 52153977 - 22301074;30032202 116912912 MODEL JAAIVD010000006;XM_032917169 XP_032773060 protein-coding 625903037 Clk2 CDC like kinase 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein serine/threonine kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN negative regulation of gluconeogenesis (ortholog); peptidyl-tyrosine phosphorylation (ortholog); protein autophosphorylation (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 3 64499608 64511201 - 22301074;30032202 116896664 MODEL JAAIVD010000012;XM_032898011;XM_032898012;XM_032898013;XM_032898014;XM_032898015;XM_032898016;XM_032898017;XM_032898018;XM_032898019;XM_032898021 XP_032753902;XP_032753903;XP_032753904;XP_032753905;XP_032753906;XP_032753907;XP_032753908;XP_032753909;XP_032753910;XP_032753912 dual specificity protein kinase CLK2 protein-coding 625903076 LOC116912005 rabenosyn-5-like 11 55674724 55676917 - 116912005 MODEL JAAIVD010000006 pseudo 625903077 Apof apolipoprotein F INVOLVED IN cholesterol efflux (ortholog); cholesterol metabolic process (ortholog); triglyceride metabolic process (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN extracellular region (ortholog) 1 155744805 155746251 + 30032202 116905954 MODEL JAAIVD010000025;XM_032908958 XP_032764849 protein-coding 625903083 Rasa4b RAS p21 protein activator 4B 16 17897173 17924794 - 22301074 116885636 MODEL JAAIVD010000004;XM_032886943 XP_032742834 ras GTPase-activating protein 4B protein-coding 625903108 LOC116904307 elongation factor 1-gamma-like 6 51686339 51691530 - 116904307 MODEL JAAIVD010000024 pseudo 625903109 LOC116899786 U6 spliceosomal RNA 4 93155072 93155179 + 116899786 MODEL JAAIVD010000003;XR_004387794 snrna 625903112 LOC116904350 tubulin alpha-1B chain-like 6 74358324 74369543 - 116904350 MODEL JAAIVD010000024 pseudo 625903113 Polrmt RNA polymerase mitochondrial ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); DNA-directed RNA polymerase activity (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN mitochondrial transcription (ortholog); transcription initiation at mitochondrial promoter (ortholog); ASSOCIATED WITH Alpers-Huttenlocher syndrome (ortholog); combined oxidative phosphorylation deficiency 55 (ortholog); long QT syndrome (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog); mitochondrion (ortholog) 1 155127089 155137444 + 22301074;30032202 116905693 MODEL JAAIVD010000025;XM_032908675 XP_032764566 DNA-directed RNA polymerase, mitochondrial protein-coding 625903138 Brf1 BRF1 general transcription factor IIIB subunit INVOLVED IN positive regulation of transcription by RNA polymerase III (ortholog); regulation of mRNA stability (ortholog); PARTICIPATES IN histone modification pathway; RNA polymerase III transcription pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Cardiomegaly (ortholog); cerebellofaciodental syndrome (ortholog) 7 130561434 130604937 - 22301074;30032202 116905526 MODEL JAAIVD010000026;XM_032908552 XP_032764443 BRF1 RNA polymerase III transcription initiation factor subunit;transcription factor IIIB 90 kDa subunit protein-coding 625903160 LOC116895377 complex III assembly factor LYRM7-like 3 55026458 55027307 - 116895377 MODEL JAAIVD010000012 pseudo 625903161 LOC116912701 permeability factor 2-like 11 4207565 4208368 + 22301074;30032202 116912701 MODEL JAAIVD010000006;XM_032916830 XP_032772721 protein-coding 625903168 LOC116885084 U6 spliceosomal RNA 15 3531328 3531427 + 116885084 MODEL JAAIVD010000010 pseudo 625903169 LOC116886431 chloride channel protein ClC-Kb 1 16731745 16743082 + 22301074;30032202;8021279 116886431 MODEL D26111;JAAIVD010000025;XM_032887919 BAA05107;XP_032743810 ClC-K2S protein-coding 625903192 LOC116890296 U2 spliceosomal RNA 1 38108089 38108196 - 116890296 MODEL JAAIVD010000025 pseudo 625903193 S1pr1 sphingosine-1-phosphate receptor 1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); G protein-coupled receptor binding (ortholog); sphingolipid binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); angiogenesis (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphai family; platelet-derived growth factor signaling pathway; sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Cardiomegaly (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog); presynapse (ortholog) 3 43899228 43903851 - 22301074;30032202 116896340 MODEL JAAIVD010000012;XM_032897443 XP_032753334 sphingosine 1-phosphate receptor 1 protein-coding 625903199 Prpf39 pre-mRNA processing factor 39 7 78740898 78765710 + 22301074;30032202 116905103 MODEL JAAIVD010000026;XM_032907834;XM_032907835;XM_032907836;XM_032907837;XM_032907838 XP_032763725;XP_032763726;XP_032763727;XP_032763728;XP_032763729 pre-mRNA-processing factor 39 protein-coding 625903233 Micos10 mitochondrial contact site and cristae organizing system subunit 10 INVOLVED IN cristae formation (ortholog); PARTICIPATES IN mitochondrial protein import pathway; FOUND IN mitochondrion (ortholog) 1 19071266 19097250 + 22301074;30032202 116893752 MODEL JAAIVD010000025;XM_032895461 XP_032751352 MICOS complex subunit MIC10 protein-coding 625903241 Cenpb centromere protein B ASSOCIATED WITH inner ear disease (ortholog); primary biliary cholangitis (ortholog); FOUND IN chromosome (ortholog); chromosome, centromeric region (ortholog); condensed chromosome, centromeric region (ortholog) 5 110903941 110906739 - 22301074;30032202 116901985 MODEL JAAIVD010000023;XM_032904233 XP_032760124 major centromere autoantigen B protein-coding 625903246 Spmip2 sperm microtubule inner protein 2 3 73937554 74052679 - 116896765 MODEL JAAIVD010000012;XM_032898218;XM_032898219;XM_032898220 XP_032754109;XP_032754110;XP_032754111 C3H4orf45 chromosome 3 C4orf45 homolog;sperm associated microtubule inner protein 2;uncharacterized protein C4orf45 homolog protein-coding 625903264 Zkscan8 zinc finger with KRAB and SCAN domains 8 14 41124419 41149193 - 30032202 116883290 MODEL JAAIVD010000009;XM_032884285;XM_032884286;XM_032884287;XR_004385742;XR_004385743 XP_032740176;XP_032740177;XP_032740178 zinc finger protein with KRAB and SCAN domains 8 protein-coding 625903288 LOC116887621 olfactory receptor 11A1-like 18 10295867 10297364 - 116887621 MODEL JAAIVD010000013 pseudo 625903289 LOC116905917 ras-related protein Rap-2a-like 7 129063360 129065376 - 22301074;30032202 116905917 MODEL JAAIVD010000026;XM_032908904 XP_032764795 protein-coding 625903294 Sun3 Sad1 and UNC84 domain containing 3 FOUND IN meiotic nuclear membrane microtubule tethering complex (ortholog) 11 78077766 78110780 - 30032202 116912711 MODEL JAAIVD010000006;XM_032916837;XM_032916838 XP_032772728;XP_032772729 SUN domain-containing protein 3 protein-coding 625903313 Klhl7 kelch like family member 7 ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN protein ubiquitination (ortholog); ASSOCIATED WITH Bohring Syndrome (ortholog); cold-induced sweating syndrome (ortholog); cold-induced sweating syndrome 1 (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); cytosol (ortholog); nucleolus (ortholog) 6 153314194 153363681 + 22301074 116904198 MODEL JAAIVD010000024;XM_032907110;XM_032907111 XP_032763001;XP_032763002 kelch-like protein 7 protein-coding 625903331 LOC116886962 twinfilin-2-like 18 33778844 33780106 + 30032202 116886962 MODEL JAAIVD010000013;XM_032888457 XP_032744348 protein-coding 625903334 Pgk1 phosphoglycerate kinase 1 ENCODES a protein that exhibits ADP binding (ortholog); ATP binding (ortholog); phosphoglycerate kinase activity (ortholog); INVOLVED IN canonical glycolysis (ortholog); cellular response to hypoxia (ortholog); epithelial cell differentiation (ortholog); PARTICIPATES IN gluconeogenesis pathway; glycolysis pathway; hypoxia inducible factor pathway; ASSOCIATED WITH generalized epilepsy (ortholog); genetic disease (ortholog); hemolytic anemia (ortholog); FOUND IN cytosol (ortholog); extracellular region (ortholog); membrane raft (ortholog) X 65751204 65767555 + 22301074;30032202 116888744 MODEL JAAIVD010000014;XM_032890039 XP_032745930 protein-coding 625903349 Hoxa2 homeobox A2 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); brain segmentation (ortholog); cell fate commitment (ortholog); ASSOCIATED WITH Congenital Microtia (ortholog); genetic disease (ortholog); Hearing Loss (ortholog); FOUND IN nucleus (ortholog) 6 88897507 88900036 + 22301074 116903811 MODEL JAAIVD010000024;XM_032906514 XP_032762405 homeobox protein Hox-A2 protein-coding 625903355 LOC116912939 uncharacterized LOC116912939 1 248469143 248472893 + 116912939 MODEL JAAIVD010000025;XR_004389512 ncrna 625903360 Tbc1d1 TBC1 domain family member 1 INVOLVED IN negative regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); regulation of cilium assembly (ortholog); regulation of protein localization (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH CAKUT (ortholog); genetic disease (ortholog); obesity (ortholog); FOUND IN nucleolus (ortholog) 11 21207378 21393503 + 116912865 MODEL JAAIVD010000006;XM_032917081;XM_032917082;XM_032917083 XP_032772972;XP_032772973;XP_032772974 protein-coding 625903389 LOC116908942 olfactory receptor 1468-like 9 92799378 92800313 + 22301074;30032202 116908942 MODEL JAAIVD010000002;XM_032912400 XP_032768291 protein-coding 625903392 Rrp7a ribosomal RNA processing 7 homolog A INVOLVED IN blastocyst formation (ortholog); cilium disassembly (ortholog); protein localization to nucleolus (ortholog); ASSOCIATED WITH primary autosomal recessive microcephaly 28 (ortholog); FOUND IN centrosome (ortholog); cilium (ortholog); cytoplasm (ortholog) 1 252533855 252541185 - 22301074;30032202 116914375 MODEL JAAIVD010000025;XM_032918582 XP_032774473 ribosomal RNA-processing protein 7 homolog A protein-coding 625903403 LOC116894160 olfactory receptor 2AG2-like 2 104995006 104995956 - 22301074 116894160 MODEL JAAIVD010000001;XM_032895878 XP_032751769 protein-coding 625903406 LOC116888145 40S ribosomal protein S12-like 1 70422783 70423185 + 116888145 MODEL JAAIVD010000025 pseudo 625903407 LOC116902448 uncharacterized LOC116902448 1 116662630 116765420 + 116902448 MODEL JAAIVD010000025;XR_004388076 ncrna 625903411 LOC116889745 uncharacterized LOC116889745 116889745 MODEL JAAIVD010000077 pseudo 625903412 Tut1 terminal uridylyl transferase 1, U6 snRNA-specific ENCODES a protein that exhibits enzyme binding (ortholog); enzyme-substrate adaptor activity (ortholog); mRNA 3'-UTR binding (ortholog); INVOLVED IN co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway (ortholog); histone mRNA catabolic process (ortholog); mRNA 3'-end processing (ortholog); FOUND IN mRNA cleavage and polyadenylation specificity factor complex (ortholog); nuclear speck (ortholog); nucleolus (ortholog) 2 8979588 8990116 - 22301074;30032202 116890910 MODEL JAAIVD010000001;XM_032891538;XM_032891539 XP_032747429;XP_032747430 speckle targeted PIP5K1A-regulated poly(A) polymerase protein-coding 625903427 LOC116897984 ubiquitin-conjugating enzyme E2 D2-like 4 22875355 22875787 + 116897984 MODEL JAAIVD010000003 pseudo 625903428 Atxn2l ataxin 2 like INVOLVED IN mRNA metabolic process (ortholog); ASSOCIATED WITH Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); FOUND IN cytoplasmic stress granule (ortholog); cytosol (ortholog); membrane (ortholog) 2 75419185 75430803 + 22301074;30032202 116891523 MODEL JAAIVD010000001;XM_032892663;XM_032892664;XM_032892665;XM_032892666 XP_032748554;XP_032748555;XP_032748556;XP_032748557 ataxin-2-like protein protein-coding 625903466 LOC116897906 28S ribosomal protein S36, mitochondrial-like 4 33871528 33872143 - 30032202 116897906 MODEL JAAIVD010000003;XM_032899309 XP_032755200 protein-coding 625903470 Usp15 ubiquitin specific peptidase 15 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); cysteine-type endopeptidase activity (ortholog); deubiquitinase activity (ortholog); INVOLVED IN BMP signaling pathway (ortholog); monoubiquitinated protein deubiquitination (ortholog); negative regulation of antifungal innate immune response (ortholog); PARTICIPATES IN mitochondrial autophagy pathway; ASSOCIATED WITH chronic myeloid leukemia (ortholog); diabetic neuropathy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) 1 201512856 201604859 - 22301074 116909629 MODEL JAAIVD010000025;XM_032913272;XM_032913281;XM_032913287;XM_032913296 XP_032769163;XP_032769172;XP_032769178;XP_032769187 ubiquitin carboxyl-terminal hydrolase 15 protein-coding 625903507 LOC116883934 tubulin alpha-8 chain-like 14 4120623 4121968 + 116883934 MODEL JAAIVD010000009 pseudo 625903508 Homer3 homer scaffold protein 3 ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN cellular response to L-glutamate (ortholog); negative regulation of calcineurin-NFAT signaling cascade (ortholog); negative regulation of interleukin-2 production (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Keratoconus 5 (ortholog); Salivary Gland Neoplasms (ortholog); FOUND IN basal part of cell (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) 13 12542705 12553163 + 22301074;30032202 116914545 MODEL JAAIVD010000008;XM_032918877;XM_032918878;XM_032918879;XM_032918880 XP_032774768;XP_032774769;XP_032774770;XP_032774771 homer protein homolog 3 protein-coding 625903530 LOC116904613 histone H2A.V-like 6 28750266 28750779 + 22301074;30032202 116904613 MODEL JAAIVD010000024;XM_032907406 XP_032763297 protein-coding 625903535 LOC116897237 ATP synthase subunit d, mitochondrial-like 1 88671630 88675806 - 116897237 MODEL JAAIVD010000025 pseudo 625903536 Eddm13 epididymal protein 13 2 179855053 179884392 - 116892738 MODEL JAAIVD010000001;XM_032894612 XP_032750503 protein-coding 625903552 LOC116913883 ferritin light chain 1-like 12 17038777 17039169 - 30032202 116913883 MODEL JAAIVD010000007;XM_032918172 XP_032774063 protein-coding 625903555 LOC116911958 activated RNA polymerase II transcriptional coactivator p15-like 11 86251145 86251517 + 116911958 MODEL JAAIVD010000006 pseudo 625903556 LOC116895276 protein transport protein Sec61 subunit gamma-like 3 3767481 3767687 - 22301074;30032202 116895276 MODEL JAAIVD010000012;XM_032896592 XP_032752483 protein-coding 625903559 Dppa4 developmental pluripotency associated 4 INVOLVED IN gene expression (ortholog); lung-associated mesenchyme development (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN nucleus (ortholog) 4 32802660 32809692 + 30032202 116898308 MODEL JAAIVD010000003;XM_032899650 XP_032755541 developmental pluripotency-associated protein 4 protein-coding 625903568 Ogfrl1 opioid growth factor receptor like 1 4 100919343 100933022 + 22301074;30032202 116899254 MODEL JAAIVD010000003;XM_032900862;XM_032900863 XP_032756753;XP_032756754 opioid growth factor receptor-like protein 1 protein-coding 625903581 Tceal5 transcription elongation factor A like 5 X 88199670 88202587 - 116889160 MODEL JAAIVD010000014;XM_032890323;XM_032890324;XM_032890325;XM_032890326 XP_032746214;XP_032746215;XP_032746216;XP_032746217 transcription elongation factor A protein-like 5 protein-coding 625903597 LOC116897461 U7 small nuclear RNA 3 85383592 85383653 + 116897461 MODEL JAAIVD010000012;XR_004387491 snrna 625903600 LOC116897166 uncharacterized LOC116897166 1 35295005 35299853 - 116897166 MODEL JAAIVD010000025;XR_004387400 ncrna 625903605 LOC116894426 keratin-associated protein 20-2-like 2 158855454 158855612 + 116894426 MODEL JAAIVD010000001;XM_032896131 XP_032752022 protein-coding 625903608 Wdr45b WD repeat domain 45B ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); TSC1-TSC2 complex binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); cellular response to starvation (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); Neurodevelopmental Disorder with Spastic Quadriplegia and Brain Abnormalities with or without Seizures (ortholog); FOUND IN cytosol (ortholog); lysosome (ortholog); phagophore assembly site (ortholog) 9 62671272 62702026 + 22301074;30032202 116908770 MODEL JAAIVD010000002;XM_032912134 XP_032768025 WD repeat domain phosphoinositide-interacting protein 3 protein-coding 625903623 LOC116887491 H-2 class I histocompatibility antigen, TLA(B) alpha chain-like 18 9386193 9389264 - 30032202 116887491 MODEL JAAIVD010000013;XM_032889115 XP_032745006 protein-coding 625903631 LOC116893417 vomeronasal type-1 receptor 1-like 2 174591858 174592809 + 116893417 MODEL JAAIVD010000001 pseudo 625903632 Nfkbia NFKB inhibitor alpha ENCODES a protein that exhibits enzyme binding (ortholog); heat shock protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); canonical NF-kappaB signal transduction (ortholog); cellular response to cytokine stimulus (ortholog); PARTICIPATES IN adenosine signaling pathway; ceramide signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); Adenoviridae Infections (ortholog); alcoholic hepatitis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); I-kappaB/NF-kappaB complex (ortholog) 7 68709578 68712822 - 1741294;22301074 116905061 A0A8A1UBB2 MODEL JAAIVD010000026;X63594;XM_032907754 CAA45138;XP_032763645 RL/IF-1 NF-kappa-B inhibitor alpha protein-coding 625903642 Cdk18 cyclin dependent kinase 18 INVOLVED IN positive regulation of myelination (ortholog); FOUND IN mitochondrion (ortholog) 10 3700974 3733931 + 22301074;30032202;9370357 116911291 MODEL AB005541;JAAIVD010000005;XM_032915198;XM_032915199 BAA21472;XP_032771089;XP_032771090 PCTAIRE3 cyclin-dependent kinase 18 protein-coding 625903664 LOC116889992 apolipoprotein L6-like 1 249389630 249394542 + 22301074;30032202 116889992 MODEL JAAIVD010000025;XM_032890781 XP_032746672 protein-coding 625903669 LOC116902482 U6 spliceosomal RNA 5 110442232 110442334 + 116902482 MODEL JAAIVD010000023;XR_004388098 snrna 625903672 Dlst dihydrolipoamide S-succinyltransferase ENCODES a protein that exhibits acyltransferase activity (ortholog); dihydrolipoyllysine-residue glutaryltransferase activity (ortholog); dihydrolipoyllysine-residue succinyltransferase activity (ortholog); INVOLVED IN 2-oxoglutarate decarboxylation to succinyl-CoA (ortholog); 2-oxoglutarate metabolic process (ortholog); succinyl-CoA metabolic process (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; citric acid cycle pathway; fumaric aciduria pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Hereditary Paraganglioma-Pheochromocytoma Syndromes (ortholog); oxoglutarate dehydrogenase deficiency (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 7 99218979 99243735 + 22301074 116905289 MODEL JAAIVD010000026;XM_032908149;XM_032908150 XP_032764040;XP_032764041 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial protein-coding 625903696 Usp37 ubiquitin specific peptidase 37 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); cysteine-type endopeptidase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN G1/S transition of mitotic cell cycle (ortholog); protein deubiquitination (ortholog); protein K11-linked deubiquitination (ortholog); FOUND IN nucleus (ortholog) 4 147887886 147949551 - 22301074 116899501 MODEL JAAIVD010000003;XM_032901345 XP_032757236 ubiquitin carboxyl-terminal hydrolase 37 protein-coding 625903726 Rbbp6 RB binding protein 6, ubiquitin ligase ENCODES a protein that exhibits protein kinase binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN DNA damage response (ortholog); embryonic organ development (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); FOUND IN centrosome (ortholog); nuclear speck (ortholog); protein-containing complex (ortholog) 2 78860021 78892141 - 22301074;30032202 116891551 MODEL JAAIVD010000001;XM_032892718;XM_032892719;XM_032892720;XM_032892721 XP_032748609;XP_032748610;XP_032748611;XP_032748612 E3 ubiquitin-protein ligase RBBP6 protein-coding 625903754 LOC116883736 testin-2 14 77312586 77325231 + 30032202 116883736 MODEL JAAIVD010000009;XM_032884967 XP_032740858 protein-coding 625903766 LOC116911871 U5 spliceosomal RNA 10 70725394 70725509 + 116911871 MODEL JAAIVD010000005;XR_004389385 snrna 625903769 LOC116913914 leucine-rich repeat and IQ domain-containing protein 1-like 1 181430784 181572257 - 22301074 116913914 MODEL JAAIVD010000025;XM_032918212 XP_032774103 protein-coding 625903784 LOC116895700 gem-associated protein 8-like 3 210245558 210246209 + 116895700 MODEL JAAIVD010000012 pseudo 625903785 St3gal5 ST3 beta-galactoside alpha-2,3-sialyltransferase 5 ENCODES a protein that exhibits lactosylceramide alpha-2,3-sialyltransferase activity (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); salt and pepper syndrome (ortholog) 6 75115843 75167798 + 30032202 116903694 MODEL JAAIVD010000024;XM_032906367;XM_032906368;XM_032906369;XM_032906370 XP_032762258;XP_032762259;XP_032762260;XP_032762261 lactosylceramide alpha-2,3-sialyltransferase protein-coding 625903808 LOC116895964 N-alpha-acetyltransferase 11-like 3 145340724 145341380 + 116895964 MODEL JAAIVD010000012 pseudo 625903809 Rcl1 RNA terminal phosphate cyclase like 1 INVOLVED IN endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); psychotic disorder (ortholog); FOUND IN nucleolus (ortholog); small-subunit processome (ortholog) 2 29160064 29203851 + 22301074;30032202 116891071 MODEL JAAIVD010000001;XM_032891776 XP_032747667 RNA 3'-terminal phosphate cyclase-like protein protein-coding 625903822 Trnav-aac transfer RNA valine (anticodon AAC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 31424899 31424971 + 116910787 MODEL JAAIVD010000002 trna 625903823 LOC116889026 ubiquitin carboxyl-terminal hydrolase 27-like X 18193214 18194189 + 116889026 MODEL JAAIVD010000014 pseudo 625903824 Mgst1 microsomal glutathione S-transferase 1 ENCODES a protein that exhibits glutathione binding (ortholog); glutathione peroxidase activity (ortholog); glutathione transferase activity (ortholog); INVOLVED IN cellular response to lipid hydroperoxide (ortholog); glutathione metabolic process (ortholog); glutathione transport (ortholog); ASSOCIATED WITH chronic obstructive pulmonary disease (ortholog); COVID-19 (ortholog); neurodegenerative disease (ortholog); FOUND IN apical part of cell (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 6 11308623 11324047 - 22301074;30032202 116903141 MODEL JAAIVD010000024;XM_032905506 XP_032761397 protein-coding 625903832 LOC116905258 peroxisomal succinyl-coenzyme A thioesterase 7 98123722 98128789 + 22301074;30032202 116905258 MODEL JAAIVD010000026;XM_032908111 XP_032764002 protein-coding 625903839 LOC116911534 coiled-coil domain-containing protein 121-like 10 57106425 57107237 + 116911534 MODEL JAAIVD010000005 pseudo 625903840 Dync1li1 dynein cytoplasmic 1 light intermediate chain 1 ENCODES a protein that exhibits dynein heavy chain binding (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); endocytic recycling (ortholog); microtubule-based movement (ortholog); PARTICIPATES IN mitochondria transport pathway; FOUND IN centrosome (ortholog); cytoplasmic dynein complex (ortholog); endocytic vesicle membrane (ortholog) 8 105290393 105325638 + 30032202 116907824 MODEL JAAIVD010000027;XM_032911005 XP_032766896 cytoplasmic dynein 1 light intermediate chain 1 protein-coding 625903857 Ly6e lymphocyte antigen 6 family member E ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); acetylcholine receptor inhibitor activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); adrenal gland development (ortholog); epinephrine secretion (ortholog); ASSOCIATED WITH Human Influenza (ortholog); pancreatic cancer (ortholog) 1 247707782 247711894 + 30032202 116912576 MODEL JAAIVD010000025;XM_032916695;XM_032916699;XM_032916707 XP_032772586;XP_032772590;XP_032772598 lymphocyte antigen 6E protein-coding 625903870 LOC116892079 2'-deoxynucleoside 5'-phosphate N-hydrolase 1-like 2 151248659 151249229 - 116892079 MODEL JAAIVD010000001 pseudo 625903871 LOC116895591 succinate dehydrogenase assembly factor 4, mitochondrial-like 3 148633419 148633750 - 116895591 MODEL JAAIVD010000012 pseudo 625903872 LOC116885725 vomeronasal type-2 receptor 116-like 16 15726003 15751430 + 22301074;30032202 116885725 MODEL JAAIVD010000004;XM_032887033;XM_032887034;XM_032887035;XM_032887036 XP_032742924;XP_032742925;XP_032742926;XP_032742927 protein-coding 625903888 Glipr2 GLI pathogenesis related 2 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN positive regulation of epithelial cell migration (ortholog); positive regulation of epithelial to mesenchymal transition (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH pancreatic ductal adenocarcinoma (ortholog); FOUND IN Golgi membrane (ortholog) 1 2547727 2566800 - 22301074;30032202 116885773 MODEL JAAIVD010000025;XM_032887098 XP_032742989 Golgi-associated plant pathogenesis-related protein 1 protein-coding 625903897 Spaca7 sperm acrosome associated 7 INVOLVED IN negative regulation of cell adhesion (ortholog); single fertilization (ortholog); FOUND IN acrosomal vesicle (ortholog) 13 71097473 71124086 - 22301074 116915118 MODEL JAAIVD010000008;XM_032919563 XP_032775454 sperm acrosome-associated protein 7 protein-coding 625903907 LOC116913235 olfactory receptor 4Q3-like 12 72888296 72898389 + 22301074 116913235 MODEL JAAIVD010000007;XM_032917401 XP_032773292 protein-coding 625903911 LOC116893987 olfactory receptor 52H1-like 2 101469500 101472974 + 22301074 116893987 MODEL JAAIVD010000001;XM_032895701;XM_032895702 XP_032751592;XP_032751593 protein-coding 625903918 Timm8b translocase of inner mitochondrial membrane 8 homolog B PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; ASSOCIATED WITH COVID-19 (ortholog); FOUND IN mitochondrion (ortholog) 8 45076693 45078109 + 116906845 MODEL JAAIVD010000027;XM_032909740 XP_032765631 mitochondrial import inner membrane translocase subunit Tim8 B protein-coding 625903924 Tmem120a transmembrane protein 120A ENCODES a protein that exhibits coenzyme A binding (ortholog); monoatomic ion channel activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); detection of mechanical stimulus involved in sensory perception of pain (ortholog); fat cell differentiation (ortholog); FOUND IN endoplasmic reticulum (ortholog); nuclear inner membrane (ortholog); plasma membrane (ortholog) 16 18281342 18289829 + 22301074;30032202 116885211 MODEL JAAIVD010000004;XM_032886442 XP_032742333 protein-coding 625903940 Apoc1 apolipoprotein C1 ENCODES a protein that exhibits fatty acid binding (ortholog); lipase inhibitor activity (ortholog); phospholipase inhibitor activity (ortholog); INVOLVED IN cholesterol efflux (ortholog); cholesterol metabolic process (ortholog); chylomicron remnant clearance (ortholog); PARTICIPATES IN altered lipoprotein metabolic pathway; lipoprotein metabolic pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); congestive heart failure (ortholog); Diabetic Nephropathies (ortholog); FOUND IN endoplasmic reticulum (ortholog); high-density lipoprotein particle (ortholog); very-low-density lipoprotein particle (ortholog) 2 170923673 170927490 + 22301074;30032202 116892524 MODEL JAAIVD010000001;XM_032894280 XP_032750171 apolipoprotein C-I protein-coding 625903949 LOC116887731 small nucleolar RNA SNORA17 18 38585356 38585485 + 116887731 MODEL JAAIVD010000013;XR_004386244 snorna 625903952 Sbf1 SET binding factor 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); phosphatase activity (ortholog); protein-membrane adaptor activity (ortholog); INVOLVED IN spermatid development (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease type 4 (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog) 1 258587741 258616104 - 116915032 MODEL JAAIVD010000025;XM_032919441;XM_032919447 XP_032775332;XP_032775338 myotubularin-related protein 5 protein-coding 625903997 LOC116883240 ubiquitin-conjugating enzyme E2 variant 1-like 14 61559011 61559437 + 116883240 MODEL JAAIVD010000009 pseudo 625903998 LOC116905883 60S ribosomal protein L39-like 7 94066132 94066298 + 22301074;30032202 116905883 MODEL JAAIVD010000026;XM_032908873 XP_032764764 protein-coding 625904002 LOC116905424 integral membrane protein DGCR2/IDD-like 7 121428133 121429788 + 22301074;30032202 116905424 MODEL JAAIVD010000026;XM_032908375 XP_032764266 protein-coding 625904005 LOC116889085 serine/arginine-rich splicing factor 10-like X 28146380 28177066 + 116889085 MODEL JAAIVD010000014 pseudo 625904006 Myct1 MYC target 1 INVOLVED IN hematopoietic stem cell homeostasis (ortholog); FOUND IN nucleoplasm (ortholog) 2 197230492 197241589 - 30032202 116894640 MODEL JAAIVD010000001;XM_032896353 XP_032752244 myc target protein 1 protein-coding 625904012 Clic5 chloride intracellular channel 5 ENCODES a protein that exhibits chloride channel activity (ortholog); INVOLVED IN auditory receptor cell stereocilium organization (ortholog); chloride transport (ortholog); diet induced thermogenesis (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 103 (ortholog); Hearing Loss (ortholog); FOUND IN actin cytoskeleton (ortholog); apical plasma membrane (ortholog); Golgi apparatus (ortholog) 4 85592234 85687481 - 116899142 MODEL JAAIVD010000003;XM_032900682 XP_032756573 chloride intracellular channel protein 5 protein-coding 625904022 LOC116912903 uncharacterized LOC116912903 11 90826773 91041671 - 116912903 MODEL JAAIVD010000006;XR_004389488;XR_004389489;XR_004389491 ncrna 625904031 Ptgs1 prostaglandin-endoperoxide synthase 1 ENCODES a protein that exhibits oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (ortholog); peroxidase activity (ortholog); prostaglandin-endoperoxide synthase activity (ortholog); INVOLVED IN cyclooxygenase pathway (ortholog); learning (ortholog); maintenance of blood-brain barrier (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH Abscess (ortholog); Alzheimer's disease (ortholog); Anaphylaxis (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum lumen (ortholog); nuclear envelope (ortholog) 5 13224081 13245665 - 22301074;30032202 116901339 MODEL JAAIVD010000023;XM_032903168 XP_032759059 prostaglandin G/H synthase 1 protein-coding 625904046 LOC116898274 olfactory receptor 12-like 4 164526583 164527554 + 22301074;30032202 116898274 MODEL JAAIVD010000003;XM_032899626 XP_032755517 protein-coding 625904049 LOC116903039 vomeronasal type-1 receptor 90-like 6 159408475 159409374 - 22301074;30032202 116903039 MODEL JAAIVD010000024;XM_032905341 XP_032761232 protein-coding 625904052 LOC116887597 RT1 class I histocompatibility antigen, AA alpha chain-like 18 9300566 9304836 - 116887597 MODEL JAAIVD010000013 pseudo 625904053 LOC116897515 small nucleolar RNA SNORA38 3 142976591 142976710 - 116897515 MODEL JAAIVD010000012;XR_004387533 snorna 625904056 Rpl35 ribosomal protein L35 ENCODES a protein that exhibits ribonucleoprotein complex binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cellular response to UV-B (ortholog); cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Diamond-Blackfan anemia 19 (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosolic large ribosomal subunit (ortholog) 5 16749651 16752584 - 22301074;30032202 116901371 MODEL JAAIVD010000023;XM_032903236 XP_032759127 60S ribosomal protein L35 protein-coding 625904064 LOC116885432 vomeronasal type-2 receptor 116-like 16 2791581 2903592 + 116885432 MODEL JAAIVD010000004 pseudo 625904065 LOC116887682 jupiter microtubule associated homolog 2-like 18 14950049 14950569 + 116887682 MODEL JAAIVD010000013 pseudo 625904066 Stk31 serine/threonine kinase 31 ENCODES a protein that exhibits protein kinase activity (ortholog); INVOLVED IN protein phosphorylation (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog) 6 130992031 131140803 - 22301074 116902970 MODEL JAAIVD010000024;XM_032905289;XM_032905290 XP_032761180;XP_032761181 serine/threonine-protein kinase 31 protein-coding 625904099 LOC116897396 U6 spliceosomal RNA 3 170178381 170178488 - 116897396 MODEL JAAIVD010000012;XR_004387440 snrna 625904102 Cend1 cell cycle exit and neuronal differentiation 1 INVOLVED IN adult walking behavior (ortholog); cerebellar granular layer maturation (ortholog); cerebellar Purkinje cell differentiation (ortholog); FOUND IN mitochondrion (ortholog); vesicle (ortholog) 2 8056436 8059431 + 22301074;30032202 116890871 MODEL JAAIVD010000001;XM_032891452 XP_032747343 cell cycle exit and neuronal differentiation protein 1 protein-coding 625904108 Nupr1 nuclear protein 1, transcriptional regulator ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN acute inflammatory response (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); male gonad development (ortholog); ASSOCIATED WITH diastolic heart failure (ortholog); Experimental Liver Cirrhosis (ortholog); lipid storage disease (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 75285908 75288086 + 30032202 116891518 MODEL JAAIVD010000001;XM_032892656 XP_032748547 nuclear protein 1 protein-coding 625904115 Pcmt1 protein-L-isoaspartate (D-aspartate) O-methyltransferase ENCODES a protein that exhibits protein-L-isoaspartate (D-aspartate) O-methyltransferase activity (ortholog); S-adenosylmethionine-dependent methyltransferase activity (ortholog); S-methyltransferase activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); cellular response to pH (ortholog); negative regulation of cardiac muscle cell apoptotic process (ortholog); PARTICIPATES IN homocysteine metabolic pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Aortic Injuries (ortholog); congestive heart failure (ortholog); FOUND IN basolateral plasma membrane (ortholog); brush border membrane (ortholog); cytosol (ortholog) 2 229364327 229412691 + 22301074;30032202 116893042 MODEL JAAIVD010000001;XM_032895006;XM_032895007;XM_032895008;XM_032895009;XM_032895010 XP_032750897;XP_032750898;XP_032750899;XP_032750900;XP_032750901 protein-L-isoaspartate(D-aspartate) O-methyltransferase protein-coding 625904143 LOC116904049 protein SDA1 homolog 6 117673628 117676472 - 116904049 MODEL JAAIVD010000024 pseudo 625904144 LOC116894185 olfactory receptor 476 2 105997103 105998035 + 22301074;30032202 116894185 MODEL JAAIVD010000001;XM_032895900 XP_032751791 protein-coding 625904147 LOC116898155 uncharacterized LOC116898155 4 118068441 118080748 + 116898155 MODEL JAAIVD010000003;XR_004387639 ncrna 625904153 LOC116908758 mitochondrial import receptor subunit TOM7 homolog 9 50151301 50151489 - 22301074 116908758 MODEL JAAIVD010000002;XM_032912109 XP_032768000 protein-coding 625904157 LOC116896517 histone H2B type 2-E 3 61062445 61065135 - 22301074;30032202 116896517 MODEL JAAIVD010000012;XM_032897699 XP_032753590 protein-coding 625904162 Thumpd2 THUMP domain 2 tRNA and snRNA guanosine methyltransferase ENCODES a protein that exhibits U6 snRNA (guanine-N(2))-methyltransferase activity (ortholog); INVOLVED IN regulation of alternative mRNA splicing, via spliceosome (ortholog); FOUND IN nucleus (ortholog); tRNA methyltransferase complex (ortholog) 7 11984671 12023010 + 30032202 116905835 MODEL JAAIVD010000026;XM_032908809 XP_032764700 THUMP domain containing 2;THUMP domain-containing protein 2 protein-coding 625904176 LOC116887824 high mobility group protein B4-like X 35589298 35589804 + 30032202 116887824 MODEL JAAIVD010000014;XM_032889342 XP_032745233 protein-coding 625904179 LOC116912650 CWF19-like protein 1 11 5215172 5216808 + 116912650 MODEL JAAIVD010000006 pseudo 625904180 LOC116893370 inactive serine/threonine-protein kinase TEX14-like 2 165489037 165490850 - 22301074;30032202 116893370 MODEL JAAIVD010000001;XM_032895170 XP_032751061 protein-coding 625904191 LOC116884364 vegetative cell wall protein gp1-like 15 40525983 40526777 - 116884364 MODEL JAAIVD010000010;XM_032885488 XP_032741379 protein-coding 625904195 LOC116898581 ubiquitin-associated domain-containing protein 1-like 4 165234802 165235877 + 116898581 MODEL JAAIVD010000003 pseudo 625904196 Stambpl1 STAM binding protein like 1 ENCODES a protein that exhibits K63-linked deubiquitinase activity (ortholog); INVOLVED IN cellular response to L-leucine (ortholog); positive regulation of TORC1 signaling (ortholog) 2 33816802 33835904 + 22301074;30032202 116891100 MODEL JAAIVD010000001;XM_032891813 XP_032747704 AMSH-like protease protein-coding 625904210 Sod1 superoxide dismutase 1 ENCODES a protein that exhibits copper ion binding (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN action potential initiation (ortholog); anterograde axonal transport (ortholog); auditory receptor cell stereocilium organization (ortholog); PARTICIPATES IN amyotrophic lateral sclerosis pathway; forkhead class A signaling pathway; hypertension pathway; ASSOCIATED WITH acute kidney failure (ortholog); alcohol use disorder (ortholog); alcohol-associated liver disease (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) 4 54366632 54372166 - 30032202 116899012 MODEL JAAIVD010000003;XM_032900460 XP_032756351 superoxide dismutase [Cu-Zn] protein-coding 625904219 LOC116911863 U2 spliceosomal RNA 10 51464723 51464901 + 116911863 MODEL JAAIVD010000005 pseudo 625904220 LOC116914820 double homeobox protein B-like 13 2115356 2121933 + 22301074 116914820 MODEL JAAIVD010000008;XM_032919277 XP_032775168 protein-coding 625904229 Uba7 ubiquitin like modifier activating enzyme 7 ENCODES a protein that exhibits ISG15 activating enzyme activity (ortholog); INVOLVED IN innate immune response (ortholog); ISG15-protein conjugation (ortholog); modification-dependent protein catabolic process (ortholog); ASSOCIATED WITH intellectual disability (ortholog); squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog) 8 99307149 99315745 + 30032202 116907701 MODEL JAAIVD010000027;XM_032910824 XP_032766715 ubiquitin-like modifier-activating enzyme 7 protein-coding 625904257 Ccdc159 coiled-coil domain containing 159 INVOLVED IN gene expression (ortholog); regulation of phosphatase activity (ortholog); single fertilization (ortholog); ASSOCIATED WITH male infertility due to acephalic spermatozoa (ortholog); FOUND IN sperm head-tail coupling apparatus (ortholog) 8 18177990 18186681 + 116906573 MODEL JAAIVD010000027;XM_032909294;XM_032909295;XM_032909296;XM_032909297;XM_032909298;XM_032909299;XM_032909300 XP_032765185;XP_032765186;XP_032765187;XP_032765188;XP_032765189;XP_032765190;XP_032765191 coiled-coil domain-containing protein 159 protein-coding 625904287 Mcm4 minichromosome maintenance complex component 4 ENCODES a protein that exhibits DNA helicase activity (ortholog); single-stranded DNA binding (ortholog); INVOLVED IN DNA replication (ortholog); ASSOCIATED WITH immunodeficiency 54 (ortholog); microcephaly (ortholog); FOUND IN MCM complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 4 971842 985937 - 22301074;30032202 116898604 MODEL JAAIVD010000003;XM_032899801 XP_032755692 DNA replication licensing factor MCM4 protein-coding 625904307 LOC116887583 protein kish-A-like 18 6912165 6912886 + 30032202 116887583 MODEL JAAIVD010000013;XM_032889208 XP_032745099 protein-coding 625904311 LOC116904316 protein aurora borealis-like 6 60125291 60177309 - 116904316 MODEL JAAIVD010000024 pseudo 625904312 Ecel1 endothelin converting enzyme like 1 ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); INVOLVED IN intracellular signal transduction (ortholog); neuropeptide signaling pathway (ortholog); respiratory system process (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); distal arthrogryposis (ortholog); distal arthrogryposis type 5D (ortholog) 4 159274753 159282127 - 22301074;30032202 116899601 MODEL JAAIVD010000003;XM_032901547 XP_032757438 endothelin-converting enzyme-like 1 protein-coding 625904333 LOC116906059 heterogeneous nuclear ribonucleoprotein A1-like 7 49639904 49640830 + 116906059 MODEL JAAIVD010000026 pseudo 625904334 LOC116904436 60S ribosomal protein L7a-like 6 118622784 118623525 - 116904436 MODEL JAAIVD010000024 pseudo 625904335 C8H15orf61 chromosome 8 C15orf61 homolog FOUND IN mitochondrion (ortholog) 8 57690587 57695224 - 116907349 MODEL JAAIVD010000027;XM_032910281 XP_032766172 uncharacterized protein C15orf61 homolog protein-coding 625904341 LOC116906095 acyl-protein thioesterase 1-like 7 73232264 73236824 - 116906095 MODEL JAAIVD010000026 pseudo 625904342 Rxra retinoid X receptor alpha ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA binding (ortholog); DNA binding domain binding (ortholog); INVOLVED IN axon regeneration (ortholog); camera-type eye development (ortholog); cardiac muscle cell proliferation (ortholog); PARTICIPATES IN retinoic acid signaling pathway; ASSOCIATED WITH alcoholic cardiomyopathy (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); congenital heart disease (ortholog); FOUND IN axon (ortholog); chromatin (ortholog); nucleoplasm (ortholog) 5 8911230 8937236 - 22301074;30032202 116901236 MODEL JAAIVD010000023;XM_032902981 XP_032758872 retinoic acid receptor RXR-alpha protein-coding 625904355 Sfrp4 secreted frizzled related protein 4 ENCODES a protein that exhibits Wnt-protein binding (ortholog); INVOLVED IN bone morphogenesis (ortholog); decidualization (ortholog); female pregnancy (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); Experimental Arthritis (ortholog); genetic disease (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular region (ortholog) 14 38362223 38455452 + 30032202 116883853 MODEL JAAIVD010000009;XM_032885117;XM_032885119;XM_032885120 XP_032741008;XP_032741010;XP_032741011 secreted frizzled-related protein 4 protein-coding 625904373 LOC116891412 vomeronasal type-1 receptor 2-like 2 70704986 70705941 - 116891412 MODEL JAAIVD010000001 pseudo 625904374 Misp3 MISP family member 3 17 16272782 16274765 + 116886530 MODEL JAAIVD010000011;XM_032888050;XM_032888051 XP_032743941;XP_032743942 uncharacterized protein MISP3 protein-coding 625904386 Ppil4 peptidylprolyl isomerase like 4 FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 2 229214888 229247194 - 22301074;30032202 116893035 MODEL JAAIVD010000001;XM_032894999 XP_032750890 peptidyl-prolyl cis-trans isomerase-like 4 protein-coding 625904403 Gck glucokinase ENCODES a protein that exhibits ADP binding (ortholog); ATP binding (ortholog); D-glucose binding (ortholog); INVOLVED IN calcium ion import (ortholog); carbohydrate phosphorylation (ortholog); cellular response to glucose starvation (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; forkhead class A signaling pathway; galactokinase deficiency pathway; ASSOCIATED WITH Bone Marrow Failure Syndrome 2 (ortholog); Congenital Hyperinsulinism (ortholog); coronary artery disease (ortholog); FOUND IN actin filament (ortholog); basal cortex (ortholog); cell cortex (ortholog) 11 74858481 74899279 - 22301074;30032202 116912319 MODEL JAAIVD010000006;XM_032916344 XP_032772235 hexokinase-4 protein-coding 625904417 Tmem37 transmembrane protein 37 ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog) 10 12638080 12644829 - 22301074;30032202 116911219 MODEL JAAIVD010000005;XM_032915111 XP_032771002 voltage-dependent calcium channel gamma-like subunit protein-coding 625904423 LOC116891294 heterogeneous nuclear ribonucleoprotein A3-like 2 54591644 54592796 - 116891294 MODEL JAAIVD010000001 pseudo 625904424 LOC116907304 small ubiquitin-related modifier 2-like 8 26747878 26748191 - 116907304 MODEL JAAIVD010000027 pseudo 625904425 LOC116895930 60S ribosomal protein L24-like 3 125203348 125205310 + 116895930 MODEL JAAIVD010000012 pseudo 625904426 LOC116897223 replication protein A 14 kDa subunit-like 3 193036589 193036956 + 116897223 MODEL JAAIVD010000012 pseudo 625904427 Clec16a C-type lectin domain containing 16A INVOLVED IN cellular response to starvation (ortholog); mitophagy (ortholog); negative regulation of autophagosome maturation (ortholog); ASSOCIATED WITH Addison's disease (ortholog); allergic rhinitis (ortholog); asthma (ortholog); FOUND IN cytosol (ortholog); endolysosome membrane (ortholog); Golgi apparatus (ortholog) 9 11614574 11805687 - 30032202 116909976 MODEL JAAIVD010000002;XM_032913755;XM_032913756;XM_032913757 XP_032769646;XP_032769647;XP_032769648 protein CLEC16A protein-coding 625904460 Ndufaf4 NADH:ubiquinone oxidoreductase complex assembly factor 4 INVOLVED IN defense response to virus (ortholog); mitochondrial respiratory chain complex I assembly (ortholog); NADH dehydrogenase complex assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); mitochondrial complex I deficiency (ortholog); nuclear type mitochondrial complex I deficiency 1 (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) 1 118569849 118574978 - 22301074;30032202 116902726 MODEL JAAIVD010000025;XM_032905080 XP_032760971 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4 protein-coding 625904467 LOC116890479 olfactory receptor 10AD1-like 1 271020118 271022712 - 22301074 116890479 MODEL JAAIVD010000025;XM_032891009 XP_032746900 protein-coding 625904471 Fndc9 fibronectin type III domain containing 9 9 28949568 28954312 + 22301074 116910025 MODEL JAAIVD010000002;XM_032913808 XP_032769699 fibronectin type III domain-containing protein 9 protein-coding 625904477 LOC116883480 40S ribosomal protein S19-like 14 1943272 1943747 + 22301074;30032202 116883480 MODEL JAAIVD010000009;XM_032884635;XM_032884636 XP_032740526;XP_032740527 protein-coding 625904484 LOC116894032 olfactory receptor 51G2-like 2 102093837 102094790 + 22301074 116894032 MODEL JAAIVD010000001;XM_032895750 XP_032751641 protein-coding 625904487 LOC116905297 uncharacterized LOC116905297 7 99534883 99538410 + 116905297 MODEL JAAIVD010000026;XR_004388512 ncrna 625904492 LOC116911286 macrophage migration inhibitory factor-like 10 50692681 50693202 - 30032202 116911286 MODEL JAAIVD010000005;XM_032915193 XP_032771084 protein-coding 625904497 Crb3 crumbs cell polarity complex component 3 ENCODES a protein that exhibits protein domain specific binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN positive regulation of cell junction assembly (ortholog); protein localization to plasma membrane (ortholog); tight junction organization (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); cell junction (ortholog) 4 88440620 88444128 + 116899211 MODEL JAAIVD010000003;XM_032900803;XM_032900804;XM_032900805 XP_032756694;XP_032756695;XP_032756696 protein crumbs homolog 3 protein-coding 625904512 LOC116895427 uncharacterized LOC116895427 3 65363278 65364517 + 116895427 MODEL JAAIVD010000012;XR_004387275 ncrna 625904516 LOC116903052 acidic proline-rich protein PRP33-like 6 16228716 16230865 + 116903052 MODEL JAAIVD010000024;XM_032905352 XP_032761243 protein-coding 625904523 LOC116885913 elastin-like 16 19334735 19340641 + 30032202 116885913 MODEL JAAIVD010000004;XM_032887228 XP_032743119 protein-coding 625904533 Coq9 coenzyme Q9 ENCODES a protein that exhibits enzyme activator activity (ortholog); isoprenoid binding (ortholog); lipid binding (ortholog); INVOLVED IN mitochondrial electron transport, NADH to ubiquinone (ortholog); ubiquinone biosynthetic process (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); coenzyme Q10 deficiency disease (ortholog); genetic disease (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 17 1718468 1731647 + 22301074;30032202 116886289 MODEL JAAIVD010000011;XM_032887720;XM_032887721 XP_032743611;XP_032743612 ubiquinone biosynthesis protein COQ9, mitochondrial protein-coding 625904551 LOC116897002 succinyl-CoA:3-ketoacid coenzyme A transferase 2A, mitochondrial-like 1 34939187 34941067 + 22301074;30032202 116897002 MODEL JAAIVD010000025;XM_032898610 XP_032754501 protein-coding 625904556 LOC116902501 U6 spliceosomal RNA 5 56580683 56580784 + 116902501 MODEL JAAIVD010000023;XR_004388114 snrna 625904559 LOC116891016 alpha-enolase-like 2 18660587 18661954 + 116891016 MODEL JAAIVD010000001 pseudo 625904560 Kctd19 potassium channel tetramerization domain containing 19 INVOLVED IN male meiotic nuclear division (ortholog); ASSOCIATED WITH Cerebral Visual Impairment and Intellectual Disability (ortholog); FOUND IN nucleus (ortholog) 17 25108151 25140142 - 22301074 116886656 MODEL JAAIVD010000011;XM_032888151 XP_032744042 BTB/POZ domain-containing protein KCTD19 protein-coding 625904579 LOC116888543 refilin-B-like X 2617229 2617939 - 116888543 MODEL JAAIVD010000014 pseudo 625904580 Vwa2 von Willebrand factor A domain containing 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN calcium-independent cell-matrix adhesion (ortholog); regulation of insulin receptor signaling pathway (ortholog); FOUND IN basement membrane (ortholog); extracellular region (ortholog) 2 59250285 59282456 - 22301074 116893091 MODEL JAAIVD010000001;XM_032895035 XP_032750926 von Willebrand factor A domain-containing protein 2 protein-coding 625904596 LOC116900957 aldo-keto reductase family 1 member B1-like 5 96635104 96636260 - 116900957 MODEL JAAIVD010000023 pseudo 625904597 Zfhx3 zinc finger homeobox 3 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); enzyme binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); negative regulation of myoblast differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); autism spectrum disorder (ortholog); autoimmune hepatitis (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 17 28429783 28671816 + 22301074;30032202 116886158 MODEL JAAIVD010000011;XM_032887527 XP_032743418 zinc finger homeobox protein 3 protein-coding 625904611 Gak cyclin G associated kinase ENCODES a protein that exhibits cyclin binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cell development (ortholog); clathrin coat assembly (ortholog); clathrin coat disassembly (ortholog); ASSOCIATED WITH Parkinson's disease (ortholog); FOUND IN clathrin-coated vesicle (ortholog); Golgi apparatus (ortholog); vesicle (ortholog) 11 18350869 18415409 - 22301074;30032202 116912168 MODEL JAAIVD010000006;XM_032916092;XM_032916093;XM_032916094 XP_032771983;XP_032771984;XP_032771985 cyclin-G-associated kinase protein-coding 625904646 LOC116884483 signal recognition particle 19 kDa protein-like 15 10008085 10008956 - 116884483 MODEL JAAIVD010000010 pseudo 625904647 LOC116906450 small nucleolar RNA SNORA17 7 52848149 52848272 + 116906450 MODEL JAAIVD010000026 pseudo 625904648 LOC116893441 ornithine decarboxylase-like 2 176697072 176708519 + 116893441 MODEL JAAIVD010000001 pseudo 625904649 LOC116894378 olfactory receptor 13A1-like 2 156701888 156702835 + 22301074 116894378 MODEL JAAIVD010000001;XM_032896087 XP_032751978 protein-coding 625904652 LOC116899742 U6 spliceosomal RNA 4 70700787 70700893 - 116899742 MODEL JAAIVD010000003;XR_004387758 snrna 625904655 Col1a2 collagen type I alpha 2 chain ENCODES a protein that exhibits identical protein binding (ortholog); platelet-derived growth factor binding (ortholog); protease binding (ortholog); INVOLVED IN blood vessel development (ortholog); bone mineralization (ortholog); cellular response to aldehyde (ortholog); PARTICIPATES IN endothelin signaling pathway; interleukin-4 signaling pathway; syndecan signaling pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); ARTERIAL DISSECTION (ortholog); Bruck Syndrome 1 (ortholog); FOUND IN collagen trimer (ortholog); collagen type I trimer (ortholog); endoplasmic reticulum (ortholog) 6 134076181 134111086 - 22301074 116904104 MODEL JAAIVD010000024;XM_032906976 XP_032762867 collagen alpha-2(I) chain protein-coding 625904711 Pou2af1 POU class 2 homeobox associating factor 1 ENCODES a protein that exhibits DNA binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN cellular response to virus (ortholog); germinal center B cell differentiation (ortholog); positive regulation of interleukin-6 production (ortholog); FOUND IN RNA polymerase II transcription regulator complex (ortholog) 8 45646792 45673707 + 22301074;30032202 116907352 MODEL JAAIVD010000027;XM_032910284;XM_032910285 XP_032766175;XP_032766176 POU domain class 2-associating factor 1 protein-coding 625904724 Agbl1 AGBL carboxypeptidase 1 ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); tubulin binding (ortholog); INVOLVED IN C-terminal protein deglutamylation (ortholog); protein side chain deglutamylation (ortholog); ASSOCIATED WITH Corneal Dystrophy, Fuchs Endothelial, 8 (ortholog); Fuchs' endothelial dystrophy (ortholog) 2 124023091 124461913 + 22301074;30032202 116893238 MODEL JAAIVD010000001;XM_032895109 XP_032751000 ATP/GTP binding protein like 1;cytosolic carboxypeptidase 4 protein-coding 625904744 Ubl7 ubiquitin like 7 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog) 8 51782827 51802017 + 30032202 116906849 MODEL JAAIVD010000027;XM_032909743;XM_032909744 XP_032765634;XP_032765635 ubiquitin-like protein 7 protein-coding 625904762 LOC116895640 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4-like 3 177105986 177106837 + 116895640 MODEL JAAIVD010000012 pseudo 625904763 LOC116897960 phosphoglycerate kinase 1-like 4 45839413 45840621 - 116897960 MODEL JAAIVD010000003 pseudo 625904764 Ppwd1 peptidylprolyl isomerase domain and WD repeat containing 1 ENCODES a protein that exhibits peptidyl-prolyl cis-trans isomerase activity (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear body (ortholog) 3 193134554 193158867 + 22301074;30032202 116897228 MODEL JAAIVD010000012;XM_032898948;XM_032898949 XP_032754839;XP_032754840 peptidylprolyl isomerase domain and WD repeat-containing protein 1 protein-coding 625904783 Cd63 CD63 molecule ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN cell migration (ortholog); cell-matrix adhesion (ortholog); endosome to melanosome transport (ortholog); ASSOCIATED WITH carotid artery disease (ortholog); diabetic neuropathy (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cell surface (ortholog); endosome lumen (ortholog); endosome membrane (ortholog) 1 156386648 156389956 + 22301074;30032202 116906585 MODEL JAAIVD010000025;XM_032909328;XM_032909334;XM_032909342 XP_032765219;XP_032765225;XP_032765233 CD63 antigen protein-coding 625904801 LOC116894175 olfactory receptor 2D3 2 105271735 105272679 + 22301074 116894175 MODEL JAAIVD010000001;XM_032895891 XP_032751782 protein-coding 625904804 Rln3 relaxin 3 ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); ASSOCIATED WITH Hyperplasia (ortholog); Myocardial Ischemia (ortholog) 17 16239046 16241510 + 22301074 116886404 MODEL JAAIVD010000011;XM_032887875 XP_032743766 relaxin-3 protein-coding 625904810 LOC116898486 high mobility group protein B1-like 4 120315959 120316439 + 116898486 MODEL JAAIVD010000003;XM_032899732 XP_032755623 protein-coding 625904814 Kif14 kinesin family member 14 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); microtubule binding (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); cell division (ortholog); cell proliferation in forebrain (ortholog); ASSOCIATED WITH COVID-19 (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); microtubule (ortholog); midbody (ortholog) 10 16801045 16823367 - 22301074 116911762 MODEL JAAIVD010000005;XM_032915755 XP_032771646 kinesin-like protein KIF14 protein-coding 625904831 Dorip1 dopamine receptor interacting protein 1 7 78621048 78629507 + 116905100 MODEL JAAIVD010000026;XM_032907827;XM_032907828 XP_032763718;XP_032763719 C7H14orf28 chromosome 7 C14orf28 homolog;uncharacterized protein C14orf28 homolog protein-coding 625904844 LOC116914394 NADH-cytochrome b5 reductase 3 ENCODES a protein that exhibits ADP binding (ortholog); AMP binding (ortholog); cytochrome-b5 reductase activity, acting on NAD(P)H (ortholog); INVOLVED IN nitric oxide biosynthetic process (ortholog); ASSOCIATED WITH breast cancer (ortholog); Congenital Methemoglobinemia (ortholog); congenital myopathy 1A (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 1 252575716 252597835 - 22301074;30032202 116914394 MODEL JAAIVD010000025;XM_032918617;XM_032918626;XM_032918634 XP_032774508;XP_032774517;XP_032774525 protein-coding 625904864 Il17ra interleukin 17 receptor A ENCODES a protein that exhibits interleukin-17 receptor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN cellular response to cytokine stimulus (ortholog); defense response to fungus (ortholog); fibroblast activation (ortholog); ASSOCIATED WITH brain ischemia (ortholog); chronic mucocutaneous candidiasis (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN plasma membrane (ortholog) 6 26268742 26290697 - 30032202 116903330 MODEL JAAIVD010000024;XM_032905775;XM_032905776 XP_032761666;XP_032761667 interleukin-17 receptor A protein-coding 625904884 Arpc5l actin related protein 2/3 complex subunit 5 like INVOLVED IN Arp2/3 complex-mediated actin nucleation (ortholog); FOUND IN glutamatergic synapse (ortholog); synapse (ortholog) 5 16756184 16763955 + 22301074;30032202 116901372 MODEL JAAIVD010000023;XM_032903237 XP_032759128 actin-related protein 2/3 complex subunit 5-like protein protein-coding 625904892 KEG97_t05 tRNA-Gln MT 3759 3829 - 64988239 trna 625904893 Kdelr1 KDEL endoplasmic reticulum protein retention receptor 1 ENCODES a protein that exhibits KDEL sequence binding (ortholog); INVOLVED IN retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); T cell apoptotic process (ortholog); T cell differentiation (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cis-Golgi network (ortholog); COPI-coated vesicle membrane (ortholog); endoplasmic reticulum (ortholog) 2 153634507 153645766 - 22301074;30032202 116892119 MODEL JAAIVD010000001;XM_032893600 XP_032749491 ER lumen protein-retaining receptor 1 protein-coding 625904902 Pxt1 peroxisomal testis enriched protein 1 INVOLVED IN positive regulation of apoptotic process (ortholog); spermatogenesis (ortholog); FOUND IN nucleus (ortholog); peroxisome (ortholog) 18 4917894 4924056 + 30032202 116887573 MODEL JAAIVD010000013;XM_032889193 XP_032745084 peroxisomal testis-specific protein 1 protein-coding 625904910 LOC116892106 mas-related G-protein coupled receptor member B4 2 153009951 153011021 - 22301074;30032202 116892106 MODEL JAAIVD010000001;XM_032893583 XP_032749474 protein-coding 625904913 LOC116904781 small nucleolar RNA SNORA76 6 31453656 31453734 + 116904781 MODEL JAAIVD010000024;XR_004388445 snorna 625904916 Slc49a3 solute carrier family 49 member 3 11 18219407 18227029 - 22301074;30032202 116912561 MODEL JAAIVD010000006;XM_032916664 XP_032772555 solute carrier family 49 member A3 protein-coding 625904930 Trnag-ccc transfer RNA glycine (anticodon CCC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60876707 60876777 + 116897667 MODEL JAAIVD010000012 trna 625904931 LOC116906522 U6 spliceosomal RNA 7 8465082 8465188 - 116906522 MODEL JAAIVD010000026;XR_004388744 snrna 625904934 LOC116891186 cytochrome P450 2B1-like 2 42733387 42756012 + 22301074;30032202 116891186 MODEL JAAIVD010000001;XM_032892004 XP_032747895 protein-coding 625904947 LOC116910673 Z30 small nucleolar RNA 9 87388906 87389001 - 116910673 MODEL JAAIVD010000002;XR_004389205 snorna 625904950 Lgals8 galectin 8 ENCODES a protein that exhibits carbohydrate binding (ortholog); integrin binding (ortholog); INVOLVED IN cellular response to virus (ortholog); lymphatic endothelial cell migration (ortholog); plasma cell differentiation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 14 26185383 26209949 - 22301074 116884050 MODEL JAAIVD010000009;XM_032885296;XM_032885297;XM_032885298 XP_032741187;XP_032741188;XP_032741189 galectin-8 protein-coding 625904972 Ipo11 importin 11 ENCODES a protein that exhibits nuclear import signal receptor activity (ortholog); INVOLVED IN ribosomal protein import into nucleus (ortholog); ASSOCIATED WITH hydrocephalus (ortholog); Weight Gain (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 3 190676930 190844324 + 22301074;30032202 116897216 MODEL JAAIVD010000012;XM_032898933;XM_032898934 XP_032754824;XP_032754825 importin-11 protein-coding 625905008 LOC116883941 small nuclear ribonucleoprotein E-like 14 13699769 13703489 + 22301074;30032202 116883941 MODEL JAAIVD010000009;XM_032885190 XP_032741081 protein-coding 625905013 LOC116905473 uncharacterized LOC116905473 7 128044490 128046189 - 116905473 MODEL JAAIVD010000026;XR_004388543 ncrna 625905017 Rabl6 RAB, member RAS oncogene family like 6 ENCODES a protein that exhibits GTP binding (ortholog); ASSOCIATED WITH intellectual disability (ortholog); Meniere's disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 5 11570226 11595956 + 30032202 116901287 MODEL JAAIVD010000023;XM_032903076 XP_032758967 rab-like protein 6 protein-coding 625905036 Clec11a C-type lectin domain containing 11A ENCODES a protein that exhibits growth factor activity (ortholog); INVOLVED IN positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH anemia (ortholog); carotid stenosis (ortholog); malignant mesothelioma (ortholog); FOUND IN extracellular region (ortholog) 2 155222074 155226394 + 9705843 116892217 MODEL AB009246;JAAIVD010000001;XM_032893777;XM_032893778 BAA32406;XP_032749668;XP_032749669 SCGF C-type lectin domain family 11 member A;Stem cell growth factor protein-coding 625905046 Wnt7a Wnt family member 7A ENCODES a protein that exhibits cytokine activity (ortholog); frizzled binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN angiogenesis (ortholog); asymmetric protein localization involved in cell fate determination (ortholog); canonical Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; Wnt signaling, non-canonical pathway; ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN cell surface (ortholog); extracellular matrix (ortholog); glutamatergic synapse (ortholog) 6 55530662 55577249 + 22301074;30032202 116903502 MODEL JAAIVD010000024;XM_032906098;XM_032906099 XP_032761989;XP_032761990 protein Wnt-7a protein-coding 625905057 LOC116888124 intraflagellar transport protein 52 homolog X 103531393 103537535 - 116888124 MODEL JAAIVD010000014 pseudo 625905058 LOC116911612 actin-related protein 2/3 complex subunit 1B-like 10 26829122 26830374 - 116911612 MODEL JAAIVD010000005 pseudo 625905059 LOC116912918 prefoldin subunit 4-like 11 72579718 72580125 + 116912918 MODEL JAAIVD010000006 pseudo 625905060 LOC116897040 U1 small nuclear ribonucleoprotein C-like 3 146694837 146695953 - 116897040 MODEL JAAIVD010000012 pseudo 625905061 LOC116895029 small nucleolar RNA SNORA17 2 77743350 77743483 - 116895029 MODEL JAAIVD010000001;XR_004387215 snorna 625905064 LOC116905718 epidermal retinol dehydrogenase 2 7 72690473 72712419 + 30032202 116905718 MODEL JAAIVD010000026;XM_032908688 XP_032764579 protein-coding 625905074 LOC116909803 cytochrome c, somatic-like 9 33658296 33658947 - 22301074;30032202 116909803 MODEL JAAIVD010000002;XM_032913498 XP_032769389 protein-coding 625905078 LOC116912033 coiled-coil domain-containing protein 201-like 11 76092158 76096505 - 116912033 MODEL JAAIVD010000006;XM_032915917 XP_032771808 protein-coding 625905083 LOC116908378 small nucleolar RNA SNORA48 8 28056841 28056978 - 116908378 MODEL JAAIVD010000027;XR_004388925 snorna 625905086 LOC116891807 olfactory receptor 51D1 2 102626306 102646112 + 22301074 116891807 MODEL JAAIVD010000001;XM_032893163 XP_032749054 protein-coding 625905091 LOC116901015 pre-mRNA-splicing factor CWC22 homolog 5 124410757 124411256 + 116901015 MODEL JAAIVD010000023 pseudo 625905092 LOC116898125 uncharacterized LOC116898125 4 107718046 107729481 - 116898125 MODEL JAAIVD010000003;XR_004387636 ncrna 625905096 LOC116884877 protein SET-like 15 9936165 9937151 + 116884877 MODEL JAAIVD010000010 pseudo 625905097 Lrch1 leucine rich repeats and calponin homology domain containing 1 INVOLVED IN cellular response to chemokine (ortholog); negative regulation of GTPase activity (ortholog); negative regulation of T cell migration (ortholog); ASSOCIATED WITH multiple sclerosis (ortholog); stroke (ortholog); FOUND IN cytoplasm (ortholog) 12 49449487 49626524 + 22301074 116914006 MODEL JAAIVD010000007;XM_032918278;XM_032918279 XP_032774169;XP_032774170 leucine-rich repeat and calponin homology domain-containing protein 1 protein-coding 625905124 Znf12 zinc finger protein 12 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 16 9898582 9912562 - 22301074;30032202 116885142 MODEL JAAIVD010000004;XM_032886330;XM_032886331 XP_032742221;XP_032742222 protein-coding 625905134 LOC116894701 cofilin-1-like 2 223553137 223553633 + 116894701 MODEL JAAIVD010000001 pseudo 625905135 Golm1 golgi membrane protein 1 INVOLVED IN nucleus organization (ortholog); regulation of lipid metabolic process (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); COVID-19 (ortholog); hepatitis (ortholog); FOUND IN Golgi apparatus (ortholog) 14 78454978 78494084 + 30032202 116883804 MODEL JAAIVD010000009;XM_032885051 XP_032740942 protein-coding 625905149 LOC116889047 xanthine dehydrogenase/oxidase-like X 21396681 21411920 + 116889047 MODEL JAAIVD010000014 pseudo 625905150 Obsl1 obscurin like cytoskeletal adaptor 1 INVOLVED IN Golgi organization (ortholog); microtubule cytoskeleton organization (ortholog); positive regulation of dendrite morphogenesis (ortholog); ASSOCIATED WITH 3-M syndrome (ortholog); Dwarfism (ortholog); genetic disease (ortholog); FOUND IN 3M complex (ortholog); centrosome (ortholog); cytoplasm (ortholog) 4 148836782 148855051 - 22301074 116899539 MODEL JAAIVD010000003;XM_032901418;XM_032901419;XM_032901420 XP_032757309;XP_032757310;XP_032757311 obscurin-like protein 1 protein-coding 625905178 LOC116907788 uncharacterized LOC116907788 8 30751366 30758464 + 116907788 MODEL JAAIVD010000027;XR_004388845 ncrna 625905183 Prkar1a protein kinase cAMP-dependent type I regulatory subunit alpha ENCODES a protein that exhibits cAMP binding (ortholog); cAMP-dependent protein kinase inhibitor activity (ortholog); cAMP-dependent protein kinase regulator activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cardiac muscle cell proliferation (ortholog); cellular response to glucagon stimulus (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH acrodysostosis (ortholog); Acrodysostosis 1, with or without Hormone Resistance (ortholog); acute promyelocytic leukemia (ortholog); FOUND IN axoneme (ortholog); cAMP-dependent protein kinase complex (ortholog); centrosome (ortholog) 9 69477329 69496563 - 116909128 MODEL JAAIVD010000002;XM_032912607;XM_032912608 XP_032768498;XP_032768499 cAMP-dependent protein kinase type I-alpha regulatory subunit protein-coding 625905201 LOC116900487 olfactory receptor 4X2-like 5 71695106 71696035 - 22301074 116900487 MODEL JAAIVD010000023;XM_032902222 XP_032758113 protein-coding 625905204 Angptl5 angiopoietin like 5 8 3549957 3566615 - 30032202 116907193 MODEL JAAIVD010000027;XM_032910156 XP_032766047 angiopoietin-related protein 5 protein-coding 625905210 LOC116893471 vomeronasal type-1 receptor 4-like 2 180308064 180310042 - 116893471 MODEL JAAIVD010000001 pseudo 625905211 LOC116898174 CAP-Gly domain-containing linker protein 1-like 4 127399130 127402814 - 116898174 MODEL JAAIVD010000003 pseudo 625905212 Ift22 intraflagellar transport 22 FOUND IN centrosome (ortholog); cilium (ortholog); intraciliary transport particle A (ortholog) 16 17092987 17113937 - 30032202 116885486 MODEL JAAIVD010000004;XM_032886776;XM_032886777 XP_032742667;XP_032742668 intraflagellar transport protein 22 homolog protein-coding 625905227 LOC116886968 40S ribosomal protein S8-like 18 36265288 36266771 + 116886968 MODEL JAAIVD010000013 pseudo 625905228 Bid BH3 interacting domain death agonist ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN establishment of protein localization to membrane (ortholog); extrinsic apoptotic signaling pathway (ortholog); glial cell apoptotic process (ortholog); PARTICIPATES IN ceramide signaling pathway; FasL mediated signaling pathway; intrinsic apoptotic pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); bronchopulmonary dysplasia (ortholog); epilepsy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) 6 25844885 25854347 + 22301074;30032202 116903323 MODEL JAAIVD010000024;XM_032905760 XP_032761651 BH3-interacting domain death agonist protein-coding 625905237 LOC116888924 60S ribosomal protein L26-like X 65658148 65658603 - 116888924 MODEL JAAIVD010000014 pseudo 625905238 Fbxw2 F-box and WD repeat domain containing 2 FOUND IN cytoplasm (ortholog) 5 820459 846341 + 22301074 116901110 MODEL JAAIVD010000023;XM_032902674;XM_032902675;XM_032902676;XM_032902677;XM_032902678 XP_032758565;XP_032758566;XP_032758567;XP_032758568;XP_032758569 F-box/WD repeat-containing protein 2 protein-coding 625905263 Il19 interleukin 19 INVOLVED IN negative regulation of extrinsic apoptotic signaling pathway (ortholog); negative regulation of low-density lipoprotein particle clearance (ortholog); positive regulation of apoptotic signaling pathway (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; ASSOCIATED WITH asthma (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); chronic kidney disease (ortholog) 10 4871404 4877923 + 116911549 MODEL JAAIVD010000005;XM_032915539 XP_032771430 interleukin-19 protein-coding 625905270 LOC116909094 tether containing UBX domain for GLUT4-like 9 234129 235514 - 116909094 MODEL JAAIVD010000002 pseudo 625905271 LOC116908381 U1 spliceosomal RNA 8 31014504 31014671 + 116908381 MODEL JAAIVD010000027;XR_004388928 snrna 625905274 LOC116895341 40S ribosomal protein S19-like 3 41852096 41852563 + 116895341 MODEL JAAIVD010000012 pseudo 625905275 LOC116884901 40S ribosomal protein S2-like 15 3648558 3649067 + 22301074 116884901 MODEL JAAIVD010000010;XM_032886128 XP_032742019 protein-coding 625905278 LOC116907628 cytochrome b-c1 complex subunit 1, mitochondrial ENCODES a protein that exhibits protein-containing complex binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN mitochondrial electron transport, ubiquinol to cytochrome c (ortholog); response to activity (ortholog); response to alkaloid (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); hypertrophic cardiomyopathy (ortholog); PARKINSONISM WITH POLYNEUROPATHY (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex III (ortholog) 8 100215623 100226767 + 22301074;30032202 116907628 MODEL JAAIVD010000027;XM_032910688 XP_032766579 protein-coding 625905295 Vil1 villin 1 ENCODES a protein that exhibits actin filament binding (ortholog); calcium ion binding (ortholog); cysteine-type endopeptidase inhibitor activity involved in apoptotic process (ortholog); INVOLVED IN actin filament capping (ortholog); actin filament depolymerization (ortholog); actin filament polymerization (ortholog); ASSOCIATED WITH cholestasis (ortholog); FOUND IN actin filament bundle (ortholog); brush border (ortholog); filopodium (ortholog) 4 147856303 147884694 + 22301074;30032202 116899500 MODEL JAAIVD010000003;XM_032901344 XP_032757235 villin-1 protein-coding 625905319 Thap11 THAP domain containing 11 ENCODES a protein that exhibits core promoter sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell population proliferation (ortholog); electron transport chain (ortholog); gene expression (ortholog); ASSOCIATED WITH methylmalonic aciduria and homocystinuria type cblC (ortholog); Methylmalonic Aciduria and Homocystinuria, cblL Type (ortholog); Spinocerebellar Ataxia 51 (ortholog); FOUND IN nucleoplasm (ortholog) 17 25593575 25595465 + 30032202 116886421 MODEL JAAIVD010000011;XM_032887906 XP_032743797 THAP domain-containing protein 11 protein-coding 625905324 LOC116884402 uncharacterized LOC116884402 1 269092128 269124987 - 116884402 MODEL JAAIVD010000025;XM_032885507;XM_032885510 XP_032741398;XP_032741401 uncharacterized protein LOC116884402 protein-coding 625905333 LOC116914878 uncharacterized LOC116914878 13 70465206 70468793 - 116914878 MODEL JAAIVD010000008;XR_004389783 ncrna 625905337 Tdrd9 tudor domain containing 9 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); INVOLVED IN fertilization (ortholog); male meiosis I (ortholog); male meiotic nuclear division (ortholog); ASSOCIATED WITH azoospermia (ortholog); COVID-19 (ortholog); male infertility (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); piP-body (ortholog) 7 129564529 129675816 + 22301074;30032202 116905505 MODEL JAAIVD010000026;XM_032908529 XP_032764420 ATP-dependent RNA helicase TDRD9 protein-coding 625905376 LOC116900655 glyceraldehyde-3-phosphate dehydrogenase-like 5 119397060 119398060 + 116900655 MODEL JAAIVD010000023 pseudo 625905377 LOC116913018 U1 spliceosomal RNA 11 52464727 52464877 + 116913018 MODEL JAAIVD010000006 pseudo 625905378 Pah phenylalanine hydroxylase ENCODES a protein that exhibits identical protein binding (ortholog); iron ion binding (ortholog); phenylalanine 4-monooxygenase activity (ortholog); INVOLVED IN L-phenylalanine catabolic process (ortholog); L-tyrosine biosynthetic process (ortholog); protein hydroxylation (ortholog); PARTICIPATES IN phenylketonuria pathway; tyrosinemia type II pathway; tyrosinemia type III pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); BH4-deficient hyperphenylalaninemia A (ortholog); breast cancer (ortholog); FOUND IN cytosol (ortholog) 1 166623420 166678631 + 22301074;30032202 116911692 MODEL JAAIVD010000025;XM_032915689 XP_032771580 phenylalanine-4-hydroxylase protein-coding 625905393 Parp16 poly(ADP-ribose) polymerase family member 16 ENCODES a protein that exhibits kinase binding (ortholog); NAD+ poly-ADP-ribosyltransferase activity (ortholog); NAD+-protein mono-ADP-ribosyltransferase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); endoplasmic reticulum unfolded protein response (ortholog); IRE1-mediated unfolded protein response (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum tubular network (ortholog); nuclear envelope (ortholog) 8 59517799 59534967 + 22301074;30032202 116908198 MODEL JAAIVD010000027;XM_032911480 XP_032767371 protein mono-ADP-ribosyltransferase PARP16 protein-coding 625905402 E2f8 E2F transcription factor 8 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cell cycle comprising mitosis without cytokinesis (ortholog); cell population proliferation (ortholog); chorionic trophoblast cell differentiation (ortholog); ASSOCIATED WITH Disease Progression (ortholog); hepatocellular carcinoma (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 150966014 150982473 + 30032202 116892074 MODEL JAAIVD010000001;XM_032893547 XP_032749438 transcription factor E2F8 protein-coding 625905419 Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); ATP hydrolysis activity (ortholog); promoter-specific chromatin binding (ortholog); INVOLVED IN apoptotic process (ortholog); DNA repair (ortholog); DNA topological change (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Arsenic Poisoning (ortholog); asphyxia neonatorum (ortholog); FOUND IN nucleoplasm (ortholog); transcription factor TFIID complex (ortholog); transcription factor TFIIH core complex (ortholog) 15 11958961 11989623 - 22301074;30032202 116884577 MODEL JAAIVD010000010;XM_032885719 XP_032741610 general transcription and DNA repair factor IIH helicase subunit XPB protein-coding 625905438 Gpi glucose-6-phosphate isomerase ENCODES a protein that exhibits glucose-6-phosphate isomerase activity (ortholog); monosaccharide binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN fructose 6-phosphate metabolic process (ortholog); glucose 6-phosphate metabolic process (ortholog); learning or memory (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; Fanconi syndrome pathway; fructose-1,6-bisphosphatase deficiency pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); Animal Disease Models (ortholog) 2 164454431 164482993 + 22301074;30032202 116892282 MODEL JAAIVD010000001;XM_032893879 XP_032749770 protein-coding 625905460 LOC116912617 synaptonemal complex central element protein 2-like 11 29219787 29221773 + 116912617 MODEL JAAIVD010000006 pseudo 625905461 Nxt2 nuclear transport factor 2 like export factor 2 ASSOCIATED WITH male infertility (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) X 94355899 94362103 + 30032202 116889131 MODEL JAAIVD010000014;XM_032890302 XP_032746193 NTF2-related export protein 2 protein-coding 625905469 Pask PAS domain containing serine/threonine kinase ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN energy homeostasis (ortholog); negative regulation of glycogen biosynthetic process (ortholog); protein autophosphorylation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); chromosome 2q37 deletion syndrome (ortholog); chronic kidney disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 4 165237659 165266589 - 22301074;30032202 116899662 MODEL JAAIVD010000003;XM_032901673 XP_032757564 PAS domain-containing serine/threonine-protein kinase protein-coding 625905490 Dcaf17 DDB1 and CUL4 associated factor 17 INVOLVED IN acrosome assembly (ortholog); cell morphogenesis (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH genetic disease (ortholog); neurodegeneration with brain iron accumulation (ortholog); Woodhouse-Sakati syndrome (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); nucleoplasm (ortholog) 5 48347930 48373700 + 22301074;30032202 116901500 MODEL JAAIVD010000023;XM_032903469;XR_004388002 XP_032759360 DDB1- and CUL4-associated factor 17 protein-coding 625905509 LOC116895161 60 kDa heat shock protein, mitochondrial-like 3 22331603 22412099 - 116895161 MODEL JAAIVD010000012 pseudo 625905510 LOC116900542 olfactory receptor 4K3-like 5 89693218 89694138 + 22301074 116900542 MODEL JAAIVD010000023;XM_032902270 XP_032758161 protein-coding 625905514 Xbp1 X-box binding protein 1 ENCODES a protein that exhibits chromatin DNA binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN adipose tissue development (ortholog); angiogenesis (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; forkhead class A signaling pathway; ASSOCIATED WITH Acute-On-Chronic Liver Failure (ortholog); borna disease (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 11 74465840 74471293 + 30032202 116912109 MODEL JAAIVD010000006;XM_032916010 XP_032771901 X-box-binding protein 1 protein-coding 625905523 LOC116887522 sodium-dependent glucose transporter 1A-like 18 39814396 39824750 - 116887522 MODEL JAAIVD010000013 pseudo 625905524 Dlx1 distal-less homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell differentiation (ortholog); cellular response to BMP stimulus (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 5 48823507 48827563 + 22301074;30032202 116901508 MODEL JAAIVD010000023;XM_032903478 XP_032759369 homeobox protein DLX-1 protein-coding 625905531 Mttp microsomal triglyceride transfer protein ENCODES a protein that exhibits apolipoprotein binding (ortholog); ceramide 1-phosphate transfer activity (ortholog); cholesterol transfer activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); cholesterol metabolic process (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH abdominal obesity-metabolic syndrome 1 (ortholog); abetalipoproteinemia (ortholog); Abetalipoproteinemia Neuropathy (ortholog); FOUND IN basolateral plasma membrane (ortholog); brush border membrane (ortholog); endoplasmic reticulum (ortholog) 3 21031510 21072723 + 22301074;30032202 116896212 MODEL JAAIVD010000012;XM_032897264 XP_032753155 microsomal triglyceride transfer protein large subunit protein-coding 625905553 Star steroidogenic acute regulatory protein ENCODES a protein that exhibits cholesterol binding (ortholog); cholesterol transfer activity (ortholog); INVOLVED IN bile acid biosynthetic process (ortholog); C21-steroid hormone biosynthetic process (ortholog); cellular response to alkaloid (ortholog); PARTICIPATES IN aldosterone biosynthetic pathway; cortisol biosynthetic pathway; estradiol biosynthetic pathway; ASSOCIATED WITH Cardiomegaly (ortholog); congenital adrenal hyperplasia (ortholog); Disorders of Environmental Origin (ortholog); FOUND IN mitochondrial crista (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 13 60684853 60693029 - 22301074;30032202 116914289 MODEL JAAIVD010000008;XM_032918521 XP_032774412 steroidogenic acute regulatory protein, mitochondrial protein-coding 625905564 LOC116898551 putative sperm motility kinase W 4 154724008 154725489 - 22301074;30032202 116898551 MODEL JAAIVD010000003;XM_032899763 XP_032755654 protein-coding 625905567 Pigf phosphatidylinositol glycan anchor biosynthesis class F INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH ONYCHODYSTROPHY, OSTEODYSTROPHY, IMPAIRED INTELLECTUAL DEVELOPMENT, AND SEIZURES SYNDROME (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 7 5961536 5989293 + 22301074 116905756 MODEL JAAIVD010000026;XM_032908724;XM_032908726;XM_032908727 XP_032764615;XP_032764617;XP_032764618 phosphatidylinositol-glycan biosynthesis class F protein protein-coding 625905584 Hdac3 histone deacetylase 3 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); cyclin binding (ortholog); INVOLVED IN cellular response to fluid shear stress (ortholog); cellular response to mechanical stimulus (ortholog); cellular response to parathyroid hormone stimulus (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute kidney failure (ortholog); adenocarcinoma (ortholog); Anaphylaxis (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 15 6967522 6986716 + 22301074 116884520 MODEL JAAIVD010000010;XM_032885654 XP_032741545 protein-coding 625905603 Slc19a3 solute carrier family 19 member 3 ENCODES a protein that exhibits thiamine transmembrane transporter activity (ortholog); INVOLVED IN pyridoxine transport (ortholog); thiamine diphosphate biosynthetic process (ortholog); thiamine transmembrane transport (ortholog); ASSOCIATED WITH basal ganglia disease (ortholog); biotin-responsive basal ganglia disease (ortholog); chronic kidney disease (ortholog); FOUND IN plasma membrane (ortholog) 4 155845306 155857618 - 22301074;30032202 116899569 MODEL JAAIVD010000003;XM_032901481 XP_032757372 thiamine transporter 2 protein-coding 625905611 Catsper1 cation channel sperm associated 1 ENCODES a protein that exhibits voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); flagellated sperm motility (ortholog); fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); ASSOCIATED WITH glycogen storage disease V (ortholog); male infertility (ortholog); spermatogenic failure 7 (ortholog); FOUND IN CatSper complex (ortholog); plasma membrane (ortholog); sperm flagellum (ortholog) 2 2329328 2337871 - 22301074;30032202 116890705 MODEL JAAIVD010000001;XM_032891135 XP_032747026 cation channel sperm-associated protein 1 protein-coding 625905625 Phip pleckstrin homology domain interacting protein ENCODES a protein that exhibits histone reader activity (ortholog); INVOLVED IN insulin receptor signaling pathway (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of extrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); DEVELOPMENTAL DELAY, INTELLECTUAL DISABILITY, OBESITY, AND DYSMORPHIC FEATURES (ortholog); Developmental Disease (ortholog); FOUND IN nucleus (ortholog) 8 77037687 77154743 - 22301074;30032202 116906605 MODEL JAAIVD010000027;XM_032909356 XP_032765247 PH-interacting protein protein-coding 625905669 Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 ENCODES a protein that exhibits hydroxymethylglutaryl-CoA synthase activity (ortholog); isomerase activity (ortholog); organic acid binding (ortholog); INVOLVED IN cellular response to cholesterol (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); cellular response to low-density lipoprotein particle stimulus (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH congenital myopathy 28 (ortholog); Experimental Diabetes Mellitus (ortholog); obesity (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 3 177207664 177225430 - 22301074;30032202 116897167 MODEL JAAIVD010000012;XM_032898843;XM_032898844 XP_032754734;XP_032754735 hydroxymethylglutaryl-CoA synthase, cytoplasmic protein-coding 625905689 Atp6v0d1 ATPase H+ transporting V0 subunit d1 ENCODES a protein that exhibits guanyl nucleotide exchange factor activator activity (ortholog); protein-containing complex binding (ortholog); proton transmembrane transporter activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to increased oxygen levels (ortholog); intracellular iron ion homeostasis (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); lipodystrophy (ortholog); FOUND IN apical plasma membrane (ortholog); axon terminus (ortholog); centrosome (ortholog) 17 25252474 25297073 - 22301074;30032202 116886664 MODEL JAAIVD010000011;XM_032888155 XP_032744046 V-type proton ATPase subunit d 1 protein-coding 625905701 Got2 glutamic-oxaloacetic transaminase 2 ENCODES a protein that exhibits amino acid binding (ortholog); carboxylic acid binding (ortholog); enzyme binding (ortholog); INVOLVED IN amino acid metabolic process (ortholog); dicarboxylic acid metabolic process (ortholog); fatty acid transport (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; argininosuccinic aciduria pathway; carbamoyl phosphate synthetase I deficiency pathway; ASSOCIATED WITH acute kidney failure (ortholog); developmental and epileptic encephalopathy (ortholog); developmental and epileptic encephalopathy 82 (ortholog); FOUND IN cell surface (ortholog); mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog) 17 2676621 2702797 - 22301074;30032202 116886264 MODEL JAAIVD010000011;XM_032887686 XP_032743577 aspartate aminotransferase, mitochondrial protein-coding 625905715 LOC116905155 dehydrogenase/reductase SDR family member 7-like 7 86917719 86932988 - 22301074 116905155 MODEL JAAIVD010000026;XM_032907927 XP_032763818 protein-coding 625905726 Dapk1 death associated protein kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); calcium/calmodulin-dependent protein kinase activity (ortholog); calmodulin binding (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); cellular response to hydroperoxide (ortholog); PARTICIPATES IN type II interferon signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) 14 77393270 77551116 - 22301074;30032202 116883991 MODEL JAAIVD010000009;XM_032885227;XM_032885228 XP_032741118;XP_032741119 death-associated protein kinase 1 protein-coding 625905761 LOC116883465 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-like 14 31585046 31585387 + 22301074;30032202 116883465 MODEL JAAIVD010000009;XM_032884617 XP_032740508 protein-coding 625905765 LOC116894167 olfactory receptor 6-like 2 105080521 105081470 - 22301074 116894167 MODEL JAAIVD010000001;XM_032895882 XP_032751773 protein-coding 625905768 Exosc5 exosome component 5 ENCODES a protein that exhibits RNA exonuclease activity (ortholog); INVOLVED IN defense response to virus (ortholog); DNA deamination (ortholog); mRNA catabolic process (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH CEREBELLAR ATAXIA, BRAIN ABNORMALITIES, AND CARDIAC CONDUCTION DEFECTS (ortholog); Disease Progression (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); euchromatin (ortholog); exosome (RNase complex) (ortholog) 2 169126436 169135573 - 30032202 116892453 MODEL JAAIVD010000001;XM_032894165 XP_032750056 exosome complex component RRP46 protein-coding 625905778 Prdx2 peroxiredoxin 2 ENCODES a protein that exhibits antioxidant activity (ortholog); thioredoxin peroxidase activity (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); defense response to tumor cell (ortholog); homeostasis of number of cells (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); asbestosis (ortholog); carcinoma (ortholog); FOUND IN cytosol (ortholog) 17 15316343 15321399 - 30032202 116886040 MODEL JAAIVD010000011;XM_032887343;XM_032887344 XP_032743234;XP_032743235 peroxiredoxin-2 protein-coding 625905792 LOC116900344 olfactory receptor 10AG1-like 5 68938409 68939380 + 22301074 116900344 MODEL JAAIVD010000023;XM_032902098 XP_032757989 protein-coding 625905795 Uchl1 ubiquitin C-terminal hydrolase L1 ENCODES a protein that exhibits alpha-2A adrenergic receptor binding (ortholog); cysteine-type deubiquitinase activity (ortholog); cysteine-type endopeptidase activity (ortholog); INVOLVED IN adult walking behavior (ortholog); axon target recognition (ortholog); axonal transport of mitochondrion (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Deglutition Disorders (ortholog); Diaphragmatic Hernia (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) 11 23802670 23813185 + 22301074;30032202 116912324 MODEL JAAIVD010000006;XM_032916359 XP_032772250 ubiquitin carboxyl-terminal hydrolase isozyme L1 protein-coding 625905808 Agpat5 1-acylglycerol-3-phosphate O-acyltransferase 5 ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); INVOLVED IN acylglycerol metabolic process (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH Keloid (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondrion (ortholog); nuclear envelope (ortholog) 13 65306549 65350332 - 22301074;30032202 116914283 MODEL JAAIVD010000008;XM_032918506 XP_032774397 1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon protein-coding 625905820 Zfand6 zinc finger AN1-type containing 6 ENCODES a protein that exhibits polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN cellular response to tumor necrosis factor (ortholog); negative regulation of apoptotic process (ortholog); protein targeting to peroxisome (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); Delayed Emergence from Anesthesia (ortholog); skin disease (ortholog) 2 115699959 115756672 + 22301074;30032202 116891874 MODEL JAAIVD010000001;XM_032893275;XM_032893276;XM_032893277;XM_032893278;XM_032893279 XP_032749166;XP_032749167;XP_032749168;XP_032749169;XP_032749170 AN1-type zinc finger protein 6 protein-coding 625905845 Ibtk inhibitor of Bruton tyrosine kinase ENCODES a protein that exhibits protein kinase binding (ortholog); protein tyrosine kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of protein phosphorylation (ortholog); release of sequestered calcium ion into cytosol (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 8 79748113 79812882 - 30032202 116906714 MODEL JAAIVD010000027;XM_032909520 XP_032765411 protein-coding 625905878 LOC116911636 glyceraldehyde-3-phosphate dehydrogenase-like 10 34359887 34360886 + 116911636 MODEL JAAIVD010000005 pseudo 625905879 LOC116888297 uncharacterized LOC116888297 X 130277659 130288684 - 116888297 MODEL JAAIVD010000014;XR_004386301 ncrna 625905885 Ces5a carboxylesterase 5A 17 435348 464000 - 116886495 MODEL JAAIVD010000011;XM_032887999 XP_032743890 protein-coding 625905901 LOC116887703 patr class I histocompatibility antigen, A-126 alpha chain-like 18 9974901 9978855 - 30032202 116887703 MODEL JAAIVD010000013;XM_032889301 XP_032745192 protein-coding 625905908 LOC116906068 oligosaccharyltransferase complex subunit OSTC-like 7 56934516 56962110 - 116906068 MODEL JAAIVD010000026 pseudo 625905909 LOC116902661 U6 spliceosomal RNA 5 63908867 63908973 - 116902661 MODEL JAAIVD010000023;XR_004388223 snrna 625905912 LOC116894939 small nucleolar RNA SNORD115 2 140320608 140320684 - 116894939 MODEL JAAIVD010000001;XR_004387137 snorna 625905915 Cldn19 claudin 19 ENCODES a protein that exhibits cell-cell adhesion mediator activity (ortholog); identical protein binding (ortholog); paracellular tight junction channel activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); apical junction assembly (ortholog); cell junction assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); nephrocalcinosis (ortholog); renal hypomagnesemia 3 (ortholog); FOUND IN apical junction complex (ortholog); basolateral plasma membrane (ortholog); bicellular tight junction (ortholog) 1 37695665 37700178 - 30032202 116897662 MODEL JAAIVD010000025;XM_032899153 XP_032755044 claudin-19 protein-coding 625905924 LOC116887425 class II histocompatibility antigen, M alpha chain ENCODES a protein that exhibits MHC class II protein complex binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); immunoglobulin mediated immune response (ortholog); ASSOCIATED WITH contact dermatitis (ortholog); Diabetic Nephropathies (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cell surface (ortholog); endosome membrane (ortholog); late endosome (ortholog) 18 8180772 8184189 - 22301074;30032202 116887425 MODEL JAAIVD010000013;XM_032889042 XP_032744933 protein-coding 625905933 Gtf2f2 general transcription factor IIF subunit 2 ENCODES a protein that exhibits RNA polymerase II general transcription initiation factor activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); RNA polymerase II preinitiation complex assembly (ortholog); transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; RNA polymerase II transcription initiation pathway; FOUND IN microtubule cytoskeleton (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 12 48403561 48525528 + 22301074;30032202 116913301 MODEL JAAIVD010000007;XM_032917430 XP_032773321 protein-coding 625905945 LOC116888455 uncharacterized LOC116888455 X 67517383 67520840 + 116888455 MODEL JAAIVD010000014;XM_032889735 XP_032745626 uncharacterized protein LOC116888455 protein-coding 625905951 LOC116911706 contactin-associated protein like 5-2-like 10 76060584 76067848 - 30032202 116911706 MODEL JAAIVD010000005;XM_032915670 XP_032771561 protein-coding 625905958 Taf1b TATA-box binding protein associated factor, RNA polymerase I subunit B ENCODES a protein that exhibits RNA polymerase I core promoter sequence-specific DNA binding (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); RNA polymerase I preinitiation complex assembly (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH Lynch syndrome (ortholog); mismatch repair cancer syndrome (ortholog); orofacial cleft 1 (ortholog); FOUND IN nucleolus (ortholog); RNA polymerase I core factor complex (ortholog); RNA polymerase transcription factor SL1 complex (ortholog) 7 38102381 38173129 + 30032202 116904911 MODEL JAAIVD010000026;XM_032907521 XP_032763412 TATA box-binding protein-associated factor RNA polymerase I subunit B protein-coding 625905977 Btn1a1 butyrophilin subfamily 1 member A1 14 42463704 42471548 - 30032202 116883550 MODEL JAAIVD010000009;XM_032884720;XM_032884721 XP_032740611;XP_032740612 protein-coding 625905988 LOC116891852 olfactory receptor 5B2-like 2 13282517 13283461 + 22301074;30032202 116891852 MODEL JAAIVD010000001;XM_032893224 XP_032749115 protein-coding 625905991 Gfus GDP-L-fucose synthase ENCODES a protein that exhibits GDP-L-fucose synthase activity (ortholog); GDP-mannose 3,5-epimerase activity (ortholog); identical protein binding (ortholog); INVOLVED IN 'de novo' GDP-L-fucose biosynthetic process (ortholog); GDP-mannose metabolic process (ortholog); positive regulation of endothelial cell migration (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructosuria pathway; hereditary fructose intolerance syndrome pathway; FOUND IN cytosol (ortholog) 1 248244171 248248990 - 22301074;30032202 116912784 MODEL JAAIVD010000025;XM_032916949;XM_032916955 XP_032772840;XP_032772846 Tsta3 tissue specific transplantation antigen P35B protein-coding 625906009 LOC116889049 cilia- and flagella-associated protein 47-like X 21579327 21586698 + 22301074 116889049 MODEL JAAIVD010000014;XM_032890239 XP_032746130 protein-coding 625906016 LOC116911121 60S ribosomal protein L15-like 10 31733076 31733770 - 116911121 MODEL JAAIVD010000005 pseudo 625906017 LOC116911248 uncharacterized LOC116911248 10 13684549 13717189 + 116911248 MODEL JAAIVD010000005;XR_004389319 ncrna 625906021 LOC116914130 small nucleolar RNA SNORA17 12 61765606 61765730 + 116914130 MODEL JAAIVD010000007 pseudo 625906022 LOC116906079 D-3-phosphoglycerate dehydrogenase-like 7 64256703 64263729 - 116906079 MODEL JAAIVD010000026 pseudo 625906023 Ifit3 interferon induced protein with tetratricopeptide repeats 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to interferon-beta (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); congestive heart failure (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 2 34207198 34212339 + 22301074;30032202 116891109 MODEL JAAIVD010000001;XM_032891822 XP_032747713 interferon-induced protein with tetratricopeptide repeats 3 protein-coding 625906029 LOC116895009 small nucleolar RNA SNORA48 2 57028039 57028181 - 116895009 MODEL JAAIVD010000001;XR_004387197 snorna 625906032 Kri1 KRI1 homolog FOUND IN nucleolus (ortholog) 8 17539187 17553267 - 30032202 116906675 MODEL JAAIVD010000027;XM_032909462 XP_032765353 protein KRI1 homolog protein-coding 625906055 Cpt1a carnitine palmitoyltransferase 1A ENCODES a protein that exhibits carnitine O-palmitoyltransferase activity (ortholog); identical protein binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN carnitine metabolic process (ortholog); cellular response to fatty acid (ortholog); eating behavior (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; carnitine palmitoyltransferase I deficiency pathway; ethylmalonic encephalopathy pathway; ASSOCIATED WITH alcoholic hepatitis (ortholog); atherosclerosis (ortholog); Breast Neoplasms (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 2 4275893 4335667 - 30032202 116890811 MODEL JAAIVD010000001;XM_032891308 XP_032747199 carnitine O-palmitoyltransferase 1, liver isoform protein-coding 625906079 LOC116886775 U2 spliceosomal RNA 17 3856044 3856222 + 116886775 MODEL JAAIVD010000011 pseudo 625906080 Cachd1 cache domain containing 1 ASSOCIATED WITH genetic disease (ortholog) 1 53529761 53753261 - 30032202 116899760 MODEL JAAIVD010000025;XM_032901775 XP_032757666 VWFA and cache domain-containing protein 1 protein-coding 625906111 Tgfb1i1 transforming growth factor beta 1 induced transcript 1 ENCODES a protein that exhibits I-SMAD binding (ortholog); nuclear androgen receptor binding (ortholog); Roundabout binding (ortholog); INVOLVED IN cell fate commitment (ortholog); epithelial cell differentiation (ortholog); morphogenesis of embryonic epithelium (ortholog); FOUND IN focal adhesion (ortholog) 2 73683375 73690089 - 30032202 116891440 MODEL JAAIVD010000001;XM_032892501;XM_032892503;XM_032892504 XP_032748392;XP_032748394;XP_032748395 transforming growth factor beta-1-induced transcript 1 protein protein-coding 625906132 LOC116914524 60S ribosomal protein L17-like 13 68329375 68329859 - 116914524 MODEL JAAIVD010000008 pseudo 625906133 LOC116894225 alpha-enolase-like 2 107204596 107206032 - 22301074;30032202 116894225 MODEL JAAIVD010000001;XM_032895936 XP_032751827 protein-coding 625906138 LOC116906536 serine protease 46 8 101426423 101438139 + 22301074;30032202 116906536 MODEL JAAIVD010000027;XM_032909231 XP_032765122 protein-coding 625906146 Mical3 microtubule associated monooxygenase, calponin and LIM domain containing 3 ENCODES a protein that exhibits actin binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN actin filament depolymerization (ortholog); cytoskeleton organization (ortholog); FOUND IN cytosol (ortholog); Flemming body (ortholog); nucleoplasm (ortholog) 6 25617251 25814824 + 22301074 116903322 MODEL JAAIVD010000024;XM_032905758;XM_032905759 XP_032761649;XP_032761650 F-actin-monooxygenase MICAL3 protein-coding 625906186 Znf512b zinc finger protein 512B ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN constitutive heterochromatin formation (ortholog); negative regulation of miRNA transcription (ortholog); FOUND IN nucleoplasm (ortholog); pericentric heterochromatin (ortholog) 5 158672048 158682493 - 22301074 116902447 MODEL JAAIVD010000023;XM_032904999;XM_032905000;XM_032905001;XM_032905002;XM_032905003;XM_032905004 XP_032760890;XP_032760891;XP_032760892;XP_032760893;XP_032760894;XP_032760895 protein-coding 625906221 Snca synuclein alpha ENCODES a protein that exhibits actin binding (ortholog); alpha-tubulin binding (ortholog); arachidonate binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); amyloid fibril formation (ortholog); behavioral response to cocaine (ortholog); PARTICIPATES IN apoptotic cell death pathway; Parkinson's disease pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Alzheimer's disease (ortholog); amphetamine abuse (ortholog); FOUND IN actin cytoskeleton (ortholog); axon (ortholog); axon terminus (ortholog) 6 81929667 82027272 + 22301074;30032202 116903722 MODEL JAAIVD010000024;XM_032906402;XM_032906403 XP_032762293;XP_032762294 alpha-synuclein protein-coding 625906236 Gna11 G protein subunit alpha 11 ENCODES a protein that exhibits alkylglycerophosphoethanolamine phosphodiesterase activity (ortholog); G protein activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN action potential (ortholog); cellular response to pH (ortholog); cranial skeletal system development (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphaq protein family; angiotensin II signaling pathway via AT1 receptor; eicosanoid signaling pathway; ASSOCIATED WITH autosomal dominant hypocalcemia 2 (ortholog); CLOVES syndrome (ortholog); congenital heart disease (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); heterotrimeric G-protein complex (ortholog) 1 153345555 153361830 + 22301074;30032202 116904205 MODEL JAAIVD010000025;XM_032907126 XP_032763017 guanine nucleotide-binding protein subunit alpha-11 protein-coding 625906247 LOC116908674 NHP2-like protein 1 9 22967858 22968241 - 116908674 MODEL JAAIVD010000002 pseudo 625906248 LOC116903888 28S ribosomal protein S36, mitochondrial-like 6 24707015 24707298 - 116903888 MODEL JAAIVD010000024 pseudo 625906249 LOC116911099 uncharacterized LOC116911099 10 67444782 67445824 + 116911099 MODEL JAAIVD010000005;XR_004389311 ncrna 625906253 LOC116886693 RNA-binding protein 8A-like 17 27290338 27290673 + 22301074;30032202 116886693 MODEL JAAIVD010000011;XM_032888190 XP_032744081 protein-coding 625906256 Pggt1b protein geranylgeranyltransferase type I subunit beta ENCODES a protein that exhibits CAAX-protein geranylgeranyltransferase activity (ortholog); heterocyclic compound binding (ortholog); peptide binding (ortholog); INVOLVED IN CAAX-box protein maturation (ortholog); positive regulation of cell cycle (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH Lung Neoplasms (ortholog); FOUND IN CAAX-protein geranylgeranyltransferase complex (ortholog) 15 40776288 40819678 + 22301074;30032202 116884261 MODEL JAAIVD010000010;XM_032885346;XM_032885347 XP_032741237;XP_032741238 geranylgeranyl transferase type-1 subunit beta protein-coding 625906273 LOC116897543 small nucleolar RNA SNORA17 3 198257343 198257474 + 116897543 MODEL JAAIVD010000012;XR_004387557 snorna 625906276 Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase ENCODES a protein that exhibits methionine synthase activity (ortholog); methyltransferase activity (ortholog); INVOLVED IN axon regeneration (ortholog); cellular response to methionine (ortholog); cellular response to nitric oxide (ortholog); PARTICIPATES IN altered folate cycle metabolic pathway; altered folate mediated one-carbon metabolic pathway; choline metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog) 14 25754399 25823441 + 22301074 116883380 MODEL JAAIVD010000009;XM_032884495 XP_032740386 methionine synthase protein-coding 625906312 LOC116887113 keratin-associated protein 12-1-like 18 1066555 1066884 + 22301074 116887113 MODEL JAAIVD010000013;XM_032888656 XP_032744547 protein-coding 625906315 Dcp1b decapping mRNA 1B INVOLVED IN cellular response to interleukin-17 (ortholog); protein localization to nucleus (ortholog); protein localization to P-body (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); P-body (ortholog) 6 27530940 27569711 - 22301074;30032202 116903346 MODEL JAAIVD010000024;XM_032905807;XM_032905808 XP_032761698;XP_032761699 mRNA-decapping enzyme 1B protein-coding 625906330 LOC116911582 ubiquitin-conjugating enzyme E2 D4-like 10 17590126 17590737 - 116911582 MODEL JAAIVD010000005 pseudo 625906331 LOC116910652 U8 small nucleolar RNA 9 48668271 48668406 + 116910652 MODEL JAAIVD010000002;XR_004389186 snorna 625906334 Dnaaf2 dynein axonemal assembly factor 2 INVOLVED IN axonemal dynein complex assembly (ortholog); cilium-dependent cell motility (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Kartagener syndrome (ortholog); primary ciliary dyskinesia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 7 82851394 82857709 - 22301074;30032202 116905112 MODEL JAAIVD010000026;XM_032907849 XP_032763740 protein kintoun protein-coding 625906341 LOC116897654 small nucleolar RNA U3 3 219437068 219437154 - 116897654 MODEL JAAIVD010000012 pseudo 625906342 LOC116893948 peroxiredoxin-2-like 2 95744149 95744868 + 116893948 MODEL JAAIVD010000001 pseudo 625906343 LOC116911386 glyceraldehyde-3-phosphate dehydrogenase-like 10 63307047 63308066 - 116911386 MODEL JAAIVD010000005 pseudo 625906344 LOC116885296 2'-5'-oligoadenylate synthase 1A 16 32934946 32945689 + 30032202 116885296 MODEL JAAIVD010000004;XM_032886545 XP_032742436 protein-coding 625906355 Atpsckmt ATP synthase c subunit lysine N-methyltransferase ENCODES a protein that exhibits protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN peptidyl-lysine trimethylation (ortholog); positive regulation of proton-transporting ATP synthase activity, rotational mechanism (ortholog); positive regulation of sensory perception of pain (ortholog); FOUND IN mitochondrial crista (ortholog); mitochondrion (ortholog) 3 149206190 149221631 - 30032202 116897047 MODEL JAAIVD010000012;XM_032898670 XP_032754561 ATP synthase subunit C lysine N-methyltransferase protein-coding 625906364 Tut4 terminal uridylyl transferase 4 ENCODES a protein that exhibits miRNA binding (ortholog); RNA uridylyltransferase activity (ortholog); uridylyltransferase activity (ortholog); INVOLVED IN histone mRNA catabolic process (ortholog); interleukin-6-mediated signaling pathway (ortholog); miRNA catabolic process (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH breast cancer (ortholog); liver benign neoplasm (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); cytosol (ortholog) 1 46298184 46399507 - 22301074;30032202 116899126 MODEL JAAIVD010000025;XM_032900658;XM_032900666;XM_032900675;XM_032900683;XM_032900691;XM_032900701 XP_032756549;XP_032756557;XP_032756566;XP_032756574;XP_032756582;XP_032756592 terminal uridylyltransferase 4 protein-coding 625906412 Chrdl1 chordin like 1 ENCODES a protein that exhibits BMP binding (ortholog); transforming growth factor beta binding (ortholog); INVOLVED IN AMPA glutamate receptor clustering (ortholog); BMP signaling pathway (ortholog); cell fate determination (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH genetic disease (ortholog); megalocornea (ortholog); FOUND IN extracellular region (ortholog) X 95345512 95445866 - 22301074 116889021 MODEL JAAIVD010000014;XM_032890224;XM_032890225 XP_032746115;XP_032746116 chordin-like protein 1 protein-coding 625906430 LOC116908765 uncharacterized LOC116908765 9 59302330 59314287 - 116908765 MODEL JAAIVD010000002;XR_004389023;XR_004389024 ncrna 625906436 Stx16 syntaxin 16 ENCODES a protein that exhibits SNAP receptor activity (ortholog); INVOLVED IN endocytic recycling (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH pseudohypoaldosteronism (ortholog); pseudohypoparathyroidism type 1B (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 5 143884925 143929914 - 22301074;30032202 116902271 MODEL JAAIVD010000023;XM_032904701;XM_032904702;XM_032904703 XP_032760592;XP_032760593;XP_032760594 syntaxin-16 protein-coding 625906452 LOC116908042 zinc finger protein 431-like 8 115283897 115293657 + 22301074 116908042 MODEL JAAIVD010000027;XM_032911316 XP_032767207 protein-coding 625906460 Celf1 CUGBP Elav-like family member 1 ENCODES a protein that exhibits BRE binding (ortholog); lncRNA binding (ortholog); mRNA 3'-UTR binding (ortholog); INVOLVED IN cellular response to polyamine macromolecule (ortholog); cerebral cortex development (ortholog); cerebral cortex neuron differentiation (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nucleoplasm (ortholog) 5 65116541 65190724 + 30032202 116901607 MODEL JAAIVD010000023;XM_032903634;XM_032903635;XM_032903636;XM_032903637;XM_032903638;XM_032903639;XM_032903640;XM_032903641;XM_032903642;XM_032903644 XP_032759525;XP_032759526;XP_032759527;XP_032759528;XP_032759529;XP_032759530;XP_032759531;XP_032759532;XP_032759533;XP_032759535 protein-coding 625906504 Ric3 RIC3 acetylcholine receptor chaperone ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); protein folding chaperone (ortholog); INVOLVED IN positive regulation of cytosolic calcium ion concentration (ortholog); positive regulation of protein localization to cell surface (ortholog); protein-containing complex assembly (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog) 2 92405230 92450939 + 30032202 116891682 MODEL JAAIVD010000001;XM_032892942;XM_032892943;XM_032892944 XP_032748833;XP_032748834;XP_032748835 protein RIC-3 protein-coding 625906519 Meak7 MTOR associated protein, eak-7 homolog INVOLVED IN negative regulation of cellular response to oxidative stress (ortholog); positive regulation of protein localization to lysosome (ortholog); regulation of cell migration (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lysosomal membrane (ortholog) 17 39405486 39427647 - 30032202 116886189 MODEL JAAIVD010000011;XM_032887562 XP_032743453 MTOR-associated protein MEAK7 protein-coding 625906531 Slc2a4rg SLC2A4 regulator ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH prostate cancer (ortholog) 5 158479410 158482752 + 30032202 116901099 MODEL JAAIVD010000023;XM_032902660 XP_032758551 protein-coding 625906541 Gkn1 gastrokine 1 ENCODES a protein that exhibits growth factor activity (ortholog); INVOLVED IN positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); ovarian cyst (ortholog); Stomach Neoplasms (ortholog); FOUND IN extracellular region (ortholog); secretory granule (ortholog) 6 58966261 58971192 + 30032202 116902742 MODEL JAAIVD010000024;XM_032905090 XP_032760981 gastrokine-1 protein-coding 625906551 Heatr1 HEAT repeat containing 1 INVOLVED IN neural precursor cell proliferation (ortholog); positive regulation of rRNA processing (ortholog); positive regulation of transcription by RNA polymerase I (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH glioblastoma (ortholog); pancreatic ductal carcinoma (ortholog); FOUND IN fibrillar center (ortholog); mitochondrion (ortholog); nucleolus (ortholog) 14 26143783 26184468 + 30032202 116884052 MODEL JAAIVD010000009;XM_032885299 XP_032741190 HEAT repeat-containing protein 1 protein-coding 625906598 LOC116889629 55 kDa erythrocyte membrane protein-like Y 1863613 1867615 - 116889629 MODEL JAAIVD010000015 pseudo 625906599 Ly6h lymphocyte antigen 6 family member H ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); acetylcholine receptor inhibitor activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog) 1 247890763 247893222 - 30032202 116912595 MODEL JAAIVD010000025;XM_032916720;XM_032916728;XM_032916735;XM_032916740 XP_032772611;XP_032772619;XP_032772626;XP_032772631 lymphocyte antigen 6H protein-coding 625906617 Fut7 fucosyltransferase 7 ENCODES a protein that exhibits 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase activity (ortholog); alpha-(1->3)-fucosyltransferase activity (ortholog); fucosyltransferase activity (ortholog); INVOLVED IN CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation (ortholog); ceramide metabolic process (ortholog); embryo implantation (ortholog); ASSOCIATED WITH lung cancer (ortholog); polycystic ovary syndrome (ortholog); FOUND IN Golgi apparatus (ortholog); trans-Golgi network (ortholog) 5 11756731 11768578 - 22301074;30032202 116900026 MODEL JAAIVD010000023;XM_032901823 XP_032757714 alpha-(1,3)-fucosyltransferase 7 protein-coding 625906623 LOC116904658 U7 small nuclear RNA 6 114148711 114148773 + 116904658 MODEL JAAIVD010000024;XR_004388358 snrna 625906626 LOC116894252 vomeronasal type-2 receptor 116-like 2 115052762 115102518 + 22301074;30032202 116894252 MODEL JAAIVD010000001;XM_032895958 XP_032751849 protein-coding 625906634 Tbl1xr1 TBL1X/Y related 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); DNA binding (ortholog); histone binding (ortholog); INVOLVED IN adipose tissue development (ortholog); blastocyst hatching (ortholog); fat pad development (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 41 (ortholog); diffuse large B-cell lymphoma (ortholog); genetic disease (ortholog); FOUND IN histone deacetylase complex (ortholog); mitotic spindle (ortholog); nucleus (ortholog) 3 133262113 133401900 + 22301074;30032202 116896998 MODEL JAAIVD010000012;XM_032898602;XM_032898603 XP_032754493;XP_032754494 F-box-like/WD repeat-containing protein TBL1XR1;TBL1X receptor 1 protein-coding 625906657 Reep5 receptor accessory protein 5 INVOLVED IN endoplasmic reticulum membrane organization (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum tubular network (ortholog); junctional sarcoplasmic reticulum membrane (ortholog) 15 9985295 10015017 + 116884482 MODEL JAAIVD010000010;XM_032885599 XP_032741490 receptor expression-enhancing protein 5 protein-coding 625906666 Ap2a1 adaptor related protein complex 2 subunit alpha 1 ENCODES a protein that exhibits low-density lipoprotein particle receptor binding (ortholog); protein kinase binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN clathrin-dependent endocytosis (ortholog); negative regulation of hyaluronan biosynthetic process (ortholog); positive regulation of neuron projection development (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; clathrin-dependent synaptic vesicle endocytosis; FOUND IN AP-2 adaptor complex (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) 2 154613708 154642809 + 22301074;30032202 116892183 MODEL JAAIVD010000001;XM_032893704;XM_032893705 XP_032749595;XP_032749596 AP-2 complex subunit alpha-1 protein-coding 625906695 Gas2l3 growth arrest specific 2 like 3 ENCODES a protein that exhibits actin binding (ortholog); microtubule binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); microtubule cytoskeleton organization (ortholog); response to bacterium (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN actin cytoskeleton (ortholog); microtubule cytoskeleton (ortholog) 1 168451685 168472097 - 22301074;30032202 116889978 MODEL JAAIVD010000025;XM_032890772 XP_032746663 GAS2-like protein 3 protein-coding 625906707 LOC116902944 60S ribosomal protein L7-like 6 122358921 122359704 + 116902944 MODEL JAAIVD010000024 pseudo 625906708 LOC116888629 protein NipSnap homolog 3A-like 1 96777936 96788722 + 30032202 116888629 MODEL JAAIVD010000025;XM_032889927;XM_032889932 XP_032745818;XP_032745823 protein NipSnap homolog 3B-like protein-coding 625906721 LOC116902231 mitochondrial pyruvate carrier 1-like 5 137100457 137100845 - 116902231 MODEL JAAIVD010000023 pseudo 625906722 LOC116894068 olfactory receptor 51G2 2 102909860 102910798 - 22301074 116894068 MODEL JAAIVD010000001;XM_032895791 XP_032751682 protein-coding 625906725 Gpr179 G protein-coupled receptor 179 ENCODES a protein that exhibits protein-membrane adaptor activity (ortholog); INVOLVED IN protein localization to plasma membrane (ortholog); response to light stimulus (ortholog); visual perception (ortholog); ASSOCIATED WITH congenital stationary night blindness (ortholog); congenital stationary night blindness 1B (ortholog); congenital stationary night blindness 1E (ortholog); FOUND IN cell tip (ortholog); dendrite (ortholog); dendrite terminus (ortholog) 9 57036867 57052969 + 22301074 116909758 MODEL JAAIVD010000002;XM_032913443 XP_032769334 probable G-protein coupled receptor 179 protein-coding 625906738 LOC116894509 glyceraldehyde-3-phosphate dehydrogenase-like 2 173597347 173598373 + 116894509 MODEL JAAIVD010000001 pseudo 625906739 LOC116892580 hereditary hemochromatosis protein homolog 2 171864814 171892460 - 30032202 116892580 MODEL JAAIVD010000001;XM_032894360 XP_032750251 protein-coding 625906749 LOC116904191 uncharacterized LOC116904191 6 152916974 152917988 - 22301074 116904191 MODEL JAAIVD010000024;XM_032907104 XP_032762995 uncharacterized protein LOC116904191 protein-coding 625906754 LOC116885272 40S ribosomal protein S5-like 16 38326497 38337449 + 116885272 MODEL JAAIVD010000004 pseudo 625906755 LOC116914126 small nucleolar RNA SNORA17 12 68600825 68600953 - 116914126 MODEL JAAIVD010000007;XR_004389689 snorna 625906758 Zfpm2 zinc finger protein, FOG family member 2 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); transcription coactivator activity (ortholog); transcription corepressor activity (ortholog); INVOLVED IN cardiac muscle tissue development (ortholog); embryonic organ development (ortholog); fat cell differentiation (ortholog); ASSOCIATED WITH 46,XY sex reversal 3 (ortholog); 46,XY sex reversal 9 (ortholog); atrial heart septal defect (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 214333917 214343557 + 30032202 116910916 MODEL JAAIVD010000025;XM_032914674 XP_032770565 zinc finger protein ZFPM2 protein-coding 625906765 LOC116899753 U6 spliceosomal RNA 4 56726099 56726205 - 116899753 MODEL JAAIVD010000003;XR_004387768 snrna 625906768 Cadm3 cell adhesion molecule 3 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN heterophilic cell-cell adhesion (ortholog); homophilic cell-cell adhesion (ortholog); intracellular protein localization (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth Disease Axonal Type 2FF (ortholog); genetic disease (ortholog); prostate cancer (ortholog); FOUND IN cell-cell junction (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) 10 52368479 52399213 - 30032202 116910866 MODEL JAAIVD010000005;XM_032914627;XM_032914628 XP_032770518;XP_032770519 protein-coding 625906785 Psmb1 proteasome 20S subunit beta 1 ENCODES a protein that exhibits structural constituent of proteasome (ortholog); INVOLVED IN proteasomal protein catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); regulation of proteasomal protein catabolic process (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY, HYPOTONIA, AND ABSENT LANGUAGE (ortholog); osteoarthritis (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 14 496850 514118 + 22301074 116883875 MODEL JAAIVD010000009;XM_032885141 XP_032741032 proteasome subunit beta type-1 protein-coding 625906795 Itpripl1 ITPRIP like 1 ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN calcium ion import (ortholog); negative regulation of T cell receptor signaling pathway (ortholog); protein phosphorylation (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN plasma membrane (ortholog) 5 105966101 105969052 - 30032202 116901928 MODEL JAAIVD010000023;XM_032904151 XP_032760042 inositol 1,4,5-trisphosphate receptor-interacting protein-like 1 protein-coding 625906801 Rep15 RAB15 effector protein INVOLVED IN receptor recycling (ortholog); transferrin transport (ortholog); FOUND IN endosome membrane (ortholog); perinuclear region of cytoplasm (ortholog); recycling endosome (ortholog) 6 4702563 4703640 + 22301074;30032202 116904509 MODEL JAAIVD010000024;XM_032907299 XP_032763190 protein-coding 625906806 LOC116889609 lysine-specific demethylase 5D-like Y 1726802 1830170 - 22301074;30032202 116889609 MODEL JAAIVD010000015;XM_032890537 XP_032746428 protein-coding 625906837 A1bg alpha-1-B glycoprotein INVOLVED IN growth hormone receptor signaling pathway (ortholog); ASSOCIATED WITH Hepatomegaly (ortholog); schizophrenia (ortholog); FOUND IN extracellular region (ortholog) 1 237610238 237613956 + 30032202 116890116 MODEL JAAIVD010000025;XM_032890857 XP_032746748 alpha-1B-glycoprotein protein-coding 625906849 Chid1 chitinase domain containing 1 ENCODES a protein that exhibits oligosaccharide binding (ortholog); INVOLVED IN negative regulation of cytokine production involved in inflammatory response (ortholog); FOUND IN extracellular region (ortholog); late endosome (ortholog); lysosome (ortholog) 2 7954010 7990839 + 22301074;30032202 116890859 MODEL JAAIVD010000001;XM_032891425 XP_032747316 chitinase domain-containing protein 1 protein-coding 625906866 LOC116890623 U1 spliceosomal RNA 1 12328216 12328335 + 116890623 MODEL JAAIVD010000025 pseudo 625906867 LOC116906947 uncharacterized LOC116906947 8 11120529 11123508 + 116906947 MODEL JAAIVD010000027;XR_004388786 ncrna 625906872 Amacr alpha-methylacyl-CoA racemase ENCODES a protein that exhibits alpha-methylacyl-CoA racemase activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN bile acid biosynthetic process (ortholog); bile acid metabolic process (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; ASSOCIATED WITH adenoma (ortholog); alpha-methylacyl-CoA racemase deficiency (ortholog); breast carcinoma (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); peroxisome (ortholog) 3 169765827 169777832 - 30032202 116897123 MODEL JAAIVD010000012;XM_032898779 XP_032754670 protein-coding 625906881 LOC116901697 olfactory receptor 50-like 5 82019622 82020560 + 22301074;30032202 116901697 MODEL JAAIVD010000023;XM_032903826 XP_032759717 protein-coding 625906884 Avpr1a arginine vasopressin receptor 1A ENCODES a protein that exhibits peptide hormone binding (ortholog); V1A vasopressin receptor binding (ortholog); vasopressin receptor activity (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cellular response to water deprivation (ortholog); G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; vasopressin signaling pathway; vasopressin signaling pathway via receptor type 1; ASSOCIATED WITH acute kidney failure (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN endocytic vesicle (ortholog); endosome (ortholog); plasma membrane (ortholog) 1 200862371 200867184 + 22301074;30032202 116890036 MODEL JAAIVD010000025;XM_032890810 XP_032746701 vasopressin V1a receptor protein-coding 625906890 Trnad-guc transfer RNA aspartic acid (anticodon GUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 13 43596917 43596988 + 116915201 MODEL JAAIVD010000008 trna 625906891 LOC116888861 uncharacterized LOC116888861 1 107187111 107191353 - 116888861 MODEL JAAIVD010000025;XR_004386350 ncrna 625906896 Liat1 ligand of ATE1 ENCODES a protein that exhibits molecular condensate scaffold activity (ortholog); INVOLVED IN membraneless organelle assembly (ortholog); protein arginylation (ortholog); FOUND IN nucleolus (ortholog) 9 94723602 94727498 + 30032202 116909612 MODEL JAAIVD010000002;XM_032913235 XP_032769126 C9H17orf97 chromosome 9 C17orf97 homolog;protein LIAT1 protein-coding 625906902 LOC116891415 deleted in malignant brain tumors 1 protein 2 70963056 71038566 - 22301074;30032202 116891415 MODEL JAAIVD010000001;XM_032892441 XP_032748332 protein-coding 625906944 Rps2 ribosomal protein S2 ENCODES a protein that exhibits enzyme binding (ortholog); fibroblast growth factor binding (ortholog); mRNA binding (ortholog); INVOLVED IN cellular response to interleukin-4 (ortholog); formation of translation preinitiation complex (ortholog); positive regulation of ubiquitin-protein transferase activity (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH atrial fibrillation (ortholog); epilepsy (ortholog); Hypoxia (ortholog); FOUND IN cytosolic ribosome (ortholog); cytosolic small ribosomal subunit (ortholog); nucleolus (ortholog) 9 2006441 2008186 + 22301074;30032202 116909691 MODEL JAAIVD010000002;XM_032913353 XP_032769244 40S ribosomal protein S2 protein-coding 625906954 LOC116906367 small nucleolar RNA SNORD113/SNORD114 family 7 127251496 127251570 + 116906367 MODEL JAAIVD010000026;XR_004388636 snorna 625906957 LOC116888901 uncharacterized LOC116888901 X 128033800 128035129 + 116888901 MODEL JAAIVD010000014;XR_004386355 ncrna 625906962 LOC116895281 ankyrin repeat and SOCS box protein 17 3 7792365 7803869 - 22301074 116895281 MODEL JAAIVD010000012;XM_032896596 XP_032752487 protein-coding 625906969 Khdrbs3 KH RNA binding domain containing, signal transduction associated 3 ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); RNA binding (ortholog); INVOLVED IN mRNA processing (ortholog); positive regulation of RNA splicing (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) 1 242348296 242497980 + 30032202 116912328 MODEL JAAIVD010000025;XM_032916369;XM_032916380;XR_004389447 XP_032772260;XP_032772271 KH domain-containing, RNA-binding, signal transduction-associated protein 3 protein-coding 625906990 Bag4 BAG cochaperone 4 ENCODES a protein that exhibits protein-containing complex binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); cellular response to tumor necrosis factor (ortholog); negative regulation of mRNA modification (ortholog); PARTICIPATES IN ceramide signaling pathway; tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH pancreatic cancer (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog); plasma membrane (ortholog) 13 60713289 60733770 + 22301074;30032202 116914277 MODEL JAAIVD010000008;XM_032918500 XP_032774391 BAG family molecular chaperone regulator 4 protein-coding 625906999 Sltm SAFB like transcription modulator ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) 8 64889890 64935140 + 22301074;30032202 116908065 MODEL JAAIVD010000027;XM_032911334;XM_032911335;XM_032911336;XM_032911337;XM_032911338 XP_032767225;XP_032767226;XP_032767227;XP_032767228;XP_032767229 SAFB-like transcription modulator protein-coding 625907031 LOC116905540 uncharacterized LOC116905540 7 8036465 8039712 - 116905540 MODEL JAAIVD010000026;XR_004388550 ncrna 625907035 Rbis ribosomal biogenesis factor INVOLVED IN ribosome biogenesis (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 3 157579468 157585833 + 22301074;30032202 116897084 MODEL JAAIVD010000012;XM_032898709;XM_032898710 XP_032754600;XP_032754601 protein-coding 625907048 LOC116910948 matrin-3-like 10 79980290 80014155 - 116910948 MODEL JAAIVD010000005 pseudo 625907049 Lilra5 leukocyte immunoglobulin like receptor A5 INVOLVED IN negative regulation of interleukin-12 production (ortholog); negative regulation of interleukin-13 production (ortholog); positive regulation of calcium ion transport (ortholog); ASSOCIATED WITH systemic juvenile rheumatoid arthritis (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog) 2 176722113 176726904 + 30032202 116892648 MODEL JAAIVD010000001;XM_032894468 XP_032750359 leukocyte immunoglobulin-like receptor subfamily A member 5 protein-coding 625907059 LOC116906302 60S ribosomal protein L7-like 7 28932428 28933289 - 116906302 MODEL JAAIVD010000026;XR_004388592 pseudo 625907062 Tlcd3b TLC domain containing 3B ENCODES a protein that exhibits sphingosine N-acyltransferase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); negative regulation of fat cell differentiation (ortholog); ASSOCIATED WITH cone-rod dystrophy 22 (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) 2 75065704 75072629 - 22301074;30032202 116891504 MODEL JAAIVD010000001;XM_032892636 XP_032748527 ceramide synthase protein-coding 625907071 LOC116900931 low-density lipoprotein receptor class A domain-containing protein 3-like 5 79880696 80022222 - 22301074;30032202 116900931 MODEL JAAIVD010000023;XM_032902579 XP_032758470 protein-coding 625907079 Kif26a kinesin family member 26A ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); microtubule binding (ortholog); microtubule motor activity (ortholog); INVOLVED IN cerebral cortex development (ortholog); enteric nervous system development (ortholog); microtubule-based movement (ortholog); ASSOCIATED WITH complex cortical dysplasia with other brain malformations 11 (ortholog) 7 129747185 129782832 + 22301074;30032202 116905511 MODEL JAAIVD010000026;XM_032908532;XM_032908533 XP_032764423;XP_032764424 kinesin-like protein KIF26A protein-coding 625907102 Trnaa-agc transfer RNA alanine (anticodon AGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41403137 41403208 + 116884179 MODEL JAAIVD010000009 trna 625907103 LOC116897391 U1 spliceosomal RNA 3 60833937 60834101 + 116897391 MODEL JAAIVD010000012;XR_004387435 snrna 625907106 Dnase2 deoxyribonuclease 2, lysosomal ENCODES a protein that exhibits deoxyribonuclease II activity (ortholog); DNA endonuclease activity (ortholog); INVOLVED IN apoptotic cell clearance (ortholog); DNA catabolic process (ortholog); ASSOCIATED WITH AUTOINFLAMMATORY-PANCYTOPENIA SYNDROME (ortholog); Experimental Arthritis (ortholog); rheumatoid arthritis (ortholog); FOUND IN lysosome (ortholog) 17 15377954 15380810 - 22301074;30032202 116886533 MODEL JAAIVD010000011;XM_032888054 XP_032743945 deoxyribonuclease-2-alpha protein-coding 625907116 LOC116904792 small nucleolar RNA U85 6 22713976 22714303 + 116904792 MODEL JAAIVD010000024;XR_004388454 snorna 625907119 Mrm3 mitochondrial rRNA methyltransferase 3 ENCODES a protein that exhibits identical protein binding (ortholog); rRNA (guanosine-2'-O-ribose)-methyltransferase activity (ortholog); INVOLVED IN mitochondrial large ribosomal subunit assembly (ortholog); rRNA processing (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 9 94949954 94957975 + 22301074;30032202 116910495 MODEL JAAIVD010000002;XM_032914386;XM_032914387;XM_032914388 XP_032770277;XP_032770278;XP_032770279 rRNA methyltransferase 3, mitochondrial protein-coding 625907134 LOC116884314 serine protease inhibitor Kazal-type 10-like 15 68565221 68576064 + 22301074 116884314 MODEL JAAIVD010000010;XM_032885423 XP_032741314 protein-coding 625907143 Slc22a2 solute carrier family 22 member 2 ENCODES a protein that exhibits acetylcholine transmembrane transporter activity (ortholog); amine transmembrane transporter activity (ortholog); choline transmembrane transporter activity (ortholog); INVOLVED IN acetylcholine transport (ortholog); amine transport (ortholog); amino acid import across plasma membrane (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH acute kidney failure (ortholog); end stage renal disease (ortholog); Endotoxemia (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) 2 191317250 191359015 + 22301074;30032202 116894630 MODEL JAAIVD010000001;XM_032896348 XP_032752239 protein-coding 625907158 Abcb11 ATP binding cassette subfamily B member 11 ENCODES a protein that exhibits ABC-type bile acid transporter activity (ortholog); ABC-type xenobiotic transporter activity (ortholog); bile acid transmembrane transporter activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); bile acid metabolic process (ortholog); canalicular bile acid transport (ortholog); PARTICIPATES IN statin pharmacokinetics pathway; ASSOCIATED WITH alcoholic hepatitis (ortholog); benign recurrent intrahepatic cholestasis 2 (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) 5 46561712 46657009 - 22301074 116900188 MODEL JAAIVD010000023;XM_032901948;XM_032901949 XP_032757839;XP_032757840 bile salt export pump protein-coding 625907194 LOC116904118 dead end protein homolog 1-like 6 136011329 136013054 - 116904118 MODEL JAAIVD010000024 pseudo 625907195 LOC116891434 60S ribosomal protein L21-like 2 73497312 73497795 - 116891434 MODEL JAAIVD010000001 pseudo 625907196 LOC116914865 uncharacterized LOC116914865 13 61040527 61041466 - 116914865 MODEL JAAIVD010000008;XR_004389780 ncrna 625907200 LOC116906769 EH domain-containing protein 3-like 8 20828125 20830313 + 116906769 MODEL JAAIVD010000027;XR_004388769 pseudo 625907203 Ndufb4 NADH:ubiquinone oxidoreductase subunit B4 FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) 4 22624523 22631015 - 22301074;30032202 116898834 MODEL JAAIVD010000003;XM_032900187 XP_032756078 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 protein-coding 625907210 LOC116909098 N-lysine methyltransferase KMT5A-like 9 29349265 29350226 + 22301074 116909098 MODEL JAAIVD010000002;XM_032912570 XP_032768461 protein-coding 625907214 Slc1a2 solute carrier family 1 member 2 ENCODES a protein that exhibits cysteine transmembrane transporter activity (ortholog); glutamate:sodium symporter activity (ortholog); high-affinity L-glutamate transmembrane transporter activity (ortholog); INVOLVED IN adult behavior (ortholog); cellular response to cocaine (ortholog); D-aspartate import across plasma membrane (ortholog); PARTICIPATES IN amyotrophic lateral sclerosis pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); Alzheimer's disease (ortholog); FOUND IN astrocyte projection (ortholog); axolemma (ortholog); axon (ortholog) 5 80500333 80619335 + 30032202 116901680 MODEL JAAIVD010000023;XM_032903794;XM_032903795 XP_032759685;XP_032759686 excitatory amino acid transporter 2 protein-coding 625907234 Wdr76 WD repeat domain 76 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN DNA damage response (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN heterochromatin (ortholog); nucleus (ortholog); site of DNA damage (ortholog) 5 99635000 99668414 + 22301074;30032202 116901868 MODEL JAAIVD010000023;XM_032904069;XM_032904070;XM_032904071;XM_032904072;XM_032904073;XM_032904074;XM_032904075 XP_032759960;XP_032759961;XP_032759962;XP_032759963;XP_032759964;XP_032759965;XP_032759966 WD repeat-containing protein 76 protein-coding 625907267 LOC116897070 reticulophagy regulator 1-like 3 154970196 154972015 - 30032202 116897070 MODEL JAAIVD010000012;XM_032898693;XM_032898694;XM_032898695 XP_032754584;XP_032754585;XP_032754586 protein-coding 625907278 Atp6v1c2 ATPase H+ transporting V1 subunit C2 ENCODES a protein that exhibits identical protein binding (ortholog); proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN positive regulation of Wnt signaling pathway (ortholog); ASSOCIATED WITH Distal Renal Tubular Acidosis (ortholog) 7 37082926 37122763 - 22301074;30032202 116904899 MODEL JAAIVD010000026;XM_032907507 XP_032763398 V-type proton ATPase subunit C 2 protein-coding 625907296 Stab1 stabilin 1 ENCODES a protein that exhibits low-density lipoprotein particle binding (ortholog); low-density lipoprotein particle receptor activity (ortholog); scavenger receptor activity (ortholog); INVOLVED IN cell-cell signaling (ortholog); defense response to bacterium (ortholog); negative regulation of angiogenesis (ortholog); ASSOCIATED WITH ISOLATED HYPERFERRITINEMIA (ortholog); systemic juvenile rheumatoid arthritis (ortholog); FOUND IN plasma membrane (ortholog) 13 6836964 6867828 - 22301074 116914756 MODEL JAAIVD010000008;XM_032919206 XP_032775097 stabilin-1 protein-coding 625907369 Arhgef19 Rho guanine nucleotide exchange factor 19 INVOLVED IN positive regulation of GTPase activity (ortholog); regulation of actin cytoskeleton organization (ortholog); wound healing (ortholog) 1 16895006 16913656 - 22301074;30032202 116893382 MODEL JAAIVD010000025;XM_032895181;XM_032895185;XM_032895187 XP_032751072;XP_032751076;XP_032751078 protein-coding 625907396 LOC116898205 histone H2A.Z-like 4 138928488 138929037 - 116898205 MODEL JAAIVD010000003 pseudo 625907397 LOC116906469 small nucleolar RNA SNORA17 7 69606428 69606555 - 116906469 MODEL JAAIVD010000026;XR_004388722 snorna 625907400 LOC116910653 small nucleolar RNA SNORD42 9 92255877 92255945 + 116910653 MODEL JAAIVD010000002;XR_004389187 snorna 625907403 LOC116887230 nucleoside diphosphate kinase B-like 18 793236 793876 + 22301074;30032202 116887230 MODEL JAAIVD010000013;XM_032888792 XP_032744683 protein-coding 625907408 Adgrf5 adhesion G protein-coupled receptor F5 INVOLVED IN energy reserve metabolic process (ortholog); erythrocyte development (ortholog); fat cell differentiation (ortholog); FOUND IN apical part of cell (ortholog); cell surface (ortholog); cytoplasmic vesicle (ortholog) 4 86383257 86479562 - 22301074 116899150 MODEL JAAIVD010000003;XM_032900703 XP_032756594 protein-coding 625907433 LOC116907711 putative olfactory receptor 10D4 8 82684376 82685356 + 22301074 116907711 MODEL JAAIVD010000027;XM_032910836 XP_032766727 protein-coding 625907436 LOC116905031 SUMO-conjugating enzyme UBC9-like 7 64818696 64819635 + 116905031 MODEL JAAIVD010000026 pseudo 625907437 Adamtsl2 ADAMTS like 2 ENCODES a protein that exhibits microfibril binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); lobar bronchus epithelium development (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); ASSOCIATED WITH acromicric dysplasia (ortholog); Congenital Hand Deformities (ortholog); Contracture (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) 5 9549374 9577327 - 22301074;30032202 116901244 MODEL JAAIVD010000023;XM_032902994 XP_032758885 ADAMTS-like protein 2 protein-coding 625907458 LOC116884358 ral guanine nucleotide dissociation stimulator-like 15 39231341 39233002 + 116884358 MODEL JAAIVD010000010;XM_032885485 XP_032741376 protein-coding 625907463 LOC116900478 olfactory receptor 4C5-like 5 71586225 71587195 + 22301074 116900478 MODEL JAAIVD010000023;XM_032902214 XP_032758105 protein-coding 625907467 Trnal-uaa transfer RNA leucine (anticodon UAA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 12104775 12104857 - 116895139 MODEL JAAIVD010000001 trna 625907468 Tubgcp6 tubulin gamma complex component 6 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN microtubule nucleation (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); microcephaly (ortholog); FOUND IN centrosome (ortholog); gamma-tubulin ring complex (ortholog) 1 258406354 258426993 - 22301074;30032202 116914948 MODEL JAAIVD010000025;XM_032919370 XP_032775261 gamma-tubulin complex component 6;tubulin gamma complex associated protein 6 protein-coding 625907498 LOC116908631 uncharacterized LOC116908631 9 67690494 67692703 + 116908631 MODEL JAAIVD010000002;XR_004389004 ncrna 625907503 Pid1 phosphotyrosine interaction domain containing 1 INVOLVED IN cellular response to cytokine stimulus (ortholog); cellular response to fatty acid (ortholog); cellular response to interleukin-6 (ortholog); ASSOCIATED WITH asthma (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN cytoplasm (ortholog) 4 156765955 156991487 - 30032202 116899571 MODEL JAAIVD010000003;XM_032901486 XP_032757377 PTB-containing, cubilin and LRP1-interacting protein protein-coding 625907510 LOC116899826 small nucleolar RNA SNORA38 4 83459399 83459523 + 116899826 MODEL JAAIVD010000003;XR_004387826 snorna 625907513 Jade1 jade family PHD finger 1 ENCODES a protein that exhibits histone H3K14 acetyltransferase activity (ortholog); histone H4K12 acetyltransferase activity (ortholog); histone H4K16 acetyltransferase activity (ortholog); INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of G1/S transition of mitotic cell cycle (ortholog); regulation of cell cycle (ortholog); FOUND IN ciliary basal body (ortholog); cytoplasm (ortholog); cytosol (ortholog) 3 112341264 112395211 - 30032202 116896903 MODEL JAAIVD010000012;XM_032898454;XM_032898455;XM_032898456;XM_032898457 XP_032754345;XP_032754346;XP_032754347;XP_032754348 protein Jade-1 protein-coding 625907537 Ren renin ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); endopeptidase activity (ortholog); insulin-like growth factor receptor binding (ortholog); INVOLVED IN angiotensin maturation (ortholog); cell maturation (ortholog); cellular response to xenobiotic stimulus (ortholog); PARTICIPATES IN benazepril pharmacodynamics pathway; candesartan pharmacodynamics pathway; captopril pharmacodynamics pathway; ASSOCIATED WITH acute kidney failure (ortholog); Albuminuria (ortholog); anemia (ortholog); FOUND IN apical part of cell (ortholog); extracellular region (ortholog) 10 2484573 2494899 - 22301074;30032202 116911244 MODEL JAAIVD010000005;XM_032915146 XP_032771037 protein-coding 625907550 LOC116914101 small nucleolar RNA U6-53/MBII-28 12 71680157 71680266 + 116914101 MODEL JAAIVD010000007;XR_004389669 snorna 625907553 LOC116893269 vomeronasal type-1 receptor 2-like 2 143720971 143721817 + 116893269 MODEL JAAIVD010000001 pseudo 625907554 Map3k5 mitogen-activated protein kinase kinase kinase 5 ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); JUN kinase kinase kinase activity (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); cellular response to amino acid starvation (ortholog); cellular response to hydrogen peroxide (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; p38 MAPK signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Arterial Injury (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); external side of plasma membrane (ortholog) 2 216449154 216650582 - 22301074;30032202 116892976 MODEL JAAIVD010000001;XM_032894935 XP_032750826 protein-coding 625907588 Rnf123 ring finger protein 123 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN protein maturation (ortholog); protein polyubiquitination (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH hypertrophic cardiomyopathy (ortholog); FOUND IN cytoplasm (ortholog) 8 99380171 99408757 - 22301074;30032202 116907566 MODEL JAAIVD010000027;XM_032910590 XP_032766481 E3 ubiquitin-protein ligase RNF123 protein-coding 625907631 LOC116903563 N-acetyltransferase family 8 member 2-like 6 60420989 60423490 + 116903563 MODEL JAAIVD010000024;XR_004388286 pseudo 625907634 LOC116910092 60S ribosomal protein L7a-like 9 12052563 12053357 - 116910092 MODEL JAAIVD010000002 pseudo 625907635 LOC116892773 aurora kinase B-like 2 183014127 183015051 + 116892773 MODEL JAAIVD010000001 pseudo 625907636 Actl9 actin like 9 INVOLVED IN acrosome assembly (ortholog); fertilization (ortholog); ASSOCIATED WITH atopic dermatitis (ortholog); spermatogenic failure 53 (ortholog); FOUND IN acrosomal vesicle (ortholog); perinuclear theca (ortholog); sperm head (ortholog) 1 158963288 158964647 - 30032202 116889891 MODEL JAAIVD010000025;XM_032890716 XP_032746607 actin-like protein 9 protein-coding 625907641 LOC116906545 uncharacterized LOC116906545 8 31253340 31254574 + 116906545 MODEL JAAIVD010000027;XM_032909247 XP_032765138 uncharacterized protein LOC116906545 protein-coding 625907646 Lrrc8e leucine rich repeat containing 8 VRAC subunit E ENCODES a protein that exhibits volume-sensitive anion channel activity (ortholog); INVOLVED IN aspartate transmembrane transport (ortholog); cell volume homeostasis (ortholog); cellular response to osmotic stress (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); lysosomal membrane (ortholog) 16 2358743 2369627 + 22301074 116885747 MODEL JAAIVD010000004;XM_032887055;XM_032887056;XM_032887057 XP_032742946;XP_032742947;XP_032742948 volume-regulated anion channel subunit LRRC8E protein-coding 625907659 LOC116908147 actin-like protein 9 8 34386506 34387837 + 30032202 116908147 MODEL JAAIVD010000027;XM_032911442 XP_032767333 protein-coding 625907664 LOC116895759 ubiquitin-40S ribosomal protein S27a-like 3 43614580 43626936 - 116895759 MODEL JAAIVD010000012 pseudo 625907665 LOC116890239 40S ribosomal protein S10-like 1 271262022 271262513 + 116890239 MODEL JAAIVD010000025 pseudo 625907666 LOC116897404 U6 spliceosomal RNA 3 64945511 64945617 - 116897404 MODEL JAAIVD010000012;XR_004387447 snrna 625907669 Ints5 integrator complex subunit 5 INVOLVED IN regulation of transcription elongation by RNA polymerase II (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); snRNA processing (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); INTAC complex (ortholog) 2 9044693 9049504 - 30032202 116890917 MODEL JAAIVD010000001;XM_032891547 XP_032747438 protein-coding 625907675 LOC116883735 serine/threonine-protein phosphatase 2A catalytic subunit 14 25421156 25422073 - 116883735 MODEL JAAIVD010000009 pseudo 625907676 Il1rapl2 interleukin 1 receptor accessory protein like 2 INVOLVED IN regulation of presynapse assembly (ortholog); FOUND IN glutamatergic synapse (ortholog) X 90669433 90787672 - 22301074 116888081 MODEL JAAIVD010000014;XM_032889454 XP_032745345 X-linked interleukin-1 receptor accessory protein-like 2 protein-coding 625907685 Ddb1 damage specific DNA binding protein 1 ENCODES a protein that exhibits cullin family protein binding (ortholog); damaged DNA binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN biological process involved in interaction with symbiont (ortholog); cellular response to UV (ortholog); DNA damage response (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); communication disorder (ortholog); congenital heart disease (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog); Cul4B-RING E3 ubiquitin ligase complex (ortholog) 2 10086133 10111836 + 22301074;30032202 116890960 MODEL JAAIVD010000001;XM_032891619 XP_032747510 DNA damage-binding protein 1 protein-coding 625907716 Htatsf1 HIV-1 Tat specific factor 1 ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); poly-ADP-D-ribose modification-dependent protein binding (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); mRNA splicing, via spliceosome (ortholog); protein localization to site of double-strand break (ortholog); FOUND IN nucleoplasm (ortholog); site of double-strand break (ortholog); U2-type spliceosomal complex (ortholog) X 117471374 117485357 + 22301074;30032202 116888831 MODEL JAAIVD010000014;XM_032890106 XP_032745997 HIV Tat-specific factor 1 protein-coding 625907730 LOC116892236 sialic acid-binding Ig-like lectin 5 2 156119575 156127538 - 30032202 116892236 MODEL JAAIVD010000001;XM_032893807 XP_032749698 protein-coding 625907743 Tigd2 tigger transposable element derived 2 6 82665294 82668851 - 22301074;30032202 116903724 MODEL JAAIVD010000024;XM_032906405 XP_032762296 tigger transposable element-derived protein 2 protein-coding 625907749 Uap1l1 UDP-N-acetylglucosamine pyrophosphorylase 1 like 1 ASSOCIATED WITH COVID-19 (ortholog) 5 11818569 11823801 + 30032202 116901306 MODEL JAAIVD010000023;XM_032903108 XP_032758999 UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 protein-coding 625907762 Exoc6b exocyst complex component 6B ASSOCIATED WITH schizophrenia (ortholog); spondyloepimetaphyseal dysplasia with joint laxity type 3 (ortholog) 6 61180641 61626649 + 22301074;30032202 116903585 MODEL JAAIVD010000024;XM_032906207;XM_032906208;XM_032906209 XP_032762098;XP_032762099;XP_032762100 protein-coding 625907794 Micu1 mitochondrial calcium uptake 1 ENCODES a protein that exhibits calcium channel inhibitor activity (ortholog); calcium ion binding (ortholog); calcium ion sensor activity (ortholog); INVOLVED IN calcium import into the mitochondrion (ortholog); calcium ion import (ortholog); cellular response to calcium ion (ortholog); ASSOCIATED WITH basal ganglia disease (ortholog); COVID-19 (ortholog); genetic disease (ortholog); FOUND IN calcium channel complex (ortholog); mitochondrial crista junction (ortholog); mitochondrial inner membrane (ortholog) 18 25550106 25701046 + 22301074;30032202 116887548 MODEL JAAIVD010000013;XM_032889179;XM_032889180;XM_032889181 XP_032745070;XP_032745071;XP_032745072 calcium uptake protein 1, mitochondrial protein-coding 625907816 Kptn kaptin, actin binding protein ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to glucose starvation (ortholog); negative regulation of TORC1 signaling (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 41 (ortholog); COVID-19 (ortholog); genetic disease (ortholog); FOUND IN filamentous actin (ortholog); KICSTOR complex (ortholog); lamellipodium (ortholog) 2 172950842 172958781 - 30032202 116892608 MODEL JAAIVD010000001;XM_032894410 XP_032750301 KICSTOR complex protein kaptin protein-coding 625907832 St7l suppression of tumorigenicity 7 like INVOLVED IN negative regulation of cell growth (ortholog) 3 53187605 53245723 - 22301074 116896423 MODEL JAAIVD010000012;XM_032897569;XM_032897570 XP_032753460;XP_032753461 suppressor of tumorigenicity 7 protein-like protein-coding 625907853 Cdh24 cadherin 24 ENCODES a protein that exhibits alpha-catenin binding (ortholog); beta-catenin binding (ortholog); calcium ion binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); FOUND IN cell-cell junction (ortholog) 12 70361003 70369166 + 22301074;30032202 116913698 MODEL JAAIVD010000007;XM_032917994 XP_032773885 cadherin-24 protein-coding 625907869 LOC116889570 U6 spliceosomal RNA X 89001552 89001658 - 116889570 MODEL JAAIVD010000014;XR_004386487 snrna 625907872 LOC116909900 olfactory receptor 2AK2-like 9 39229252 39230172 + 22301074 116909900 MODEL JAAIVD010000002;XM_032913652 XP_032769543 protein-coding 625907875 Lzts2 leucine zipper tumor suppressor 2 INVOLVED IN kidney development (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH urinary system disease (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 44521649 44533259 + 30032202 116891218 MODEL JAAIVD010000001;XM_032892055 XP_032747946 leucine zipper putative tumor suppressor 2 protein-coding 625907884 Sox8 SRY-box transcription factor 8 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN adipose tissue development (ortholog); astrocyte fate commitment (ortholog); cell fate commitment (ortholog); ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); peripheral nervous system disease (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 9 2831427 2836438 - 30032202 116909929 MODEL JAAIVD010000002;XM_032913698 XP_032769589 transcription factor SOX-8 protein-coding 625907891 Fam91a1 family with sequence similarity 91 member A1 INVOLVED IN intracellular protein transport (ortholog); vesicle tethering to Golgi (ortholog); FOUND IN cytoplasmic vesicle (ortholog); trans-Golgi network (ortholog) 1 232962945 233002000 + 30032202 116911774 MODEL JAAIVD010000025;XM_032915769;XM_032915777 XP_032771660;XP_032771668 protein FAM91A1 protein-coding 625907922 Efna2 ephrin A2 ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN axon guidance (ortholog); bone remodeling (ortholog); ephrin receptor signaling pathway (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; FOUND IN neuromuscular junction (ortholog); perikaryon (ortholog) 1 154686763 154696948 - 22301074;30032202 116905277 MODEL JAAIVD010000025;XM_032908141 XP_032764032 ephrin-A2 protein-coding 625907930 LOC116889288 60S ribosomal protein L29-like 1 129584993 129585462 + 116889288 MODEL JAAIVD010000025 pseudo 625907931 LOC116911973 protein crumbs homolog 1-like 11 35985600 36101419 + 116911973 MODEL JAAIVD010000006 pseudo 625907932 Cdcp1 CUB domain containing protein 1 INVOLVED IN cell population proliferation (ortholog); establishment of protein localization (ortholog); hepatocyte growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH myoepithelioma (ortholog); substance-related disorder (ortholog) 8 114305416 114342511 - 116908021 MODEL JAAIVD010000027;XM_032911282;XM_032911283 XP_032767173;XP_032767174 CUB domain-containing protein 1 protein-coding 625907949 LOC116895704 uncharacterized LOC116895704 3 212307442 212329661 + 116895704 MODEL JAAIVD010000012;XR_004387305 ncrna 625907953 LOC116903993 uncharacterized LOC116903993 6 108203242 108235795 + 116903993 MODEL JAAIVD010000024;XR_004388322 ncrna 625907958 LOC116894864 U6 spliceosomal RNA 2 160140145 160140251 + 116894864 MODEL JAAIVD010000001;XR_004387077 snrna 625907961 A1cf APOBEC1 complementation factor ENCODES a protein that exhibits double-stranded RNA binding (ortholog); enzyme-substrate adaptor activity (ortholog); mRNA binding (ortholog); INVOLVED IN cytidine to uridine editing (ortholog); embryo implantation (ortholog); mRNA localization resulting in post-transcriptional regulation of gene expression (ortholog); ASSOCIATED WITH gout (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN apolipoprotein B mRNA editing enzyme complex (ortholog); cytoplasm (ortholog); heterochromatin (ortholog) 2 31927645 32003384 + 30032202 116891086 MODEL JAAIVD010000001;XM_032891800;XM_032891801 XP_032747691;XP_032747692 protein-coding 625907979 LOC116890309 U4 spliceosomal RNA 1 218072841 218072976 + 116890309 MODEL JAAIVD010000025;XR_004386538 snrna 625907982 Adhfe1 alcohol dehydrogenase iron containing 1 ENCODES a protein that exhibits hydroxyacid-oxoacid transhydrogenase activity (ortholog); INVOLVED IN ketone body catabolic process (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 1 144293382 144319687 + 22301074;30032202 116903818 MODEL JAAIVD010000025;XM_032906528 XP_032762419 hydroxyacid-oxoacid transhydrogenase, mitochondrial protein-coding 625908000 Chmp6 charged multivesicular body protein 6 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); late endosome to lysosome transport (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); endosome membrane (ortholog) 9 64098428 64104141 - 30032202 116909946 MODEL JAAIVD010000002;XM_032913721 XP_032769612 protein-coding 625908012 LOC116895189 activated RNA polymerase II transcriptional coactivator p15-like 3 185347949 185348624 - 116895189 MODEL JAAIVD010000012 pseudo 625908013 Mmp23b matrix metallopeptidase 23B ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); ASSOCIATED WITH COVID-19 (ortholog) 1 5043224 5046012 + 22301074;30032202 116886008 MODEL JAAIVD010000025;XM_032887316;XM_032887317;XM_032887322 XP_032743207;XP_032743208;XP_032743213 matrix metalloproteinase-23 protein-coding 625908032 LOC116890223 60S ribosomal protein L23-like 1 262253609 262254032 - 116890223 MODEL JAAIVD010000025 pseudo 625908033 LOC116897265 uncharacterized LOC116897265 3 199098258 199104620 - 116897265 MODEL JAAIVD010000012;XR_004387409 ncrna 625908039 LOC116910943 zinc finger protein 2 homolog 10 75882009 75900530 + 30032202 116910943 MODEL JAAIVD010000005;XM_032914682 XP_032770573 protein-coding 625908045 Ccm2 CCM2 scaffold protein INVOLVED IN blood vessel development (ortholog); blood vessel endothelial cell differentiation (ortholog); cell-cell junction organization (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; ASSOCIATED WITH cavernous hemangioma (ortholog); Central Nervous System Vascular Malformations (ortholog); cerebral cavernous malformation (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) 11 75478250 75527783 + 30032202 116912124 MODEL JAAIVD010000006;XM_032916033 XP_032771924 cerebral cavernous malformations 2 protein protein-coding 625908059 Prex2 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); dendrite morphogenesis (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH arteriovenous malformations of the brain (ortholog); cholangiocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog) 1 145671779 145881074 + 22301074 116904948 MODEL JAAIVD010000025;XM_032907637 XP_032763528 phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 2 protein protein-coding 625908096 Tnpo1 transportin 1 INVOLVED IN protein import into nucleus (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 3 197670145 197756728 + 22301074;30032202 116897252 MODEL JAAIVD010000012;XM_032898983;XM_032898984;XM_032898985;XR_004387406 XP_032754874;XP_032754875;XP_032754876 transportin-1 protein-coding 625908132 Trnak-uuu transfer RNA lysine (anticodon UUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 1 271604613 271604685 + 116890639 MODEL JAAIVD010000025 trna 625908133 LOC116893376 uncharacterized LOC116893376 2 166426211 166512802 + 116893376 MODEL JAAIVD010000001;XM_032895176 XP_032751067 uncharacterized protein LOC116893376 protein-coding 625908139 LOC116911041 zinc finger protein 431-like 1 215711991 215766557 + 30032202 116911041 MODEL JAAIVD010000025;XM_032914791;XM_032914799;XM_032914807 XP_032770682;XP_032770690;XP_032770698 protein-coding 625908152 LOC116887109 keratin-associated protein 10-8-like 18 1082059 1082700 - 22301074;30032202 116887109 MODEL JAAIVD010000013;XM_032888646 XP_032744537 protein-coding 625908155 Fech ferrochelatase ENCODES a protein that exhibits heme binding (ortholog); identical protein binding (ortholog); iron ion binding (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cholesterol metabolic process (ortholog); detection of UV (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; heme biosynthetic pathway; ASSOCIATED WITH bile duct disease (ortholog); colon adenocarcinoma (ortholog); cutaneous porphyria (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrial membrane (ortholog) 15 66782506 66815168 + 22301074;30032202 116884532 MODEL JAAIVD010000010;XM_032885667 XP_032741558 ferrochelatase, mitochondrial protein-coding 625908170 Tgfb1 transforming growth factor beta 1 ENCODES a protein that exhibits cytokine activity (ortholog); enzyme binding (ortholog); growth factor activity (ortholog); INVOLVED IN adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains (ortholog); animal organ regeneration (ortholog); aortic valve morphogenesis (ortholog); PARTICIPATES IN altered transforming growth factor-beta Smad dependent signaling pathway; colorectal cancer pathway; glypican signaling pathway; ASSOCIATED WITH acromicric dysplasia (ortholog); actinic keratosis (ortholog); acute kidney failure (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); cytoplasm (ortholog) 2 169090515 169108146 - 22301074;30032202 116892450 MODEL JAAIVD010000001;XM_032894155 XP_032750046 transforming growth factor beta-1 proprotein protein-coding 625908181 Liph lipase H ENCODES a protein that exhibits glycerophospholipase activity (ortholog); heparin binding (ortholog); INVOLVED IN lipid catabolic process (ortholog); ASSOCIATED WITH familial woolly hair syndrome (ortholog); genetic disease (ortholog); hypotrichosis (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) 4 6628368 6676762 - 22301074;30032202 116898714 MODEL JAAIVD010000003;XM_032900004 XP_032755895 lipase member H protein-coding 625908195 Hs1bp3 HCLS1 binding protein 3 INVOLVED IN regulation of apoptotic process (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrion (ortholog) 7 28652983 28683854 + 22301074 116906297 MODEL JAAIVD010000026;XM_032909191 XP_032765082 HCLS1-binding protein 3 protein-coding 625908206 LOC116904947 palmitoyl-protein thioesterase 1-like 1 35518881 35540967 + 116904947 MODEL JAAIVD010000025;XM_032907984 XP_032763875 protein-coding 625908216 Kcnk5 potassium two pore domain channel subfamily K member 5 ENCODES a protein that exhibits outward rectifier potassium channel activity (ortholog); potassium channel activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN potassium ion export across plasma membrane (ortholog); potassium ion import across plasma membrane (ortholog); potassium ion transport (ortholog); ASSOCIATED WITH status epilepticus (ortholog) 12 89947272 89989288 - 22301074;30032202 116913649 MODEL JAAIVD010000007;XM_032917918 XP_032773809 potassium channel subfamily K member 5 protein-coding 625908225 Srek1 splicing regulatory glutamic acid and lysine rich protein 1 FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog) 3 193581483 193616921 + 22301074;30032202 116897236 MODEL JAAIVD010000012;XM_032898961;XM_032898962;XM_032898963;XM_032898964 XP_032754852;XP_032754853;XP_032754854;XP_032754855 splicing regulatory glutamine/lysine-rich protein 1 protein-coding 625908252 Sptan1 spectrin alpha, non-erythrocytic 1 ENCODES a protein that exhibits protein-containing complex binding (ortholog); spectrin binding (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal dominant distal hereditary motor neuronopathy 11 (ortholog); benign epilepsy with centrotemporal spikes (ortholog); FOUND IN cortical cytoskeleton (ortholog); cuticular plate (ortholog); fascia adherens (ortholog) 5 6701511 6766710 - 22301074;30032202 116901203 MODEL JAAIVD010000023;XM_032902912 XP_032758803 spectrin alpha chain, non-erythrocytic 1 protein-coding 625908314 LOC116886781 U4 spliceosomal RNA 17 41212810 41212951 - 116886781 MODEL JAAIVD010000011;XR_004386175 snrna 625908317 Numb NUMB endocytic adaptor protein ENCODES a protein that exhibits alpha-catenin binding (ortholog); beta-catenin binding (ortholog); cadherin binding (ortholog); INVOLVED IN adherens junction organization (ortholog); axonogenesis (ortholog); forebrain development (ortholog); PARTICIPATES IN altered Notch signaling pathway; altered Notch signaling pathway involving the macromolecules modifying the main players; Notch signaling pathway; FOUND IN apical part of cell (ortholog); basolateral plasma membrane (ortholog); clathrin-coated pit (ortholog) 7 97886171 98009299 - 30032202 116905253 MODEL JAAIVD010000026;XM_032908100;XM_032908101;XM_032908102;XM_032908103;XM_032908104;XM_032908105 XP_032763991;XP_032763992;XP_032763993;XP_032763994;XP_032763995;XP_032763996 protein numb homolog protein-coding 625908345 LOC116909479 olfactory receptor 10-like 9 32057735 32058670 + 22301074 116909479 MODEL JAAIVD010000002;XM_032913072 XP_032768963 protein-coding 625908348 Vdac3 voltage dependent anion channel 3 ENCODES a protein that exhibits voltage-gated monoatomic ion channel activity (ortholog); INVOLVED IN behavioral fear response (ortholog); chemical synaptic transmission (ortholog); learning (ortholog); FOUND IN membrane (ortholog); mitochondrion (ortholog); synaptic vesicle (ortholog) 13 63834651 63851037 + 22301074;30032202 116914393 MODEL JAAIVD010000008;XM_032918610;XM_032918611 XP_032774501;XP_032774502 voltage-dependent anion-selective channel protein 3 protein-coding 625908365 Gspt1 G1 to S phase transition 1 ENCODES a protein that exhibits GTPase activity (ortholog); translation release factor activity (ortholog); INVOLVED IN protein methylation (ortholog); regulation of translational termination (ortholog); translational termination (ortholog); PARTICIPATES IN translation termination pathway; FOUND IN cytosolic ribosome (ortholog); translation release factor complex (ortholog) 9 11033071 11067153 - 22301074;30032202 116908551 MODEL JAAIVD010000002;XM_032911754;XM_032911755 XP_032767645;XP_032767646 eukaryotic peptide chain release factor GTP-binding subunit ERF3A protein-coding 625908389 LOC116906009 60S ribosomal protein L36-like 7 23750899 23751339 + 116906009 MODEL JAAIVD010000026 pseudo 625908390 LOC116892405 IgGFc-binding protein-like 2 167818421 167856625 - 22301074 116892405 MODEL JAAIVD010000001;XM_032894083 XP_032749974 protein-coding 625908413 Bmpr2 bone morphogenetic protein receptor type 2 ENCODES a protein that exhibits activin receptor activity, type II (ortholog); BMP binding (ortholog); BMP receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); anterior/posterior pattern specification (ortholog); aortic valve development (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH asthma (ortholog); Brain Injuries (ortholog); Breast Neoplasms (ortholog); FOUND IN adherens junction (ortholog); apical plasma membrane (ortholog); axon (ortholog) 5 6478453 6586665 - 22301074;30032202 116901200 MODEL JAAIVD010000023;XM_032902905 XP_032758796 bone morphogenetic protein receptor type-2 protein-coding 625908430 Pcsk4 proprotein convertase subtilisin/kexin type 4 INVOLVED IN acrosome reaction (ortholog); binding of sperm to zona pellucida (ortholog); fertilization (ortholog); ASSOCIATED WITH colorectal adenocarcinoma (ortholog); FOUND IN acrosomal membrane (ortholog); acrosomal vesicle (ortholog) 1 154552363 154560389 + 22301074;30032202 116905172 MODEL JAAIVD010000025;XM_032907950 XP_032763841 protein-coding 625908448 LOC116884899 transketolase-like 15 3025898 3027765 + 116884899 MODEL JAAIVD010000010 pseudo 625908449 Evi2a ecotropic viral integration site 2A FOUND IN plasma membrane (ortholog) 9 90909040 90913041 + 22301074;30032202 116908511 MODEL JAAIVD010000002;XM_032911685 XP_032767576 protein EVI2A protein-coding 625908455 LOC116893431 vomeronasal type-2 receptor 116-like 2 175582991 175583896 + 116893431 MODEL JAAIVD010000001 pseudo 625908456 Tmeff2 transmembrane protein with EGF like and two follistatin like domains 2 INVOLVED IN negative regulation of cell migration (ortholog); negative regulation of integrin biosynthetic process (ortholog); negative regulation of stress fiber assembly (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); polycystic ovary syndrome (ortholog); prostate cancer (ortholog) 4 124258384 124526223 - 22301074;30032202 116899380 MODEL JAAIVD010000003;XM_032901096;XM_032901097 XP_032756987;XP_032756988 tomoregulin-2 protein-coding 625908472 LOC116884868 protocadherin beta-16-like 15 1104649 1119488 + 22301074 116884868 MODEL JAAIVD010000010;XM_032886107;XM_032886108;XM_032886109 XP_032741998;XP_032741999;XP_032742000 protocadherin beta-13-like protein-coding 625908486 Rab4a RAB4A, member RAS oncogene family ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); G protein activity (ortholog); INVOLVED IN antigen processing and presentation (ortholog); neurotransmitter receptor transport postsynaptic membrane to endosome (ortholog); protein transport (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; Rab family mediated signaling pathway; FOUND IN cytoplasm (ortholog); endosome (ortholog); extracellular exosome (ortholog) 17 43352208 43380803 + 22301074;30032202 116886315 MODEL JAAIVD010000011;XM_032887757;XM_032887758 XP_032743648;XP_032743649 ras-related protein Rab-4A protein-coding 625908502 LOC116884123 U6 spliceosomal RNA 14 51785260 51785370 + 116884123 MODEL JAAIVD010000009;XR_004385853 snrna 625908505 Arfgap3 ARF GTPase activating protein 3 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN presynaptic endocytosis (ortholog); protein secretion (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); photoreceptor ribbon synapse (ortholog) 1 252705643 252755452 - 22301074;30032202 116914410 MODEL JAAIVD010000025;XM_032918671;XM_032918681;XM_032918690;XM_032918699 XP_032774562;XP_032774572;XP_032774581;XP_032774590 ADP ribosylation factor GTPase activating protein 3;ADP-ribosylation factor GTPase-activating protein 3 protein-coding 625908530 LOC116912761 importin subunit alpha-4-like 11 19252590 19254145 - 116912761 MODEL JAAIVD010000006 pseudo 625908531 Ociad2 OCIA domain containing 2 INVOLVED IN cell migration (ortholog); mitochondrial respiratory chain complex III assembly (ortholog); response to bacterium (ortholog); FOUND IN endosome (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 11 30124459 30139821 - 30032202 116912459 MODEL JAAIVD010000006;XM_032916525 XP_032772416 OCIA domain-containing protein 2 protein-coding 625908542 Ptgis prostaglandin I2 synthase ENCODES a protein that exhibits heme binding (ortholog); prostaglandin-I synthase activity (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); cellular response to estradiol stimulus (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH Arterial Occlusive Diseases (ortholog); atherosclerosis (ortholog); autism spectrum disorder (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) 5 150726140 150777483 + 22301074;30032202 116902314 MODEL JAAIVD010000023;XM_032904760;XM_032904761 XP_032760651;XP_032760652 prostacyclin synthase protein-coding 625908559 LOC116913095 cytochrome c1, heme protein, mitochondrial INVOLVED IN response to glucagon (ortholog); ASSOCIATED WITH mitochondrial complex III deficiency nuclear type 1 (ortholog); mitochondrial complex III deficiency nuclear type 6 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex III (ortholog) 1 248678126 248680499 + 22301074;30032202 116913095 MODEL JAAIVD010000025;XM_032917231;XM_032917240 XP_032773122;XP_032773131 protein-coding 625908574 LOC116894130 olfactory receptor 52E8-like 2 103945170 103946108 - 22301074 116894130 MODEL JAAIVD010000001;XM_032895849 XP_032751740 protein-coding 625908577 LOC116892898 60S ribosomal protein L34-like 2 199752667 199753519 + 22301074;30032202 116892898 MODEL JAAIVD010000001;XM_032894811 XP_032750702 protein-coding 625908582 Asap3 ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN cell migration (ortholog); positive regulation of GTPase activity (ortholog); regulation of stress fiber assembly (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); FOUND IN focal adhesion (ortholog); ruffle (ortholog) 1 21993128 22033657 - 22301074;30032202 116894412 MODEL JAAIVD010000025;XM_032896119 XP_032752010 arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3 protein-coding 625908611 LOC116893694 olfactory receptor 5B2-like 2 12992550 12993485 + 22301074;30032202 116893694 MODEL JAAIVD010000001;XM_032895410 XP_032751301 protein-coding 625908614 LOC116892839 uncharacterized LOC116892839 2 191710140 191711890 + 116892839 MODEL JAAIVD010000001;XR_004386977 ncrna 625908619 LOC116899971 arf-GAP domain and FG repeat-containing protein 1-like 5 129841559 129843275 + 116899971 MODEL JAAIVD010000023 pseudo 625908620 Sox30 SRY-box transcription factor 30 ENCODES a protein that exhibits beta-catenin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); negative regulation of Wnt signaling pathway (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Liver Metastasis (ortholog); lung adenocarcinoma (ortholog); FOUND IN chromocenter (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 28705734 28733517 + 30032202 116910409 MODEL JAAIVD010000002;XM_032914251 XP_032770142 transcription factor SOX-30 protein-coding 625908627 LOC116898493 zinc finger protein 280B-like 4 122293524 122295144 - 116898493 MODEL JAAIVD010000003 pseudo 625908628 ND4L NADH dehydrogenase subunit 4L ENCODES a protein that exhibits NADH dehydrogenase (ubiquinone) activity (inferred); oxidoreductase activity, acting on NAD(P)H (inferred); INVOLVED IN ATP synthesis coupled electron transport (inferred); proton transmembrane transport (inferred); respiratory electron transport chain (inferred); FOUND IN mitochondrial inner membrane (inferred); NADH dehydrogenase complex (inferred); respiratory chain complex I (inferred) MT 9862 10158 + 7751807 B7SE69;E1U5S8 REVIEWED EU273707 ABX45245;YP_002791024 protein-coding 625908629 Eaf1 ELL associated factor 1 ENCODES a protein that exhibits transcription elongation factor activity (ortholog); INVOLVED IN regulation of transcription elongation by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; FOUND IN nuclear body (ortholog); transcription elongation factor complex (ortholog) 13 7214380 7225890 + 30032202 116914390 MODEL JAAIVD010000008;XM_032918609 XP_032774500 ELL-associated factor 1 protein-coding 625908638 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92746561 92746632 - 116904853 MODEL JAAIVD010000024 trna 625908639 LOC116899191 uncharacterized LOC116899191 4 88002485 88009513 + 116899191 MODEL JAAIVD010000003;XR_004387695 ncrna 625908645 LOC116894910 U7 small nuclear RNA 2 160472505 160472566 + 116894910 MODEL JAAIVD010000001;XR_004387112 snrna 625908648 Znf414 zinc finger protein 414 1 158774085 158776738 - 116907089 MODEL JAAIVD010000025;XM_032910057;XM_032910065;XM_032910071;XM_032910078 XP_032765948;XP_032765956;XP_032765962;XP_032765969 protein-coding 625908663 Strit1 small transmembrane regulator of ion transport 1 ENCODES a protein that exhibits enzyme activator activity (ortholog); INVOLVED IN positive regulation of ATPase-coupled calcium transmembrane transporter activity (ortholog); positive regulation of calcium ion import (ortholog); positive regulation of calcium ion import into sarcoplasmic reticulum (ortholog); FOUND IN sarcoplasmic reticulum (ortholog); sarcoplasmic reticulum membrane (ortholog) 3 91723328 91726178 + 22301074 116895475 MODEL JAAIVD010000012;XM_032896735;XM_032896736;XR_004387279 XP_032752626;XP_032752627 sarcoplasmic/endoplasmic reticulum calcium ATPase regulator DWORF protein-coding 625908675 LOC116889385 40S ribosomal protein S2-like X 59398626 59399484 + 116889385 MODEL JAAIVD010000014 pseudo 625908676 LOC116902283 bone morphogenetic protein 7-like 5 145092337 145125142 + 22301074;30032202 116902283 MODEL JAAIVD010000023;XM_032904714 XP_032760605 protein-coding 625908686 Ift38 intraflagellar transport 38 INVOLVED IN axoneme assembly (ortholog); cilium assembly (ortholog); floor plate formation (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); Joubert syndrome (ortholog); Leber congenital amaurosis (ortholog); FOUND IN centrosome (ortholog); ciliary base (ortholog); ciliary tip (ortholog) 9 17906633 17936426 - 30032202 116910068 MODEL JAAIVD010000002;XM_032913881 XP_032769772 Cluap1 clusterin associated protein 1;clusterin-associated protein 1 APPROVED protein-coding 625908702 LOC116900021 odorant-binding protein 2a-like 5 11418866 11423130 + 30032202 116900021 MODEL JAAIVD010000023;XM_032901819 XP_032757710 protein-coding 625908711 LOC116904674 uncharacterized LOC116904674 1 153885243 153890512 - 116904674 MODEL JAAIVD010000025;XR_004388376 ncrna 625908715 LOC116913879 eukaryotic initiation factor 4A-II-like 12 14193035 14193803 + 116913879 MODEL JAAIVD010000007 pseudo 625908716 Pak1 p21 (RAC1) activated kinase 1 ENCODES a protein that exhibits collagen binding (ortholog); gamma-tubulin binding (ortholog); identical protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); amygdala development (ortholog); branching morphogenesis of an epithelial tube (ortholog); PARTICIPATES IN adenosine signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Alzheimer's disease (ortholog); brain ischemia (ortholog); FOUND IN actin filament (ortholog); axon (ortholog); cell-cell junction (ortholog) 2 96140639 96218182 + 22301074;30032202 116891708 MODEL JAAIVD010000001;XM_032892973;XM_032892974;XM_032892975;XM_032892976;XM_032892977 XP_032748864;XP_032748865;XP_032748866;XP_032748867;XP_032748868 serine/threonine-protein kinase PAK 1 protein-coding 625908743 Rabep2 rabaptin, RAB GTPase binding effector protein 2 INVOLVED IN regulation of cilium assembly (ortholog); ASSOCIATED WITH cocaine dependence (ortholog); myoepithelioma (ortholog); nicotine dependence (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cytosol (ortholog) 2 75480678 75497515 - 22301074;30032202 116891527 MODEL JAAIVD010000001;XM_032892675 XP_032748566 rab GTPase-binding effector protein 2 protein-coding 625908760 LOC116900116 olfactory receptor 50-like 5 13966842 13967771 + 22301074;30032202 116900116 MODEL JAAIVD010000023;XM_032901892 XP_032757783 protein-coding 625908763 LOC116893770 uncharacterized LOC116893770 2 30099749 30101514 - 116893770 MODEL JAAIVD010000001;XR_004387005 ncrna 625908768 Fam219b family with sequence similarity 219 member B 8 51427052 51432704 + 116908086 MODEL JAAIVD010000027;XM_032911367;XM_032911368;XM_032911369 XP_032767258;XP_032767259;XP_032767260 protein FAM219B protein-coding 625908784 Mybl1 MYB proto-oncogene like 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); promoter-specific chromatin binding (ortholog); INVOLVED IN male meiosis I (ortholog); positive regulation of piRNA transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); COVID-19 (ortholog); high grade glioma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 1 144403769 144438672 - 22301074;30032202 116903834 MODEL JAAIVD010000025;XM_032906550;XM_032906558 XP_032762441;XP_032762449 myb-related protein A protein-coding 625908805 Ets1 ETS proto-oncogene 1, transcription factor ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN angiogenesis involved in wound healing (ortholog); cell motility (ortholog); cellular response to hydrogen peroxide (ortholog); PARTICIPATES IN altered p53 signaling pathway; hypoxia inducible factor pathway; interleukin-4 signaling pathway; ASSOCIATED WITH celiac disease (ortholog); Experimental Diabetes Mellitus (ortholog); Mouth Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) 8 28391153 28453884 + 22301074;30032202 116906750 MODEL JAAIVD010000027;XM_032909578 XP_032765469 protein C-ets-1 protein-coding 625908817 Abi1 abl interactor 1 ENCODES a protein that exhibits protein tyrosine kinase activator activity (ortholog); SH3 domain binding (ortholog); signaling adaptor activity (ortholog); INVOLVED IN dendrite morphogenesis (ortholog); lamellipodium morphogenesis (ortholog); megakaryocyte development (ortholog); PARTICIPATES IN E-cadherin signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cell leading edge (ortholog); filopodium tip (ortholog); glutamatergic synapse (ortholog) 14 1547249 1625829 + 30032202 116883319 MODEL JAAIVD010000009;XM_032884374;XM_032884375;XM_032884377;XM_032884378;XM_032884379;XM_032884380;XM_032884381;XM_032884382;XM_032884383;XM_032884384 XP_032740265;XP_032740266;XP_032740268;XP_032740269;XP_032740270;XP_032740271;XP_032740272;XP_032740273;XP_032740274;XP_032740275 protein-coding 625908848 Dcst1 DC-STAMP domain containing 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); negative regulation of type I interferon-mediated signaling pathway (ortholog); sperm-egg recognition (ortholog); FOUND IN plasma membrane (ortholog) 3 64308375 64320022 + 22301074 116896646 MODEL JAAIVD010000012;XM_032897971 XP_032753862 E3 ubiquitin-protein ligase DCST1 protein-coding 625908865 Kyat3 kynurenine aminotransferase 3 ENCODES a protein that exhibits L-kynurenine:2-oxoglutarate transaminase activity (ortholog); L-kynurenine:glyoxylate transaminase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN 2-oxoglutarate metabolic process (ortholog); amino acid metabolic process (ortholog); kynurenine metabolic process (ortholog); PARTICIPATES IN kynurenine metabolic pathway; FOUND IN mitochondrion (ortholog) 3 17993806 18032716 - 22301074;30032202 116896193 MODEL JAAIVD010000012;XM_032897241 XP_032753132 kynurenine--oxoglutarate transaminase 3 protein-coding 625908883 Mis18a MIS18 kinetochore protein A ENCODES a protein that exhibits identical protein binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN CENP-A containing chromatin assembly (ortholog); chromosome segregation (ortholog); heterochromatin formation (ortholog); FOUND IN CENP-A recruiting complex (ortholog); chromosome, centromeric region (ortholog) 4 53859846 53879812 + 30032202 116899009 MODEL JAAIVD010000003;XM_032900457 XP_032756348 protein Mis18-alpha protein-coding 625908892 LOC116908897 protein yippee-like 3 9 49920610 49921497 + 116908897 MODEL JAAIVD010000002;XR_004389037 pseudo 625908895 Rnf8 ring finger protein 8 ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); identical protein binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair-dependent chromatin remodeling (ortholog); double-strand break repair (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 18 4224217 4251512 - 22301074;30032202 116887544 MODEL JAAIVD010000013;XM_032889176 XP_032745067 E3 ubiquitin-protein ligase RNF8 protein-coding 625908907 Ube2c ubiquitin conjugating enzyme E2 C ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin-like protein ligase binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); exit from mitosis (ortholog); free ubiquitin chain polymerization (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Chromosome Aberrations (ortholog); COVID-19 (ortholog); FOUND IN anaphase-promoting complex (ortholog); cytosol (ortholog); plasma membrane (ortholog) 5 153185658 153188481 - 116900767 MODEL JAAIVD010000023;XM_032902479 XP_032758370 ubiquitin-conjugating enzyme E2 C protein-coding 625908916 LOC116894664 60S ribosomal protein L29-like 2 210000145 210000602 - 116894664 MODEL JAAIVD010000001 pseudo 625908917 Gpr63 G protein-coupled receptor 63 FOUND IN signaling receptor complex (ortholog) 1 118455803 118506709 - 22301074;30032202 116902716 MODEL JAAIVD010000025;XM_032905071 XP_032760962 probable G-protein coupled receptor 63 protein-coding 625908923 Atp5pb ATP synthase peripheral stalk-membrane subunit b ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); protein-containing complex binding (ortholog); proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); proton motive force-driven mitochondrial ATP synthesis (ortholog); substantia nigra development (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); clear cell renal cell carcinoma (ortholog); COVID-19 (ortholog); FOUND IN mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) 3 52170426 52181796 + 22301074;30032202 116896411 MODEL JAAIVD010000012;XM_032897555 XP_032753446 ATP synthase F(0) complex subunit B1, mitochondrial protein-coding 625908934 Chml CHM like Rab escort protein ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN protein geranylgeranylation (ortholog); ASSOCIATED WITH asthma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); Rab-protein geranylgeranyltransferase complex (ortholog) 10 54210492 54216573 - 22301074;30032202 116911114 MODEL JAAIVD010000005;XM_032914957;XM_032914958 XP_032770848;XP_032770849 rab proteins geranylgeranyltransferase component A 2 protein-coding 625908944 LOC116894876 U6 spliceosomal RNA 2 95310407 95310509 - 116894876 MODEL JAAIVD010000001;XR_004387088 snrna 625908947 Ptprh protein tyrosine phosphatase receptor type H ENCODES a protein that exhibits cadherin binding (ortholog); protein tyrosine phosphatase activity (ortholog); FOUND IN cytosol (ortholog); microvillus (ortholog); plasma membrane (ortholog) 2 177148719 177185468 - 22301074 116892657 MODEL JAAIVD010000001;XM_032894480 XP_032750371 receptor-type tyrosine-protein phosphatase H protein-coding 625908973 Otud7b OTU deubiquitinase 7B ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); cysteine-type peptidase activity (ortholog); K48-linked deubiquitinase activity (ortholog); INVOLVED IN in utero embryonic development (ortholog); mucosal immune response (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH Weight Loss (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 3 61123524 61179076 - 22301074;30032202 116896522 MODEL JAAIVD010000012;XM_032897704 XP_032753595 OTU domain-containing protein 7B protein-coding 625908990 LOC116883759 uncharacterized LOC116883759 14 62867428 62876510 + 116883759 MODEL JAAIVD010000009;XR_004385783 ncrna 625908995 Wdr33 WD repeat domain 33 INVOLVED IN mRNA 3'-end processing (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; FOUND IN fibrillar center (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 15 12335194 12440441 - 22301074;30032202 116884704 MODEL JAAIVD010000010;XM_032885892 XP_032741783 pre-mRNA 3' end processing protein WDR33 protein-coding 625909021 LOC116903709 solute carrier organic anion transporter family member 1A5 6 7727565 7742607 - 22301074;30032202 116903709 MODEL JAAIVD010000024;XM_032906382 XP_032762273 protein-coding 625909034 Foxp3 forkhead box P3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN B cell homeostasis (ortholog); CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation (ortholog); chromatin remodeling (ortholog); ASSOCIATED WITH Acute-On-Chronic Liver Failure (ortholog); adult T-cell leukemia/lymphoma (ortholog); Airway Remodeling (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) X 14543453 14550195 - 30032202 116888759 MODEL JAAIVD010000014;XM_032890051 XP_032745942 forkhead box protein P3 protein-coding 625909049 Cldn15 claudin 15 ENCODES a protein that exhibits paracellular tight junction channel activity (ortholog); INVOLVED IN paracellular transport (ortholog); regulation of intestinal D-glucose absorption (ortholog); regulation of intestinal lipid absorption (ortholog); ASSOCIATED WITH malignant mesothelioma (ortholog); FOUND IN lateral plasma membrane (ortholog); tight junction (ortholog) 16 17043631 17052380 - 22301074;30032202 116885318 MODEL JAAIVD010000004;XM_032886579;XM_032886580 XP_032742470;XP_032742471 claudin-15 protein-coding 625909062 LOC116906160 cathepsin L1-like 7 98850720 98853140 - 116906160 MODEL JAAIVD010000026;XR_004388584 pseudo 625909066 LOC116906890 uncharacterized LOC116906890 8 72806415 72808960 + 116906890 MODEL JAAIVD010000027;XR_004388778 ncrna 625909071 Gas7 growth arrest specific 7 ENCODES a protein that exhibits actin filament binding (ortholog); identical protein binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); actin filament polymerization (ortholog); neuron differentiation (ortholog); ASSOCIATED WITH obesity (ortholog); FOUND IN actin filament (ortholog); ruffle (ortholog) 9 47068402 47295965 + 30032202 116909968 MODEL JAAIVD010000002;XM_032913742;XM_032913743;XM_032913744;XM_032913745 XP_032769633;XP_032769634;XP_032769635;XP_032769636 growth arrest-specific protein 7 protein-coding 625909098 LOC116903945 small nuclear ribonucleoprotein E-like 6 101210030 101211295 - 116903945 MODEL JAAIVD010000024 pseudo 625909099 Bcs1l BCS1 ubiquinol-cytochrome c reductase complex chaperone ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); mitochondrial respiratory chain complex III assembly (ortholog); mitochondrial respiratory chain complex IV assembly (ortholog); ASSOCIATED WITH Bjornstad syndrome (ortholog); brain disease (ortholog); epilepsy (ortholog); FOUND IN mitochondrion (ortholog) 4 148028263 148032225 + 22301074;30032202 116899506 MODEL JAAIVD010000003;XM_032901357;XM_032901358 XP_032757248;XP_032757249 mitochondrial chaperone BCS1 protein-coding 625909115 LOC116901703 cleavage stimulation factor subunit 3 5 82553348 82574684 + 22301074;30032202 116901703 MODEL JAAIVD010000023;XM_032903832 XP_032759723 protein-coding 625909137 LOC116906055 glyceraldehyde-3-phosphate dehydrogenase-like 7 49220602 49221241 - 116906055 MODEL JAAIVD010000026 pseudo 625909138 LOC116898539 exportin-5-like 4 146459262 146460176 - 116898539 MODEL JAAIVD010000003 pseudo 625909139 LOC116897042 60S ribosomal protein L34-like 3 147453797 147455441 + 116897042 MODEL JAAIVD010000012 pseudo 625909140 Gfpt2 glutamine-fructose-6-phosphate transaminase 2 ENCODES a protein that exhibits L-glutamine:D-fructose-6-phosphate transaminase (isomerizing) activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); fructose 6-phosphate metabolic process (ortholog); UDP-N-acetylglucosamine biosynthetic process (ortholog); ASSOCIATED WITH Diabetic Nephropathies (ortholog); type 2 diabetes mellitus (ortholog) 9 32461864 32507947 + 22301074;30032202 116909483 MODEL JAAIVD010000002;XM_032913079 XP_032768970 glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 protein-coding 625909163 Adgra2 adhesion G protein-coupled receptor A2 INVOLVED IN angiogenesis (ortholog); canonical Wnt signaling pathway (ortholog); central nervous system development (ortholog); ASSOCIATED WITH Ependymomas (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog); Wnt signalosome (ortholog) 13 59392555 59430951 - 22301074;30032202 116914550 MODEL JAAIVD010000008;XM_032918899 XP_032774790 protein-coding 625909186 LOC116893019 calponin-2-like 2 225848834 225849707 - 116893019 MODEL JAAIVD010000001 pseudo 625909187 LOC116890373 U6 spliceosomal RNA 1 125887674 125887779 - 116890373 MODEL JAAIVD010000025;XR_004386588 snrna 625909190 LOC116904488 bcl-2-associated transcription factor 1-like 6 148552579 148555676 + 116904488 MODEL JAAIVD010000024 pseudo 625909191 Pias4 protein inhibitor of activated STAT 4 ENCODES a protein that exhibits DNA binding (ortholog); SUMO ligase activity (ortholog); SUMO transferase activity (ortholog); INVOLVED IN central nervous system development (ortholog); hair follicle development (ortholog); limb epidermis development (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; Jak-Stat signaling pathway; type II interferon signaling pathway; FOUND IN cytoplasm (ortholog); nuclear matrix (ortholog); nucleoplasm (ortholog) 1 153719733 153733318 + 22301074;30032202 116904557 MODEL JAAIVD010000025;XM_032907355 XP_032763246 E3 SUMO-protein ligase PIAS4 protein-coding 625909206 Musk muscle associated receptor tyrosine kinase ENCODES a protein that exhibits PDZ domain binding (ortholog); protein kinase binding (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN cochlea development (ortholog); enzyme-linked receptor protein signaling pathway (ortholog); long-term synaptic potentiation (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 4C (ortholog); congenital myasthenic syndrome 9 (ortholog); FOUND IN cell projection (ortholog); external side of plasma membrane (ortholog); membrane (ortholog) 1 93193901 93284524 - 22301074;30032202 116888495 MODEL JAAIVD010000025;XM_032889780;XM_032889790;XM_032889796;XM_032889803;XM_032889812;XM_032889818 XP_032745671;XP_032745681;XP_032745687;XP_032745694;XP_032745703;XP_032745709 muscle, skeletal receptor tyrosine-protein kinase protein-coding 625909234 LOC116899352 heterogeneous nuclear ribonucleoprotein A1-like 1 103627124 103635085 - 116899352 MODEL JAAIVD010000025 pseudo 625909235 LOC116889461 AP-4 complex subunit sigma-1-like 1 136967746 136968174 + 116889461 MODEL JAAIVD010000025 pseudo 625909236 Flt1 fms related receptor tyrosine kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); growth factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN angiogenesis (ortholog); blood vessel morphogenesis (ortholog); branching involved in blood vessel morphogenesis (ortholog); PARTICIPATES IN axitinib pharmacodynamics pathway; bevacizumab pharmacodynamics pathway; glypican signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); allergic contact dermatitis (ortholog); angiosarcoma (ortholog); FOUND IN extracellular region (ortholog); nucleus (ortholog); plasma membrane (ortholog) 16 6120306 6290299 + 22301074;30032202 116885447 MODEL JAAIVD010000004;XM_032886730 XP_032742621 vascular endothelial growth factor receptor 1 protein-coding 625909270 LOC116890856 histidine-rich glycoprotein-like 2 7783796 7784641 - 116890856 MODEL JAAIVD010000001;XM_032891421 XP_032747312 protein-coding 625909275 Phf23 PHD finger protein 23 INVOLVED IN negative regulation of autophagosome assembly (ortholog); negative regulation of autophagosome maturation (ortholog); positive regulation of protein ubiquitination (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 9 49602588 49606313 + 30032202 116909700 MODEL JAAIVD010000002;XM_032913366;XM_032913368 XP_032769257;XP_032769259 protein-coding 625909286 Actrt3 actin related protein T3 FOUND IN male germ cell nucleus (ortholog) 3 124827066 124830203 - 116895555 MODEL JAAIVD010000012;XM_032896792 XP_032752683 actin-related protein T3 protein-coding 625909292 Mettl27 methyltransferase like 27 16 19105410 19114592 - 116885766 MODEL JAAIVD010000004;XM_032887083 XP_032742974 methyltransferase-like protein 27 protein-coding 625909301 LOC116899945 U2 spliceosomal RNA 4 113901009 113901189 - 116899945 MODEL JAAIVD010000003 pseudo 625909302 Trnaa-agc transfer RNA alanine (anticodon AGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42392682 42392754 - 116884174 MODEL JAAIVD010000009 trna 625909303 LOC116891547 60S ribosomal protein L7-like 2 78476074 78476931 + 116891547 MODEL JAAIVD010000001 pseudo 625909304 LOC116894322 mas-related G-protein coupled receptor member B2-like 2 151137766 151138623 + 22301074;30032202 116894322 MODEL JAAIVD010000001;XM_032896016 XP_032751907 protein-coding 625909308 Hes7 hes family bHLH transcription factor 7 ENCODES a protein that exhibits RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); Notch signaling pathway (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH genetic disease (ortholog); spondylocostal dysostosis 2 (ortholog); spondylocostal dysostosis 4 (ortholog) 9 48719146 48723952 + 22301074;30032202 116910120 MODEL JAAIVD010000002;XM_032913954 XP_032769845 transcription factor HES-7 protein-coding 625909317 Prop1 PROP paired-like homeobox 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN adenohypophysis development (ortholog); animal organ morphogenesis (ortholog); blood vessel development (ortholog); ASSOCIATED WITH amenorrhea (ortholog); combined pituitary hormone deficiency (ortholog); combined pituitary hormone deficiency 2 (ortholog); FOUND IN transcription regulator complex (ortholog) 9 33600286 33602746 - 22301074;30032202 116908531 MODEL JAAIVD010000002;XM_032911715 XP_032767606 homeobox protein prophet of Pit-1 protein-coding 625909322 Znf570 zinc finger protein 570 2 166075803 166082546 - 22301074 116893374 MODEL JAAIVD010000001;XM_032895173 XP_032751064 protein-coding 625909328 Vstm2l V-set and transmembrane domain containing 2 like INVOLVED IN negative regulation of neuron apoptotic process (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog) 5 137256992 137286464 + 116902232 MODEL JAAIVD010000023;XM_032904639 XP_032760530 V-set and transmembrane domain-containing protein 2-like protein protein-coding 625909336 LOC116902079 cystatin-C 5 128418077 128421962 - 22301074;30032202 116902079 MODEL JAAIVD010000023;XM_032904370 XP_032760261 protein-coding 625909343 LOC116884671 40S ribosomal protein S9-like 15 75622703 75623268 - 116884671 MODEL JAAIVD010000010 pseudo 625909344 LOC116894102 elongation factor 1-alpha 1-like 2 103515460 103517789 - 116894102 MODEL JAAIVD010000001 pseudo 625909345 Antxr2 ANTXR cell adhesion molecule 2 INVOLVED IN collagen fibril organization (ortholog); single fertilization (ortholog); uterus development (ortholog); ASSOCIATED WITH ankylosing spondylitis (ortholog); anthrax disease (ortholog); congenital myopathy 1A (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); membrane (ortholog) 11 6234657 6317428 + 22301074 116912654 MODEL JAAIVD010000006;XM_032916775 XP_032772666 anthrax toxin receptor 2 protein-coding 625909365 Kif3a kinesin family member 3A ENCODES a protein that exhibits intraciliary transport particle B binding (ortholog); kinesin binding (ortholog); microtubule binding (ortholog); INVOLVED IN alpha-tubulin acetylation (ortholog); anterior/posterior pattern specification (ortholog); anterograde dendritic transport (ortholog); PARTICIPATES IN Hedgehog signaling pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; ASSOCIATED WITH allergic disease (ortholog); asthma (ortholog); bone development disease (ortholog); FOUND IN axon cytoplasm (ortholog); axoneme (ortholog); centriole (ortholog) 9 36054616 36086733 + 22301074;30032202 116908566 MODEL JAAIVD010000002;XM_032911769 XP_032767660 kinesin-like protein KIF3A protein-coding 625909388 LOC116913229 PEST proteolytic signal-containing nuclear protein-like 12 71440086 71440788 + 116913229 MODEL JAAIVD010000007 pseudo 625909389 LOC116890842 insulin-2 2 6790755 6791843 + 22301074;30032202 116890842 MODEL JAAIVD010000001;XM_032891371 XP_032747262 protein-coding 625909396 Ccdc190 coiled-coil domain containing 190 10 49135863 49143172 + 116911180 MODEL JAAIVD010000005;XM_032915047 XP_032770938 coiled-coil domain-containing protein 190 protein-coding 625909404 LOC116887282 glutathione S-transferase theta-3 18 11657772 11663811 + 30032202 116887282 MODEL JAAIVD010000013;XM_032888861;XM_032888862 XP_032744752;XP_032744753 protein-coding 625909416 Pdzd2 PDZ domain containing 2 ASSOCIATED WITH lissencephaly (ortholog); FOUND IN apical part of cell (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) 3 168500001 168731105 + 22301074 116897116 MODEL JAAIVD010000012;XM_032898761 XP_032754652 PDZ domain-containing protein 2 protein-coding 625909444 Xpo1 exportin 1 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); nuclear export signal receptor activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN cellular response to salt (ortholog); cellular response to triglyceride (ortholog); mRNA export from nucleus (ortholog); PARTICIPATES IN CRM1 export pathway; Hedgehog signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH amenorrhea (ortholog); atrial fibrillation (ortholog); colorectal cancer (ortholog); FOUND IN annulate lamellae (ortholog); cytoplasm (ortholog); cytosol (ortholog) 11 93639648 93681865 - 22301074;30032202 116911960 MODEL JAAIVD010000006;XM_032915880 XP_032771771 exportin-1 protein-coding 625909472 LOC116906671 60S ribosomal protein L29-like 8 37062668 37063135 - 116906671 MODEL JAAIVD010000027 pseudo 625909473 LOC116904521 BTB/POZ domain-containing protein KCTD20-like 6 7295364 7296245 - 116904521 MODEL JAAIVD010000024 pseudo 625909474 LOC116898269 olfactory receptor 6B2-like 4 164448085 164449023 - 22301074 116898269 MODEL JAAIVD010000003;XM_032899621 XP_032755512 protein-coding 625909477 Lpcat3 lysophosphatidylcholine acyltransferase 3 ENCODES a protein that exhibits 1-acylglycerophosphocholine O-acyltransferase activity (ortholog); 1-acylglycerophosphoethanolamine O-acyltransferase activity (ortholog); 1-acylglycerophosphoserine O-acyltransferase activity (ortholog); INVOLVED IN chylomicron assembly (ortholog); endoplasmic reticulum membrane organization (ortholog); intestinal stem cell homeostasis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 6 23179668 23220215 - 30032202 116903286 MODEL JAAIVD010000024;XM_032905709 XP_032761600 lysophospholipid acyltransferase 5 protein-coding 625909494 Qrich1 glutamine rich 1 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN endoplasmic reticulum unfolded protein response (ortholog); integrated stress response signaling (ortholog); intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 8 99850434 99889587 + 116907595 MODEL JAAIVD010000027;XM_032910636;XM_032910637;XM_032910638;XM_032910639;XM_032910640;XM_032910641;XM_032910642;XM_032910643;XM_032910644 XP_032766527;XP_032766528;XP_032766529;XP_032766530;XP_032766531;XP_032766532;XP_032766533;XP_032766534;XP_032766535 glutamine-rich protein 1 protein-coding 625909530 Gsx2 GS homeobox 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN brain development (ortholog); central nervous system development (ortholog); forebrain dorsal/ventral pattern formation (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); Diencephalic-Mesencephalic Junction Dysplasia Syndrome 2 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 11 31847526 31849232 + 22301074;30032202 116912076 MODEL JAAIVD010000006;XM_032915955 XP_032771846 protein-coding 625909535 LOC116883373 estradiol 17 beta-dehydrogenase 5 14 18628859 18647759 + 30032202 116883373 MODEL JAAIVD010000009;XM_032884488;XM_032884489 XP_032740379;XP_032740380 protein-coding 625909551 LOC116891770 40S ribosomal protein S27 2 100137040 100137381 - 22301074;30032202 116891770 MODEL JAAIVD010000001;XM_032893095 XP_032748986 protein-coding 625909556 LOC116897739 60S ribosomal protein L39-like 4 157498974 157499216 + 116897739 MODEL JAAIVD010000003 pseudo 625909557 LOC116906838 olfactory receptor 145-like 8 32298428 32302032 + 22301074;30032202 116906838 MODEL JAAIVD010000027;XM_032909726 XP_032765617 protein-coding 625909561 ND4 NADH dehydrogenase subunit 4 ENCODES a protein that exhibits NADH dehydrogenase (ubiquinone) activity (inferred); NADH dehydrogenase activity (inferred); ubiquinone binding (inferred); INVOLVED IN aerobic respiration (inferred); ATP synthesis coupled electron transport (inferred); electron transport coupled proton transport (inferred); FOUND IN mitochondrial membrane (inferred) MT 10152 11529 + 7751811 B7SE70 REVIEWED EU273707 ABX45241;YP_002791025 protein-coding 625909562 Pigr polymeric immunoglobulin receptor ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); polymeric immunoglobulin binding (ortholog); polymeric immunoglobulin receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); epidermal growth factor receptor signaling pathway (ortholog); Fc receptor signaling pathway (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH IgA glomerulonephritis (ortholog); Stomach Neoplasms (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog); recycling endosome membrane (ortholog) 10 4953229 4980897 - 30032202 116911146 MODEL JAAIVD010000005;XM_032914998 XP_032770889 protein-coding 625909577 LOC116902521 U7 small nuclear RNA 5 17445267 17445329 + 116902521 MODEL JAAIVD010000023;XR_004388130 snrna 625909580 Cdca8 cell division cycle associated 8 INVOLVED IN chromosome organization (ortholog); mitotic metaphase chromosome alignment (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromocenter (ortholog); chromosome passenger complex (ortholog); chromosome, centromeric region (ortholog) 1 33365781 33381451 + 30032202 116896833 MODEL JAAIVD010000025;XM_032898319;XM_032898330 XP_032754210;XP_032754221 borealin protein-coding 625909597 LOC116887225 olfactory receptor 2A12-like 1 38264039 38265024 + 22301074 116887225 MODEL JAAIVD010000025;XM_032888790 XP_032744681 protein-coding 625909601 LOC116888810 programmed cell death protein 6-like X 88238728 88239051 - 22301074 116888810 MODEL JAAIVD010000014;XM_032890089 XP_032745980 protein-coding 625909606 LOC116914696 uncharacterized LOC116914696 13 1400412 1470489 - 116914696 MODEL JAAIVD010000008;XR_004389763 ncrna 625909610 LOC116890511 olfactory receptor 8S1-like 1 271287058 271290444 + 22301074 116890511 MODEL JAAIVD010000025;XM_032891011 XP_032746902 protein-coding 625909614 LOC116883518 histone H2A type 1-B 14 41886518 41887350 - 22301074;30032202 116883518 MODEL JAAIVD010000009;XM_032884691 XP_032740582 protein-coding 625909618 LOC116888641 40S ribosomal protein S4, X isoform-like X 92312893 92313670 - 116888641 MODEL JAAIVD010000014 pseudo 625909619 Fbxl7 F-box and leucine rich repeat protein 7 INVOLVED IN G2/M transition of mitotic cell cycle (ortholog); mitotic cell cycle (ortholog); protein polyubiquitination (ortholog); FOUND IN centrosome (ortholog); SCF ubiquitin ligase complex (ortholog) 3 153931302 154283178 + 22301074;30032202 116897063 MODEL JAAIVD010000012;XM_032898687 XP_032754578 F-box/LRR-repeat protein 7 protein-coding 625909627 LOC116908343 U7 small nuclear RNA 8 101650813 101650873 + 116908343 MODEL JAAIVD010000027;XR_004388894 snrna 625909630 LOC116890428 U7 small nuclear RNA 1 255811673 255811735 - 116890428 MODEL JAAIVD010000025;XR_004386626 snrna 625909633 Sv2a synaptic vesicle glycoprotein 2A ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN intracellular calcium ion homeostasis (ortholog); modulation of inhibitory postsynaptic potential (ortholog); negative regulation of excitatory postsynaptic potential (ortholog); ASSOCIATED WITH Developmental and Epileptic Encephalopathy 113 (ortholog); Experimental Seizures (ortholog); genetic disease (ortholog); FOUND IN cell-cell junction (ortholog); dendrite (ortholog); endoplasmic reticulum (ortholog) 3 61087275 61101798 - 22301074 116896521 MODEL JAAIVD010000012;XM_032897703 XP_032753594 protein-coding 625909650 Dnajc27 DnaJ heat shock protein family (Hsp40) member C27 ENCODES a protein that exhibits GTPase activity (ortholog); INVOLVED IN positive regulation of ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH obesity (ortholog); FOUND IN nucleus (ortholog) 7 24748733 24777501 + 22301074 116906022 MODEL JAAIVD010000026;XM_032909074 XP_032764965 dnaJ homolog subfamily C member 27 protein-coding 625909661 LOC116902551 small nucleolar RNA SNORA48 5 42895669 42895809 - 116902551 MODEL JAAIVD010000023;XR_004388152 snorna 625909664 Sptssa serine palmitoyltransferase small subunit A ENCODES a protein that exhibits serine C-palmitoyltransferase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); glycosphingolipid biosynthetic process (ortholog); intracellular protein localization (ortholog); ASSOCIATED WITH hereditary spastic paraplegia 90A (ortholog); hereditary spastic paraplegia 90B (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum (ortholog); serine palmitoyltransferase complex (ortholog) 7 68027128 68038800 - 30032202 116905047 MODEL JAAIVD010000026;XM_032907735 XP_032763626 protein-coding 625909670 Nrp2 neuropilin 2 ENCODES a protein that exhibits identical protein binding (ortholog); semaphorin receptor activity (ortholog); INVOLVED IN axon extension involved in axon guidance (ortholog); axon guidance (ortholog); cellular response to leukemia inhibitory factor (ortholog); PARTICIPATES IN vascular endothelial growth factor signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); genetic disease (ortholog); FOUND IN axon (ortholog); glutamatergic synapse (ortholog); postsynaptic membrane (ortholog) 4 136712040 136824982 + 22301074 116899440 MODEL JAAIVD010000003;XM_032901197;XM_032901198 XP_032757088;XP_032757089 neuropilin-2 protein-coding 625909697 Vezf1 vascular endothelial zinc finger 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN angiogenesis (ortholog); endothelial cell development (ortholog); positive regulation of endothelial cell differentiation (ortholog); ASSOCIATED WITH Dilated Cardiomyopathy 1OO (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 9 82727346 82743536 - 30032202 116908837 MODEL JAAIVD010000002;XM_032912258;XM_032912259 XP_032768149;XP_032768150 protein-coding 625909711 Tmem269 transmembrane protein 269 1 37733054 37743577 + 116887094 MODEL JAAIVD010000025;XM_032888608 XP_032744499 protein-coding 625909720 Crb2 crumbs cell polarity complex component 2 ENCODES a protein that exhibits aspartic-type endopeptidase inhibitor activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN circulatory system development (ortholog); establishment of cell polarity (ortholog); ingression involved in gastrulation with mouth forming second (ortholog); ASSOCIATED WITH focal segmental glomerulosclerosis (ortholog); focal segmental glomerulosclerosis 9 (ortholog); genetic disease (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); apicolateral plasma membrane (ortholog) 5 15543547 15565137 + 22301074 116901361 MODEL JAAIVD010000023;XM_032903213 XP_032759104 protein crumbs homolog 2 protein-coding 625909737 Prima1 proline rich membrane anchor 1 ENCODES a protein that exhibits enzyme binding (ortholog); protein-membrane adaptor activity (ortholog); INVOLVED IN establishment of localization in cell (ortholog); ASSOCIATED WITH autosomal dominant nocturnal frontal lobe epilepsy (ortholog); muscular dystrophy (ortholog); FOUND IN membrane raft (ortholog); plasma membrane (ortholog) 7 114472981 114524552 - 116905367 MODEL JAAIVD010000026;XM_032908300 XP_032764191 proline-rich membrane anchor 1 protein-coding 625909746 Tbxas1 thromboxane A synthase 1 ENCODES a protein that exhibits heme binding (ortholog); hydroperoxy icosatetraenoate dehydratase activity (ortholog); thromboxane-A synthase activity (ortholog); INVOLVED IN icosanoid metabolic process (ortholog); intracellular chloride ion homeostasis (ortholog); positive regulation of vasoconstriction (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); alcohol-associated liver disease (ortholog); arteriosclerosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog); endoplasmic reticulum membrane (ortholog) 6 100714516 100882886 - 22301074;30032202 116903938 MODEL JAAIVD010000024;XM_032906715 XP_032762606 thromboxane-A synthase protein-coding 625909763 LOC116893561 40S ribosomal protein S2-like 2 215704559 215705860 + 116893561 MODEL JAAIVD010000001 pseudo 625909764 LOC116892445 cytochrome P450 2S1 ENCODES a protein that exhibits hydro-lyase activity (ortholog); monooxygenase activity (ortholog); thromboxane-A synthase activity (ortholog); INVOLVED IN icosanoid metabolic process (ortholog); prostaglandin metabolic process (ortholog); retinoic acid metabolic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); psoriasis (ortholog); FOUND IN endoplasmic reticulum (ortholog) 2 168980960 168996564 + 22301074;30032202 116892445 MODEL JAAIVD010000001;XM_032894146 XP_032750037 protein-coding 625909777 Ahsa1 activator of HSP90 ATPase activity 1 ENCODES a protein that exhibits ATPase activator activity (ortholog); Hsp90 protein binding (ortholog); protein folding chaperone (ortholog); INVOLVED IN maintenance of unfolded protein (ortholog); positive regulation of ATP-dependent activity (ortholog); FOUND IN cytosol (ortholog) 7 101363538 101371277 + 22301074;30032202 116905322 MODEL JAAIVD010000026;XM_032908214 XP_032764105 activator of 90 kDa heat shock protein ATPase homolog 1 protein-coding 625909790 Clec3a C-type lectin domain family 3 member A 17 34055508 34065070 + 116886254 MODEL JAAIVD010000011;XM_032887675 XP_032743566 protein-coding 625909797 Gatad2b GATA zinc finger domain containing 2B INVOLVED IN chromatin remodeling (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); GAND syndrome (ortholog); genetic disease (ortholog); FOUND IN chromosome, telomeric region (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 3 63272576 63348107 - 22301074;30032202 116896613 MODEL JAAIVD010000012;XM_032897869;XM_032897870;XM_032897872;XM_032897873 XP_032753760;XP_032753761;XP_032753763;XP_032753764 transcriptional repressor p66-beta protein-coding 625909825 LOC116895098 small nucleolar RNA U13 2 81106144 81106240 + 116895098 MODEL JAAIVD010000001 pseudo 625909826 Bst2 bone marrow stromal cell antigen 2 ENCODES a protein that exhibits identical protein binding (ortholog); metalloendopeptidase inhibitor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN defense response to virus (ortholog); innate immune response (ortholog); negative regulation of cell growth (ortholog); ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); brain glioma (ortholog); chikungunya (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); cytoplasm (ortholog) 13 13453700 13457226 + 22301074;30032202 116914585 MODEL JAAIVD010000008;XM_032918942 XP_032774833 bone marrow stromal antigen 2 protein-coding 625909835 LOC116914263 uncharacterized LOC116914263 1 251978417 251986332 + 116914263 MODEL JAAIVD010000025;XR_004389740;XR_004389741 ncrna 625909841 Trnap-agg transfer RNA proline (anticodon AGG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42440183 42440254 - 116884183 MODEL JAAIVD010000009 trna 625909842 LOC116900992 Ig kappa chain V-V region L7-like 5 109463295 109463889 + 116900992 MODEL JAAIVD010000023 pseudo 625909843 Tefm transcription elongation factor, mitochondrial ENCODES a protein that exhibits crossover junction DNA endonuclease activity (ortholog); transcription elongation factor activity (ortholog); INVOLVED IN mitochondrial DNA replication (ortholog); positive regulation of mitochondrial transcription (ortholog); regulation of oxidative phosphorylation (ortholog); ASSOCIATED WITH Combined Oxidative Phosphorylation Deficiency 58 (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog); mitochondrion (ortholog) 9 90287802 90292483 + 22301074;30032202 116909918 MODEL JAAIVD010000002;XM_032913681 XP_032769572 protein-coding 625909851 Eepd1 endonuclease/exonuclease/phosphatase family domain containing 1 INVOLVED IN positive regulation of cholesterol efflux (ortholog); FOUND IN plasma membrane (ortholog) 8 21412045 21513080 + 22301074;30032202 116906615 MODEL JAAIVD010000027;XM_032909373 XP_032765264 endonuclease/exonuclease/phosphatase family domain-containing protein 1 protein-coding 625909862 LOC116893157 tripartite motif-containing protein 30A-like 2 101347254 101355014 + 22301074 116893157 MODEL JAAIVD010000001;XM_032895074 XP_032750965 protein-coding 625909869 Sf3a1 splicing factor 3a subunit 1 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN mRNA processing (ortholog); mRNA splicing, via spliceosome (ortholog); U2-type prespliceosome assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH diffuse large B-cell lymphoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) 11 73143630 73164460 + 22301074;30032202 116912844 MODEL JAAIVD010000006;XM_032917050 XP_032772941 protein-coding 625909889 LOC116885819 40S ribosomal protein S17-like 16 37077804 37078207 - 116885819 MODEL JAAIVD010000004 pseudo 625909890 Lhx8 LIM homeobox 8 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN female gonad development (ortholog); forebrain neuron development (ortholog); forebrain neuron differentiation (ortholog); ASSOCIATED WITH Binge Drinking (ortholog); FOUND IN female germ cell nucleus (ortholog) 3 7124969 7146779 + 22301074;30032202 116895280 MODEL JAAIVD010000012;XM_032896594;XM_032896595 XP_032752485;XP_032752486 LIM/homeobox protein Lhx8 protein-coding 625909907 LOC116891617 oocyte-secreted protein 3-like 2 11153247 11167537 - 116891617 MODEL JAAIVD010000001;XM_032892824 XP_032748715 protein-coding 625909914 LOC116909582 keratin-associated protein 4-12-like 9 54491700 54492254 - 22301074;30032202 116909582 MODEL JAAIVD010000002;XM_032913202;XM_032913203 XP_032769093;XP_032769094 protein-coding 625909921 LOC116914111 small nucleolar RNA SNORA51 12 90474778 90474905 + 116914111 MODEL JAAIVD010000007;XR_004389676 snorna 625909924 Runx1 RUNX family transcription factor 1 ENCODES a protein that exhibits calcium ion binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN behavioral response to pain (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); central nervous system development (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute megakaryocytic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN basement membrane (ortholog); chromatin (ortholog); nucleoplasm (ortholog) 4 51787352 52016639 + 22301074;30032202 116898977 MODEL JAAIVD010000003;XM_032900402;XM_032900403 XP_032756293;XP_032756294 runt-related transcription factor 1 protein-coding 625909938 LOC116912818 small nuclear ribonucleoprotein Sm D2-like 11 32320434 32320783 + 116912818 MODEL JAAIVD010000006 pseudo 625909939 Cdc5l cell division cycle 5 like ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); leucine zipper domain binding (ortholog); INVOLVED IN cellular response to fibroblast growth factor stimulus (ortholog); cellular response to interleukin-2 (ortholog); cellular response to nerve growth factor stimulus (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH CAKUT (ortholog); esophagus adenocarcinoma (ortholog); Lung Neoplasms (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); DNA replication factor A complex (ortholog) 4 84454349 84491979 + 30032202 116899138 MODEL JAAIVD010000003;XM_032900674 XP_032756565 cell division cycle 5-like protein protein-coding 625909959 Cfap46 cilia and flagella associated protein 46 ASSOCIATED WITH visceral heterotaxy (ortholog); visceral heterotaxy 5 (ortholog) 2 62170202 62256480 + 22301074;30032202 116891359 MODEL JAAIVD010000001;XM_032892355 XP_032748246 cilia- and flagella-associated protein 46 protein-coding 625910022 Rb1cc1 RB1 inducible coiled-coil 1 ENCODES a protein that exhibits protein kinase binding (ortholog); protein-membrane adaptor activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); defense response to virus (ortholog); PARTICIPATES IN autophagy pathway; mTOR signaling pathway; ASSOCIATED WITH breast adenocarcinoma (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN Atg1/ULK1 kinase complex (ortholog); autophagosome membrane (ortholog); cytosol (ortholog) 1 141399037 141464457 + 30032202 116903767 MODEL JAAIVD010000025;XM_032906458;XM_032906466 XP_032762349;XP_032762357 RB1-inducible coiled-coil protein 1 protein-coding 625910053 Trappc12 trafficking protein particle complex subunit 12 INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); Golgi organization (ortholog); metaphase chromosome alignment (ortholog); ASSOCIATED WITH ENCEPHALOPATHY, PROGRESSIVE, EARLY-ONSET, WITH BRAIN ATROPHY AND SPASTICITY (ortholog); genetic disease (ortholog); hydrocephalus (ortholog); FOUND IN endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog); kinetochore (ortholog) 7 42138789 42204073 - 22301074;30032202 116904932 MODEL JAAIVD010000026;XM_032907563;XM_032907564 XP_032763454;XP_032763455 trafficking protein particle complex 12 protein-coding 625910072 LOC116889520 small nucleolar RNA SNORA17 X 35014585 35014716 - 116889520 MODEL JAAIVD010000014;XR_004386462 snorna 625910075 Calm2 calmodulin 2 ENCODES a protein that exhibits adenylate cyclase activator activity (ortholog); adenylate cyclase binding (ortholog); calcium channel inhibitor activity (ortholog); INVOLVED IN autophagosome membrane docking (ortholog); calcineurin-mediated signaling (ortholog); cellular response to interferon-beta (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; calcium/calcium-mediated signaling pathway; calcium/calmodulin dependent kinase 2 signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol withdrawal syndrome (ortholog); cannabis abuse (ortholog); FOUND IN calcium channel complex (ortholog); calyx of Held (ortholog); catalytic complex (ortholog) 7 5532140 5544874 + 22301074;30032202 116905747 MODEL JAAIVD010000026;XM_032908716 XP_032764607 calmodulin-2 protein-coding 625910084 Adgrg6 adhesion G protein-coupled receptor G6 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); laminin binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cartilage development (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); genetic disease (ortholog); idiopathic scoliosis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) 2 222716702 222787056 + 22301074;30032202 116893574 MODEL JAAIVD010000001;XM_032895281 XP_032751172 adhesion G-protein coupled receptor G6 protein-coding 625910111 Slc7a10 solute carrier family 7 member 10 ENCODES a protein that exhibits neutral L-amino acid transmembrane transporter activity (ortholog); INVOLVED IN D-alanine transmembrane transport (ortholog); D-serine transmembrane transport (ortholog); glycine transport (ortholog); FOUND IN apical dendrite (ortholog); neuronal cell body (ortholog); plasma membrane (ortholog) 2 163478622 163493602 - 22301074;30032202 116892270 MODEL JAAIVD010000001;XM_032893859;XM_032893860;XM_032893861 XP_032749750;XP_032749751;XP_032749752 asc-type amino acid transporter 1 protein-coding 625910130 Srpx2 sushi repeat containing protein X-linked 2 ENCODES a protein that exhibits hepatocyte growth factor binding (ortholog); identical protein binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN cell motility (ortholog); cell-cell adhesion (ortholog); positive regulation of cell migration involved in sprouting angiogenesis (ortholog); ASSOCIATED WITH epilepsy (ortholog); ROLANDIC EPILEPSY, INTELLECTUAL DISABILITY, AND SPEECH DYSPRAXIA, X-LINKED (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); excitatory synapse (ortholog) X 86231326 86252033 + 116888041 MODEL JAAIVD010000014;XM_032889439 XP_032745330 sushi repeat-containing protein SRPX2 protein-coding 625910143 LOC116908820 lys-63-specific deubiquitinase BRCC36-like 1 186915586 186918695 - 22301074;30032202 116908820 MODEL JAAIVD010000025;XM_032912242 XP_032768133 protein-coding 625910148 Lck LCK proto-oncogene, Src family tyrosine kinase ENCODES a protein that exhibits antigen binding (ortholog); ATPase binding (ortholog); CD4 receptor binding (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); CD27 signaling pathway (ortholog); cell surface receptor signaling pathway (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; glypican signaling pathway; ASSOCIATED WITH allergic conjunctivitis (ortholog); dilated cardiomyopathy (ortholog); human immunodeficiency virus infectious disease (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); endocytic vesicle (ortholog) 1 28575229 28602885 + 22301074;30032202 116896108 MODEL JAAIVD010000025;XM_032897075;XM_032897081 XP_032752966;XP_032752972 tyrosine-protein kinase Lck protein-coding 625910168 LOC116904657 U7 small nuclear RNA 6 43272179 43272241 + 116904657 MODEL JAAIVD010000024;XR_004388357 snrna 625910171 Dbn1 drebrin 1 ENCODES a protein that exhibits actin filament binding (ortholog); cytoskeletal motor inhibitor activity (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN actin filament organization (ortholog); cell communication by chemical coupling (ortholog); cell communication by electrical coupling (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); cognitive disorder (ortholog); Down syndrome (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); asymmetric synapse (ortholog) 14 73789411 73803625 - 30032202 116883307 MODEL JAAIVD010000009;XM_032884355;XM_032884357;XM_032884358;XM_032884359;XM_032884360;XM_032884361 XP_032740246;XP_032740248;XP_032740249;XP_032740250;XP_032740251;XP_032740252 drebrin protein-coding 625910199 LOC116890448 small nucleolar RNA SNORD103/SNORD85 1 27560095 27560177 - 116890448 MODEL JAAIVD010000025;XR_004386640 snorna 625910202 Kbtbd8 kelch repeat and BTB domain containing 8 INVOLVED IN neural crest cell development (ortholog); neural crest formation (ortholog); protein monoubiquitination (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog) 6 51818472 51831017 - 22301074 116903481 MODEL JAAIVD010000024;XM_032906047 XP_032761938 kelch repeat and BTB domain-containing protein 8 protein-coding 625910210 Osbpl9 oxysterol binding protein like 9 ENCODES a protein that exhibits phosphatidylserine-phosphatidylinositol-4-phosphate exchange activity (ortholog); INVOLVED IN lysosomal membrane organization (ortholog); phospholipid homeostasis (ortholog); phospholipid transfer to membrane (ortholog); FOUND IN endoplasmic reticulum-endosome membrane contact site (ortholog); endoplasmic reticulum-trans-Golgi network membrane contact site (ortholog); Golgi apparatus (ortholog) 1 45656920 45796259 + 30032202 116898987 MODEL JAAIVD010000025;XM_032900421;XM_032900430;XM_032900439;XM_032900447;XM_032900455 XP_032756312;XP_032756321;XP_032756330;XP_032756338;XP_032756346 oxysterol-binding protein-related protein 9 protein-coding 625910245 Atp2b3 ATPase plasma membrane Ca2+ transporting 3 ENCODES a protein that exhibits calcium ion transmembrane transporter activity (ortholog); P-type calcium transporter activity involved in regulation of presynaptic cytosolic calcium ion concentration (ortholog); PDZ domain binding (ortholog); INVOLVED IN calcium ion export across plasma membrane (ortholog); neural retina development (ortholog); regulation of cytosolic calcium ion concentration (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH adenoma (ortholog); adrenal cortical adenoma (ortholog); Developmental Disabilities (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); parallel fiber (ortholog) X 129120862 129188485 + 22301074;30032202 116888318 MODEL JAAIVD010000014;XM_032889591 XP_032745482 plasma membrane calcium-transporting ATPase 3 protein-coding 625910271 Wbp2nl WBP2 N-terminal like INVOLVED IN regulation of cytosolic calcium ion concentration (ortholog); FOUND IN sperm flagellum (ortholog); sperm head (ortholog) 1 252026571 252041883 + 30032202 116890056 MODEL JAAIVD010000025;XM_032890826 XP_032746717 postacrosomal sheath WW domain-binding protein protein-coding 625910280 LOC116893726 olfactory receptor 9I1-like 2 13789096 13790058 - 22301074;30032202 116893726 MODEL JAAIVD010000001;XM_032895439 XP_032751330 protein-coding 625910283 Trmt9b tRNA methyltransferase 9B (putative) ENCODES a protein that exhibits tRNA methyltransferase activity (ortholog) 13 50587750 50636992 - 22301074;30032202 116914629 MODEL JAAIVD010000008;XM_032919016;XM_032919017;XM_032919018 XP_032774907;XP_032774908;XP_032774909 probable tRNA methyltransferase 9B protein-coding 625910299 LOC116888102 stress-induced-phosphoprotein 1-like X 98270101 98284541 + 116888102 MODEL JAAIVD010000014 pseudo 625910300 LOC116890417 U7 small nuclear RNA 1 264756161 264756220 - 116890417 MODEL JAAIVD010000025;XR_004386617 snrna 625910303 LOC116904480 protein phosphatase 1 regulatory subunit 3B-like 6 142030360 142031061 + 30032202 116904480 MODEL JAAIVD010000024;XM_032907283 XP_032763174 protein-coding 625910306 Mgme1 mitochondrial genome maintenance exonuclease 1 ENCODES a protein that exhibits 5'-flap endonuclease activity (ortholog); single-stranded DNA 5'-3' DNA exonuclease activity (ortholog); INVOLVED IN mitochondrial DNA replication (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Emaciation (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) 5 123916009 123924590 + 30032202 116902041 MODEL JAAIVD010000023;XM_032904324;XM_032904326 XP_032760215;XP_032760217 protein-coding 625910318 Efna4 ephrin A4 ENCODES a protein that exhibits ephrin receptor binding (ortholog) 3 64332480 64336703 + 22301074;30032202 116896648 MODEL JAAIVD010000012;XM_032897977 XP_032753868 ephrin-A4 protein-coding 625910326 LOC116905558 protein max-like 7 49488917 49491010 - 116905558 MODEL JAAIVD010000026 pseudo 625910327 Park7 Parkinsonism associated deglycase ENCODES a protein that exhibits copper ion binding (ortholog); cupric ion binding (ortholog); cuprous ion binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); androgen receptor signaling pathway (ortholog); cellular detoxification of aldehyde (ortholog); PARTICIPATES IN Parkinson's disease pathway; transforming growth factor-beta signaling pathway; ASSOCIATED WITH amyotrophic lateral sclerosis-parkinsonism/dementia complex 1 (ortholog); cerebral infarction (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN axon (ortholog); cell body (ortholog); chromatin (ortholog) 1 9846468 9863080 + 30032202 116892438 MODEL JAAIVD010000025;XM_032894131;XM_032894141 XP_032750022;XP_032750032 protein/nucleic acid deglycase DJ-1 protein-coding 625910341 LOC116888773 eukaryotic translation initiation factor 4B-like X 75575626 75577560 - 116888773 MODEL JAAIVD010000014 pseudo 625910342 LOC116906381 small nucleolar RNA SNORD113/SNORD114 family 7 127264067 127264141 + 116906381 MODEL JAAIVD010000026;XR_004388651 snorna 625910345 Rps6kl1 ribosomal protein S6 kinase like 1 7 99243704 99258878 - 22301074 116905288 MODEL JAAIVD010000026;XM_032908148 XP_032764039 ribosomal protein S6 kinase-like 1 protein-coding 625910358 LOC116906724 zinc finger protein OZF-like 8 18464485 18478638 - 22301074 116906724 MODEL JAAIVD010000027;XM_032909535 XP_032765426 protein-coding 625910367 LOC116883184 chromobox protein homolog 3-like 14 32316189 32316614 - 116883184 MODEL JAAIVD010000009 pseudo 625910368 Uba5 ubiquitin like modifier activating enzyme 5 ENCODES a protein that exhibits protein homodimerization activity (ortholog); UFM1 activating enzyme activity (ortholog); zinc ion binding (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); megakaryocyte differentiation (ortholog); neuromuscular process (ortholog); ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 24 (ortholog); Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum membrane (ortholog) 8 95361207 95377698 - 30032202 116907422 MODEL JAAIVD010000027;XM_032910388;XM_032910389 XP_032766279;XP_032766280 ubiquitin-like modifier-activating enzyme 5 protein-coding 625910387 LOC116892133 galactoside 2-alpha-L-fucosyltransferase 3-like 2 153834947 153840634 + 22301074;30032202 116892133 MODEL JAAIVD010000001;XM_032893622 XP_032749513 protein-coding 625910392 LOC116888562 glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial-like X 59472563 59473145 + 116888562 MODEL JAAIVD010000014 pseudo 625910393 LOC116914024 uncharacterized LOC116914024 12 80873390 81277079 - 116914024 MODEL JAAIVD010000007;XR_004389658 ncrna 625910398 LOC116884948 rRNA 2'-O-methyltransferase fibrillarin-like 15 28459047 28460135 - 116884948 MODEL JAAIVD010000010 pseudo 625910399 Znfx1 zinc finger NFX1-type containing 1 ENCODES a protein that exhibits protein sequestering activity (ortholog); RNA binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); defense response to bacterium (ortholog); defense response to virus (ortholog); ASSOCIATED WITH genetic disease (ortholog); immunodeficiency 91 (ortholog); FOUND IN cytoplasmic stress granule (ortholog); cytosol (ortholog); mitochondrial outer membrane (ortholog) 5 150913680 150941143 + 22301074;30032202 116902315 MODEL JAAIVD010000023;XM_032904762;XM_032904763 XP_032760653;XP_032760654 NFX1-type zinc finger-containing protein 1 protein-coding 625910420 LOC116902842 GTPase IMAP family member 7-like 6 92247198 92251761 - 22301074 116902842 MODEL JAAIVD010000024;XM_032905172 XP_032761063 protein-coding 625910426 Tceal3 transcription elongation factor A like 3 X 88426145 88427044 + 116888486 MODEL JAAIVD010000014;XM_032889761 XP_032745652 transcription elongation factor A protein-like 3 protein-coding 625910431 LOC116893401 60S ribosomal protein L28-like 2 172098739 172101627 - 116893401 MODEL JAAIVD010000001 pseudo 625910432 LOC116913174 ubiquitin-conjugating enzyme E2 N-like 12 55471037 55484040 - 116913174 MODEL JAAIVD010000007 pseudo 625910433 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 56583670 56583741 + 116910808 MODEL JAAIVD010000002 trna 625910434 LOC116910678 small nucleolar RNA SNORA15 9 79618249 79618378 + 116910678 MODEL JAAIVD010000002;XR_004389209 snorna 625910437 LOC116910378 WAP four-disulfide core domain protein 18-like 9 87019931 87020988 - 22301074 116910378 MODEL JAAIVD010000002;XM_032914224 XP_032770115 protein-coding 625910442 Plekha4 pleckstrin homology domain containing A4 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN positive regulation of canonical Wnt signaling pathway (ortholog); positive regulation of Wnt signaling pathway, planar cell polarity pathway (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN extrinsic component of cytoplasmic side of plasma membrane (ortholog) 2 153960122 153983411 - 116892142 MODEL JAAIVD010000001;XM_032893632 XP_032749523 pleckstrin homology domain-containing family A member 4 protein-coding 625910466 Galnt11 polypeptide N-acetylgalactosaminyltransferase 11 ENCODES a protein that exhibits Notch binding (ortholog); polypeptide N-acetylgalactosaminyltransferase activity (ortholog); FOUND IN Golgi apparatus (ortholog) 6 154434392 154467483 + 30032202 116904225 MODEL JAAIVD010000024;XM_032907162 XP_032763053 protein-coding 625910482 LOC116887997 ATP-dependent RNA helicase DHX29-like X 75323514 75325624 - 30032202 116887997 MODEL JAAIVD010000014;XM_032889423 XP_032745314 protein-coding 625910487 LOC116894971 small nucleolar RNA SNORA4 2 98916867 98917007 - 116894971 MODEL JAAIVD010000001;XR_004387163 snorna 625910490 Ednrb endothelin receptor type B ENCODES a protein that exhibits endothelin receptor activity (ortholog); peptide hormone binding (ortholog); type 1 angiotensin receptor binding (ortholog); INVOLVED IN aldosterone metabolic process (ortholog); calcium ion transmembrane transport (ortholog); calcium-mediated signaling (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase signaling pathway; endothelin signaling pathway; inflammatory response pathway; ASSOCIATED WITH ABCD syndrome (ortholog); asthma (ortholog); Breast Neoplasms (ortholog); FOUND IN nuclear membrane (ortholog); plasma membrane (ortholog) 12 20907635 20937127 + 22301074 116913523 MODEL JAAIVD010000007;XM_032917725 XP_032773616 protein-coding 625910501 Ildr2 immunoglobulin like domain containing receptor 2 INVOLVED IN cell differentiation (ortholog); homeostasis of number of cells within a tissue (ortholog); insulin secretion (ortholog); FOUND IN tight junction (ortholog) 10 45359290 45426123 + 30032202 116911002 MODEL JAAIVD010000005;XM_032914727;XM_032914728;XM_032914729 XP_032770618;XP_032770619;XP_032770620 immunoglobulin-like domain-containing receptor 2 protein-coding 625910524 LOC116895976 iron-sulfur cluster assembly 1 homolog, mitochondrial-like 3 156968587 156968968 - 116895976 MODEL JAAIVD010000012 pseudo 625910525 Wnt2b Wnt family member 2B INVOLVED IN canonical Wnt signaling pathway (ortholog); cellular response to starvation (ortholog); chondrocyte differentiation (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH Diarrhea 9 (ortholog); endodermal sinus tumor (ortholog); Failure to Thrive (ortholog) 3 53158312 53166484 + 22301074;30032202 116896422 MODEL JAAIVD010000012;XM_032897568 XP_032753459 protein Wnt-2b protein-coding 625910533 Taf7l TATA-box binding protein associated factor 7 like INVOLVED IN flagellated sperm motility (ortholog); spermatid development (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) X 86784209 86796357 - 22301074;30032202 116888046 MODEL JAAIVD010000014;XM_032889442 XP_032745333 transcription initiation factor TFIID subunit 7-like protein-coding 625910548 Brd1 bromodomain containing 1 ENCODES a protein that exhibits histone H3K14 acetyltransferase activity (ortholog); histone H4K12 acetyltransferase activity (ortholog); histone H4K5 acetyltransferase activity (ortholog); INVOLVED IN positive regulation of erythrocyte differentiation (ortholog); response to electrical stimulus (ortholog); response to immobilization stress (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); bipolar disorder (ortholog); Experimental Seizures (ortholog); FOUND IN dendrite (ortholog); histone H3-K14 acetyltransferase complex (ortholog); MOZ/MORF histone acetyltransferase complex (ortholog) 1 258008312 258056352 - 22301074;30032202 116914801 MODEL JAAIVD010000025;XM_032919255;XM_032919263;XM_032919271;XR_004389771 XP_032775146;XP_032775154;XP_032775162 bromodomain-containing protein 1 protein-coding 625910571 C5 complement C5 ENCODES a protein that exhibits C5a anaphylatoxin chemotactic receptor binding (ortholog); chemokine activity (ortholog); wide pore channel activity (ortholog); INVOLVED IN chemotaxis (ortholog); complement activation (ortholog); complement activation, alternative pathway (ortholog); ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); adult respiratory distress syndrome (ortholog); asthma (ortholog); FOUND IN extracellular region (ortholog); membrane attack complex (ortholog); other organism cell membrane (ortholog) 5 586299 670215 + 22301074 116900035 MODEL JAAIVD010000023;XM_032901831 XP_032757722 protein-coding 625910616 Sirt5 sirtuin 5 ENCODES a protein that exhibits NAD+ binding (ortholog); protein-glutaryllysine deglutarylase activity (ortholog); protein-malonyllysine demalonylase activity (ortholog); INVOLVED IN negative regulation of cardiac muscle cell apoptotic process (ortholog); negative regulation of reactive oxygen species metabolic process (ortholog); peptidyl-lysine demalonylation (ortholog); PARTICIPATES IN histone modification pathway; Sirtuin mediated pathway; FOUND IN cytosol (ortholog); mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog) 14 62375274 62402861 + 22301074 116883383 MODEL JAAIVD010000009;XM_032884501 XP_032740392 NAD-dependent protein deacylase sirtuin-5, mitochondrial protein-coding 625910629 Dbh dopamine beta-hydroxylase ENCODES a protein that exhibits copper ion binding (ortholog); dopamine beta-monooxygenase activity (ortholog); INVOLVED IN associative learning (ortholog); behavioral response to ethanol (ortholog); blood vessel remodeling (ortholog); PARTICIPATES IN alkaptonuria pathway; aromatic L-amino acid decarboxylase deficiency pathway; catecholamine biosynthetic pathway; ASSOCIATED WITH Anorexia (ortholog); attention deficit hyperactivity disorder (ortholog); brain ischemia (ortholog); FOUND IN apical part of cell (ortholog); axon (ortholog); dendrite (ortholog) 5 9479774 9496457 - 22301074;30032202 116900070 MODEL JAAIVD010000023;XM_032901860 XP_032757751 protein-coding 625910644 LOC116893111 40S ribosomal protein S21-like 2 68701391 68701676 - 116893111 MODEL JAAIVD010000001 pseudo 625910645 Sptbn5 spectrin beta, non-erythrocytic 5 ENCODES a protein that exhibits actin filament binding (ortholog); dynactin binding (ortholog); dynein intermediate chain binding (ortholog); INVOLVED IN Golgi organization (ortholog); lysosomal transport (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN apical cortex (ortholog); cortical cytoskeleton (ortholog); cytoplasm (ortholog) 5 98201483 98237994 - 30032202 116901825 MODEL JAAIVD010000023;XM_032903986 XP_032759877 spectrin beta chain, non-erythrocytic 5 protein-coding 625910708 Trnan-guu transfer RNA asparagine (anticodon GUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 1 154632937 154633010 - 116890643 MODEL JAAIVD010000025 trna 625910709 LOC116885916 prothymosin alpha-like 1 3032278 3032578 - 116885916 MODEL JAAIVD010000025 pseudo 625910710 LOC116894276 vomeronasal type-1 receptor 4-like 2 121585674 121586630 - 22301074;30032202 116894276 MODEL JAAIVD010000001;XM_032895988 XP_032751879 protein-coding 625910714 LOC116912723 uncharacterized LOC116912723 11 14132514 14141263 - 116912723 MODEL JAAIVD010000006;XR_004389474 ncrna 625910726 LOC116914173 U6 spliceosomal RNA 12 9468788 9468895 + 116914173 MODEL JAAIVD010000007;XR_004389717 snrna 625910729 Strn striatin ENCODES a protein that exhibits armadillo repeat domain binding (ortholog); calmodulin binding (ortholog); nuclear estrogen receptor binding (ortholog); INVOLVED IN dendrite development (ortholog); locomotory behavior (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); FOUND IN bicellular tight junction (ortholog); dendritic spine (ortholog); FAR/SIN/STRIPAK complex (ortholog) 7 14494995 14575713 + 30032202 116905904 MODEL JAAIVD010000026;XM_032908894 XP_032764785 protein-coding 625910751 Pabpc1l2b poly(A) binding protein cytoplasmic 1 like 2B X 60289071 60291562 + 30032202 116888548 MODEL JAAIVD010000014;XM_032889856 XP_032745747 polyadenylate-binding protein 1-like 2 protein-coding 625910756 LOC116887232 elongation factor 2-like 18 10856923 10859615 - 116887232 MODEL JAAIVD010000013 pseudo 625910757 Rpsa ribosomal protein SA ENCODES a protein that exhibits DNA binding (ortholog); laminin binding (ortholog); ribosome binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cell-cell adhesion (ortholog); epithelial cell differentiation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Animal Disease Models (ortholog); arrhythmogenic right ventricular dysplasia 5 (ortholog); Diamond-Blackfan anemia (ortholog); FOUND IN basement membrane (ortholog); cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog) 8 111355541 111359462 + 22301074;30032202 116907936 MODEL JAAIVD010000027;XM_032911153 XP_032767044 40S ribosomal protein SA protein-coding 625910768 Vwf von Willebrand factor ENCODES a protein that exhibits collagen binding (ortholog); identical protein binding (ortholog); immunoglobulin binding (ortholog); INVOLVED IN activation of blood coagulation via clotting cascade (ortholog); blood coagulation (ortholog); cell adhesion (ortholog); PARTICIPATES IN platelet aggregation pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); external side of plasma membrane (ortholog) 6 22217359 22342060 - 22301074;30032202 116903854 MODEL JAAIVD010000024;XM_032906594 XP_032762485 protein-coding 625910822 LOC116899545 U3 small nucleolar RNA-associated protein 14 homolog B 4 151877022 151881546 + 30032202 116899545 MODEL JAAIVD010000003;XM_032901436 XP_032757327 protein-coding 625910828 LOC116895366 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3-like 3 50908578 50908885 + 22301074;30032202 116895366 MODEL JAAIVD010000012;XM_032896663 XP_032752554 protein-coding 625910832 Shc1 SHC adaptor protein 1 ENCODES a protein that exhibits ephrin receptor binding (ortholog); epidermal growth factor binding (ortholog); epidermal growth factor receptor binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); angiogenesis (ortholog); animal organ regeneration (ortholog); PARTICIPATES IN brain-derived neurotrophic factor signaling pathway; epidermal growth factor/neuregulin signaling pathway; erythropoietin signaling pathway; ASSOCIATED WITH Albuminuria (ortholog); Alzheimer's disease (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); FOUND IN cytosol (ortholog); endosome membrane (ortholog); plasma membrane (ortholog) 3 64236116 64247635 - 22301074;30032202 116896639 MODEL JAAIVD010000012;XM_032897957;XM_032897958 XP_032753848;XP_032753849 SHC-transforming protein 1 protein-coding 625910852 Esrp2 epithelial splicing regulatory protein 2 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); branching involved in salivary gland morphogenesis (ortholog); epithelial tube branching involved in lung morphogenesis (ortholog); ASSOCIATED WITH cleft lip (ortholog); COVID-19 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 17 25869825 25876768 - 22301074;30032202 116886703 MODEL JAAIVD010000011;XM_032888209;XM_032888210;XM_032888211 XP_032744100;XP_032744101;XP_032744102 protein-coding 625910883 LOC116899938 U2 spliceosomal RNA 4 126057343 126057535 - 116899938 MODEL JAAIVD010000003;XR_004387905 snrna 625910886 Gnai1 G protein subunit alpha i1 ENCODES a protein that exhibits adenylate cyclase inhibitor activity (ortholog); D2 dopamine receptor binding (ortholog); G protein activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting serotonin receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphai protein family; endothelin signaling pathway; epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH amnestic disorder (ortholog); Developmental Disease (ortholog); epilepsy (ortholog); FOUND IN cell cortex (ortholog); centrosome (ortholog); cytoplasm (ortholog) 6 147629014 147711232 - 22301074;30032202 116904160 MODEL JAAIVD010000024;XM_032907058 XP_032762949 guanine nucleotide-binding protein G(i) subunit alpha-1 protein-coding 625910898 Chrm2 cholinergic receptor muscarinic 2 ENCODES a protein that exhibits arrestin family protein binding (ortholog); G protein-coupled acetylcholine receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); G protein-coupled acetylcholine receptor signaling pathway (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphai protein family; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; ASSOCIATED WITH asthma (ortholog); bipolar disorder (ortholog); Bradycardia (ortholog); FOUND IN asymmetric synapse (ortholog); axon terminus (ortholog); cholinergic synapse (ortholog) 6 103297642 103435482 - 22301074;30032202 116903963 MODEL JAAIVD010000024;XM_032906757 XP_032762648 muscarinic acetylcholine receptor M2 protein-coding 625910905 LOC116900243 olfactory receptor 998-like 5 62949473 62950417 + 22301074;30032202 116900243 MODEL JAAIVD010000023;XM_032901994 XP_032757885 protein-coding 625910908 Tma16 translation machinery associated 16 homolog ENCODES a protein that exhibits preribosome binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN ribosomal large subunit biogenesis (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 13 22767796 22783870 + 30032202 116914669 MODEL JAAIVD010000008;XM_032919074 XP_032774965 translation machinery-associated protein 16 protein-coding 625910919 Bbs2 Bardet-Biedl syndrome 2 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN adult behavior (ortholog); artery smooth muscle contraction (ortholog); brain morphogenesis (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl Syndrome 1/2, Digenic (ortholog); FOUND IN BBSome (ortholog); ciliary basal body (ortholog); ciliary membrane (ortholog) 17 977093 1011966 - 22301074;30032202 116886265 MODEL JAAIVD010000011;XM_032887687 XP_032743578 Bardet-Biedl syndrome 2 protein protein-coding 625910940 LOC116889507 small nucleolar RNA SNORA17 X 81046341 81046471 + 116889507 MODEL JAAIVD010000014;XR_004386453 snorna 625910943 Dnajc12 DnaJ heat shock protein family (Hsp40) member C12 ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog) 18 23312976 23328428 - 30032202 116887000 MODEL JAAIVD010000013;XM_032888482 XP_032744373 dnaJ homolog subfamily C member 12 protein-coding 625910952 Fabp1 fatty acid binding protein 1 ENCODES a protein that exhibits antioxidant activity (ortholog); bile acid binding (ortholog); binding (ortholog); INVOLVED IN acylglycerol biosynthetic process (ortholog); acylglycerol metabolic process (ortholog); adult feeding behavior (ortholog); ASSOCIATED WITH acute kidney tubular necrosis (ortholog); Acute Liver Failure (ortholog); end stage renal disease (ortholog); FOUND IN apical cortex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 6 74217675 74221431 + 30032202 116903678 MODEL JAAIVD010000024;XM_032906338 XP_032762229 fatty acid-binding protein, liver protein-coding 625910960 Ppip5k2 diphosphoinositol pentakisphosphate kinase 2 ENCODES a protein that exhibits 5-diphosphoinositol pentakisphosphate 1-kinase activity (ortholog); ATP binding (ortholog); inositol hexakisphosphate kinase activity (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 100 (ortholog); keratoconus (ortholog); nonsyndromic deafness (ortholog); FOUND IN cytosol (ortholog) 4 168748322 168813883 + 30032202 116899684 MODEL JAAIVD010000003;XM_032901706;XM_032901707 XP_032757597;XP_032757598 inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 protein-coding 625910998 Fer1l5 fer-1 like family member 5 INVOLVED IN binding of sperm to zona pellucida (ortholog); membrane fusion involved in acrosome reaction (ortholog); myoblast fusion (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); plasma membrane (ortholog) 4 112588822 112640898 + 22301074;30032202 116899287 MODEL JAAIVD010000003;XM_032900919 XP_032756810 fer-1-like protein 5 protein-coding 625911054 Clec3b C-type lectin domain family 3 member B ENCODES a protein that exhibits calcium ion binding (ortholog); heparin binding (ortholog); kringle domain binding (ortholog); INVOLVED IN bone mineralization (ortholog); ossification (ortholog); positive regulation of plasminogen activation (ortholog); ASSOCIATED WITH osteoarthritis (ortholog); retinal macular dystrophy 4 (ortholog); Scheuermann's disease (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); granular component (ortholog) 8 114286582 114292325 + 116907024 MODEL JAAIVD010000027;XM_032909964 XP_032765855 tetranectin protein-coding 625911061 Tmem220 transmembrane protein 220 9 46628722 46637293 + 116909167 MODEL JAAIVD010000002;XM_032912657 XP_032768548 protein-coding 625911071 Fbxo8 F-box protein 8 INVOLVED IN ubiquitin-dependent protein catabolic process (ortholog); FOUND IN ubiquitin ligase complex (ortholog) 13 32126087 32169593 + 22301074 116915079 MODEL JAAIVD010000008;XM_032919501;XM_032919502;XM_032919503 XP_032775392;XP_032775393;XP_032775394 F-box only protein 8 protein-coding 625911087 LOC116884908 protocadherin alpha-6-like 15 7400804 7403721 - 22301074 116884908 MODEL JAAIVD010000010;XM_032886130 XP_032742021 protein-coding 625911091 LOC116894188 olfactory receptor 478 2 106062652 106063596 - 22301074;30032202 116894188 MODEL JAAIVD010000001;XM_032895903 XP_032751794 protein-coding 625911094 L3mbtl1 L3MBTL histone methyl-lysine binding protein 1 ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); histone H1 reader activity (ortholog); INVOLVED IN chromatin organization (ortholog); constitutive heterochromatin formation (ortholog); hemopoiesis (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; histone modification pathway; ASSOCIATED WITH breast cancer (ortholog); genetic disease (ortholog); FOUND IN chromatin (ortholog); condensed chromosome (ortholog); nuclear body (ortholog) 5 155007706 155034100 - 22301074 116902390 MODEL JAAIVD010000023;XM_032904908 XP_032760799 lethal(3)malignant brain tumor-like protein 1 protein-coding 625911119 Raver1 ribonucleoprotein, PTB binding 1 ASSOCIATED WITH genetic disease (ortholog); FOUND IN nucleoplasm (ortholog) 8 17335785 17354596 - 22301074 116906861 MODEL JAAIVD010000027;XM_032909764 XP_032765655 ribonucleoprotein PTB-binding 1 protein-coding 625911136 LOC116895606 uncharacterized LOC116895606 3 157721317 157724377 - 116895606 MODEL JAAIVD010000012;XR_004387293 ncrna 625911140 Htt huntingtin ENCODES a protein that exhibits beta-tubulin binding (ortholog); diazepam binding (ortholog); dynactin binding (ortholog); INVOLVED IN anatomical structure morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); associative learning (ortholog); PARTICIPATES IN Huntington's disease pathway; ASSOCIATED WITH Cadmium Poisoning (ortholog); cerebral palsy (ortholog); genetic disease (ortholog); FOUND IN autophagosome (ortholog); axon (ortholog); centriole (ortholog) 11 70172908 70315186 - 22301074;30032202 116911942 MODEL JAAIVD010000006;XM_032915843 XP_032771734 protein-coding 625911211 LOC116912532 YTH domain-containing family protein 2 11 45341388 45343303 + 30032202 116912532 MODEL JAAIVD010000006;XM_032916636 XP_032772527 protein-coding 625911216 LOC116883610 basic proline-rich protein-like 14 65422130 65424353 + 116883610 MODEL JAAIVD010000009;XM_032884800 XP_032740691 protein-coding 625911222 Tyw5 tRNA-yW synthesizing protein 5 ENCODES a protein that exhibits iron ion binding (ortholog); protein homodimerization activity (ortholog); tRNA binding (ortholog); INVOLVED IN wybutosine biosynthetic process (ortholog) 4 132242199 132260048 - 30032202 116899402 MODEL JAAIVD010000003;XM_032901132;XM_032901133;XM_032901134;XM_032901135;XM_032901136;XM_032901137;XM_032901138 XP_032757023;XP_032757024;XP_032757025;XP_032757026;XP_032757027;XP_032757028;XP_032757029 tRNA wybutosine-synthesizing protein 5 protein-coding 625911252 Smim14 small integral membrane protein 14 INVOLVED IN blastocyst hatching (ortholog); FOUND IN endoplasmic reticulum (ortholog) 11 22474692 22523569 - 30032202 116912095 MODEL JAAIVD010000006;XM_032915984;XM_032915985;XM_032915986 XP_032771875;XP_032771876;XP_032771877 protein-coding 625911267 Mboat4 membrane bound ghrelin O-acyltransferase MBOAT4 ENCODES a protein that exhibits acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); serine O-acyltransferase activity (ortholog); INVOLVED IN peptidyl-serine octanoylation (ortholog); protein acylation (ortholog); protein decanoylation (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) 13 52906060 52914245 - 30032202 116914647 MODEL JAAIVD010000008;XM_032919043;XM_032919044 XP_032774934;XP_032774935 ghrelin O-acyltransferase;membrane bound O-acyltransferase domain containing 4 protein-coding 625911275 Nek8 NIMA related kinase 8 INVOLVED IN animal organ morphogenesis (ortholog); determination of left/right symmetry (ortholog); heart development (ortholog); ASSOCIATED WITH autosomal recessive polycystic kidney disease (ortholog); cystic kidney disease (ortholog); genetic disease (ortholog); FOUND IN ciliary base (ortholog); ciliary inversin compartment (ortholog); cilium (ortholog) 9 92262374 92273475 + 22301074 116909044 MODEL JAAIVD010000002;XM_032912525;XM_032912526 XP_032768416;XP_032768417 serine/threonine-protein kinase Nek8 protein-coding 625911298 LOC116890037 60S ribosomal protein L19-like 1 202699766 202700344 + 116890037 MODEL JAAIVD010000025 pseudo 625911299 Map3k19 mitogen-activated protein kinase kinase kinase 19 10 7854308 7897185 + 22301074 116911242 MODEL JAAIVD010000005;XM_032915145 XP_032771036 protein-coding 625911317 LOC116913287 60S ribosomal protein L15-like 12 90297643 90298113 + 22301074;30032202 116913287 MODEL JAAIVD010000007;XM_032917413 XP_032773304 protein-coding 625911321 LOC116892132 uncharacterized LOC116892132 1 6446528 6448426 - 116892132 MODEL JAAIVD010000025;XR_004386915 ncrna 625911325 Nherf2 NHERF family PDZ scaffold protein 2 ENCODES a protein that exhibits beta-catenin binding (ortholog); identical protein binding (ortholog); low-density lipoprotein particle receptor binding (ortholog); INVOLVED IN inner ear development (ortholog); negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); positive regulation of monoatomic ion transmembrane transport (ortholog); PARTICIPATES IN parathyroid hormone signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH hypertension (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); nucleus (ortholog) 9 1920530 1930703 - 30032202 116909632 MODEL JAAIVD010000002;XM_032913271;XM_032913273 XP_032769162;XP_032769164 Slc9a3r2 Na(+)/H(+) exchange regulatory cofactor NHE-RF2;SLC9A3 regulator 2 protein-coding 625911339 Cnbd2 cyclic nucleotide binding domain containing 2 ENCODES a protein that exhibits cAMP binding (ortholog); INVOLVED IN spermatogenesis (ortholog); FOUND IN cytosol (ortholog); sperm midpiece (ortholog) 5 135661652 135724633 + 30032202 116902203 MODEL JAAIVD010000023;XM_032904581 XP_032760472 cyclic nucleotide-binding domain-containing protein 2 protein-coding 625911357 LOC116889557 U2 spliceosomal RNA X 108620138 108620215 - 116889557 MODEL JAAIVD010000014 pseudo 625911358 LOC116884138 small nucleolar RNA SNORD113/SNORD114 family 14 74947911 74947994 - 116884138 MODEL JAAIVD010000009 pseudo 625911359 Qprt quinolinate phosphoribosyltransferase ENCODES a protein that exhibits identical protein binding (ortholog); nicotinate-nucleotide diphosphorylase (carboxylating) activity (ortholog); INVOLVED IN 'de novo' NAD+ biosynthetic process from L-tryptophan (ortholog); NAD+ biosynthetic process (ortholog); quinolinate catabolic process (ortholog); PARTICIPATES IN de novo nicotinamide adenine dinucleotide biosynthetic pathway; niacin metabolic pathway; ASSOCIATED WITH Huntington's disease (ortholog); pellagra (ortholog); FOUND IN catalytic complex (ortholog); cytosol (ortholog) 2 74770714 74786299 + 22301074;30032202 116893899 MODEL JAAIVD010000001;XM_032895622 XP_032751513 nicotinate-nucleotide pyrophosphorylase [carboxylating] protein-coding 625911367 LOC116897948 olfactory receptor 5AC1-like 4 43096745 43097665 + 22301074;30032202 116897948 MODEL JAAIVD010000003;XM_032899347 XP_032755238 protein-coding 625911370 LOC116914575 translationally-controlled tumor protein-like 13 15194480 15195010 + 116914575 MODEL JAAIVD010000008 pseudo 625911371 LOC116904110 heterogeneous nuclear ribonucleoproteins A2/B1-like 6 135506763 135507842 + 22301074 116904110 MODEL JAAIVD010000024;XM_032906988 XP_032762879 protein-coding 625911376 Aqr aquarius intron-binding spliceosomal factor ENCODES a protein that exhibits 3'-5' RNA helicase activity (ortholog); single-stranded RNA binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN catalytic step 2 spliceosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 5 92318661 92389413 - 22301074;30032202 116900953 MODEL JAAIVD010000023;XM_032902591 XP_032758482 RNA helicase aquarius protein-coding 625911415 Rtn2 reticulon 2 INVOLVED IN gene expression (ortholog); intracellular protein transmembrane transport (ortholog); negative regulation of amyloid-beta formation (ortholog); ASSOCIATED WITH autosomal recessive distal hereditary motor neuronopathy 11 (ortholog); genetic disease (ortholog); hereditary spastic paraplegia (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); intermediate filament (ortholog) 2 171324444 171336284 - 116892539 MODEL JAAIVD010000001;XM_032894300 XP_032750191 reticulon-2 protein-coding 625911429 Adgrg7 adhesion G protein-coupled receptor G7 ASSOCIATED WITH hepatocellular carcinoma (ortholog) 4 40821027 40883054 - 22301074 116898906 MODEL JAAIVD010000003;XM_032900313 XP_032756204 adhesion G-protein coupled receptor G7 protein-coding 625911449 LOC116908329 U6 spliceosomal RNA 8 99237619 99237715 + 116908329 MODEL JAAIVD010000027 pseudo 625911450 LOC116911125 macrophage migration inhibitory factor-like 10 20649014 20649356 + 30032202 116911125 MODEL JAAIVD010000005;XM_032914972 XP_032770863 protein-coding 625911453 LOC116895750 ETS translocation variant 5-like 3 35868285 35869179 + 116895750 MODEL JAAIVD010000012 pseudo 625911454 Cenph centromere protein H ENCODES a protein that exhibits kinetochore binding (ortholog); ASSOCIATED WITH Habitual Abortions (ortholog); FOUND IN chromosome (ortholog); kinetochore (ortholog); nucleoplasm (ortholog) 3 158139494 158152995 - 22301074;30032202 116897100 MODEL JAAIVD010000012;XM_032898743 XP_032754634 protein-coding 625911467 Exoc1l exocyst complex component 1 like 11 33224900 33245766 + 116912835 MODEL JAAIVD010000006;XM_032917023 XP_032772914 exocyst complex component 1-like protein-coding 625911473 Enpp6 ectonucleotide pyrophosphatase/phosphodiesterase 6 ENCODES a protein that exhibits glycerophosphocholine cholinephosphodiesterase activity (ortholog); glycerophosphodiester phosphodiesterase activity (ortholog); phosphoric diester hydrolase activity (ortholog); INVOLVED IN choline metabolic process (ortholog); lipid metabolic process (ortholog); ASSOCIATED WITH autistic disorder (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) 13 40921611 41025932 - 116914630 MODEL JAAIVD010000008;XM_032919021 XP_032774912 glycerophosphocholine cholinephosphodiesterase ENPP6 protein-coding 625911485 Crem cAMP responsive element modulator ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); fatty acid metabolic process (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); Cardiomegaly (ortholog); Chloracne (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 14 29773638 29838928 - 22301074;30032202 116883296 MODEL JAAIVD010000009;XM_032884306;XM_032884307;XM_032884308;XM_032884309;XM_032884310;XM_032884312;XM_032884313;XM_032884314;XM_032884315;XM_032884316;XM_032884317;XM_032884318;XM_032884319;XM_032884320;XM_032884321;XM_032884322;XM_032884323;XM_032884324;XM_032884325;XM_032884326;XM_032884328;XM_032884329;XM_032884330;XM_032884331;XM_032884332;XM_032884333;XM_032884334;XM_032884335;XM_032884336;XM_032884337;XM_032884338;XM_032884339;XM_032884340;XM_032884341;XM_032884342;XM_032884344 XP_032740197;XP_032740198;XP_032740199;XP_032740200;XP_032740201;XP_032740203;XP_032740204;XP_032740205;XP_032740206;XP_032740207;XP_032740208;XP_032740209;XP_032740210;XP_032740211;XP_032740212;XP_032740213;XP_032740214;XP_032740215;XP_032740216;XP_032740217;XP_032740219;XP_032740220;XP_032740221;XP_032740222;XP_032740223;XP_032740224;XP_032740225;XP_032740226;XP_032740227;XP_032740228;XP_032740229;XP_032740230;XP_032740231;XP_032740232;XP_032740233;XP_032740235 cAMP-responsive element modulator protein-coding 625911601 LOC116891517 developmental pluripotency-associated protein 3-like 2 75246215 75247108 + 116891517 MODEL JAAIVD010000001 pseudo 625911602 LOC116900377 olfactory receptor 5L1-like 5 69540608 69541546 - 22301074;30032202 116900377 MODEL JAAIVD010000023;XM_032902126 XP_032758017 protein-coding 625911605 LOC116904677 small nucleolar RNA SNORA3/SNORA45 family 6 6612513 6612634 + 116904677 MODEL JAAIVD010000024;XR_004388374 snorna 625911608 LOC116890038 small nuclear ribonucleoprotein E-like 1 204347064 204351509 - 116890038 MODEL JAAIVD010000025 pseudo 625911609 Coq5 coenzyme Q5, methyltransferase ENCODES a protein that exhibits 2-methoxy-6-polyprenyl-1,4-benzoquinol methyltransferase activity (ortholog); INVOLVED IN methylation (ortholog); ubiquinone biosynthetic process (ortholog); PARTICIPATES IN ubiquinone biosynthetic pathway; ASSOCIATED WITH COVID-19 (ortholog); intellectual disability (ortholog); primary coenzyme Q10 deficiency 9 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 16 38527049 38547376 - 22301074;30032202 116885545 MODEL JAAIVD010000004;XM_032886839 XP_032742730 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial protein-coding 625911620 LOC116898217 uncharacterized LOC116898217 4 146886798 146892101 - 116898217 MODEL JAAIVD010000003;XR_004387644 ncrna 625911624 LOC116906167 nucleoporin GLE1-like 7 101835186 101837958 + 116906167 MODEL JAAIVD010000026 pseudo 625911625 Il6 interleukin 6 ENCODES a protein that exhibits cytokine activity (ortholog); growth factor activity (ortholog); histone H3K9ac reader activity (ortholog); INVOLVED IN autocrine signaling (ortholog); bone remodeling (ortholog); branching involved in salivary gland morphogenesis (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; interleukin-27 signaling pathway; interleukin-6 signaling pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Acute Hepatitis (ortholog); acute kidney failure (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog); interleukin-6 receptor complex (ortholog) 6 158438075 158442699 + 22301074;30032202 116903029 MODEL JAAIVD010000024;XM_032905335 XP_032761226 interleukin-6 protein-coding 625911634 Slc25a13 solute carrier family 25 member 13 ENCODES a protein that exhibits 3-sulfino-L-alanine: proton, glutamate antiporter activity (ortholog); acidic amino acid transmembrane transporter activity (ortholog); aspartate:glutamate, proton antiporter activity (ortholog); INVOLVED IN aspartate transmembrane transport (ortholog); ATP biosynthetic process (ortholog); cellular respiration (ortholog); PARTICIPATES IN nicotinamide adenine dinucleotide metabolic pathway; ASSOCIATED WITH adult-onset type II citrullinemia (ortholog); Bone Fractures (ortholog); citrullinemia (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 6 132418148 132599011 + 22301074;30032202 116904093 MODEL JAAIVD010000024;XM_032906962 XP_032762853 calcium-binding mitochondrial carrier protein Aralar2 protein-coding 625911656 LOC116906386 small nucleolar RNA SNORD113/SNORD114 family 7 127244522 127244595 + 116906386 MODEL JAAIVD010000026;XR_004388656 snorna 625911659 Cs citrate synthase ENCODES a protein that exhibits acyltransferase activity, acyl groups converted into alkyl on transfer (ortholog); citrate synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN acetyl-CoA metabolic process (ortholog); carbohydrate metabolic process (ortholog); citrate metabolic process (ortholog); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; mitochondrial complex II deficiency pathway; ASSOCIATED WITH atrial fibrillation (ortholog); bipolar disorder (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 1 155807855 155832734 + 22301074;30032202 116905995 MODEL JAAIVD010000025;XM_032909031 XP_032764922 citrate synthase, mitochondrial protein-coding 625911674 LOC116910428 uncharacterized LOC116910428 9 1007963 1008584 - 116910428 MODEL JAAIVD010000002;XR_004389151 ncrna 625911679 Slc39a5 solute carrier family 39 member 5 ENCODES a protein that exhibits zinc ion transmembrane transporter activity (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cellular response to zinc ion starvation (ortholog); eye development (ortholog); ASSOCIATED WITH Myopia 24, Autosomal Dominant (ortholog); FOUND IN basolateral plasma membrane (ortholog) 1 155865924 155871235 - 22301074;30032202 116906057 MODEL JAAIVD010000025;XM_032909099 XP_032764990 zinc transporter ZIP5 protein-coding 625911695 LOC116883964 Ig kappa chain V-II region 26-10-like 14 25508362 25509121 - 116883964 MODEL JAAIVD010000009 pseudo 625911696 Ppil3 peptidylprolyl isomerase like 3 PARTICIPATES IN spliceosome pathway; FOUND IN catalytic step 2 spliceosome (ortholog) 4 133959637 133971938 + 22301074;30032202 116898518 MODEL JAAIVD010000003;XM_032899744 XP_032755635 peptidyl-prolyl cis-trans isomerase-like 3 protein-coding 625911705 Pycr2 pyrroline-5-carboxylate reductase 2 ENCODES a protein that exhibits pyrroline-5-carboxylate reductase activity (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); L-proline biosynthetic process (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; guanidinoacetate methyltransferase deficiency pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); genetic disease (ortholog); hypomyelinating leukodystrophy 10 (ortholog); FOUND IN mitochondrion (ortholog) 10 59218103 59221867 + 22301074;30032202 116911500 MODEL JAAIVD010000005;XM_032915488 XP_032771379 protein-coding 625911716 LOC116897995 glyceraldehyde-3-phosphate dehydrogenase-like 4 56649008 56650007 + 116897995 MODEL JAAIVD010000003 pseudo 625911717 Slc6a14 solute carrier family 6 member 14 ENCODES a protein that exhibits (R)-carnitine transmembrane transporter activity (ortholog); alanine transmembrane transporter activity (ortholog); aromatic amino acid transmembrane transporter activity (ortholog); INVOLVED IN (R)-carnitine transmembrane transport (ortholog); alanine transport (ortholog); amino acid import across plasma membrane (ortholog); ASSOCIATED WITH Acidoses (ortholog); celiac disease (ortholog); cystic fibrosis (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog) X 100296974 100320585 + 22301074;30032202 116889128 MODEL JAAIVD010000014;XM_032890299 XP_032746190 sodium- and chloride-dependent neutral and basic amino acid transporter B(0+) protein-coding 625911735 LOC116883215 60S ribosomal protein L19-like 14 45962318 45983320 + 116883215 MODEL JAAIVD010000009 pseudo 625911736 Epx eosinophil peroxidase ENCODES a protein that exhibits lactoperoxidase activity (ortholog); peroxidase activity (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); defense response to nematode (ortholog); eosinophil migration (ortholog); ASSOCIATED WITH allergic asthma (ortholog); asthma (ortholog); Eosinophilic Asthma (ortholog) 9 82922972 82932986 + 22301074;30032202 116909298 MODEL JAAIVD010000002;XM_032912839 XP_032768730 protein-coding 625911750 LOC116884249 protein RCC2-like 15 33549820 33551791 + 116884249 MODEL JAAIVD010000010 pseudo 625911751 Them4 thioesterase superfamily member 4 ENCODES a protein that exhibits long-chain fatty acyl-CoA hydrolase activity (ortholog); INVOLVED IN fatty acid metabolic process (ortholog); negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); regulation of mitochondrial membrane permeability involved in apoptotic process (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) 3 62841218 62860992 - 116896593 MODEL JAAIVD010000012;XM_032897834 XP_032753725 acyl-coenzyme A thioesterase THEM4 protein-coding 625911761 LOC116891836 NADH-cytochrome b5 reductase 2 ENCODES a protein that exhibits cytochrome-b5 reductase activity, acting on NAD(P)H (ortholog); FOUND IN Golgi apparatus (ortholog); membrane (ortholog) 2 105858507 105866926 - 22301074;30032202 116891836 MODEL JAAIVD010000001;XM_032893204;XM_032893205 XP_032749095;XP_032749096 protein-coding 625911777 LOC116888934 prostaglandin E2 receptor EP2 subtype-like X 429002 438232 + 116888934 MODEL JAAIVD010000014 pseudo 625911778 Phb2 prohibitin 2 ENCODES a protein that exhibits binding (ortholog); identical protein binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); B cell activation (ortholog); cell migration (ortholog); PARTICIPATES IN estrogen signaling pathway; mitochondria fusion pathway; tamoxifen pharmacodynamics pathway; ASSOCIATED WITH Brain Injuries (ortholog); FOUND IN axon (ortholog); cell periphery (ortholog); cell surface (ortholog) 6 23167153 23171925 - 22301074;30032202 116903285 MODEL JAAIVD010000024;XM_032905708 XP_032761599 prohibitin-2 protein-coding 625911792 LOC116897495 small nucleolar RNA Z39 3 210651092 210651151 + 116897495 MODEL JAAIVD010000012;XR_004387516 snorna 625911795 Nqo1 NAD(P)H quinone dehydrogenase 1 ENCODES a protein that exhibits identical protein binding (ortholog); NAD(P)H dehydrogenase (quinone) activity (ortholog); NADH dehydrogenase (quinone) (non-electrogenic) activity (ortholog); INVOLVED IN cell redox homeostasis (ortholog); cellular response to hydrogen peroxide (ortholog); cellular response to metal ion (ortholog); PARTICIPATES IN doxorubicin pharmacokinetics pathway; nuclear factor, erythroid 2 like 2 signaling pathway; oxidative stress response pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) 17 27113177 27129220 - 2504488;30032202 116886434 MODEL JAAIVD010000011;X17464;XM_032887917 XP_032743808 NAD(P)H dehydrogenase [quinone] 1 protein-coding 625911805 Cabin1 calcineurin binding protein 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein phosphatase 2B binding (ortholog); INVOLVED IN DNA replication-dependent chromatin assembly (ortholog); negative regulation of apoptotic process (ortholog); response to activity (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); Experimental Arthritis (ortholog); multicentric Castleman disease (ortholog); FOUND IN nucleoplasm (ortholog) 18 11681347 11802459 + 22301074;30032202 116886808 MODEL JAAIVD010000013;XM_032888234;XM_032888235;XM_032888236 XP_032744125;XP_032744126;XP_032744127 calcineurin-binding protein cabin-1 protein-coding 625911850 Cntnap2 contactin associated protein 2 ENCODES a protein that exhibits enzyme binding (ortholog); PDZ domain binding (ortholog); protease binding (ortholog); INVOLVED IN action potential initiation (ortholog); adult behavior (ortholog); associative learning (ortholog); ASSOCIATED WITH articulation disorder (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN axolemma (ortholog); axon (ortholog); axon initial segment (ortholog) 6 93464514 95618764 - 116904389 MODEL JAAIVD010000024;XM_032907255 XP_032763146 contactin-associated protein-like 2 protein-coding 625911878 LOC116893223 olfactory receptor 14C36-like 2 114854435 114855430 + 22301074 116893223 MODEL JAAIVD010000001;XM_032895104 XP_032750995 protein-coding 625911881 LOC116908070 uncharacterized LOC116908070 8 64977228 64981067 - 116908070 MODEL JAAIVD010000027;XR_004388872 ncrna 625911886 Evl Enah/Vasp-like ENCODES a protein that exhibits profilin binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN actin polymerization or depolymerization (ortholog); cellular response to type II interferon (ortholog); negative regulation of epithelial cell migration (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); focal adhesion (ortholog); lamellipodium (ortholog) 7 126232611 126353336 + 30032202 116905451 MODEL JAAIVD010000026;XM_032908405;XM_032908406;XM_032908407 XP_032764296;XP_032764297;XP_032764298 ena/VASP-like protein protein-coding 625911909 Ifi30 IFI30 lysosomal thiol reductase ENCODES a protein that exhibits oxidoreductase activity, acting on a sulfur group of donors (ortholog); oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor (ortholog); INVOLVED IN antigen processing and presentation of exogenous peptide antigen via MHC class I (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); negative regulation of fibroblast proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic contact dermatitis (ortholog); metabolic dysfunction-associated steatotic liver disease (ortholog); FOUND IN lysosome (ortholog) 13 13003673 13008154 - 22301074;30032202 116914810 MODEL JAAIVD010000008;XM_032919265 XP_032775156 gamma-interferon-inducible lysosomal thiol reductase protein-coding 625911920 LOC116897385 U6 spliceosomal RNA 3 64831510 64831616 - 116897385 MODEL JAAIVD010000012;XR_004387429 snrna 625911923 Col28a1 collagen type XXVIII alpha 1 chain ASSOCIATED WITH amphetamine abuse (ortholog); FOUND IN basement membrane (ortholog) 6 130217668 130367536 + 22301074 116904083 MODEL JAAIVD010000024;XM_032906950 XP_032762841 collagen alpha-1(XXVIII) chain protein-coding 625911962 LOC116913928 uncharacterized LOC116913928 12 33454390 33458665 - 116913928 MODEL JAAIVD010000007;XM_032918195 XP_032774086 uncharacterized protein LOC116913928 protein-coding 625911969 Kcnip2 potassium voltage-gated channel interacting protein 2 ENCODES a protein that exhibits A-type (transient outward) potassium channel activity (ortholog); calcium ion binding (ortholog); identical protein binding (ortholog); INVOLVED IN action potential (ortholog); clustering of voltage-gated potassium channels (ortholog); membrane repolarization (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH Cardiac Arrhythmias (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); plasma membrane (ortholog) 2 45267753 45290482 - 22301074;30032202 116891232 MODEL JAAIVD010000001;XM_032892082;XM_032892083;XM_032892084;XM_032892085 XP_032747973;XP_032747974;XP_032747975;XP_032747976 Kv channel-interacting protein 2 protein-coding 625911991 Otulin OTU deubiquitinase with linear linkage specificity ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); cysteine-type peptidase activity (ortholog); INVOLVED IN innate immune response (ortholog); negative regulation of inflammatory response (ortholog); nucleotide-binding oligomerization domain containing 2 signaling pathway (ortholog); ASSOCIATED WITH autosomal dominant autoinflammation, panniculitis, and dermatosis syndrome (ortholog); autosomal recessive autoinflammation, panniculitis, and dermatosis syndrome (ortholog); immunodeficiency 107 (ortholog); FOUND IN cytoplasm (ortholog); LUBAC complex (ortholog) 3 153216483 153241497 + 22301074 116897060 MODEL JAAIVD010000012;XM_032898683;XM_032898684;XM_032898685 XP_032754574;XP_032754575;XP_032754576 ubiquitin thioesterase otulin protein-coding 625912010 LOC116886739 small nucleolar RNA SNORA17 17 9965212 9965340 - 116886739 MODEL JAAIVD010000011;XR_004386147 snorna 625912013 Bbs9 Bardet-Biedl syndrome 9 INVOLVED IN cilium assembly (ortholog); fat cell differentiation (ortholog); protein localization to cilium (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl syndrome 9 (ortholog); FOUND IN BBSome (ortholog); centriolar satellite (ortholog); ciliary membrane (ortholog) 8 18698588 19103712 + 30032202 116906698 MODEL JAAIVD010000027;XM_032909494 XP_032765385 protein PTHB1 protein-coding 625912041 LOC116888422 protein phosphatase inhibitor 2 family member C-like X 7916683 7917231 - 22301074;30032202 116888422 MODEL JAAIVD010000014;XM_032889691 XP_032745582 protein-coding 625912044 Ptprz1 protein tyrosine phosphatase receptor type Z1 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); integrin binding (ortholog); phosphatase activity (ortholog); INVOLVED IN axonal fasciculation (ortholog); axonogenesis (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Brain Hypoxia-Ischemia (ortholog); Brain Injuries (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); dendritic spine (ortholog) 6 116161663 116343087 - 22301074;30032202 116904043 MODEL JAAIVD010000024;XM_032906900 XP_032762791 receptor-type tyrosine-protein phosphatase zeta protein-coding 625912078 LOC116899983 60S ribosomal protein L34-like 5 136521376 136521995 - 116899983 MODEL JAAIVD010000023 pseudo 625912079 LOC116913319 protein S100-A10-like 12 6965909 6966247 + 116913319 MODEL JAAIVD010000007 pseudo 625912080 LOC116911495 olfactory receptor 10J3-like 10 52250379 52251320 + 22301074 116911495 MODEL JAAIVD010000005;XM_032915479 XP_032771370 protein-coding 625912083 Actg1 actin gamma 1 ENCODES a protein that exhibits identical protein binding (ortholog); profilin binding (ortholog); structural constituent of cytoskeleton (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to type II interferon (ortholog); morphogenesis of a polarized epithelium (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Animal Mammary Neoplasms (ortholog); autosomal dominant nonsyndromic deafness 20 (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); apical junction complex (ortholog) 9 63672093 63674984 + 2402472 116908743 MODEL JAAIVD010000002;X52815;XM_032912092 CAA36999;XP_032767983 actin, cytoplasmic 2 protein-coding 625912093 LOC116894111 uncharacterized protein RAB5IF homolog 1 20182415 20183280 - 116894111 MODEL JAAIVD010000025 pseudo 625912094 LOC116912964 small nucleolar RNA SNORA18 11 3996269 3996399 + 116912964 MODEL JAAIVD010000006;XR_004389531 snorna 625912097 LOC116906886 cytochrome P450 4F5 1 157047990 157064287 + 22301074 116906886 MODEL JAAIVD010000025;XM_032909803 XP_032765694 protein-coding 625912113 LOC116905796 translationally-controlled tumor protein-like 7 9535335 9536953 - 116905796 MODEL JAAIVD010000026 pseudo 625912114 LOC116900825 40S ribosomal protein S7-like 5 44614999 44615526 + 116900825 MODEL JAAIVD010000023 pseudo 625912115 LOC116908388 small nucleolar RNA SNORA48 8 70429503 70429647 + 116908388 MODEL JAAIVD010000027;XR_004388933 snorna 625912118 LOC116902667 U6 spliceosomal RNA 5 64300914 64301020 - 116902667 MODEL JAAIVD010000023;XR_004388229 snrna 625912121 LOC116902479 U6 spliceosomal RNA 5 34989341 34989437 - 116902479 MODEL JAAIVD010000023 pseudo 625912122 Fam186b family with sequence similarity 186 member B ASSOCIATED WITH nephronophthisis (ortholog); FOUND IN protein-containing complex (ortholog) 1 272075882 272091371 - 116885011 MODEL JAAIVD010000025;XM_032886254 XP_032742145 protein FAM186B protein-coding 625912134 LOC116895946 60S ribosomal protein L30-like 3 135774523 135774864 + 22301074;30032202 116895946 MODEL JAAIVD010000012;XM_032897006 XP_032752897 protein-coding 625912137 Slc25a23 solute carrier family 25 member 23 ENCODES a protein that exhibits adenine nucleotide transmembrane transporter activity (ortholog); ADP:phosphate antiporter activity (ortholog); ATP:phosphate antiporter activity (ortholog); INVOLVED IN adenine nucleotide transport (ortholog); calcium import into the mitochondrion (ortholog); cellular response to calcium ion (ortholog); FOUND IN mitochondrion (ortholog) 4 88422475 88438543 - 22301074;30032202 116899209 MODEL JAAIVD010000003;XM_032900800;XM_032900801 XP_032756691;XP_032756692 calcium-binding mitochondrial carrier protein SCaMC-3 protein-coding 625912154 Hoxd12 homeobox D12 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN embryonic digit morphogenesis (ortholog); pattern specification process (ortholog); skeletal system development (ortholog); ASSOCIATED WITH clubfoot (ortholog); Congenital Limb Deformities (ortholog); melanoma (ortholog); FOUND IN transcription regulator complex (ortholog) 5 52016460 52017582 + 22301074;30032202 116900208 MODEL JAAIVD010000023;XM_032901963 XP_032757854 homeobox protein Hox-D12 protein-coding 625912160 LOC116892852 uncharacterized LOC116892852 2 192682855 192709870 - 116892852 MODEL JAAIVD010000001;XR_004386978 ncrna 625912164 LOC116894294 mortality factor 4-like protein 1 2 137477535 137478496 + 116894294 MODEL JAAIVD010000001 pseudo 625912165 Ryr1 ryanodine receptor 1 ENCODES a protein that exhibits calcium channel activity (ortholog); calcium-induced calcium release activity (ortholog); enzyme binding (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); cellular response to ATP (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH anterior segment dysgenesis (ortholog); anterior segment dysgenesis 7 (ortholog); arthrogryposis multiplex congenita (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) 2 166870656 166999047 + 22301074;30032202 116892364 MODEL JAAIVD010000001;XM_032894022 XP_032749913 protein-coding 625912274 Rabep1 rabaptin, RAB GTPase binding effector protein 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN Golgi to plasma membrane transport (ortholog); protein localization to ciliary membrane (ortholog); regulation of postsynaptic neurotransmitter receptor internalization (ortholog); ASSOCIATED WITH teratoma (ortholog); FOUND IN cytosol (ortholog); endocytic vesicle (ortholog); endosome (ortholog) 9 50466718 50569706 + 22301074;30032202 116909023 MODEL JAAIVD010000002;XM_032912499;XM_032912500;XM_032912501;XM_032912502 XP_032768390;XP_032768391;XP_032768392;XP_032768393 rab GTPase-binding effector protein 1 protein-coding 625912303 LOC116902506 small nucleolar RNA SNORD36 5 9742305 9742378 - 116902506 MODEL JAAIVD010000023;XR_004388116 snorna 625912306 LOC116883724 constitutive coactivator of PPAR-gamma-like protein 1 14 67865101 67953915 - 30032202 116883724 MODEL JAAIVD010000009;XM_032884954 XP_032740845 protein-coding 625912328 LOC116900916 actin-related protein 2/3 complex subunit 5-like 5 78786637 78787067 + 116900916 MODEL JAAIVD010000023 pseudo 625912329 LOC116893510 actin, alpha skeletal muscle-like 2 188290919 188295075 + 116893510 MODEL JAAIVD010000001;XM_032895245 XP_032751136 protein-coding 625912333 Slc17a9 solute carrier family 17 member 9 ENCODES a protein that exhibits ADP transmembrane transporter activity (ortholog); ATP transmembrane transporter activity (ortholog); guanine nucleotide transmembrane transporter activity (ortholog); INVOLVED IN ADP transport (ortholog); ATP export (ortholog); ATP transport (ortholog); ASSOCIATED WITH porokeratosis (ortholog); Porokeratosis, Disseminated Superficial Actinic, 8 (ortholog); FOUND IN chromaffin granule membrane (ortholog); lysosomal membrane (ortholog); mucin granule (ortholog) 5 157825346 157841673 + 22301074 116902421 MODEL JAAIVD010000023;XM_032904950;XM_032904951;XM_032904952 XP_032760841;XP_032760842;XP_032760843 protein-coding 625912356 LOC116912960 small nucleolar RNA SNORA19 11 94882205 94882330 - 116912960 MODEL JAAIVD010000006;XR_004389527 snorna 625912359 LOC116907814 uncharacterized LOC116907814 8 39413326 39414347 + 116907814 MODEL JAAIVD010000027;XR_004388848 ncrna 625912364 Nlrp5 NLR family pyrin domain containing 5 ENCODES a protein that exhibits structural constituent of cytoplasmic lattice (ortholog); tubulin binding (ortholog); INVOLVED IN actin filament organization (ortholog); animal organ morphogenesis (ortholog); cortical granule exocytosis (ortholog); ASSOCIATED WITH Embryo Loss (ortholog); oculoectodermal syndrome (ortholog); Oocyte/Zygote/Embryo Maturation Arrest 19 (ortholog); FOUND IN apical cortex (ortholog); cell cortex (ortholog); cortical granule (ortholog) 2 180006023 180030396 - 22301074;30032202 116894575 MODEL JAAIVD010000001;XM_032896294 XP_032752185 NACHT, LRR and PYD domains-containing protein 5 protein-coding 625912374 LOC116904576 60S ribosomal protein L26-like 6 20473144 20473572 + 116904576 MODEL JAAIVD010000024 pseudo 625912375 LOC116894892 U6 spliceosomal RNA 2 80778228 80778330 + 116894892 MODEL JAAIVD010000001;XR_004387098 snrna 625912378 Znf574 zinc finger protein 574 ENCODES a protein that exhibits ribosomal large subunit binding (ortholog); INVOLVED IN cytosolic ribosome assembly (ortholog); regulation of ribosome biogenesis (ortholog); ribosome-associated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 2 169624144 169630041 - 30032202 116892471 MODEL JAAIVD010000001;XM_032894195;XM_032894196 XP_032750086;XP_032750087 protein-coding 625912387 Pacsin3 protein kinase C and casein kinase substrate in neurons 3 ENCODES a protein that exhibits calcium channel inhibitor activity (ortholog); cytoskeletal protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of calcium ion transport (ortholog); negative regulation of endocytosis (ortholog); plasma membrane tubulation (ortholog); ASSOCIATED WITH congenital myopathy 27 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 5 65418440 65426351 + 22301074;30032202 116901617 MODEL JAAIVD010000023;XM_032903663;XM_032903664 XP_032759554;XP_032759555 protein kinase C and casein kinase substrate in neurons protein 3 protein-coding 625912404 LOC116898307 eukaryotic initiation factor 4A-I-like 4 32635292 32635942 + 116898307 MODEL JAAIVD010000003 pseudo 625912405 LOC116892763 olfactory receptor 1030-like 2 182701514 182702449 - 22301074;30032202 116892763 MODEL JAAIVD010000001;XM_032894642 XP_032750533 protein-coding 625912408 Mex3c mex-3 RNA binding family member C ENCODES a protein that exhibits RNA binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN chondrocyte hypertrophy (ortholog); energy homeostasis (ortholog); regulation of fat cell differentiation (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); systemic juvenile rheumatoid arthritis (ortholog) 15 58484676 58510450 - 22301074;30032202 116884394 MODEL JAAIVD010000010;XM_032885501 XP_032741392 RNA-binding E3 ubiquitin-protein ligase MEX3C protein-coding 625912416 Cbr4 carbonyl reductase 4 ENCODES a protein that exhibits 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity (ortholog); NAD(P)H dehydrogenase (quinone) activity (ortholog); NADPH binding (ortholog); INVOLVED IN daunorubicin metabolic process (ortholog); doxorubicin metabolic process (ortholog); fatty acid biosynthetic process (ortholog); ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); pancreatic cancer (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); oxidoreductase complex (ortholog) 13 27541551 27557239 - 30032202 116914723 MODEL JAAIVD010000008;XM_032919153 XP_032775044 carbonyl reductase family member 4 protein-coding 625912425 LOC116910589 uncharacterized LOC116910589 9 82744284 82759322 - 116910589 MODEL JAAIVD010000002;XR_004389161;XR_004389162;XR_004389163 ncrna 625912435 LOC116906873 olfactory receptor 145-like 8 32258992 32259924 + 22301074;30032202 116906873 MODEL JAAIVD010000027;XM_032909785 XP_032765676 protein-coding 625912438 LOC116900819 60S ribosomal protein L9-like 5 39552869 39562793 - 116900819 MODEL JAAIVD010000023 pseudo 625912439 LOC116897734 60S ribosomal protein L10a-like 4 100971336 100975434 - 116897734 MODEL JAAIVD010000003 pseudo 625912440 Aadacl3 arylacetamide deacetylase like 3 1 14360930 14368971 + 22301074 116886256 MODEL JAAIVD010000025;XM_032887680 XP_032743571 arylacetamide deacetylase-like 3 protein-coding 625912446 LOC116912769 eukaryotic translation initiation factor 6-like 11 75644824 75645595 - 116912769 MODEL JAAIVD010000006 pseudo 625912447 LOC116904187 macrophage migration inhibitory factor-like 6 152356715 152357755 + 30032202 116904187 MODEL JAAIVD010000024;XM_032907097 XP_032762988 protein-coding 625912451 LOC116891111 60S ribosomal protein L36a-like 2 34295258 34295643 - 116891111 MODEL JAAIVD010000001 pseudo 625912452 Rbm48 RNA binding motif protein 48 ASSOCIATED WITH nephronophthisis (ortholog); FOUND IN nucleoplasm (ortholog) 6 135860825 135872471 - 22301074;30032202 116904114 MODEL JAAIVD010000024;XM_032906994;XM_032906995 XP_032762885;XP_032762886 RNA-binding protein 48 protein-coding 625912464 LOC116893985 olfactory receptor 52B6 2 101454569 101455892 - 22301074 116893985 MODEL JAAIVD010000001;XM_032895700 XP_032751591 protein-coding 625912468 LOC116908234 transcriptional adapter 3-like 8 83450575 83451898 - 116908234 MODEL JAAIVD010000027 pseudo 625912469 Xpnpep2 X-prolyl aminopeptidase 2 PARTICIPATES IN kallikrein-kinin cascade pathway; ASSOCIATED WITH acquired angioedema (ortholog); angioedema (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN extracellular exosome (ortholog) X 110272077 110298450 - 22301074 116889187 MODEL JAAIVD010000014;XM_032890348 XP_032746239 xaa-Pro aminopeptidase 2 protein-coding 625912494 Ky kyphoscoliosis peptidase INVOLVED IN muscle organ development (ortholog); neuromuscular junction development (ortholog); ASSOCIATED WITH COVID-19 (ortholog); myofibrillar myopathy (ortholog); myofibrillar myopathy 7 (ortholog); FOUND IN Z disc (ortholog) 8 93806512 93845344 + 116907970 MODEL JAAIVD010000027;XM_032911198;XM_032911199;XM_032911200;XM_032911201 XP_032767089;XP_032767090;XP_032767091;XP_032767092 protein-coding 625912519 Nipal2 NIPA like domain containing 2 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 1 208256305 208348612 - 22301074;30032202 116884204 MODEL JAAIVD010000025;XM_032885334 XP_032741225 NIPA-like protein 2 protein-coding 625912533 Pip4p1 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1 ENCODES a protein that exhibits phosphatidylinositol-4,5-bisphosphate 4-phosphatase activity (ortholog); INVOLVED IN cholesterol metabolic process (ortholog); lysosome localization (ortholog); phosphatidylinositol dephosphorylation (ortholog); FOUND IN late endosome membrane (ortholog); lysosomal membrane (ortholog); phagocytic vesicle membrane (ortholog) 12 72384716 72388327 + 22301074;30032202 116913379 MODEL JAAIVD010000007;XM_032917550;XM_032917551;XM_032917552;XM_032917553 XP_032773441;XP_032773442;XP_032773443;XP_032773444 type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase protein-coding 625912552 Abca12 ATP binding cassette subfamily A member 12 ENCODES a protein that exhibits apolipoprotein A-I receptor binding (ortholog); lipid carrier activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN ceramide metabolic process (ortholog); ceramide transport (ortholog); corneocyte desquamation (ortholog); ASSOCIATED WITH autosomal recessive congenital ichthyosis (ortholog); autosomal recessive congenital ichthyosis 1 (ortholog); autosomal recessive congenital ichthyosis 4A (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); epidermal lamellar body (ortholog) 4 144799599 144969438 - 22301074;30032202 116899475 MODEL JAAIVD010000003;XM_032901300 XP_032757191 ATP-binding cassette sub-family A member 12 protein-coding 625912609 LOC116912927 U6 spliceosomal RNA 11 20110794 20110901 + 116912927 MODEL JAAIVD010000006;XR_004389498 snrna 625912612 LOC116892077 uncharacterized LOC116892077 2 151214849 151217380 - 116892077 MODEL JAAIVD010000001;XR_004386908 ncrna 625912616 LOC116906390 small nucleolar RNA SNORD113/SNORD114 family 7 127201020 127201093 + 116906390 MODEL JAAIVD010000026;XR_004388660 snorna 625912619 Ifnar2 interferon alpha and beta receptor subunit 2 ENCODES a protein that exhibits cytokine binding (ortholog); protein kinase binding (ortholog); type I interferon binding (ortholog); INVOLVED IN cell population proliferation (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); cellular response to interferon-beta (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatitis B (ortholog); immunodeficiency 45 (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) 4 53201836 53221781 - 22301074;30032202 116898996 MODEL JAAIVD010000003;XM_032900442 XP_032756333 interferon alpha/beta receptor 2 protein-coding 625912632 LOC116888589 rho GTPase-activating protein 6-like X 28750700 28814862 + 116888589 MODEL JAAIVD010000014 pseudo 625912633 LOC116895053 small nucleolar RNA SNORA17 2 38065897 38066022 + 116895053 MODEL JAAIVD010000001;XR_004387235 snorna 625912636 Dennd1c DENN domain containing 1C ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway 4 88444308 88457031 - 30032202 116899212 MODEL JAAIVD010000003;XM_032900806 XP_032756697 DENN domain-containing protein 1C protein-coding 625912664 LOC116905405 WD repeat-containing protein 60-like 7 119819649 119848959 + 30032202 116905405 MODEL JAAIVD010000026;XM_032908363;XM_032908365;XM_032908366;XM_032908367;XM_032908368 XP_032764254;XP_032764256;XP_032764257;XP_032764258;XP_032764259 protein-coding 625912688 LOC116912269 alpha-fetoprotein-like 11 3991887 4033200 + 22301074;30032202 116912269 MODEL JAAIVD010000006;XM_032916257 XP_032772148 protein-coding 625912706 Pth2r parathyroid hormone 2 receptor ENCODES a protein that exhibits parathyroid hormone receptor activity (ortholog); INVOLVED IN positive regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH syndromic intellectual disability (ortholog) 4 139198948 139297161 + 22301074;30032202 116899464 MODEL JAAIVD010000003;XM_032901262 XP_032757153 protein-coding 625912723 Kdm2a lysine demethylase 2A ENCODES a protein that exhibits histone H3K36 demethylase activity (ortholog); unmethylated CpG binding (ortholog); zinc ion binding (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); double-strand break repair via nonhomologous end joining (ortholog); heart looping (ortholog); PARTICIPATES IN DNA modification pathway; histone modification pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); congestive heart failure (ortholog); Familial Prostate Cancer (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog) 2 3259066 3328896 + 22301074;30032202 116894781 MODEL JAAIVD010000001;XM_032896433 XP_032752324 lysine-specific demethylase 2A protein-coding 625912749 Otud6a OTU deubiquitinase 6A ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); INVOLVED IN protein K11-linked deubiquitination (ortholog); protein K27-linked deubiquitination (ortholog); protein K29-linked deubiquitination (ortholog) X 58182483 58183355 + 30032202 116888576 MODEL JAAIVD010000014;XM_032889877 XP_032745768 OTU domain-containing protein 6A protein-coding 625912752 LOC116895929 glutathione peroxidase 2-like 3 124974400 124974975 + 116895929 MODEL JAAIVD010000012 pseudo 625912753 Crppa CDP-L-ribitol pyrophosphorylase A ENCODES a protein that exhibits cytidylyltransferase activity (ortholog); D-ribitol-5-phosphate cytidylyltransferase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN axon guidance (ortholog); glycoprotein biosynthetic process (ortholog); protein O-linked glycosylation via mannose (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2U (ortholog); congenital muscular dystrophy (ortholog); congenital muscular dystrophy due to integrin alpha-7 deficiency (ortholog); FOUND IN cytosol (ortholog) 7 49925492 50182940 - 22301074;30032202 116904979 MODEL JAAIVD010000026;XM_032907659 XP_032763550 D-ribitol-5-phosphate cytidylyltransferase protein-coding 625912767 LOC116894584 T-complex protein 1 subunit zeta-like 2 180397918 180399586 - 116894584 MODEL JAAIVD010000001 pseudo 625912768 Myo5c myosin VC ASSOCIATED WITH substance-related disorder (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 8 69521287 69598611 + 22301074;30032202 116906837 MODEL JAAIVD010000027;XM_032909725 XP_032765616 unconventional myosin-Vc protein-coding 625912813 Ophn1 oligophrenin 1 ENCODES a protein that exhibits actin binding (ortholog); GTPase activator activity (ortholog); ionotropic glutamate receptor binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell junction assembly (ortholog); cell morphogenesis involved in neuron differentiation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Billuart-type X-linked syndromic intellectual developmental disorder (ortholog); cerebellar hypoplasia (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); dendrite (ortholog) X 56552350 56808944 + 22301074;30032202 116887802 MODEL JAAIVD010000014;XM_032889327;XM_032889328 XP_032745218;XP_032745219 oligophrenin-1 protein-coding 625912838 Chmp7 charged multivesicular body protein 7 INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); exit from mitosis (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); chromatin (ortholog) 12 54601156 54616448 + 30032202 116914075 MODEL JAAIVD010000007;XM_032918382 XP_032774273 protein-coding 625912852 LOC116889808 30S ribosomal protein S10-like 22301074;30032202 116889808 MODEL JAAIVD010000764;XM_032890655 XP_032746546 protein-coding 625912853 LOC116887222 butyrophilin-like protein 1 18 7078858 7088235 + 30032202 116887222 MODEL JAAIVD010000013;XM_032888783;XM_032888784;XM_032888785 XP_032744674;XP_032744675;XP_032744676 protein-coding 625912877 LOC116897165 histone H2A.Z-like 1 87407893 87408215 - 116897165 MODEL JAAIVD010000025 pseudo 625912878 Trnam-cau transfer RNA methionine (anticodon CAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889664 MODEL JAAIVD010000045 trna 625912879 Gsc2 goosecoid homeobox 2 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleus (ortholog) 4 3178101 3180087 - 22301074;30032202 116897779 MODEL JAAIVD010000003;XM_032899205 XP_032755096 homeobox protein goosecoid-2 protein-coding 625912885 Ptafr platelet activating factor receptor ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); lipopolysaccharide immune receptor activity (ortholog); mitogen-activated protein kinase binding (ortholog); INVOLVED IN cellular response to 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine (ortholog); cellular response to cAMP (ortholog); cellular response to fatty acid (ortholog); ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); acute kidney failure (ortholog); Acute Liver Failure (ortholog); FOUND IN plasma membrane (ortholog) 1 25656122 25681512 - 22301074;30032202 116895438 MODEL JAAIVD010000025;XM_032896718;XM_032896724 XP_032752609;XP_032752615 platelet-activating factor receptor protein-coding 625912894 Fam13a family with sequence similarity 13 member A ASSOCIATED WITH chronic obstructive pulmonary disease (ortholog); COVID-19 (ortholog); idiopathic pulmonary fibrosis (ortholog) 6 82912226 82969162 + 116904363 MODEL JAAIVD010000024;XM_032907245 XP_032763136 protein FAM13A protein-coding 625912914 Slc3a2 solute carrier family 3 member 2 ENCODES a protein that exhibits aromatic amino acid transmembrane transporter activity (ortholog); double-stranded RNA binding (ortholog); exogenous protein binding (ortholog); INVOLVED IN amino acid import across plasma membrane (ortholog); cellular response to glucose starvation (ortholog); isoleucine transport (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); autism spectrum disorder (ortholog); Liver Metastasis (ortholog); FOUND IN amino acid transport complex (ortholog); apical plasma membrane (ortholog); apical pole of neuron (ortholog) 2 9217890 9232052 + 22301074;30032202 116890938 MODEL JAAIVD010000001;XM_032891580 XP_032747471 4F2 cell-surface antigen heavy chain protein-coding 625912928 Stard6 StAR related lipid transfer domain containing 6 15 60775361 60792381 - 22301074;30032202 116884395 MODEL JAAIVD010000010;XM_032885503 XP_032741394 stAR-related lipid transfer protein 6 protein-coding 625912940 LOC116905566 geranylgeranyl transferase type-2 subunit beta-like 7 87464324 87469519 + 116905566 MODEL JAAIVD010000026 pseudo 625912941 LOC116911403 uncharacterized LOC116911403 10 2078754 2097213 - 116911403 MODEL JAAIVD010000005 pseudo 625912942 Sgpl1 sphingosine-1-phosphate lyase 1 ENCODES a protein that exhibits sphinganine-1-phosphate aldolase activity (ortholog); INVOLVED IN androgen metabolic process (ortholog); apoptotic signaling pathway (ortholog); ceramide metabolic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH genetic disease (ortholog); nephrotic syndrome (ortholog); RENI syndrome (ortholog); FOUND IN endoplasmic reticulum (ortholog) 18 26934031 26980027 - 22301074;30032202 116886810 MODEL JAAIVD010000013;XM_032888237;XM_032888238;XM_032888239 XP_032744128;XP_032744129;XP_032744130 protein-coding 625912966 Mcc MCC regulator of WNT signaling pathway INVOLVED IN establishment of protein localization (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of epithelial cell migration (ortholog); ASSOCIATED WITH autistic disorder (ortholog); colon carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 2 229762556 229802275 + 22301074 116893046 MODEL JAAIVD010000001;XM_032895014 XP_032750905 colorectal mutant cancer protein protein-coding 625912972 Rgs1 regulator of G protein signaling 1 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); leukotriene signaling pathway (ortholog); positive regulation of GTPase activity (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); Arsenic Poisoning (ortholog); COVID-19 (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) 10 24151464 24155812 - 116911682 MODEL JAAIVD010000005;XM_032915635 XP_032771526 regulator of G-protein signaling 1 protein-coding 625912981 Arhgef2 Rho/Rac guanine nucleotide exchange factor 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); microtubule binding (ortholog); small GTPase binding (ortholog); INVOLVED IN actin filament organization (ortholog); asymmetric neuroblast division (ortholog); cell morphogenesis (ortholog); PARTICIPATES IN Reelin signaling pathway; ASSOCIATED WITH microcephaly (ortholog); myoepithelioma (ortholog); neurodevelopmental disorder with midbrain and hindbrain malformations (ortholog); FOUND IN cytoplasm (ortholog); cytoskeleton (ortholog); dendritic shaft (ortholog) 3 64902011 64945270 - 22301074;30032202 116896678 MODEL JAAIVD010000012;XM_032898052;XM_032898053;XM_032898054;XM_032898055;XM_032898056;XM_032898057;XM_032898058;XM_032898059 XP_032753943;XP_032753944;XP_032753945;XP_032753946;XP_032753947;XP_032753948;XP_032753949;XP_032753950 rho guanine nucleotide exchange factor 2 protein-coding 625913031 Col24a1 collagen type XXIV alpha 1 chain INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH genetic disease (ortholog); prostate cancer (ortholog) 3 15325482 15581002 - 22301074 116896182 MODEL JAAIVD010000012;XM_032897221 XP_032753112 collagen alpha-1(XXIV) chain protein-coding 625913095 Rnft1 ring finger protein, transmembrane 1 ENCODES a protein that exhibits ubiquitin binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN positive regulation of ERAD pathway (ortholog); protein autoubiquitination (ortholog); FOUND IN endoplasmic reticulum (ortholog) 9 84275585 84286686 - 30032202 116909185 MODEL JAAIVD010000002;XM_032912676 XP_032768567 E3 ubiquitin-protein ligase RNFT1 protein-coding 625913108 LOC116894848 U6 spliceosomal RNA 2 28887840 28887946 - 116894848 MODEL JAAIVD010000001;XR_004387063 snrna 625913111 Hoxc4 homeobox C4 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); HMG box domain binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); cartilage development (ortholog); cellular response to glial cell derived neurotrophic factor (ortholog); ASSOCIATED WITH esophageal atresia (ortholog); FOUND IN nucleoplasm (ortholog) 1 260046588 260049121 - 22301074;30032202 116883297 MODEL JAAIVD010000025;XM_032884311 XP_032740202 homeobox protein Hox-C4 protein-coding 625913117 Triml2 tripartite motif family like 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN response to retinoic acid (ortholog) 13 44597328 44607949 + 22301074 116914868 MODEL JAAIVD010000008;XM_032919314 XP_032775205 probable E3 ubiquitin-protein ligase TRIML2 protein-coding 625913126 Pdlim3 PDZ and LIM domain 3 ENCODES a protein that exhibits actinin binding (ortholog); cytoskeletal protein binding (ortholog); structural constituent of muscle (ortholog); INVOLVED IN actin filament organization (ortholog); heart development (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); cardiomyopathy (ortholog); dilated cardiomyopathy (ortholog); FOUND IN actin cytoskeleton (ortholog); cytosol (ortholog); Z disc (ortholog) 13 41971215 42002477 - 30032202 116914799 MODEL JAAIVD010000008;XM_032919249;XM_032919250 XP_032775140;XP_032775141 PDZ and LIM domain protein 3 protein-coding 625913140 Atp1b2 ATPase Na+/K+ transporting subunit beta 2 ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); P-type sodium:potassium-exchanging transporter activity (ortholog); INVOLVED IN cell-substrate adhesion (ortholog); intracellular potassium ion homeostasis (ortholog); intracellular sodium ion homeostasis (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); cerebellar ataxia (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); astrocyte end-foot (ortholog); astrocyte projection (ortholog) 9 49208873 49215290 - 22301074;30032202 116909577 MODEL JAAIVD010000002;XM_032913197 XP_032769088 sodium/potassium-transporting ATPase subunit beta-2 protein-coding 625913151 Kcnc1 potassium voltage-gated channel subfamily C member 1 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); kinesin binding (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN cellular response to xenobiotic stimulus (ortholog); cerebellum development (ortholog); corpus callosum development (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN axolemma (ortholog); calyx of Held (ortholog); cell surface (ortholog) 2 152934126 153100996 - 1378392;22301074;30032202 116892105 MODEL JAAIVD010000001;X62840;XM_032893582;XR_004386912 CAA44644;XP_032749473 voltage-gated potassium channel protein-coding 625913163 Stx5 syntaxin 5 ENCODES a protein that exhibits SNAP receptor activity (ortholog); INVOLVED IN early endosome to Golgi transport (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); Golgi disassembly (ortholog); ASSOCIATED WITH Congenital Disorder of Glycosylation Type IIaa (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); SNARE complex (ortholog) 2 9187538 9202838 - 22301074;30032202 116890931 MODEL JAAIVD010000001;XM_032891574;XM_032891575 XP_032747465;XP_032747466 syntaxin-5 protein-coding 625913181 LOC116908043 zinc finger protein 120-like 8 115252500 115263047 + 22301074 116908043 MODEL JAAIVD010000027;XM_032911317 XP_032767208 protein-coding 625913188 LOC116885736 NXPE family member 3-like 16 16054136 16069875 - 116885736 MODEL JAAIVD010000004;XM_032887046 XP_032742937 protein-coding 625913197 Fnbp4 formin binding protein 4 FOUND IN nucleoplasm (ortholog) 5 64925342 64954209 + 22301074 116901597 MODEL JAAIVD010000023;XM_032903623 XP_032759514 formin-binding protein 4 protein-coding 625913218 LOC116908929 keratin-associated protein 2-1-like 9 54454814 54455212 - 116908929 MODEL JAAIVD010000002 pseudo 625913219 LOC116908741 uncharacterized LOC116908741 9 32450424 32452199 + 116908741 MODEL JAAIVD010000002;XR_004389017 ncrna 625913224 LOC116893570 histocompatibility antigen 60b-like 2 221874882 222066470 - 30032202 116893570 MODEL JAAIVD010000001;XM_032895277 XP_032751168 protein-coding 625913231 LOC116897499 small nucleolar RNA SNORA15 3 194420783 194420912 + 116897499 MODEL JAAIVD010000012;XR_004387520 snorna 625913234 Fis1 fission, mitochondrial 1 ENCODES a protein that exhibits identical protein binding (ortholog); lipid binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cellular response to lipid (ortholog); cellular response to peptide (ortholog); PARTICIPATES IN mitochondria fission pathway; ASSOCIATED WITH acute kidney failure (ortholog); Alzheimer's disease (ortholog); chronic kidney disease (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog); peroxisomal membrane (ortholog) 16 17053579 17068682 - 22301074;30032202 116885319 MODEL JAAIVD010000004;XM_032886581;XM_032886582;XM_032886583;XM_032886584 XP_032742472;XP_032742473;XP_032742474;XP_032742475 mitochondrial fission 1 protein protein-coding 625913254 Map3k12 mitogen-activated protein kinase kinase kinase 12 ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); protein kinase binding (ortholog); INVOLVED IN JNK cascade (ortholog); negative regulation of motor neuron apoptotic process (ortholog); peptidyl-serine phosphorylation (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; FOUND IN axon (ortholog); cytosol (ortholog); growth cone (ortholog) 1 260565470 260584247 + 22301074;30032202 116883361 MODEL JAAIVD010000025;XM_032884443;XM_032884453;XM_032884464;XM_032884475;XM_032884484 XP_032740334;XP_032740344;XP_032740355;XP_032740366;XP_032740375 protein-coding 625913284 LOC116913884 26S proteasome non-ATPase regulatory subunit 8-like 12 17406258 17407885 - 116913884 MODEL JAAIVD010000007 pseudo 625913285 LOC116908436 U1 spliceosomal RNA 8 36376267 36376418 - 116908436 MODEL JAAIVD010000027 pseudo 625913286 LOC116893423 zinc finger and SCAN domain containing protein 4D-like 2 175065026 175068887 - 30032202 116893423 MODEL JAAIVD010000001;XM_032895201 XP_032751092 protein-coding 625913292 LOC116907182 elongation factor 1-alpha 1-like 8 1342670 1347104 - 116907182 MODEL JAAIVD010000027 pseudo 625913293 LOC116887950 heterogeneous nuclear ribonucleoprotein A1-like X 63686932 63687711 - 116887950 MODEL JAAIVD010000014 pseudo 625913294 Bag3 BAG cochaperone 3 ENCODES a protein that exhibits adenyl-nucleotide exchange factor activity (ortholog); protein-containing complex binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); cellular response to heat (ortholog); cellular response to mechanical stimulus (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); asphyxiating thoracic dystrophy 3 (ortholog); atrial fibrillation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 2 73395151 73419277 - 22301074;30032202 116891432 MODEL JAAIVD010000001;XM_032892487 XP_032748378 BAG family molecular chaperone regulator 3 protein-coding 625913302 LOC116892688 zinc finger protein 580 2 177630115 177632286 + 30032202 116892688 MODEL JAAIVD010000001;XM_032894544 XP_032750435 protein-coding 625913308 LOC116887485 H-2 class I histocompatibility antigen, D-37 alpha chain-like 18 9223888 9260418 - 30032202 116887485 MODEL JAAIVD010000013;XM_032889106;XM_032889107;XM_032889108;XM_032889109 XP_032744997;XP_032744998;XP_032744999;XP_032745000 protein-coding 625913329 Rad9b RAD9 checkpoint clamp component B ASSOCIATED WITH neural tube defect (ortholog); FOUND IN nucleus (ortholog) 16 31494904 31524365 + 22301074;30032202 116885809 MODEL JAAIVD010000004;XM_032887142 XP_032743033 cell cycle checkpoint control protein RAD9B protein-coding 625913344 Dennd3 DENN domain containing 3 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN endosome to lysosome transport (ortholog); protein catabolic process (ortholog); ASSOCIATED WITH Hirschsprung's disease (ortholog) 1 246270696 246329489 + 22301074;30032202 116912442 MODEL JAAIVD010000025;XM_032916514 XP_032772405 DENN domain-containing protein 3 protein-coding 625913371 Tgif2 TGFB induced factor homeobox 2 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); nodal signaling pathway (ortholog); positive regulation of neuron differentiation (ortholog); FOUND IN nucleoplasm (ortholog) 5 136172919 136184141 + 30032202 116902210 MODEL JAAIVD010000023;XM_032904607;XM_032904609 XP_032760498;XP_032760500 homeobox protein TGIF2 protein-coding 625913380 Ccl17 C-C motif chemokine ligand 17 ENCODES a protein that exhibits CCR4 chemokine receptor binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); negative regulation of myoblast differentiation (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH allergic bronchopulmonary aspergillosis (ortholog); allergic contact dermatitis (ortholog); allergic disease (ortholog); FOUND IN extracellular region (ortholog) 17 1686327 1696183 + 22301074;30032202 116886437 MODEL JAAIVD010000011;XM_032887923 XP_032743814 C-C motif chemokine 17 protein-coding 625913388 LOC116906511 small nucleolar RNA U3 7 50357114 50357196 + 116906511 MODEL JAAIVD010000026 pseudo 625913389 LOC116893624 interferon-induced transmembrane protein 1-like 2 8509304 8510603 - 30032202 116893624 MODEL JAAIVD010000001;XM_032895337 XP_032751228 protein-coding 625913395 LOC116897622 small nucleolar RNA SNORD71 3 60059993 60060072 - 116897622 MODEL JAAIVD010000012;XR_004387603 snorna 625913398 Nxf1 nuclear RNA export factor 1 ENCODES a protein that exhibits mRNA binding (ortholog); RNA binding (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); poly(A)+ mRNA export from nucleus (ortholog); RNA export from nucleus (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; ASSOCIATED WITH intellectual disability (ortholog); FOUND IN cytoplasm (ortholog); nuclear inclusion body (ortholog); nuclear pore (ortholog) 2 9172750 9185752 - 22301074;30032202 116890928 MODEL JAAIVD010000001;XM_032891571 XP_032747462 protein-coding 625913423 LOC116901054 60S ribosomal protein L34-like 5 136910772 137058806 + 116901054 MODEL JAAIVD010000023 pseudo 625913424 LOC116908354 small nucleolar RNA SNORA16B/SNORA16A family 8 2722580 2722712 + 116908354 MODEL JAAIVD010000027;XR_004388904 snorna 625913427 Phyh phytanoyl-CoA 2-hydroxylase ENCODES a protein that exhibits carboxylic acid binding (ortholog); catalytic activity (ortholog); ferrous iron binding (ortholog); INVOLVED IN 2-oxobutyrate catabolic process (ortholog); 2-oxoglutarate metabolic process (ortholog); fatty acid alpha-oxidation (ortholog); PARTICIPATES IN phytanic acid degradation pathway; Refsum disease pathway; ASSOCIATED WITH Adult Refsum Disease, 1 (ortholog); Familial Hypophosphatemic Rickets (ortholog); fundus dystrophy (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); peroxisome (ortholog) 14 11282374 11300737 + 30032202 116883392 MODEL JAAIVD010000009;XM_032884515 XP_032740406 phytanoyl-CoA dioxygenase, peroxisomal protein-coding 625913440 LOC116908171 60S ribosomal protein L37a-like 8 48332175 48332479 - 116908171 MODEL JAAIVD010000027 pseudo 625913441 Zxdc ZXD family zinc finger C ENCODES a protein that exhibits C2H2 zinc finger domain binding (ortholog); LRR domain binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH IgA glomerulonephritis (ortholog) 6 56509837 56540754 - 30032202 116903510 MODEL JAAIVD010000024;XM_032906115 XP_032762006 zinc finger protein ZXDC protein-coding 625913455 LOC116886992 cytochrome c, somatic-like 18 49678584 49678943 - 22301074;30032202 116886992 MODEL JAAIVD010000013;XM_032888471 XP_032744362 protein-coding 625913458 Ankrd40cl ANKRD40 C-terminal like 9 51248907 51253561 - 116910130 MODEL JAAIVD010000002;XM_032913965 XP_032769856 putative ANKRD40 C-terminal-like protein protein-coding 625913466 LOC116912983 small nucleolar RNA SNORA17 11 35343751 35343880 + 116912983 MODEL JAAIVD010000006;XR_004389547 snorna 625913469 LOC116891245 uncharacterized LOC116891245 2 45762867 45765428 - 116891245 MODEL JAAIVD010000001;XR_004386823 ncrna 625913473 LOC116888956 gamma-glutamylaminecyclotransferase-like 1 110075434 110076066 - 30032202 116888956 MODEL JAAIVD010000025;XM_032890186 XP_032746077 protein-coding 625913477 LOC116900705 40S ribosomal protein S12-like 5 132168332 132168838 + 22301074;30032202 116900705 MODEL JAAIVD010000023;XM_032902408 XP_032758299 protein-coding 625913482 LOC116907161 olfactory receptor 145-like 8 31408980 31413615 + 22301074;30032202 116907161 MODEL JAAIVD010000027;XM_032910119;XM_032910120 XP_032766010;XP_032766011 protein-coding 625913489 Itm2b integral membrane protein 2B ENCODES a protein that exhibits amyloid-beta binding (ortholog); ATP binding (ortholog); INVOLVED IN extrinsic apoptotic signaling pathway in absence of ligand (ortholog); negative regulation of amyloid precursor protein biosynthetic process (ortholog); ASSOCIATED WITH cerebral amyloid angiopathy (ortholog); genetic disease (ortholog); hypertension (ortholog); FOUND IN extracellular region (ortholog); Golgi apparatus (ortholog); Golgi-associated vesicle membrane (ortholog) 12 50997590 51020550 + 30032202 116913138 MODEL JAAIVD010000007;XM_032917341 XP_032773232 protein-coding 625913499 LOC116896023 ubiquitin-like 3 181791068 181791477 + 116896023 MODEL JAAIVD010000012 pseudo 625913500 Tipin TIMELESS interacting protein INVOLVED IN cell cycle phase transition (ortholog); DNA damage checkpoint signaling (ortholog); DNA replication checkpoint signaling (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) 8 58584777 58602538 + 22301074;30032202 116907313 MODEL JAAIVD010000027;XM_032910259 XP_032766150 TIMELESS-interacting protein protein-coding 625913512 Ap3m2 adaptor related protein complex 3 subunit mu 2 INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); synaptic vesicle endocytosis (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); synaptic vesicle (ortholog) 13 63614708 63636331 + 22301074;30032202 116914553 MODEL JAAIVD010000008;XM_032918903 XP_032774794 AP-3 complex subunit mu-2 protein-coding 625913525 Wrap73 WD repeat containing, antisense to TP73 INVOLVED IN mitotic spindle assembly (ortholog); positive regulation of non-motile cilium assembly (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog) 1 6562228 6576927 - 22301074;30032202 116892137 MODEL JAAIVD010000025;XM_032893630;XM_032893638 XP_032749521;XP_032749529 WD repeat-containing protein WRAP73 protein-coding 625913546 LOC116901414 heat shock protein HSP 90-beta-like 5 32651410 32653957 + 22301074;30032202 116901414 MODEL JAAIVD010000023;XM_032903303 XP_032759194 protein-coding 625913551 LOC116909111 olfactory receptor 1468-like 9 44444727 44445665 + 22301074;30032202 116909111 MODEL JAAIVD010000002;XM_032912587 XP_032768478 protein-coding 625913554 Mrps34 mitochondrial ribosomal protein S34 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN mitochondrial translation (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 32 (ortholog); genetic disease (ortholog); Leigh disease (ortholog); FOUND IN mitochondrion (ortholog) 9 2175840 2176980 + 22301074;30032202 116909336 MODEL JAAIVD010000002;XM_032912880 XP_032768771 28S ribosomal protein S34, mitochondrial protein-coding 625913561 LOC116909909 C-C motif chemokine 9-like 9 87115336 87119428 + 22301074;30032202 116909909 MODEL JAAIVD010000002;XM_032913662 XP_032769553 protein-coding 625913569 LOC116886173 40S ribosomal protein S13-like 17 42679835 42680341 + 116886173 MODEL JAAIVD010000011 pseudo 625913570 LOC116908213 microtubule-associated protein 11-like 8 72612878 72615297 + 116908213 MODEL JAAIVD010000027 pseudo 625913571 LOC116888577 SNF-related serine/threonine-protein kinase-like X 71876646 71878990 + 22301074;30032202 116888577 MODEL JAAIVD010000014;XM_032889878 XP_032745769 protein-coding 625913576 Mpzl3 myelin protein zero like 3 INVOLVED IN extracellular matrix organization (ortholog); hair cycle (ortholog); ASSOCIATED WITH lung cancer (ortholog) 8 39586063 39606653 + 22301074;30032202 116906899 MODEL JAAIVD010000027;XM_032909810 XP_032765701 myelin protein zero-like protein 3 protein-coding 625913586 Odaph odontogenesis associated phosphoprotein INVOLVED IN positive regulation of biomineral tissue development (ortholog); positive regulation of enamel mineralization (ortholog); ASSOCIATED WITH amelogenesis imperfecta hypomaturation type 2A4 (ortholog) 11 4824106 4831693 + 30032202 116912135 MODEL JAAIVD010000006;XM_032916049 XP_032771940 protein-coding 625913592 LOC116915050 neutrophil antibiotic peptide NP-2-like 13 64824127 64824893 - 22301074;30032202 116915050 MODEL JAAIVD010000008;XM_032919462 XP_032775353 protein-coding 625913596 Kiaa1614 KIAA1614 ortholog 10 34633230 34666009 - 30032202 116911641 MODEL JAAIVD010000005;XM_032915600 XP_032771491 uncharacterized protein KIAA1614 homolog protein-coding 625913609 Shkbp1 SH3KBP1 binding protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive regulation of epidermal growth factor receptor signaling pathway (ortholog) 2 168589473 168602701 + 22301074 116892432 MODEL JAAIVD010000001;XM_032894122 XP_032750013 SH3KBP1-binding protein 1 protein-coding 625913631 LOC116889178 DDB1- and CUL4-associated factor 12-like protein 2 X 108202455 108204058 + 22301074;30032202 116889178 MODEL JAAIVD010000014;XM_032890342 XP_032746233 protein-coding 625913636 LOC116884028 60S ribosomal protein L11-like 14 26777098 26777596 - 116884028 MODEL JAAIVD010000009 pseudo 625913637 Kcnj5 potassium inwardly rectifying channel subfamily J member 5 ENCODES a protein that exhibits G-protein activated inward rectifier potassium channel activity (ortholog); inward rectifier potassium channel activity (ortholog); voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization (ortholog); INVOLVED IN membrane repolarization during atrial cardiac muscle cell action potential (ortholog); potassium ion import across plasma membrane (ortholog); regulation of heart rate by cardiac conduction (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH adenoma (ortholog); Andersen-Tawil syndrome (ortholog); atrial fibrillation (ortholog); FOUND IN external side of plasma membrane (ortholog); inward rectifier potassium channel complex (ortholog); T-tubule (ortholog) 8 28008238 28036141 - 22301074;30032202 116907840 MODEL JAAIVD010000027;XM_032911027;XM_032911028 XP_032766918;XP_032766919 G protein-activated inward rectifier potassium channel 4 protein-coding 625913649 Pum2 pumilio RNA binding family member 2 ENCODES a protein that exhibits lncRNA binding (ortholog); miRNA binding (ortholog); mRNA 3'-UTR binding (ortholog); INVOLVED IN adipose tissue development (ortholog); chromosome organization (ortholog); hair follicle development (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN cytoplasmic stress granule (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) 7 28913555 28993274 + 30032202 116906300 MODEL JAAIVD010000026;XM_032909193;XM_032909194;XM_032909195;XM_032909196;XM_032909197;XM_032909198;XM_032909199;XM_032909200;XM_032909201;XM_032909203;XM_032909204;XM_032909205;XM_032909206;XM_032909207;XM_032909208 XP_032765084;XP_032765085;XP_032765086;XP_032765087;XP_032765088;XP_032765089;XP_032765090;XP_032765091;XP_032765092;XP_032765094;XP_032765095;XP_032765096;XP_032765097;XP_032765098;XP_032765099 pumilio homolog 2 protein-coding 625913699 LOC116891115 60S ribosomal protein L35a-like 2 34849184 34849511 + 116891115 MODEL JAAIVD010000001 pseudo 625913700 LOC116906114 delta-aminolevulinic acid dehydratase-like 7 82226238 82227215 + 116906114 MODEL JAAIVD010000026 pseudo 625913701 Tm4sf4 transmembrane 4 L six family member 4 INVOLVED IN tissue regeneration (ortholog); ASSOCIATED WITH liver disease (ortholog) 3 96006899 96029183 + 22301074;30032202 116895865 MODEL JAAIVD010000012;XM_032896967 XP_032752858 transmembrane 4 L6 family member 4 protein-coding 625913709 Pgm3 phosphoglucomutase 3 ENCODES a protein that exhibits phosphoacetylglucosamine mutase activity (ortholog); INVOLVED IN hemopoiesis (ortholog); protein N-linked glycosylation (ortholog); protein O-linked glycosylation (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; glycogen biosynthetic pathway; ASSOCIATED WITH cervical cancer (ortholog); genetic disease (ortholog); hyper IgE syndrome (ortholog) 8 80599200 80617460 - 22301074;30032202 116906809 MODEL JAAIVD010000027;XM_032909683 XP_032765574 phosphoacetylglucosamine mutase protein-coding 625913726 Cacybp calcyclin binding protein ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein domain specific binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cardiac muscle cell differentiation (ortholog); cellular response to calcium ion (ortholog); cellular response to leukemia inhibitory factor (ortholog); ASSOCIATED WITH myocardial infarction (ortholog); Neoplasm Metastasis (ortholog); pancreatic cancer (ortholog); FOUND IN beta-catenin destruction complex (ortholog); cell body (ortholog); cytoplasm (ortholog) 10 39490152 39500799 - 22301074;30032202 116911153 MODEL JAAIVD010000005;XM_032915008 XP_032770899 calcyclin-binding protein protein-coding 625913736 LOC116913355 eosinophil cationic protein-like 12 71284644 71285114 + 22301074;30032202 116913355 MODEL JAAIVD010000007;XM_032917509 XP_032773400 protein-coding 625913739 LOC116893997 olfactory receptor 51I2-like 2 101580819 101581763 + 22301074 116893997 MODEL JAAIVD010000001;XM_032895712 XP_032751603 protein-coding 625913742 Cnga4 cyclic nucleotide gated channel subunit alpha 4 ENCODES a protein that exhibits cGMP binding (ortholog); intracellularly cAMP-activated cation channel activity (ortholog); intracellularly cGMP-activated cation channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); potassium ion transport (ortholog); sensory perception of smell (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; FOUND IN intracellular cyclic nucleotide activated cation channel complex (ortholog); non-motile cilium membrane (ortholog); perikaryon (ortholog) 2 104239539 104243604 + 30032202 116894148 MODEL JAAIVD010000001;XM_032895867 XP_032751758 cyclic nucleotide-gated cation channel alpha-4 protein-coding 625913752 Fam180b family with sequence similarity 180 member B 5 65066195 65068729 - 116900866 MODEL JAAIVD010000023;XM_032902550 XP_032758441 protein FAM180B protein-coding 625913757 LOC116897787 olfactory receptor 2M3-like 4 4367500 4368447 - 22301074 116897787 MODEL JAAIVD010000003;XM_032899209 XP_032755100 protein-coding 625913760 LOC116885528 annexin A7-like 1 151185475 151186833 + 116885528 MODEL JAAIVD010000025 pseudo 625913761 Zcchc3 zinc finger CCHC-type containing 3 ENCODES a protein that exhibits double-stranded DNA binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); cellular response to exogenous dsRNA (ortholog); defense response to virus (ortholog); FOUND IN cytoplasm (ortholog) 5 131725232 131728068 - 22301074;30032202 116902122 MODEL JAAIVD010000023;XM_032904437 XP_032760328 zinc finger CCHC domain-containing protein 3 protein-coding 625913766 LOC116914112 small nucleolar RNA SNORA48 12 36916429 36916572 + 116914112 MODEL JAAIVD010000007;XR_004389677 snorna 625913769 Naaa N-acylethanolamine acid amidase ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); fatty acid amide hydrolase activity (ortholog); hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds (ortholog); INVOLVED IN fatty acid metabolic process (ortholog); N-acylethanolamine metabolic process (ortholog); N-acylphosphatidylethanolamine metabolic process (ortholog); FOUND IN cytoplasm (ortholog); lysosome (ortholog); membrane (ortholog) 11 5107481 5125297 - 22301074 116912704 MODEL JAAIVD010000006;XM_032916832 XP_032772723 N-acylethanolamine-hydrolyzing acid amidase protein-coding 625913783 LOC116894912 U7 small nuclear RNA 2 109070805 109070868 + 116894912 MODEL JAAIVD010000001;XR_004387114 snrna 625913786 Ppip5k1 diphosphoinositol pentakisphosphate kinase 1 ENCODES a protein that exhibits 5-diphosphoinositol pentakisphosphate 1-kinase activity (ortholog); inositol hexakisphosphate 5-kinase activity (ortholog); inositol hexakisphosphate kinase activity (ortholog); INVOLVED IN inositol metabolic process (ortholog); PARTICIPATES IN inositol phosphate metabolic pathway; FOUND IN cytosol (ortholog); plasma membrane (ortholog) 5 99463696 99503000 - 30032202 116901856 MODEL JAAIVD010000023;XM_032904051 XP_032759942 inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 protein-coding 625913820 Shprh SNF2 histone linker PHD RING helicase ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin protein ligase binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN DNA damage response (ortholog); protein polyubiquitination (ortholog) 2 225993260 226058970 - 22301074;30032202 116893021 MODEL JAAIVD010000001;XM_032894981 XP_032750872 E3 ubiquitin-protein ligase SHPRH protein-coding 625913853 LOC116887363 olfactory receptor 10C1-like 18 10624527 10625498 + 22301074 116887363 MODEL JAAIVD010000013;XM_032888958;XM_032888959 XP_032744849;XP_032744850 olfactory receptor 10A2-like protein-coding 625913860 Gabpb2 GA binding protein transcription factor subunit beta 2 ENCODES a protein that exhibits identical protein binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 3 62029906 62062820 + 22301074;30032202 116896562 MODEL JAAIVD010000012;XM_032897758;XM_032897759 XP_032753649;XP_032753650 GA-binding protein subunit beta-2 protein-coding 625913875 Slc39a8 solute carrier family 39 member 8 ENCODES a protein that exhibits monoatomic cation:bicarbonate symporter activity (ortholog); zinc:bicarbonate symporter activity (ortholog); INVOLVED IN arginine metabolic process (ortholog); bicarbonate transport (ortholog); cadmium ion transmembrane transport (ortholog); PARTICIPATES IN iron uptake pathway; ASSOCIATED WITH congenital disorder of glycosylation type IIn (ortholog); Crohn's disease (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); lysosomal membrane (ortholog) 3 23217584 23278645 - 22301074;30032202 116896220 MODEL JAAIVD010000012;XM_032897275 XP_032753166 zinc transporter ZIP8 protein-coding 625913888 LOC116894948 small nucleolar RNA SNORA72 2 172621922 172622053 + 116894948 MODEL JAAIVD010000001;XR_004387144 snorna 625913891 Trnan-guu transfer RNA asparagine (anticodon GUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60959070 60959143 - 116897694 MODEL JAAIVD010000012 trna 625913892 Ak4 adenylate kinase 4 ENCODES a protein that exhibits AMP kinase activity (ortholog); nucleoside diphosphate kinase activity (ortholog); nucleoside triphosphate adenylate kinase activity (ortholog); INVOLVED IN AMP metabolic process (ortholog); ATP metabolic process (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN de novo purine biosynthetic pathway; ASSOCIATED WITH acute kidney tubular necrosis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 1 53086990 53139905 - 22301074;30032202 116899707 MODEL JAAIVD010000025;XM_032901747 XP_032757638 adenylate kinase 4, mitochondrial protein-coding 625913901 LOC116896782 40S ribosomal protein S26 3 81381195 81381638 - 22301074;30032202 116896782 MODEL JAAIVD010000012;XM_032898241 XP_032754132 protein-coding 625913906 Pithd1 PITH domain containing 1 INVOLVED IN penetration of cumulus oophorus (ortholog); penetration of zona pellucida (ortholog); positive regulation of DNA-templated transcription (ortholog); FOUND IN cytoplasm (ortholog); sperm cytoplasmic droplet (ortholog) 1 22243867 22254295 + 30032202 116894460 MODEL JAAIVD010000025;XM_032896173 XP_032752064 PITH domain-containing protein 1 protein-coding 625913916 LOC116908244 rRNA-processing protein FCF1 homolog 8 86884823 86885404 + 116908244 MODEL JAAIVD010000027 pseudo 625913917 Agap2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 ENCODES a protein that exhibits ATP binding (ortholog); GTP binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to glycine (ortholog); endosomal transport (ortholog); ASSOCIATED WITH Experimental Seizures (ortholog); Memory Disorders (ortholog); obesity (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) 1 205503539 205520421 + 22301074;30032202 116909789 MODEL JAAIVD010000025;XM_032913489;XM_032913495;XM_032913501 XP_032769380;XP_032769386;XP_032769392 arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 protein-coding 625913948 LOC116895503 60S ribosomal protein L31-like 3 107955585 107956008 + 22301074;30032202 116895503 MODEL JAAIVD010000012;XM_032896756 XP_032752647 protein-coding 625913953 Emc9 ER membrane protein complex subunit 9 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); FOUND IN cytoplasm (ortholog); EMC complex (ortholog) 12 69422896 69427110 + 22301074;30032202 116913675 MODEL JAAIVD010000007;XM_032917963 XP_032773854 protein-coding 625913962 LOC116913275 60S ribosomal protein L4-like 12 85537261 85544675 + 116913275 MODEL JAAIVD010000007 pseudo 625913963 Apoh apolipoprotein H ENCODES a protein that exhibits identical protein binding (ortholog); lipase binding (ortholog); lipid binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); blood coagulation, intrinsic pathway (ortholog); chylomicron remodeling (ortholog); PARTICIPATES IN coagulation cascade pathway; ASSOCIATED WITH antiphospholipid syndrome (ortholog); arteriosclerosis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cell surface (ortholog); chylomicron (ortholog); extracellular region (ortholog) 9 70728623 70741993 - 2771654 116908814 MODEL JAAIVD010000002;X15551;XM_032912220;XM_032912221 CAA33556;XP_032768111;XP_032768112 beta-2-glycoprotein 1 protein-coding 625913978 Dnase1l2 deoxyribonuclease 1 like 2 INVOLVED IN corneocyte development (ortholog); DNA catabolic process (ortholog); hair follicle development (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog) 9 1730572 1732767 - 22301074;30032202 116910468 MODEL JAAIVD010000002;XM_032914340 XP_032770231 deoxyribonuclease-1-like 2 protein-coding 625913988 LOC116912383 uncharacterized LOC116912383 11 66468714 66523291 - 116912383 MODEL JAAIVD010000006;XR_004389452;XR_004389453 ncrna 625913996 LOC116897717 60S ribosomal protein L29-like 4 5214929 5221619 + 116897717 MODEL JAAIVD010000003 pseudo 625913997 Ctps2 CTP synthase 2 ENCODES a protein that exhibits CTP synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN CTP biosynthetic process (ortholog); PARTICIPATES IN de novo pyrimidine biosynthetic pathway; ASSOCIATED WITH colorectal cancer (ortholog); Laterality Defects, Autosomal Dominant (ortholog); FOUND IN cytoophidium (ortholog); cytoplasm (ortholog); mitochondrion (ortholog) X 23343742 23461590 - 22301074;30032202 116888394 MODEL JAAIVD010000014;XM_032889667 XP_032745558 protein-coding 625914019 Mecr mitochondrial trans-2-enoyl-CoA reductase ENCODES a protein that exhibits enoyl-[acyl-carrier-protein] reductase (NADPH) activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); fatty acid metabolic process (ortholog); intracellular iron ion homeostasis (ortholog); PARTICIPATES IN fatty acid elongation pathway; ASSOCIATED WITH childhood-onset dystonia with optic atrophy and basal ganglia abnormalities (ortholog); dystonia (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) 1 26385151 26411117 - 30032202 116895724 MODEL JAAIVD010000025;XM_032896908;XM_032896911;XM_032896913;XM_032896915;XM_032896919 XP_032752799;XP_032752802;XP_032752804;XP_032752806;XP_032752810 enoyl-[acyl-carrier-protein] reductase, mitochondrial protein-coding 625914046 Mzf1 myeloid zinc finger 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); protein homodimerization activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of DNA-templated transcription (ortholog); FOUND IN nucleoplasm (ortholog) 2 174132249 174144494 + 30032202 116892617 MODEL JAAIVD010000001;XM_032894424 XP_032750315 protein-coding 625914056 Apela apelin receptor early endogenous ligand ENCODES a protein that exhibits apelin receptor binding (ortholog); hormone activity (ortholog); INVOLVED IN apelin receptor signaling pathway (ortholog); coronary vasculature development (ortholog); embryonic heart tube development (ortholog); ASSOCIATED WITH pre-eclampsia (ortholog); FOUND IN extracellular region (ortholog) 13 24118305 24127640 + 22301074 116914496 MODEL JAAIVD010000008;XM_032918810 XP_032774701 protein-coding 625914063 LOC116895613 uncharacterized LOC116895613 3 169698075 169707699 + 116895613 MODEL JAAIVD010000012;XR_004387295 ncrna 625914067 LOC116889578 U6 spliceosomal RNA X 9372047 9372153 + 116889578 MODEL JAAIVD010000014;XR_004386494 snrna 625914070 Dnajc24 DnaJ heat shock protein family (Hsp40) member C24 ENCODES a protein that exhibits ATPase activator activity (ortholog); ferrous iron binding (ortholog); zinc ion binding (ortholog); INVOLVED IN positive regulation of ATP-dependent activity (ortholog); protein histidyl modification to diphthamide (ortholog); FOUND IN actin cytoskeleton (ortholog) 5 83879155 83923706 - 30032202 116901716 MODEL JAAIVD010000023;XM_032903847 XP_032759738 dnaJ homolog subfamily C member 24 protein-coding 625914079 Rbm5 RNA binding motif protein 5 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); spliceosomal complex assembly (ortholog); ASSOCIATED WITH spermatogenic failure 57 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 8 99063296 99092143 - 22301074;30032202 116907543 MODEL JAAIVD010000027;XM_032910564;XM_032910565;XM_032910566;XM_032910567 XP_032766455;XP_032766456;XP_032766457;XP_032766458 RNA-binding protein 5 protein-coding 625914117 Apoc4 apolipoprotein C4 INVOLVED IN lipid storage (ortholog); triglyceride homeostasis (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN high-density lipoprotein particle (ortholog); very-low-density lipoprotein particle (ortholog) 2 170934659 170938764 + 30032202 116892516 MODEL JAAIVD010000001;XM_032894272 XP_032750163 apolipoprotein C-IV protein-coding 625914124 LOC116893321 serum amyloid A-1 protein-like 2 152624422 152628401 + 116893321 MODEL JAAIVD010000001 pseudo 625914125 Mboat2 membrane bound glycerophospholipid O-acyltransferase 2 ENCODES a protein that exhibits 1-acylglycerophosphocholine O-acyltransferase activity (ortholog); 1-acylglycerophosphoethanolamine O-acyltransferase activity (ortholog); 1-acylglycerophosphoserine O-acyltransferase activity (ortholog); INVOLVED IN phosphatidylcholine acyl-chain remodeling (ortholog); phosphatidylethanolamine acyl-chain remodeling (ortholog); phosphatidylserine acyl-chain remodeling (ortholog); ASSOCIATED WITH Hepatomegaly (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 7 38434193 38556468 + 30032202 116904918 MODEL JAAIVD010000026;XM_032907527;XM_032907528;XM_032907529 XP_032763418;XP_032763419;XP_032763420 lysophospholipid acyltransferase 2;membrane bound O-acyltransferase domain containing 2 protein-coding 625914151 LOC116896050 pyruvate kinase PKM-like 3 199681274 199688860 + 116896050 MODEL JAAIVD010000012 pseudo 625914152 Asah1 N-acylsphingosine amidohydrolase 1 ENCODES a protein that exhibits hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides (ortholog); N-acylsphingosine amidohydrolase activity (ortholog); nuclear receptor binding (ortholog); INVOLVED IN cellular response to tumor necrosis factor (ortholog); ceramide biosynthetic process (ortholog); ceramide catabolic process (ortholog); PARTICIPATES IN ceramide signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); benign epilepsy with centrotemporal spikes (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog); extracellular region (ortholog) 13 46194911 46225686 + 22301074;30032202 116915067 MODEL JAAIVD010000008;XM_032919485 XP_032775376 acid ceramidase protein-coding 625914170 Tbc1d14 TBC1 domain family member 14 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN negative regulation of autophagy (ortholog); recycling endosome to Golgi transport (ortholog); regulation of autophagosome assembly (ortholog); FOUND IN autophagosome (ortholog); Golgi apparatus (ortholog); recycling endosome (ortholog) 11 68521234 68615206 + 30032202 116912885 MODEL JAAIVD010000006;XM_032917122;XM_032917123;XM_032917124;XM_032917125;XM_032917126 XP_032773013;XP_032773014;XP_032773015;XP_032773016;XP_032773017 protein-coding 625914202 LOC116914184 U6 spliceosomal RNA 12 21664761 21664856 + 116914184 MODEL JAAIVD010000007 pseudo 625914203 LOC116905700 60S ribosomal protein L37-like 7 62391557 62391934 + 22301074;30032202 116905700 MODEL JAAIVD010000026;XM_032908676 XP_032764567 protein-coding 625914208 LOC116890323 U6 spliceosomal RNA 1 154891167 154891273 - 116890323 MODEL JAAIVD010000025;XR_004386546 snrna 625914211 Ppp2r5b protein phosphatase 2 regulatory subunit B'beta INVOLVED IN cellular response to growth factor stimulus (ortholog); negative regulation of G0 to G1 transition (ortholog); positive regulation of neuron projection development (ortholog) 2 1454027 1462018 + 22301074;30032202 116890669 MODEL JAAIVD010000001;XM_032891075 XP_032746966 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform protein-coding 625914229 LOC116894055 olfactory receptor 51F2-like 2 102749325 102750269 - 22301074 116894055 MODEL JAAIVD010000001;XM_032895777 XP_032751668 protein-coding 625914232 LOC116885978 U4 spliceosomal RNA 16 9245119 9245254 + 116885978 MODEL JAAIVD010000004;XR_004386059 snrna 625914235 LOC116889705 chaperone protein DnaK-like 22301074;30032202 116889705 MODEL JAAIVD010000059;XM_032890587 XP_032746478 protein-coding 625914236 LOC116891289 oogenesin-3-like 1 52630965 52631643 - 30032202 116891289 MODEL JAAIVD010000025;XM_032892231 XP_032748122 protein-coding 625914240 Hacd4 3-hydroxyacyl-CoA dehydratase 4 ENCODES a protein that exhibits enzyme binding (ortholog); very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase activity (ortholog); INVOLVED IN fatty acid elongation (ortholog); very long-chain fatty acid biosynthetic process (ortholog); FOUND IN endoplasmic reticulum (ortholog) 1 65688026 65713751 + 30032202 116900401 MODEL JAAIVD010000025;XM_032902150 XP_032758041 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4 protein-coding 625914251 Raly RALY heterogeneous nuclear ribonucleoprotein ENCODES a protein that exhibits identical protein binding (ortholog); RNA binding (ortholog); transcription coregulator activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 5 134168933 134238944 + 22301074;30032202 116902167 MODEL JAAIVD010000023;XM_032904508;XM_032904509;XM_032904510 XP_032760399;XP_032760400;XP_032760401 RNA-binding protein Raly protein-coding 625914271 Nr2f2 nuclear receptor subfamily 2 group F member 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); blood vessel morphogenesis (ortholog); female gonad development (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); 46,XX sex reversal 5 (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN nucleus (ortholog) 2 130020767 130034500 + 22301074;30032202 116891976 MODEL JAAIVD010000001;XM_032893416;XM_032893417;XM_032893418 XP_032749307;XP_032749308;XP_032749309 COUP transcription factor 2 protein-coding 625914286 Fxyd5 FXYD domain containing ion transport regulator 5 ENCODES a protein that exhibits actin binding (ortholog); cadherin binding (ortholog); ion channel regulator activity (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) 2 164989414 164999135 + 22301074;30032202 116892293 MODEL JAAIVD010000001;XM_032893901 XP_032749792 FXYD domain-containing ion transport regulator 5 protein-coding 625914299 St6galnac3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 ENCODES a protein that exhibits sialyltransferase activity (ortholog); INVOLVED IN glycoprotein metabolic process (ortholog); glycosphingolipid metabolic process (ortholog); glycosylceramide metabolic process (ortholog) 3 7922478 8425505 + 30032202 116896146 MODEL JAAIVD010000012;XM_032897130 XP_032753021 alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 protein-coding 625914308 Ddx21 DExD-box helicase 21 ENCODES a protein that exhibits 7SK snRNA binding (ortholog); double-stranded RNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of myeloid dendritic cell cytokine production (ortholog); positive regulation of transcription by RNA polymerase III (ortholog); FOUND IN chromosome (ortholog); cytosol (ortholog); nucleolus (ortholog) 18 28416128 28435161 - 22301074;30032202 116887048 MODEL JAAIVD010000013;XM_032888539 XP_032744430 nucleolar RNA helicase 2 protein-coding 625914327 Clec7a C-type lectin domain containing 7A ENCODES a protein that exhibits (1->3)-beta-D-glucan binding (ortholog); (1->3)-beta-D-glucan immune receptor activity (ortholog); carbohydrate binding (ortholog); INVOLVED IN antifungal innate immune response (ortholog); apoptotic signaling pathway (ortholog); cell activation (ortholog); ASSOCIATED WITH aspergillosis (ortholog); Candidiasis, Familial, 4 (ortholog); chronic mucocutaneous candidiasis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); external side of plasma membrane (ortholog) 6 18131910 18143037 + 30032202 116904562 MODEL JAAIVD010000024;XM_032907358;XM_032907359 XP_032763249;XP_032763250 C-type lectin domain family 7 member A protein-coding 625914339 LOC116886034 olfactory receptor 10K2-like 17 16735032 16735976 - 22301074 116886034 MODEL JAAIVD010000011;XM_032887327 XP_032743218 protein-coding 625914342 Cryz crystallin zeta ENCODES a protein that exhibits identical protein binding (ortholog); mRNA 3'-UTR binding (ortholog); NADH binding (ortholog); INVOLVED IN mRNA stabilization (ortholog); protein homotetramerization (ortholog); xenobiotic catabolic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) 3 6825230 6853370 - 22301074;30032202 116896139 MODEL JAAIVD010000012;XM_032897123 XP_032753014 quinone oxidoreductase protein-coding 625914355 Clic2 chloride intracellular channel 2 ENCODES a protein that exhibits glutathione peroxidase activity (ortholog); glutathione transferase activity (ortholog); INVOLVED IN regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion (ortholog); regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum (ortholog); PARTICIPATES IN cimetidine pharmacodynamics pathway; esomeprazole pharmacodynamics pathway; famotidine pharmacodynamics pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); X-linked intellectual disability-cardiomegaly-congestive heart failure syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) 18 11144886 11150436 - 116887347 MODEL JAAIVD010000013;XM_032888940 XP_032744831 chloride intracellular channel protein 2 protein-coding 625914364 Txndc16 thioredoxin domain containing 16 FOUND IN endoplasmic reticulum lumen (ortholog) 12 77817569 77883425 + 116913758 MODEL JAAIVD010000007;XM_032918065 XP_032773956 thioredoxin domain-containing protein 16 protein-coding 625914389 LOC116904129 protein piccolo-like 1 152008413 152074904 - 30032202 116904129 MODEL JAAIVD010000025;XM_032907019 XP_032762910 protein-coding 625914399 Gata5 GATA binding protein 5 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN aortic valve morphogenesis (ortholog); cardiac jelly development (ortholog); cellular response to BMP stimulus (ortholog); ASSOCIATED WITH acute myocardial infarction (ortholog); aortic valve disease 1 (ortholog); ARTERIAL DISSECTION (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) 5 157403484 157411690 - 22301074;30032202 116902409 MODEL JAAIVD010000023;XM_032904938 XP_032760829 transcription factor GATA-5 protein-coding 625914409 LOC116891525 ATPase family AAA domain-containing protein 3 1 4867562 4887469 + 22301074;30032202 116891525 MODEL JAAIVD010000025;XM_032892676;XM_032892683;XR_004386845 XP_032748567;XP_032748574 protein-coding 625914435 Gemin5 gem nuclear organelle associated protein 5 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); ribosome binding (ortholog); RNA 7-methylguanosine cap binding (ortholog); INVOLVED IN regulation of translation (ortholog); spliceosomal snRNP assembly (ortholog); ASSOCIATED WITH essential tremor (ortholog); genetic disease (ortholog); neurodevelopmental disorder with cerebellar atrophy and motor dysfunction (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) 9 40072903 40118135 + 22301074 116908669 MODEL JAAIVD010000002;XM_032911952;XM_032911953;XM_032911954;XM_032911956;XM_032911957;XM_032911958;XM_032911959;XM_032911960 XP_032767843;XP_032767844;XP_032767845;XP_032767847;XP_032767848;XP_032767849;XP_032767850;XP_032767851 gem-associated protein 5 protein-coding 625914481 LOC116883929 glyceraldehyde-3-phosphate dehydrogenase-like 14 9187615 9191654 + 116883929 MODEL JAAIVD010000009 pseudo 625914482 LOC116909865 olfactory receptor 2AK2-like 9 39454033 39454953 - 22301074 116909865 MODEL JAAIVD010000002;XM_032913593 XP_032769484 protein-coding 625914485 Lrrc23 leucine rich repeat containing 23 INVOLVED IN flagellated sperm motility (ortholog); radial spoke assembly (ortholog); ASSOCIATED WITH spermatogenic failure 92 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); sperm flagellum (ortholog) 6 23104472 23114856 + 22301074;30032202 116903280 MODEL JAAIVD010000024;XM_032905699;XM_032905700;XM_032905701;XM_032905702;XR_004388266;XR_004388267 XP_032761590;XP_032761591;XP_032761592;XP_032761593 leucine-rich repeat-containing protein 23 protein-coding 625914513 LOC116907208 serine/threonine-protein kinase Sgk1-like 8 6820387 6844099 - 22301074 116907208 MODEL JAAIVD010000027;XM_032910177 XP_032766068 protein-coding 625914520 LOC116898753 coiled-coil-helix-coiled-coil-helix domain-containing protein 2-like 4 16169600 16171796 - 116898753 MODEL JAAIVD010000003 pseudo 625914521 Cilk1 ciliogenesis associated kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein kinase activity (ortholog); INVOLVED IN cilium assembly (ortholog); intracellular signal transduction (ortholog); intraciliary anterograde transport (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); coloboma (ortholog); cranioectodermal dysplasia (ortholog); FOUND IN ciliary basal body (ortholog); ciliary base (ortholog); ciliary tip (ortholog) 8 72359828 72418218 + 22301074;30032202 116908307 MODEL JAAIVD010000027;XM_032911585;XM_032911587 XP_032767476;XP_032767478 serine/threonine-protein kinase ICK protein-coding 625914542 LOC116914261 beta-defensin 33 13 64902536 64905046 - 30032202 116914261 MODEL JAAIVD010000008;XM_032918474 XP_032774365 protein-coding 625914548 C13H13orf46 chromosome 13 C13orf46 homolog 13 70143756 70155837 + 116914802 MODEL JAAIVD010000008;XM_032919252 XP_032775143 uncharacterized protein C13orf46 homolog protein-coding 625914561 LOC116885214 rho guanine nucleotide exchange factor 18 16 1311437 1373036 + 22301074 116885214 MODEL JAAIVD010000004;XM_032886444;XM_032886445;XM_032886446;XM_032886447 XP_032742335;XP_032742336;XP_032742337;XP_032742338 protein-coding 625914592 LOC116898014 60S ribosomal protein L35a-like 4 73163822 73164153 + 116898014 MODEL JAAIVD010000003 pseudo 625914593 LOC116890375 U6 spliceosomal RNA 1 13234862 13234959 + 116890375 MODEL JAAIVD010000025 pseudo 625914594 LOC116889433 U6 spliceosomal RNA X 47493771 47493876 - 116889433 MODEL JAAIVD010000014;XR_004386395 snrna 625914597 Lig3 DNA ligase 3 ENCODES a protein that exhibits DNA ligase (ATP) activity (ortholog); DNA ligase activity (ortholog); INVOLVED IN base-excision repair (ortholog); double-strand break repair (ortholog); double-strand break repair via alternative nonhomologous end joining (ortholog); PARTICIPATES IN nucleotide excision repair pathway; ASSOCIATED WITH Cardiac Arrhythmias (ortholog); genetic disease (ortholog); middle cerebral artery infarction (ortholog); FOUND IN condensed nuclear chromosome (ortholog); DNA ligase III-XRCC1 complex (ortholog); mitochondrion (ortholog) 9 87711493 87733192 - 22301074;30032202 116910048 MODEL JAAIVD010000002;XM_032913838;XM_032913839;XM_032913840 XP_032769729;XP_032769730;XP_032769731 protein-coding 625914625 Gtf2ird1 GTF2I repeat domain containing 1 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); transition between slow and fast fiber (ortholog); ASSOCIATED WITH Childhood Schizophrenia (ortholog); Craniofacial Abnormalities (ortholog); Williams-Beuren syndrome (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 16 19594830 19699864 + 22301074;30032202 116885131 MODEL JAAIVD010000004;XM_032886288;XM_032886289;XM_032886290;XM_032886291;XM_032886292;XM_032886293;XM_032886294;XM_032886295;XM_032886296;XM_032886297;XM_032886298;XM_032886300;XM_032886301;XM_032886302;XM_032886303;XM_032886304;XM_032886305;XM_032886306;XM_032886307 XP_032742179;XP_032742180;XP_032742181;XP_032742182;XP_032742183;XP_032742184;XP_032742185;XP_032742186;XP_032742187;XP_032742188;XP_032742189;XP_032742191;XP_032742192;XP_032742193;XP_032742194;XP_032742195;XP_032742196;XP_032742197;XP_032742198 general transcription factor II-I repeat domain-containing protein 1 protein-coding 625914701 Klhdc10 kelch domain containing 10 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN rescue of stalled cytosolic ribosome (ortholog); ubiquitin-dependent protein catabolic process via the C-end degron rule pathway (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) 6 109102210 109159466 - 22301074;30032202 116904001 MODEL JAAIVD010000024;XM_032906810;XM_032906811 XP_032762701;XP_032762702 kelch domain-containing protein 10 protein-coding 625914716 LOC116890423 U7 small nuclear RNA 1 221308443 221308505 - 116890423 MODEL JAAIVD010000025;XR_004386622 snrna 625914719 LOC116884980 40S ribosomal protein S18-like 15 52546852 52547311 + 116884980 MODEL JAAIVD010000010 pseudo 625914720 Hid1 HID1 domain containing INVOLVED IN dense core granule biogenesis (ortholog); insulin processing (ortholog); response to glucose (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 105 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic microtubule (ortholog); cytoplasmic side of Golgi membrane (ortholog) 9 68733369 68753740 + 30032202 116909264 MODEL JAAIVD010000002;XM_032912790;XM_032912791 XP_032768681;XP_032768682 protein HID1 protein-coding 625914745 Styx serine/threonine/tyrosine interacting protein ENCODES a protein that exhibits F-box domain binding (ortholog); pseudophosphatase activity (ortholog); INVOLVED IN negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process (ortholog); regulation of ERK1 and ERK2 cascade (ortholog); spermatogenesis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 12 77655353 77686630 - 22301074;30032202 116914055 MODEL JAAIVD010000007;XM_032918338;XM_032918339 XP_032774229;XP_032774230 serine/threonine/tyrosine-interacting protein protein-coding 625914763 Clhc1 clathrin heavy chain linker domain containing 1 ENCODES a protein that exhibits AP-1 adaptor complex binding (ortholog); AP-3 adaptor complex binding (ortholog) 11 97171147 97194185 + 116912165 MODEL JAAIVD010000006;XM_032916085;XM_032916086 XP_032771976;XP_032771977 clathrin heavy chain linker domain-containing protein 1 protein-coding 625914782 Rps20 ribosomal protein S20 ENCODES a protein that exhibits MDM2/MDM4 family protein binding (ortholog); structural constituent of ribosome (ortholog); ubiquitin ligase inhibitor activity (ortholog); INVOLVED IN positive regulation of signal transduction by p53 class mediator (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Colorectal Cancer 10 (ortholog); Diamond-Blackfan anemia (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) 7 72894476 72895672 + 22301074;2357470;30032202 116905088 MODEL JAAIVD010000026;X51537;XM_032907809 CAA35917;XP_032763700 40S ribosomal protein S20 protein-coding 625914790 Polg2 DNA polymerase gamma 2, accessory subunit ENCODES a protein that exhibits DNA polymerase binding (ortholog); DNA polymerase processivity factor activity (ortholog); DNA-directed DNA polymerase activity (ortholog); INVOLVED IN DNA-templated DNA replication (ortholog); in utero embryonic development (ortholog); mitochondrial DNA metabolic process (ortholog); ASSOCIATED WITH autosomal dominant progressive external ophthalmoplegia with mitochondrial DNA deletions 4 (ortholog); Experimental Diabetes Mellitus (ortholog); mitochondrial DNA depletion syndrome 16 (ortholog); FOUND IN gamma DNA polymerase complex (ortholog); mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog) 9 72348815 72359511 + 30032202 116909932 MODEL JAAIVD010000002;XM_032913701 XP_032769592 DNA polymerase subunit gamma-2, mitochondrial protein-coding 625914802 LOC116913639 uncharacterized LOC116913639 12 55585717 55589309 + 116913639 MODEL JAAIVD010000007;XR_004389633 ncrna 625914807 Txnip thioredoxin interacting protein ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to tumor cell (ortholog); keratinocyte differentiation (ortholog); negative regulation of cell division (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); COVID-19 (ortholog); Diabetic Nephropathies (ortholog); FOUND IN cytoplasm (ortholog) 3 60743208 60747117 - 30032202 116896509 MODEL JAAIVD010000012;XM_032897691 XP_032753582 thioredoxin-interacting protein protein-coding 625914819 LOC116904800 U4 spliceosomal RNA 6 114393299 114393437 + 116904800 MODEL JAAIVD010000024;XR_004388456 snrna 625914822 Bean1 brain expressed associated with NEDD4 1 ASSOCIATED WITH spinocerebellar ataxia 31 (ortholog) 17 12468233 12514903 + 116886365 MODEL JAAIVD010000011;XM_032887825 XP_032743716 protein BEAN1 protein-coding 625914831 LOC116899399 60S ribosomal protein L30-like 4 131843217 131843613 + 30032202 116899399 MODEL JAAIVD010000003;XM_032901130 XP_032757021 protein-coding 625914835 LOC116914060 60S ribosomal protein L23a-like 12 72326619 72327080 - 116914060 MODEL JAAIVD010000007 pseudo 625914836 LOC116899391 10 kDa heat shock protein, mitochondrial 4 129540710 129588633 + 22301074;30032202 116899391 MODEL JAAIVD010000003;XM_032901114;XM_032901115;XM_032901116 XP_032757005;XP_032757006;XP_032757007 MOB-like protein phocein protein-coding 625914860 Mthfsd methenyltetrahydrofolate synthetase domain containing 17 40748133 40759654 - 22301074;30032202 116886471 MODEL JAAIVD010000011;XM_032887974 XP_032743865 methenyltetrahydrofolate synthase domain-containing protein protein-coding 625914872 LOC116902901 high mobility group protein B1-like 6 106450019 106450773 + 116902901 MODEL JAAIVD010000024 pseudo 625914873 Tbp TATA-box binding protein ENCODES a protein that exhibits aryl hydrocarbon receptor binding (ortholog); core promoter sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN mRNA transcription by RNA polymerase II (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase III (ortholog); PARTICIPATES IN cisplatin drug pathway; RNA polymerase I transcription pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); genetic disease (ortholog); Huntington's disease (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); euchromatin (ortholog) 14 478386 495276 - 22301074;30032202 116883874 MODEL JAAIVD010000009;XM_032885140 XP_032741031 TATA-box-binding protein protein-coding 625914885 LOC116889740 citrate synthase, mitochondrial-like 116889740 MODEL JAAIVD010000075 pseudo 625914886 LOC116904371 60S ribosomal protein L24-like 6 87072056 87072545 - 116904371 MODEL JAAIVD010000024 pseudo 625914887 Cyth1 cytohesin 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN establishment of epithelial cell polarity (ortholog); presynaptic modulation of chemical synaptic transmission (ortholog); regulation of cell adhesion (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); FOUND IN bicellular tight junction (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) 9 65806232 65887806 + 22301074 116910600 MODEL JAAIVD010000002;XM_032914528;XM_032914529 XP_032770419;XP_032770420 cytohesin-1 protein-coding 625914909 Nfkbid NFKB inhibitor delta ENCODES a protein that exhibits NF-kappaB binding (ortholog); INVOLVED IN negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of T cell differentiation in thymus (ortholog); obsolete negative regulation of NF-kappaB transcription factor activity (ortholog); ASSOCIATED WITH common variable immunodeficiency 12 (ortholog); FOUND IN nucleus (ortholog) 2 165572910 165580159 - 22301074;30032202 116892319 MODEL JAAIVD010000001;XM_032893944 XP_032749835 NF-kappa-B inhibitor delta protein-coding 625914922 LOC116904379 prothymosin alpha-like 6 91675026 91675289 - 116904379 MODEL JAAIVD010000024 pseudo 625914923 Sbsn suprabasin FOUND IN cytoplasm (ortholog) 2 165261292 165264602 - 116892299 MODEL JAAIVD010000001;XM_032893915 XP_032749806 protein-coding 625914928 LOC116901017 uncharacterized LOC116901017 5 128228331 128230323 - 116901017 MODEL JAAIVD010000023;XR_004387956 pseudo 625914932 Ipcef1 interaction protein for cytohesin exchange factors 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); lymphoid leukemia (ortholog) 2 196010904 196085102 + 116892870 MODEL JAAIVD010000001;XM_032894770;XM_032894771;XM_032894772;XM_032894774;XM_032894775 XP_032750661;XP_032750662;XP_032750663;XP_032750665;XP_032750666 interactor protein for cytohesin exchange factors 1 protein-coding 625914956 LOC116887156 uncharacterized LOC116887156 18 42884034 42886002 + 116887156 MODEL JAAIVD010000013;XM_032888703 XP_032744594 uncharacterized protein LOC116887156 protein-coding 625914961 LOC116911830 small nucleolar RNA SNORA17 10 28610996 28611127 - 116911830 MODEL JAAIVD010000005;XR_004389365 snorna 625914964 LOC116904795 U2 spliceosomal RNA 6 37226003 37226152 + 116904795 MODEL JAAIVD010000024 pseudo 625914965 LOC116895243 MTOR-associated protein MEAK7-like 3 25956088 25960743 - 116895243 MODEL JAAIVD010000012 pseudo 625914966 Nelfa negative elongation factor complex member A ENCODES a protein that exhibits chromatin binding (ortholog); molecular adaptor activity (ortholog); RNA polymerase inhibitor activity (ortholog); INVOLVED IN negative regulation of transcription elongation by RNA polymerase II (ortholog); positive regulation of protein modification process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; FOUND IN NELF complex (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 11 70922209 70946037 + 30032202 116912326 MODEL JAAIVD010000006;XM_032916362 XP_032772253 negative elongation factor A protein-coding 625914981 Ly6g5c lymphocyte antigen 6 family member G5C ENCODES a protein that exhibits identical protein binding (ortholog); FOUND IN external side of plasma membrane (ortholog); protein-containing complex (ortholog) 18 7707998 7712085 + 30032202 116887687 MODEL JAAIVD010000013;XM_032889282 XP_032745173 lymphocyte antigen 6 complex locus protein G5c protein-coding 625914988 Chka choline kinase alpha ENCODES a protein that exhibits ATP binding (ortholog); choline binding (ortholog); choline kinase activity (ortholog); INVOLVED IN cellular response to glucose starvation (ortholog); choline metabolic process (ortholog); ethanolamine metabolic process (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; ASSOCIATED WITH colon adenoma (ortholog); colon cancer (ortholog); epilepsy (ortholog); FOUND IN cytosol (ortholog); lipid droplet (ortholog) 2 3756633 3802938 - 30032202 116890803 MODEL JAAIVD010000001;XM_032891285;XM_032891286;XM_032891287;XM_032891288 XP_032747176;XP_032747177;XP_032747178;XP_032747179 protein-coding 625915013 Ldlrad2 low density lipoprotein receptor class A domain containing 2 1 20652190 20656343 + 22301074 116886606 MODEL JAAIVD010000025;XM_032888120 XP_032744011 low-density lipoprotein receptor class A domain-containing protein 2 protein-coding 625915021 Rnase12 ribonuclease A family member 12 (inactive) 12 72248678 72258914 + 22301074;30032202 116913616 MODEL JAAIVD010000007;XM_032917868 XP_032773759 probable inactive ribonuclease-like protein 12 protein-coding 625915027 Ube2a ubiquitin conjugating enzyme E2 A ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin protein ligase binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN blastocyst hatching (ortholog); chromatin remodeling (ortholog); DNA repair (ortholog); ASSOCIATED WITH genetic disease (ortholog); syndromic X-linked intellectual disability Nascimento type (ortholog); FOUND IN chromatin (ortholog); HULC complex (ortholog); XY body (ortholog) X 103055525 103065703 + 30032202 116889352 MODEL JAAIVD010000014;XM_032890462;XM_032890463 XP_032746353;XP_032746354 ubiquitin-conjugating enzyme E2 A protein-coding 625915041 LOC116909117 C-C motif chemokine 3 9 87049100 87050489 + 22301074;30032202 116909117 MODEL JAAIVD010000002;XM_032912593 XP_032768484 protein-coding 625915048 LOC116885118 small nucleolar RNA SNORA42/SNORA80 family 15 64282384 64282515 - 116885118 MODEL JAAIVD010000010;XR_004385981 snorna 625915051 Jag1 jagged canonical Notch ligand 1 ENCODES a protein that exhibits molecular adaptor activity (ortholog); Notch binding (ortholog); phospholipid binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); animal organ regeneration (ortholog); aorta morphogenesis (ortholog); PARTICIPATES IN Alagille syndrome pathway; altered Notch signaling pathway involving the main players; Notch signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Alagille syndrome (ortholog); ALAGILLE SYNDROME 1 (ortholog); FOUND IN adherens junction (ortholog); apical part of cell (ortholog); apical plasma membrane (ortholog) 5 116665740 116701378 - 22301074;30032202 116902022 MODEL JAAIVD010000023;XM_032904296 XP_032760187 protein jagged-1 protein-coding 625915081 LOC116910333 zinc finger protein 120-like 9 62165765 62173174 - 30032202 116910333 MODEL JAAIVD010000002;XM_032914192 XP_032770083 protein-coding 625915089 LOC116894392 keratin-associated protein 20-2-like 2 157140274 157140465 + 116894392 MODEL JAAIVD010000001;XM_032896099 XP_032751990 protein-coding 625915092 LOC116914835 high mobility group protein B1-like 13 34489420 34490200 + 116914835 MODEL JAAIVD010000008 pseudo 625915093 Cables1 Cdk5 and Abl enzyme substrate 1 INVOLVED IN nervous system development (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); FOUND IN cytosol (ortholog) 15 31665477 31767807 - 22301074;30032202 116884870 MODEL JAAIVD010000010;XM_032886110 XP_032742001 CDK5 and ABL1 enzyme substrate 1 protein-coding 625915107 LOC116893210 NADP-dependent malic enzyme, mitochondrial-like 2 111336569 111366969 - 22301074;30032202 116893210 MODEL JAAIVD010000001;XM_032895098 XP_032750989 protein-coding 625915119 LOC116901044 DNA (cytosine-5)-methyltransferase 3C-like 5 133024378 133053500 + 22301074;30032202 116901044 MODEL JAAIVD010000023;XM_032902625 XP_032758516 protein-coding 625915139 LOC116886759 5S ribosomal RNA 17 43164088 43164206 - 116886759 MODEL JAAIVD010000011;XR_004386160 rrna 625915142 Znf703 zinc finger protein 703 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); INVOLVED IN adherens junction assembly (ortholog); cellular response to estradiol stimulus (ortholog); mammary gland epithelial cell differentiation (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nuclear matrix (ortholog) 13 59537609 59541878 - 30032202 116914703 MODEL JAAIVD010000008;XM_032919130 XP_032775021 protein-coding 625915148 LOC116910972 transmembrane protein 64-like 10 88801843 88836852 - 116910972 MODEL JAAIVD010000005 pseudo 625915149 LOC116904359 serine/threonine-protein phosphatase 6 catalytic subunit-like 6 81736589 81766524 + 116904359 MODEL JAAIVD010000024 pseudo 625915150 LOC116906157 uncharacterized LOC116906157 7 98287261 98307745 - 116906157 MODEL JAAIVD010000026;XM_032909138 XP_032765029 uncharacterized protein LOC116906157 protein-coding 625915156 LOC116905014 AP-2 complex subunit mu-like 7 2017563 2021897 + 116905014 MODEL JAAIVD010000026 pseudo 625915157 LOC116913397 importin-5-like 12 8328865 8331118 - 116913397 MODEL JAAIVD010000007 pseudo 625915158 LOC116887774 small nucleolar RNA SNORA70 18 23767967 23768102 + 116887774 MODEL JAAIVD010000013;XR_004386271 snorna 625915161 LOC116887944 prohibitin-like X 62376347 62386124 + 116887944 MODEL JAAIVD010000014 pseudo 625915162 LOC116890274 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3-like 1 18196064 18199682 + 116890274 MODEL JAAIVD010000025 pseudo 625915163 LOC116900119 low-density lipoprotein receptor-related protein 1B-like 5 19626560 19817492 + 22301074 116900119 MODEL JAAIVD010000023;XM_032901895 XP_032757786 protein-coding 625915169 LOC116903866 nucleoside diphosphate kinase B-like 6 92716235 92716900 + 22301074;30032202 116903866 MODEL JAAIVD010000024;XM_032906614 XP_032762505 protein-coding 625915174 Fgf13 fibroblast growth factor 13 ENCODES a protein that exhibits beta-tubulin binding (ortholog); microtubule binding (ortholog); sodium channel regulator activity (ortholog); INVOLVED IN apoptotic process (ortholog); branching morphogenesis of a nerve (ortholog); cerebral cortex cell migration (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 90 (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) X 120442028 120450554 + 22301074;30032202 116889322 MODEL JAAIVD010000014;XM_032890445 XP_032746336 protein-coding 625915181 LOC116890101 olfactory receptor 10H5-like 1 232486443 232487494 - 22301074 116890101 MODEL JAAIVD010000025;XM_032890848 XP_032746739 protein-coding 625915185 Raver2 ribonucleoprotein, PTB binding 2 FOUND IN nucleus (ortholog) 1 53391748 53471990 - 22301074;30032202 116899744 MODEL JAAIVD010000025;XM_032901774 XP_032757665 ribonucleoprotein PTB-binding 2 protein-coding 625915201 Hmgb4 high mobility group box 4 1 29870073 29870751 + 30032202 116896405 MODEL JAAIVD010000025;XM_032897550 XP_032753441 high mobility group protein B4 protein-coding 625915206 Inka2 inka box actin regulator 2 ENCODES a protein that exhibits protein kinase binding (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 3 52414672 52428089 - 30032202 116896418 MODEL JAAIVD010000012;XM_032897563 XP_032753454 PAK4-inhibitor INKA2 protein-coding 625915212 LOC116914047 40S ribosomal protein S20-like 12 63019139 63019525 + 116914047 MODEL JAAIVD010000007 pseudo 625915213 LOC116897631 U1 spliceosomal RNA 3 125424586 125424733 - 116897631 MODEL JAAIVD010000012 pseudo 625915214 Adam33 ADAM metallopeptidase domain 33 ASSOCIATED WITH asthma (ortholog); Breast Neoplasms (ortholog); Bronchial Hyperreactivity (ortholog) 5 110787667 110799663 - 22301074 116900637 MODEL JAAIVD010000023;XM_032902349 XP_032758240 disintegrin and metalloproteinase domain-containing protein 33 protein-coding 625915238 C3H4orf33 chromosome 3 C4orf33 homolog 3 112184140 112193401 - 116896901 MODEL JAAIVD010000012;XM_032898448;XM_032898449 XP_032754339;XP_032754340 UPF0462 protein C4orf33 homolog protein-coding 625915247 LOC116887840 ferritin light chain 1-like X 38897526 38955157 - 116887840 MODEL JAAIVD010000014 pseudo 625915248 Prom2 prominin 2 ENCODES a protein that exhibits cholesterol binding (ortholog); INVOLVED IN negative regulation of caveolin-mediated endocytosis (ortholog); negative regulation of pinocytosis (ortholog); positive regulation of cell projection organization (ortholog); FOUND IN cell surface (ortholog); cilium (ortholog); cytoplasmic vesicle (ortholog) 5 106312012 106324893 - 30032202 116900621 MODEL JAAIVD010000023;XM_032902340 XP_032758231 prominin-2 protein-coding 625915276 LOC116889612 histone demethylase UTY-like Y 2054813 2086528 + 22301074;30032202 116889612 MODEL JAAIVD010000015;XM_032890539;XM_032890540 XP_032746430;XP_032746431 protein-coding 625915287 LOC116906954 putative olfactory receptor 8G3 pseudogene 8 82734819 82735742 + 22301074;30032202 116906954 MODEL JAAIVD010000027;XM_032909875 XP_032765766 protein-coding 625915290 LOC116898181 glyceraldehyde-3-phosphate dehydrogenase-like 4 130932553 130933505 + 116898181 MODEL JAAIVD010000003 pseudo 625915291 Pdgfrb platelet derived growth factor receptor beta ENCODES a protein that exhibits enzyme binding (ortholog); GTPase activator activity (ortholog); kinase activity (ortholog); INVOLVED IN adrenal gland development (ortholog); aorta morphogenesis (ortholog); blood vessel development (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH atherosclerosis (ortholog); autism spectrum disorder (ortholog); basal ganglia calcification (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); cytoplasm (ortholog) 15 70862900 70910247 - 22301074;30032202 116884436 MODEL JAAIVD010000010;XM_032885524;XM_032885525 XP_032741415;XP_032741416 platelet-derived growth factor receptor beta protein-coding 625915322 Zfp42 ZFP42 zinc finger protein ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); female gonad development (ortholog); gene expression (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) 13 44697047 44698147 - 30032202 116914655 MODEL JAAIVD010000008;XM_032919056 XP_032774947 zinc finger protein 42 homolog protein-coding 625915327 LOC116885862 uncharacterized LOC116885862 16 7613403 7617929 + 116885862 MODEL JAAIVD010000004 pseudo 625915328 Plod3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 ENCODES a protein that exhibits iron ion binding (ortholog); metal ion binding (ortholog); procollagen galactosyltransferase activity (ortholog); INVOLVED IN basement membrane assembly (ortholog); cellular response to hormone stimulus (ortholog); collagen biosynthetic process (ortholog); ASSOCIATED WITH BCARD syndrome (ortholog); Cerebral Hemorrhage (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) 16 17022333 17032922 - 22301074;30032202 116885440 MODEL JAAIVD010000004;XM_032886723 XP_032742614 multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3 protein-coding 625915351 LOC116894769 cysteine protease ATG4B-like 2 214833045 214838331 + 116894769 MODEL JAAIVD010000001 pseudo 625915352 Ephb2 EPH receptor B2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); axon guidance receptor activity (ortholog); ephrin receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); animal organ morphogenesis (ortholog); axon guidance (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; syndecan signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Anorectal Malformations (ortholog); Candidemia (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); dendrite (ortholog) 1 21393144 21575100 + 22301074;30032202 116894228 MODEL JAAIVD010000025;XM_032895938;XM_032895942;XM_032895949;XM_032895957 XP_032751829;XP_032751833;XP_032751840;XP_032751848 ephrin type-B receptor 2 protein-coding 625915380 LOC116883577 urinary protein 3-like 14 42206593 42210174 + 116883577 MODEL JAAIVD010000009;XM_032884758 XP_032740649 protein-coding 625915388 LOC116897763 5'-AMP-activated protein kinase catalytic subunit alpha-1-like 4 7773157 7776007 + 116897763 MODEL JAAIVD010000003 pseudo 625915389 LOC116893698 olfactory receptor 5B3-like 2 13079437 13080363 + 22301074;30032202 116893698 MODEL JAAIVD010000001;XM_032895415 XP_032751306 protein-coding 625915393 LOC116900670 zinc finger protein 431-like 5 128304956 128305500 - 22301074 116900670 MODEL JAAIVD010000023;XM_032902374 XP_032758265 protein-coding 625915397 LOC116912967 small Cajal body-specific RNA 23 11 4890611 4890737 - 116912967 MODEL JAAIVD010000006;XR_004389533 ncrna 625915400 LOC116889738 uncharacterized 16.1 kDa HIT-like protein 22301074;30032202 116889738 MODEL JAAIVD010000072;XM_032890610 XP_032746501 protein-coding 625915401 Sde2 spliceosome associated SDE2 ENCODES a protein that exhibits damaged DNA binding (ortholog); snoRNA binding (ortholog); INVOLVED IN cellular response to UV (ortholog); endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); mitotic G1 DNA damage checkpoint signaling (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 10 59168214 59183388 + 30032202 116911253 MODEL JAAIVD010000005;XM_032915153 XP_032771044 SDE2 telomere maintenance homolog;replication stress response regulator SDE2 protein-coding 625915412 LOC116906967 zinc finger protein 883-like 1 157855916 157869939 - 30032202 116906967 MODEL JAAIVD010000025;XM_032909891;XM_032909897;XM_032909905 XP_032765782;XP_032765788;XP_032765796 protein-coding 625915425 LOC116896283 heat shock cognate 71 kDa protein-like 3 34056487 34058496 + 116896283 MODEL JAAIVD010000012 pseudo 625915426 LOC116887856 high mobility group protein B4-like X 44039389 44040210 + 30032202 116887856 MODEL JAAIVD010000014;XM_032889358 XP_032745249 protein-coding 625915430 LOC116899967 40S ribosomal protein S11-like 5 106991452 107001871 - 116899967 MODEL JAAIVD010000023 pseudo 625915431 Crlf3 cytokine receptor like factor 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of G1/S transition of mitotic cell cycle (ortholog); positive regulation of DNA-templated transcription (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 9 90350690 90386914 + 22301074 116909169 MODEL JAAIVD010000002;XM_032912659;XM_032912660 XP_032768550;XP_032768551 cytokine receptor-like factor 3 protein-coding 625915445 LOC116898558 putative sperm motility kinase W 4 154880910 154882381 + 22301074;30032202 116898558 MODEL JAAIVD010000003;XM_032899766 XP_032755657 protein-coding 625915448 Cdc16 cell division cycle 16 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); FOUND IN anaphase-promoting complex (ortholog); centrosome (ortholog); cytoplasm (ortholog) 13 69942679 69965620 - 22301074;30032202 116914462 MODEL JAAIVD010000008;XM_032918763 XP_032774654 cell division cycle protein 16 homolog protein-coding 625915471 Mad2l1 mitotic arrest deficient 2 like 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN mitotic sister chromatid segregation (ortholog); mitotic spindle assembly checkpoint signaling (ortholog); negative regulation of mitotic cell cycle (ortholog); ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); polycystic ovary syndrome (ortholog); FOUND IN chromosome (ortholog); chromosome, centromeric region (ortholog); cytoplasm (ortholog) 6 76338307 76349934 + 30032202 116903700 MODEL JAAIVD010000024;XM_032906374;XM_032906375;XM_032906376 XP_032762265;XP_032762266;XP_032762267 mitotic spindle assembly checkpoint protein MAD2A protein-coding 625915486 Traf2 TNF receptor associated factor 2 ENCODES a protein that exhibits CD40 receptor binding (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); CD27 signaling pathway (ortholog); CD40 signaling pathway (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; ceramide signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH Transplant Rejection (ortholog); FOUND IN CD40 receptor complex (ortholog); cell cortex (ortholog); cytoplasm (ortholog) 5 11631318 11656299 + 22301074;30032202 116901292 MODEL JAAIVD010000023;XM_032903082;XM_032903083;XM_032903084;XM_032903085 XP_032758973;XP_032758974;XP_032758975;XP_032758976 TNF receptor-associated factor 2 protein-coding 625915510 LOC116910290 NACHT, LRR and PYD domains-containing protein 1a-like 9 44394317 44432552 + 30032202 116910290 MODEL JAAIVD010000002;XM_032914164 XP_032770055 protein-coding 625915519 LOC116915124 small nucleolar RNA SNORA17 13 68604123 68604249 + 116915124 MODEL JAAIVD010000008;XR_004389805 snorna 625915522 Mipol1 mirror-image polydactyly 1 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH polydactyly (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) 7 70602903 70895282 + 116905070 MODEL JAAIVD010000026;XM_032907776 XP_032763667 mirror-image polydactyly gene 1 protein protein-coding 625915537 Gapt GRB2 binding adaptor protein, transmembrane INVOLVED IN B cell homeostasis (ortholog); B cell proliferation involved in immune response (ortholog); FOUND IN plasma membrane (ortholog) 3 186672746 186674931 + 22301074;30032202 116895660 MODEL JAAIVD010000012;XM_032896866 XP_032752757 protein GAPT protein-coding 625915543 Mrpl47 mitochondrial ribosomal protein L47 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 3 122264425 122275728 + 22301074;30032202 116896961 MODEL JAAIVD010000012;XM_032898539 XP_032754430 39S ribosomal protein L47, mitochondrial protein-coding 625915554 LOC116907002 zinc finger CCCH domain-containing protein 15-like 8 49073497 49074884 - 116907002 MODEL JAAIVD010000027 pseudo 625915555 LOC116893332 kallikrein-2-like 2 155434875 155440330 - 116893332 MODEL JAAIVD010000001 pseudo 625915556 Lmcd1 LIM and cysteine rich domains 1 ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of calcineurin-NFAT signaling cascade (ortholog); regulation of cardiac muscle hypertrophy (ortholog); ASSOCIATED WITH coronary stenosis (ortholog); mitral valve insufficiency (ortholog); mitral valve prolapse (ortholog); FOUND IN nucleus (ortholog) 6 34184905 34243858 - 22301074 116904642 MODEL JAAIVD010000024;XM_032907435 XP_032763326 LIM and cysteine-rich domains protein 1 protein-coding 625915566 Efr3b EFR3 homolog B INVOLVED IN phosphatidylinositol phosphate biosynthetic process (ortholog); protein localization to plasma membrane (ortholog); social behavior (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) 7 24633124 24703579 - 30032202 116906020 MODEL JAAIVD010000026;XM_032909070;XM_032909071;XM_032909073 XP_032764961;XP_032764962;XP_032764964 protein EFR3 homolog B protein-coding 625915600 Ltb4r leukotriene B4 receptor ENCODES a protein that exhibits leukotriene receptor activity (ortholog); PARTICIPATES IN G protein mediated signaling pathway; ASSOCIATED WITH Anaphylaxis (ortholog); arteriosclerosis (ortholog); carotid artery disease (ortholog) 12 69236319 69237384 - 22301074;30032202 116914016 MODEL JAAIVD010000007;XM_032918287 XP_032774178 leukotriene B4 receptor 1 protein-coding 625915604 Gpnmb glycoprotein nmb ENCODES a protein that exhibits heparin binding (ortholog); integrin binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN bone mineralization (ortholog); cell adhesion (ortholog); cell-cell signaling (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); Acute Lung Injury (ortholog); FOUND IN cytoplasmic vesicle (ortholog); membrane (ortholog); plasma membrane (ortholog) 6 91921395 91944738 - 30032202 116903839 MODEL JAAIVD010000024;XM_032906555 XP_032762446 transmembrane glycoprotein NMB protein-coding 625915619 LOC116900485 olfactory receptor 140 5 71657748 71658656 - 22301074 116900485 MODEL JAAIVD010000023;XM_032902219 XP_032758110 protein-coding 625915622 LOC116893103 PWWP domain-containing DNA repair factor 3A-like 2 63154260 63155999 - 116893103 MODEL JAAIVD010000001 pseudo 625915623 LOC116894586 60S ribosomal protein L7a-like 2 180418131 180418942 - 116894586 MODEL JAAIVD010000001 pseudo 625915624 LOC116885021 ubiquitin-60S ribosomal protein L40-like 15 12162199 12162677 + 22301074;30032202 116885021 MODEL JAAIVD010000010;XM_032886263 XP_032742154 protein-coding 625915629 LOC116885283 uncharacterized protein C11orf98 homolog 16 2290552 2290957 + 116885283 MODEL JAAIVD010000004 pseudo 625915630 LOC116899978 zinc finger FYVE domain-containing protein 21-like 5 133875551 133877001 - 116899978 MODEL JAAIVD010000023 pseudo 625915631 Gar1 GAR1 ribonucleoprotein ENCODES a protein that exhibits box H/ACA snoRNA binding (ortholog); RNA binding (ortholog); telomerase RNA binding (ortholog); INVOLVED IN snoRNA guided rRNA pseudouridine synthesis (ortholog); telomere maintenance via telomerase (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Animal Disease Models (ortholog); dyskeratosis congenita (ortholog); hematopoietic system disease (ortholog); FOUND IN box H/ACA snoRNP complex (ortholog); box H/ACA telomerase RNP complex (ortholog); chromosome, telomeric region (ortholog) 3 29472720 29479302 + 22301074;30032202 116896263 MODEL JAAIVD010000012;XM_032897339;XM_032897340 XP_032753230;XP_032753231 H/ACA ribonucleoprotein complex subunit 1 protein-coding 625915645 Agpat3 1-acylglycerol-3-phosphate O-acyltransferase 3 ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); lysophosphatidic acid acyltransferase activity (ortholog); ASSOCIATED WITH intellectual disability (ortholog); neurodegenerative disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); nuclear envelope (ortholog) 18 1547035 1631082 - 30032202 116886862 MODEL JAAIVD010000013;XM_032888315;XM_032888316 XP_032744206;XP_032744207 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma protein-coding 625915662 Rbm26 RNA binding motif protein 26 ASSOCIATED WITH anthracosis (ortholog) 12 19651416 19732381 + 22301074;30032202 116913620 MODEL JAAIVD010000007;XM_032917874;XM_032917875;XM_032917876;XM_032917877;XM_032917878;XM_032917879 XP_032773765;XP_032773766;XP_032773767;XP_032773768;XP_032773769;XP_032773770 RNA-binding protein 26 protein-coding 625915698 LOC116899865 small nucleolar RNA SNORA17 4 141245932 141246057 + 116899865 MODEL JAAIVD010000003;XR_004387859 snorna 625915701 LOC116909245 uncharacterized LOC116909245 9 14658626 14659822 - 116909245 MODEL JAAIVD010000002;XR_004389061 ncrna 625915705 Trmt44 tRNA methyltransferase 44 homolog 11 69503214 69521403 + 22301074;30032202 116912415 MODEL JAAIVD010000006;XM_032916481 XP_032772372 probable tRNA (uracil-O(2)-)-methyltransferase protein-coding 625915720 LOC116899965 ribosome biogenesis protein WDR12-like 5 91541370 91543765 + 116899965 MODEL JAAIVD010000023 pseudo 625915721 LOC116890304 U4 spliceosomal RNA 1 146536478 146536610 + 116890304 MODEL JAAIVD010000025 pseudo 625915722 Parg poly(ADP-ribose) glycohydrolase ENCODES a protein that exhibits chromatin binding (ortholog); poly(ADP-ribose) glycohydrolase activity (ortholog); INVOLVED IN ATP generation from poly-ADP-D-ribose (ortholog); detection of bacterium (ortholog); DNA damage response (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; ASSOCIATED WITH borna disease (ortholog); brain infarction (ortholog); Embryo Loss (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); nuclear body (ortholog) 13 7892380 8003750 + 22301074;30032202 116914405 MODEL JAAIVD010000008;XM_032918643;XM_032918644;XM_032918645 XP_032774534;XP_032774535;XP_032774536 protein-coding 625915750 Mlph melanophilin ENCODES a protein that exhibits actin binding (ortholog); microtubule plus-end binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN melanocyte differentiation (ortholog); melanosome localization (ortholog); pigmentation (ortholog); ASSOCIATED WITH alopecia (ortholog); genetic disease (ortholog); Griscelli syndrome type 3 (ortholog); FOUND IN actin cytoskeleton (ortholog); cortical actin cytoskeleton (ortholog); dendrite (ortholog) 4 162919614 162953907 + 22301074;30032202 116899631 MODEL JAAIVD010000003;XM_032901604 XP_032757495 protein-coding 625915770 LOC116915127 small nucleolar RNA SNORA17 13 63139912 63140047 + 116915127 MODEL JAAIVD010000008;XR_004389807 snorna 625915773 LOC116900484 olfactory receptor 4X2-like 5 71649570 71650499 + 116900484 MODEL JAAIVD010000023 pseudo 625915774 Spink8 serine peptidase inhibitor Kazal type 8 (putative) 8 100439169 100450552 + 22301074 116907476 MODEL JAAIVD010000027;XM_032910462 XP_032766353 serine protease inhibitor Kazal-type 8 protein-coding 625915784 LOC116893598 uncharacterized LOC116893598 2 3384775 3387376 - 116893598 MODEL JAAIVD010000001;XR_004386998 ncrna 625915788 LOC116893102 scavenger receptor cysteine-rich domain-containing protein SCART1-like 2 61633487 61635951 - 116893102 MODEL JAAIVD010000001 pseudo 625915789 Cdh9 cadherin 9 ENCODES a protein that exhibits cadherin binding involved in cell-cell adhesion (ortholog); identical protein binding (ortholog); INVOLVED IN synapse assembly (ortholog); synaptic membrane adhesion (ortholog); ASSOCIATED WITH autistic disorder (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) 3 164928194 165065318 - 22301074;30032202 116897112 MODEL JAAIVD010000012;XM_032898754 XP_032754645 cadherin-9 protein-coding 625915805 Popdc3 popeye domain cAMP effector 3 ENCODES a protein that exhibits cAMP binding (ortholog); INVOLVED IN regulation of membrane potential (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 26 (ortholog); FOUND IN membrane (ortholog) 3 219173054 219201142 + 30032202 116895713 MODEL JAAIVD010000012;XM_032896900;XM_032896901 XP_032752791;XP_032752792 popeye domain containing 3;popeye domain-containing protein 3 protein-coding 625915817 Cd96 CD96 molecule INVOLVED IN cell-matrix adhesion (ortholog); negative regulation of natural killer cell cytokine production (ortholog); negative regulation of type II interferon production (ortholog); ASSOCIATED WITH C syndrome (ortholog); multiple sclerosis (ortholog); FOUND IN cytoplasm (ortholog) 4 30765863 30838968 - 30032202 116897890 MODEL JAAIVD010000003;XM_032899296 XP_032755187 T-cell surface protein tactile protein-coding 625915836 Pdap1 PDGFA associated protein 1 ASSOCIATED WITH high grade glioma (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) 16 8155584 8166098 + 30032202 116885663 MODEL JAAIVD010000004;XM_032886970 XP_032742861 28 kDa heat- and acid-stable phosphoprotein protein-coding 625915846 LOC116890015 tubulin alpha-1B chain-like 1 191217896 191219359 + 116890015 MODEL JAAIVD010000025 pseudo 625915847 LOC116897556 small nucleolar RNA SNORA17 3 115970600 115970731 + 116897556 MODEL JAAIVD010000012;XR_004387569 snorna 625915850 Calcoco2 calcium binding and coiled-coil domain 2 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN positive regulation of autophagosome maturation (ortholog); response to type II interferon (ortholog); xenophagy (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN autophagosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 58262523 58280342 + 30032202 116910324 MODEL JAAIVD010000002;XM_032914185 XP_032770076 calcium-binding and coiled-coil domain-containing protein 2 protein-coding 625915859 Serpind1 serpin family D member 1 ASSOCIATED WITH carotid artery thrombosis (ortholog); disease by infectious agent (ortholog); heparin cofactor II deficiency (ortholog) 4 2600385 2607140 + 22301074;30032202 116898636 MODEL JAAIVD010000003;XM_032899856 XP_032755747 heparin cofactor 2 protein-coding 625915867 Scn4a sodium voltage-gated channel alpha subunit 4 ENCODES a protein that exhibits voltage-gated sodium channel activity (ortholog); INVOLVED IN choline transport (ortholog); monoatomic cation transport (ortholog); potassium ion transport (ortholog); ASSOCIATED WITH congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 16 (ortholog); congenital myopathy (ortholog); FOUND IN plasma membrane (ortholog); voltage-gated sodium channel complex (ortholog) 9 72774024 72805559 + 22301074;30032202 116908750 MODEL JAAIVD010000002;XM_032912103 XP_032767994 sodium channel protein type 4 subunit alpha protein-coding 625915894 Pkp2 plakophilin 2 ENCODES a protein that exhibits alpha-catenin binding (ortholog); DNA binding (ortholog); intermediate filament binding (ortholog); INVOLVED IN adherens junction maintenance (ortholog); bundle of His cell-Purkinje myocyte adhesion involved in cell communication (ortholog); cardiac muscle cell action potential (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); arrhythmogenic right ventricular dysplasia 1 (ortholog); FOUND IN adherens junction (ortholog); cell junction (ortholog); cell-cell junction (ortholog) 4 1477735 1548364 + 30032202 116898611 MODEL JAAIVD010000003;XM_032899809 XP_032755700 plakophilin-2 protein-coding 625915911 Nup214 nucleoporin 214 ENCODES a protein that exhibits nuclear export signal receptor activity (ortholog); nuclear localization sequence binding (ortholog); structural constituent of nuclear pore (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); protein export from nucleus (ortholog); protein import into nucleus (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; mRNA nuclear export pathway; NXF1-NXT1 export pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); brain disease (ortholog); FOUND IN cytoplasmic side of nuclear pore (ortholog); nuclear envelope (ortholog) 5 3581444 3666070 - 22301074;30032202 116901159 MODEL JAAIVD010000023;XM_032902802;XM_032902803 XP_032758693;XP_032758694 nuclear pore complex protein Nup214 protein-coding 625915955 Nop58 NOP58 ribonucleoprotein ENCODES a protein that exhibits ATPase binding (ortholog); snoRNA binding (ortholog); TFIID-class transcription factor complex binding (ortholog); INVOLVED IN ribosomal small subunit biogenesis (ortholog); snoRNA localization (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); FOUND IN box C/D methylation guide snoRNP complex (ortholog); Cajal body (ortholog); fibrillar center (ortholog) 5 6633122 6657868 - 30032202 116901201 MODEL JAAIVD010000023;XM_032902907;XM_032902908;XM_032902909 XP_032758798;XP_032758799;XP_032758800 nucleolar protein 58 protein-coding 625915982 LOC116893580 negative elongation factor D-like 2 226647098 226648599 - 116893580 MODEL JAAIVD010000001 pseudo 625915983 LOC116896074 AT-rich interactive domain-containing protein 4A-like 3 210741065 210742150 - 30032202 116896074 MODEL JAAIVD010000012;XM_032897056 XP_032752947 protein-coding 625915986 LOC116889760 kynurenine--oxoglutarate transaminase 1, mitochondrial 22301074;30032202;7796908 116889760 MODEL JAAIVD010000081;XM_032890622;Z49696 CAA89696;XP_032746513 kynurenine aminotransferase/glutamine transaminase K protein-coding 625915987 LOC116895737 proteasome subunit beta type-7-like 3 29832660 29876298 - 116895737 MODEL JAAIVD010000012 pseudo 625915988 LOC116902723 gliadoralin-A 6 16400689 16403602 - 116902723 MODEL JAAIVD010000024;XM_032905073;XM_032905074 XP_032760964;XP_032760965 protein-coding 625915998 LOC116911574 translationally-controlled tumor protein-like 10 13554232 13554674 - 116911574 MODEL JAAIVD010000005 pseudo 625915999 LOC116887540 uncharacterized LOC116887540 18 5336599 5337733 - 116887540 MODEL JAAIVD010000013;XM_032889171 XP_032745062 uncharacterized protein LOC116887540 protein-coding 625916004 Apbb2 amyloid beta precursor protein binding family B member 2 INVOLVED IN axon guidance (ortholog); extracellular matrix organization (ortholog); maintenance of lens transparency (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); cognitive disorder (ortholog); Weight Gain (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); endoplasmic reticulum (ortholog) 11 23421459 23739035 - 30032202 116912894 MODEL JAAIVD010000006;XM_032917153 XP_032773044 amyloid-beta A4 precursor protein-binding family B member 2 protein-coding 625916026 LOC116902746 uncharacterized LOC116902746 6 61075372 61092187 + 116902746 MODEL JAAIVD010000024;XR_004388235 ncrna 625916033 LOC116890137 cytochrome P450 11B3, mitochondrial 1 247618031 247624422 - 22301074;30032202 116890137 MODEL JAAIVD010000025;XM_032890873;XM_032890874 XP_032746764;XP_032746765 protein-coding 625916048 LOC116907658 60S ribosomal protein L13-like 8 100755369 100756335 + 116907658 MODEL JAAIVD010000027 pseudo 625916049 LOC116907434 olfactory receptor 18-like 8 15407871 15408824 + 22301074;30032202 116907434 MODEL JAAIVD010000027;XM_032910404 XP_032766295 protein-coding 625916053 LOC116900015 40S ribosomal protein S2-like 5 11058931 11060351 - 116900015 MODEL JAAIVD010000023 pseudo 625916054 Ech1 enoyl-CoA hydratase 1 ASSOCIATED WITH glucose intolerance (ortholog); Insulin Resistance (ortholog); metabolic dysfunction-associated steatotic liver disease (ortholog); FOUND IN mitochondrion (ortholog) 2 167170420 167177304 - 30032202 116892374 MODEL JAAIVD010000001;XM_032894037 XP_032749928 delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial protein-coding 625916066 Tbcb tubulin folding cofactor B ASSOCIATED WITH Neoplasm Metastasis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 2 165777056 165782900 + 22301074;30032202 116892329 MODEL JAAIVD010000001;XM_032893957 XP_032749848 tubulin-folding cofactor B protein-coding 625916076 Cpo carboxypeptidase O ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); FOUND IN plasma membrane (ortholog) 4 137836279 137853007 + 22301074;30032202 116898522 MODEL JAAIVD010000003;XM_032899746 XP_032755637 protein-coding 625916087 Tmem176a transmembrane protein 176A INVOLVED IN negative regulation of dendritic cell differentiation (ortholog); ASSOCIATED WITH long QT syndrome (ortholog) 6 92148064 92151832 - 22301074;30032202 116903844 MODEL JAAIVD010000024;XM_032906570 XP_032762461 protein-coding 625916098 E2f3 E2F transcription factor 3 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN G1/S transition of mitotic cell cycle (ortholog); negative regulation of fat cell proliferation (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH high grade glioma (ortholog); lung adenocarcinoma (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) 14 48953675 49027254 - 22301074;30032202 116883324 MODEL JAAIVD010000009;XM_032884393;XM_032884394;XM_032884395 XP_032740284;XP_032740285;XP_032740286 transcription factor E2F3 protein-coding 625916116 Rcn2 reticulocalbin 2 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum (ortholog) 8 49966321 49983036 + 22301074;30032202 116906902 MODEL JAAIVD010000027;XM_032909815 XP_032765706 reticulocalbin-2 protein-coding 625916127 LOC116901004 arginine/serine-rich protein 1-like 5 110079803 110080381 - 116901004 MODEL JAAIVD010000023 pseudo 625916128 Tmem198 transmembrane protein 198 INVOLVED IN positive regulation of canonical Wnt signaling pathway (ortholog); FOUND IN cytoplasmic vesicle (ortholog); plasma membrane (ortholog) 4 148829731 148835930 + 30032202 116899538 MODEL JAAIVD010000003;XM_032901416;XM_032901417 XP_032757307;XP_032757308 protein-coding 625916140 LOC116908505 60S ribosomal protein L6-like 1 175248704 175250511 + 116908505 MODEL JAAIVD010000025 pseudo 625916141 Tnnt1 troponin T1, slow skeletal type ENCODES a protein that exhibits tropomyosin binding (ortholog); troponin T binding (ortholog); INVOLVED IN negative regulation of muscle contraction (ortholog); skeletal muscle contraction (ortholog); slow-twitch skeletal muscle fiber contraction (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH dilated cardiomyopathy (ortholog); genetic disease (ortholog); myopathy (ortholog); FOUND IN troponin complex (ortholog) 2 177107609 177118535 - 22301074;30032202 116894539 MODEL JAAIVD010000001;XM_032896244;XM_032896245;XM_032896246;XM_032896247 XP_032752135;XP_032752136;XP_032752137;XP_032752138 troponin T, slow skeletal muscle protein-coding 625916170 Nlrc5 NLR family CARD domain containing 5 ENCODES a protein that exhibits RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN innate immune response (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of type I interferon-mediated signaling pathway (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); metabolic dysfunction and alcohol associated liver disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 17 1340776 1421031 + 22301074 116886580 MODEL JAAIVD010000011;XM_032888107 XP_032743998 protein NLRC5 protein-coding 625916223 LOC116910960 putative glutathione-specific gamma-glutamylcyclotransferase 2 10 83656832 83668989 - 116910960 MODEL JAAIVD010000005 pseudo 625916224 Iqcm IQ motif containing M 17 22948917 23314338 + 116886653 MODEL JAAIVD010000011;XM_032888149 XP_032744040 IQ domain-containing protein M protein-coding 625916242 Krt18 keratin 18 ENCODES a protein that exhibits scaffold protein binding (ortholog); INVOLVED IN cholangiocyte apoptotic process (ortholog); extrinsic apoptotic signaling pathway (ortholog); Golgi to plasma membrane protein transport (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); Breast Neoplasms (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cell periphery (ortholog); centriolar satellite (ortholog); cytoplasm (ortholog) 1 261045271 261048998 - 22301074;30032202 116883635 MODEL JAAIVD010000025;XM_032884827 XP_032740718 keratin, type I cytoskeletal 18 protein-coding 625916253 C5H20orf96 chromosome 5 C20orf96 homolog 5 131742029 131759720 + 116901042 MODEL JAAIVD010000023;XM_032902623 XP_032758514 uncharacterized protein C20orf96 homolog protein-coding 625916267 LOC116905580 ribosome biogenesis regulatory protein homolog 7 406071 408515 - 116905580 MODEL JAAIVD010000026 pseudo 625916268 LOC116883872 spermatogenesis-associated protein 1-like 1 207543349 207563539 - 116883872 MODEL JAAIVD010000025;XM_032885167 XP_032741058 protein-coding 625916278 LOC116910900 dimethylaniline monooxygenase [N-oxide-forming] 5-like 10 45615729 45634383 - 22301074;30032202 116910900 MODEL JAAIVD010000005;XM_032914666 XP_032770557 protein-coding 625916289 Pik3c2b phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta ENCODES a protein that exhibits 1-phosphatidylinositol-3-kinase activity (ortholog); 1-phosphatidylinositol-4-phosphate 3-kinase activity (ortholog); lipid kinase activity (ortholog); INVOLVED IN autophagosome organization (ortholog); cellular response to starvation (ortholog); macroautophagy (ortholog); ASSOCIATED WITH Neoplasm Metastasis (ortholog); FOUND IN cytosol (ortholog); endocytic vesicle (ortholog); plasma membrane (ortholog) 10 2737311 2776931 - 22301074;30032202 116910869 MODEL JAAIVD010000005;XM_032914629 XP_032770520 phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta protein-coding 625916324 Nrf1 nuclear respiratory factor 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); mitochondrion organization (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Bowen's Disease (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN nucleoplasm (ortholog) 6 109405485 109508134 - 30032202 116904005 MODEL JAAIVD010000024;XM_032906816;XM_032906817;XM_032906818;XM_032906819;XM_032906820 XP_032762707;XP_032762708;XP_032762709;XP_032762710;XP_032762711 protein-coding 625916348 LOC116902808 putative vomeronasal receptor-like protein 4 6 83784436 83785347 + 22301074;30032202 116902808 MODEL JAAIVD010000024;XM_032905141 XP_032761032 protein-coding 625916351 Jak3 Janus kinase 3 ENCODES a protein that exhibits protein phosphatase binding (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN B cell differentiation (ortholog); cellular response to cytokine stimulus (ortholog); cytokine-mediated signaling pathway (ortholog); PARTICIPATES IN altered Jak-Stat signaling pathway; interleukin-2 signaling pathway; interleukin-4 signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); acute megakaryocytic leukemia (ortholog); adenosine deaminase deficiency (ortholog); FOUND IN extrinsic component of cytoplasmic side of plasma membrane (ortholog) 13 13277803 13290206 - 22301074;30032202 116914270 MODEL JAAIVD010000008;XM_032918492 XP_032774383 tyrosine-protein kinase JAK3 protein-coding 625916379 Rbm12 RNA binding motif protein 12 ASSOCIATED WITH psychotic disorder (ortholog); schizophrenia 19 (ortholog); FOUND IN nucleoplasm (ortholog) 5 135457432 135474801 - 22301074;30032202 116902195 MODEL JAAIVD010000023;XM_032904561 XP_032760452 RNA-binding protein 12 protein-coding 625916386 LOC116898355 KAT8 regulatory NSL complex subunit 2-like 4 55323353 55324675 - 116898355 MODEL JAAIVD010000003 pseudo 625916387 LOC116895992 dipeptidyl peptidase 3-like 3 166767016 166792221 - 116895992 MODEL JAAIVD010000012 pseudo 625916388 LOC116915152 small nucleolar RNA SNORD19B 13 6715363 6715442 - 116915152 MODEL JAAIVD010000008;XR_004389820 snorna 625916391 Six4 SIX homeobox 4 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN embryonic cranial skeleton morphogenesis (ortholog); embryonic skeletal system morphogenesis (ortholog); fungiform papilla morphogenesis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 7 87368527 87378098 - 22301074;30032202 116905769 MODEL JAAIVD010000026;XM_032908737 XP_032764628 homeobox protein SIX4 protein-coding 625916397 LOC116912721 transmembrane emp24 domain-containing protein 11 11 18555200 18580675 - 30032202 116912721 MODEL JAAIVD010000006;XM_032916854 XP_032772745 protein-coding 625916404 Tbpl2 TATA-box binding protein like 2 ENCODES a protein that exhibits DNA binding (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 5 33770124 33791505 - 22301074;30032202 116900177 MODEL JAAIVD010000023;XM_032901933 XP_032757824 TATA box-binding protein-like protein 2 protein-coding 625916414 LOC116884909 protocadherin alpha-5-like 15 7407733 7410310 - 22301074 116884909 MODEL JAAIVD010000010;XM_032886131 XP_032742022 protein-coding 625916418 Glra3 glycine receptor alpha 3 ENCODES a protein that exhibits extracellularly glycine-gated chloride channel activity (ortholog); glycine-gated chloride ion channel activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to ethanol (ortholog); cellular response to zinc ion (ortholog); ASSOCIATED WITH ovarian carcinoma (ortholog); FOUND IN dendrite (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) 13 32365513 32616856 + 22301074;30032202 116914493 MODEL JAAIVD010000008;XM_032918805;XM_032918806 XP_032774696;XP_032774697 glycine receptor subunit alpha-3 protein-coding 625916437 LOC116904676 small nucleolar RNA SNORA3/SNORA45 family 6 130465012 130465133 - 116904676 MODEL JAAIVD010000024;XR_004388373 snorna 625916440 Rundc1 RUN domain containing 1 INVOLVED IN in utero embryonic development (ortholog); ASSOCIATED WITH prostate cancer (ortholog) 9 60719234 60729211 + 116908579 MODEL JAAIVD010000002;XM_032911790;XM_032911791;XM_032911792;XM_032911793 XP_032767681;XP_032767682;XP_032767683;XP_032767684 RUN domain-containing protein 1 protein-coding 625916454 LOC116889523 small nucleolar RNA SNORA17 X 78552208 78552333 + 116889523 MODEL JAAIVD010000014;XR_004386465 snorna 625916457 Spaca1 sperm acrosome associated 1 INVOLVED IN acrosome assembly (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH spermatogenic failure 85 (ortholog); FOUND IN acrosomal membrane (ortholog); acrosomal vesicle (ortholog) 1 108686595 108701789 + 22301074;30032202 116888883 MODEL JAAIVD010000025;XM_032890147;XM_032890154 XP_032746038;XP_032746045 sperm acrosome membrane-associated protein 1 protein-coding 625916470 LOC116888368 high mobility group protein B4-like X 108229796 108230301 + 30032202 116888368 MODEL JAAIVD010000014;XM_032889636 XP_032745527 protein-coding 625916473 Slc25a26 solute carrier family 25 member 26 ENCODES a protein that exhibits S-adenosyl-L-methionine transmembrane transporter activity (ortholog); S-adenosyl-L-methionine:S-adenosyl-L-homocysteine antiporter activity (ortholog); INVOLVED IN macromolecule methylation (ortholog); mitochondrial S-adenosyl-L-methionine transmembrane transport (ortholog); S-adenosyl-L-methionine transport (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 28 (ortholog); genetic disease (ortholog); Hypokalemic Periodic Paralysis, Type 1 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 6 52363782 52458825 - 30032202 116904308 MODEL JAAIVD010000024;XM_032907224 XP_032763115 S-adenosylmethionine mitochondrial carrier protein protein-coding 625916486 LOC116898462 heat shock protein HSP 90-beta-like 4 103666511 103668152 + 116898462 MODEL JAAIVD010000003 pseudo 625916487 LOC116889345 gem-associated protein 8-like X 37322290 37323064 + 116889345 MODEL JAAIVD010000014 pseudo 625916488 P2rx6 purinergic receptor P2X 6 ENCODES a protein that exhibits extracellularly ATP-gated monoatomic cation channel activity (ortholog); protein-containing complex binding (ortholog); FOUND IN cell junction (ortholog); cytoplasm (ortholog); dendritic spine (ortholog) 4 2814709 2824789 + 22301074;30032202 116898647 MODEL JAAIVD010000003;XM_032899874 XP_032755765 P2X purinoceptor 6 protein-coding 625916504 Gch1 GTP cyclohydrolase 1 ENCODES a protein that exhibits calcium ion binding (ortholog); GTP binding (ortholog); GTP cyclohydrolase I activity (ortholog); INVOLVED IN dihydrobiopterin metabolic process (ortholog); dopamine biosynthetic process (ortholog); negative regulation of blood pressure (ortholog); PARTICIPATES IN dopa responsive dystonia pathway; Segawa syndrome pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); autosomal recessive Segawa syndrome (ortholog); BH4-deficient hyperphenylalaninemia A (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) 12 75861953 75897122 + 22301074;30032202 116913736 MODEL JAAIVD010000007;XM_032918040 XP_032773931 protein-coding 625916514 Neto2 neuropilin and tolloid like 2 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); INVOLVED IN neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); regulation of neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); COVID-19 (ortholog); prostate cancer (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density (ortholog); postsynaptic density membrane (ortholog) 17 14059539 14115258 + 22301074 116886093 MODEL JAAIVD010000011;XM_032887418 XP_032743309 neuropilin and tolloid-like protein 2 protein-coding 625916527 Lypd6 LY6/PLAUR domain containing 6 ENCODES a protein that exhibits acetylcholine receptor inhibitor activity (ortholog); acetylcholine receptor regulator activity (ortholog); INVOLVED IN hippocampal interneuron differentiation (ortholog); nervous system development (ortholog); neuron differentiation (ortholog); FOUND IN membrane (ortholog); neuron projection (ortholog) 5 27923868 28062058 + 30032202 116901398 MODEL JAAIVD010000023;XM_032903269;XM_032903270;XM_032903271;XM_032903272 XP_032759160;XP_032759161;XP_032759162;XP_032759163 ly6/PLAUR domain-containing protein 6 protein-coding 625916544 Gpr88 G protein-coupled receptor 88 ENCODES a protein that exhibits beta2-adrenergic receptor activity (ortholog); cytoskeletal motor activity (ortholog); INVOLVED IN adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); locomotory behavior (ortholog); ASSOCIATED WITH Childhood-Onset Chorea with Psychomotor Retardation (ortholog); FOUND IN ciliary membrane (ortholog); cilium (ortholog); cytoplasm (ortholog) 3 43460234 43465141 + 22301074 116896335 MODEL JAAIVD010000012;XM_032897434;XM_032897435 XP_032753325;XP_032753326 probable G-protein coupled receptor 88 protein-coding 625916553 LOC116904618 olfactory receptor 6C74-like 6 30027755 30028687 + 22301074;30032202 116904618 MODEL JAAIVD010000024;XM_032907409 XP_032763300 protein-coding 625916556 Nudt13 nudix hydrolase 13 ENCODES a protein that exhibits NADH pyrophosphatase activity (ortholog); FOUND IN mitochondrion (ortholog) 12 90089334 90110624 + 22301074 116913730 MODEL JAAIVD010000007;XM_032918034;XM_032918035;XR_004389638 XP_032773925;XP_032773926 nucleoside diphosphate-linked moiety X motif 13 protein-coding 625916575 LOC116885946 paired immunoglobulin-like type 2 receptor beta 16 16136297 16139448 + 30032202 116885946 MODEL JAAIVD010000004;XM_032887263 XP_032743154 protein-coding 625916581 Osbp2 oxysterol binding protein 2 ENCODES a protein that exhibits cholesterol binding (ortholog); INVOLVED IN spermatid development (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog); apical dendrite (ortholog) 11 72704923 72727332 - 30032202 116912022 MODEL JAAIVD010000006;XM_032915909 XP_032771800 oxysterol-binding protein 2 protein-coding 625916597 Ccdc90b coiled-coil domain containing 90B FOUND IN mitochondrion (ortholog) 2 108605097 108620060 - 30032202 116891848 MODEL JAAIVD010000001;XM_032893218 XP_032749109 coiled-coil domain-containing protein 90B, mitochondrial protein-coding 625916610 LOC116912615 peptidyl-prolyl cis-trans isomerase FKBP2-like 11 13116581 13118927 + 116912615 MODEL JAAIVD010000006 pseudo 625916611 LOC116912695 vomeronasal type-2 receptor 116-like 11 18781329 18782121 + 116912695 MODEL JAAIVD010000006 pseudo 625916612 Ing1 inhibitor of growth family member 1 ENCODES a protein that exhibits histone H3K4me3 reader activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); protein import into nucleus (ortholog); regulation of programmed cell death (ortholog); ASSOCIATED WITH contact dermatitis (ortholog); Disease Progression (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN nucleus (ortholog) 13 72298088 72305513 - 30032202 116914620 MODEL JAAIVD010000008;XM_032918981;XM_032918983;XM_032918984 XP_032774872;XP_032774874;XP_032774875 inhibitor of growth protein 1 protein-coding 625916625 LOC116895208 TD and POZ domain-containing protein 3-like 3 5276379 5310077 - 116895208 MODEL JAAIVD010000012 pseudo 625916626 LOC116907345 ADP-sugar pyrophosphatase-like 8 33852622 33856408 - 116907345 MODEL JAAIVD010000027 pseudo 625916627 Adgrb3 adhesion G protein-coupled receptor B3 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN maintenance of synapse structure (ortholog); motor learning (ortholog); myoblast fusion (ortholog); ASSOCIATED WITH Dwarfism (ortholog); FOUND IN cerebellar climbing fiber to Purkinje cell synapse (ortholog); plasma membrane (ortholog); postsynapse (ortholog) 4 102373324 103091621 - 22301074;30032202 116899261 MODEL JAAIVD010000003;XM_032900877 XP_032756768 protein-coding 625916662 Trnaf-gaa transfer RNA phenylalanine (anticodon GAA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 16 28506644 28506716 + 116886024 MODEL JAAIVD010000004 trna 625916663 Gpsm1 G protein signaling modulator 1 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); GDP-dissociation inhibitor activity (ortholog); INVOLVED IN negative regulation of GTPase activity (ortholog); negative regulation of guanyl-nucleotide exchange factor activity (ortholog); positive regulation of macroautophagy (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN cell cortex (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) 5 10740404 10767067 - 22301074 116901275 MODEL JAAIVD010000023;XM_032903041;XM_032903042;XM_032903043;XM_032903044 XP_032758932;XP_032758933;XP_032758934;XP_032758935 G-protein-signaling modulator 1 protein-coding 625916690 Skor2 SKI family transcriptional corepressor 2 ENCODES a protein that exhibits chromatin binding (ortholog); histone deacetylase binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell development (ortholog); cerebellar Purkinje cell differentiation (ortholog); cerebellum morphogenesis (ortholog); ASSOCIATED WITH Dysarthria (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 15 55164444 55197411 - 22301074;30032202 116884683 MODEL JAAIVD010000010;XM_032885863 XP_032741754 protein-coding 625916700 Erich2 glutamate rich 2 5 47828022 47862075 + 116901494 MODEL JAAIVD010000023;XM_032903461;XM_032903462 XP_032759352;XP_032759353 glutamate-rich protein 2 protein-coding 625916719 Gab1 GRB2 associated binding protein 1 ENCODES a protein that exhibits signaling adaptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to vascular endothelial growth factor stimulus (ortholog); endothelial cell chemotaxis (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; erythropoietin signaling pathway; fibroblast growth factor signaling pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness 26 (ortholog); Experimental Liver Cirrhosis (ortholog); Helicobacter Infections (ortholog); FOUND IN cell cortex (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) 17 19201705 19310560 + 116886098 MODEL JAAIVD010000011;XM_032887426;XM_032887427 XP_032743317;XP_032743318 GRB2-associated-binding protein 1 protein-coding 625916737 C10H1orf53 chromosome 10 C1orf53 homolog FOUND IN mitochondrion (ortholog) 10 19200181 19205349 - 116911599 MODEL JAAIVD010000005;XM_032915574 XP_032771465 uncharacterized protein C1orf53 homolog protein-coding 625916744 Kif9 kinesin family member 9 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN extracellular matrix disassembly (ortholog); organelle disassembly (ortholog); regulation of flagellated sperm motility (ortholog); FOUND IN axonemal microtubule (ortholog); microtubule (ortholog); podosome (ortholog) 8 101067756 101111079 + 22301074;30032202 116907747 MODEL JAAIVD010000027;XM_032910884;XM_032910885 XP_032766775;XP_032766776 kinesin-like protein KIF9 protein-coding 625916772 LOC116895070 small nucleolar RNA SNORA17 2 22309401 22309488 - 116895070 MODEL JAAIVD010000001 pseudo 625916773 LOC116912747 E3 ubiquitin-protein ligase RNF4-like 11 14745644 14746516 - 22301074;30032202 116912747 MODEL JAAIVD010000006;XM_032916895 XP_032772786 protein-coding 625916778 LOC116883707 40S ribosomal protein S7-like 14 54245115 54245668 - 116883707 MODEL JAAIVD010000009 pseudo 625916779 Cpsf3 cleavage and polyadenylation specific factor 3 ENCODES a protein that exhibits 5'-3' RNA exonuclease activity (ortholog); metal ion binding (ortholog); RNA binding (ortholog); INVOLVED IN co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway (ortholog); mRNA 3'-end processing (ortholog); mRNA 3'-end processing by stem-loop binding and cleavage (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; ASSOCIATED WITH Neurodevelopmental Disorder with Hypotonia, Microcephaly, and Seizures (ortholog); neurodevelopmental disorder with microcephaly, hypotonia, nystagmus, and seizures (ortholog); FOUND IN mRNA cleavage and polyadenylation specificity factor complex (ortholog) 7 37827254 37855298 + 30032202 116904905 MODEL JAAIVD010000026;XM_032907514 XP_032763405 cleavage and polyadenylation specificity factor subunit 3 protein-coding 625916801 LOC116884879 60S ribosomal protein L32-like 15 19314269 19321706 - 116884879 MODEL JAAIVD010000010 pseudo 625916802 Noc4l nucleolar complex associated 4 homolog FOUND IN nucleolus (ortholog) 16 43692638 43697214 + 30032202 116885507 MODEL JAAIVD010000004;XM_032886799 XP_032742690 nucleolar complex protein 4 homolog protein-coding 625916821 Csnk1d casein kinase 1 delta ENCODES a protein that exhibits kinase activity (ortholog); protein kinase activity (ortholog); protein serine kinase activity (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); circadian regulation of gene expression (ortholog); Golgi organization (ortholog); PARTICIPATES IN Hedgehog signaling pathway; p53 signaling pathway; ribosome biogenesis pathway; ASSOCIATED WITH advanced sleep phase syndrome 1 (ortholog); advanced sleep phase syndrome 2 (ortholog); Alzheimer's disease (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cytosol (ortholog) 9 63043319 63073617 + 22301074;30032202 116909838 MODEL JAAIVD010000002;XM_032913562 XP_032769453 casein kinase I protein-coding 625916834 Steap1 STEAP family member 1 ENCODES a protein that exhibits ferric-chelate reductase (NADPH) activity (ortholog); heme binding (ortholog); FOUND IN endosome (ortholog); plasma membrane (ortholog) 6 137987463 137993935 - 30032202 116902989 MODEL JAAIVD010000024;XM_032905307 XP_032761198 metalloreductase STEAP1 protein-coding 625916842 Nceh1 neutral cholesterol ester hydrolase 1 ENCODES a protein that exhibits phosphate ion binding (ortholog); serine hydrolase activity (ortholog); INVOLVED IN ether lipid metabolic process (ortholog); protein dephosphorylation (ortholog); xenobiotic metabolic process (ortholog); ASSOCIATED WITH disease of cellular proliferation (ortholog); FOUND IN membrane (ortholog) 3 34245392 34310456 + 22301074 116896285 MODEL JAAIVD010000012;XM_032897366;XM_032897367 XP_032753257;XP_032753258 protein-coding 625916854 Gpr19 G protein-coupled receptor 19 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); FOUND IN cilium (ortholog); plasma membrane (ortholog) 6 14544630 14571276 + 22301074;30032202 116903167 MODEL JAAIVD010000024;XM_032905535;XM_032905536;XM_032905537 XP_032761426;XP_032761427;XP_032761428 probable G-protein coupled receptor 19 protein-coding 625916867 Samd11 sterile alpha motif domain containing 11 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); PH domain binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); retinal rod cell development (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); fundus dystrophy (ortholog); optic atrophy (ortholog); FOUND IN nucleus (ortholog); PRC1 complex (ortholog) 1 4403870 4421966 + 22301074;30032202 116891426 MODEL JAAIVD010000025;XM_032892479;XM_032892488;XR_004386835 XP_032748370;XP_032748379 sterile alpha motif domain-containing protein 11 protein-coding 625916890 Ift20 intraflagellar transport 20 ENCODES a protein that exhibits opsin binding (ortholog); small GTPase binding (ortholog); INVOLVED IN cardiac muscle cell differentiation (ortholog); centrosome localization (ortholog); cilium assembly (ortholog); FOUND IN acrosomal vesicle (ortholog); centriole (ortholog); centrosome (ortholog) 9 91900212 91905524 - 30032202 116909097 MODEL JAAIVD010000002;XM_032912568;XM_032912569 XP_032768459;XP_032768460 intraflagellar transport protein 20 homolog protein-coding 625916903 LOC116911688 contactin-associated protein like 5-4-like 10 81031108 81097665 - 30032202 116911688 MODEL JAAIVD010000005;XM_032915642;XR_004389334 XP_032771533 protein-coding 625916912 Brix1 biogenesis of ribosomes BRX1 FOUND IN chromosome (ortholog); nucleolus (ortholog) 3 170251611 170261218 + 22301074;30032202 116897125 MODEL JAAIVD010000012;XM_032898781 XP_032754672 ribosome biogenesis protein BRX1 homolog protein-coding 625916926 Znf446 zinc finger protein 446 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH Dwarfism (ortholog); High Myopia (ortholog); FOUND IN nuclear speck (ortholog) 2 174204765 174218172 - 22301074 116892625 MODEL JAAIVD010000001;XM_032894439;XM_032894440;XM_032894441;XM_032894442;XM_032894443 XP_032750330;XP_032750331;XP_032750332;XP_032750333;XP_032750334 protein-coding 625916947 LOC116901382 low-density lipoprotein receptor-related protein 1B-like 5 20173768 20372769 + 22301074 116901382 MODEL JAAIVD010000023;XM_032903249 XP_032759140 protein-coding 625916967 Ncoa1 nuclear receptor coactivator 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); nuclear estrogen receptor binding (ortholog); INVOLVED IN cellular response to hormone stimulus (ortholog); cellular response to Thyroglobulin triiodothyronine (ortholog); cerebellum development (ortholog); PARTICIPATES IN aldosterone signaling pathway; androgen signaling pathway; cortisol signaling pathway; ASSOCIATED WITH breast carcinoma (ortholog); Breast Neoplasms (ortholog); endometrial carcinoma (ortholog); FOUND IN chromatin (ortholog); protein-containing complex (ortholog); transcription regulator complex (ortholog) 7 24909012 25010790 - 22301074;30032202 116906026 MODEL JAAIVD010000026;XM_032909086;XM_032909087;XM_032909088;XM_032909089;XM_032909091 XP_032764977;XP_032764978;XP_032764979;XP_032764980;XP_032764982 protein-coding 625917002 Fkbp1b FKBP prolyl isomerase 1B ENCODES a protein that exhibits calcium channel inhibitor activity (ortholog); calcium channel regulator activity (ortholog); cyclic nucleotide binding (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); insulin secretion (ortholog); negative regulation of calcium-mediated signaling (ortholog); ASSOCIATED WITH Cardiac Arrhythmias (ortholog); cardiomyopathy (ortholog); catecholaminergic polymorphic ventricular tachycardia (ortholog); FOUND IN calcium channel complex (ortholog); cytoplasm (ortholog); membrane (ortholog) 7 25473656 25484228 - 22301074;30032202 116906288 MODEL JAAIVD010000026;XM_032909179;XM_032909180;XM_032909181;XM_032909182;XM_032909183 XP_032765070;XP_032765071;XP_032765072;XP_032765073;XP_032765074 peptidyl-prolyl cis-trans isomerase FKBP1B protein-coding 625917024 LOC116897435 glyceraldehyde-3-phosphate dehydrogenase-like 1 89887265 89902514 + 116897435 MODEL JAAIVD010000025 pseudo 625917025 LOC116904610 eukaryotic translation elongation factor 1 epsilon-1-like 6 25197700 25198218 - 116904610 MODEL JAAIVD010000024 pseudo 625917026 Pex13 peroxisomal biogenesis factor 13 ENCODES a protein that exhibits transmembrane protein transporter activity (ortholog); INVOLVED IN cellular response to reactive oxygen species (ortholog); cerebral cortex cell migration (ortholog); fatty acid alpha-oxidation (ortholog); PARTICIPATES IN adrenoleukodystrophy pathway; carnitine-acylcarnitine translocase deficiency; fatty acid beta degradation pathway; ASSOCIATED WITH adrenoleukodystrophy (ortholog); genetic disease (ortholog); infantile Refsum disease (ortholog); FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog) 11 93298294 93316267 + 22301074;30032202 116912834 MODEL JAAIVD010000006;XM_032917021 XP_032772912 peroxisome biogenesis factor 13 protein-coding 625917034 LOC116889931 olfactory receptor 6C6-like 1 160989000 160989952 + 116889931 MODEL JAAIVD010000025 pseudo 625917035 Gng11 G protein subunit gamma 11 ASSOCIATED WITH lung adenocarcinoma (ortholog); systemic juvenile rheumatoid arthritis (ortholog) 6 134604664 134609063 - 22301074;30032202 116902982 MODEL JAAIVD010000024;XM_032905300 XP_032761191 guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11 protein-coding 625917041 Rack1 receptor for activated C kinase 1 ENCODES a protein that exhibits BH3 domain binding (ortholog); cyclin binding (ortholog); enzyme activator activity (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cellular response to growth factor stimulus (ortholog); negative regulation of cell growth (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; insulin-like growth factor signaling pathway; protein kinase C (PKC) signaling pathway; ASSOCIATED WITH morphine dependence (ortholog); Mouth Neoplasms (ortholog); squamous cell carcinoma (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 31400835 31406395 + 30032202 116909075 MODEL JAAIVD010000002;XM_032912548 XP_032768439 receptor of activated protein C kinase 1 protein-coding 625917053 Gal3st1 galactose-3-O-sulfotransferase 1 ENCODES a protein that exhibits galactosylceramide sulfotransferase activity (ortholog); INVOLVED IN galactosylceramide biosynthetic process (ortholog); galactosylceramide metabolic process (ortholog); glycerolipid metabolic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH autism spectrum disorder (ortholog) 11 72985938 73001687 + 22301074;30032202 116912571 MODEL JAAIVD010000006;XM_032916686 XP_032772577 galactosylceramide sulfotransferase protein-coding 625917060 LOC116909244 putative lysozyme C-2 1 195390797 195398908 + 22301074;30032202 116909244 MODEL JAAIVD010000025;XM_032912765 XP_032768656 protein-coding 625917067 Vwa5b1 von Willebrand factor A domain containing 5B1 1 19600596 19642765 + 116893834 MODEL JAAIVD010000025;XM_032895554 XP_032751445 von Willebrand factor A domain-containing protein 5B1 protein-coding 625917091 Gnl2 G protein nucleolar 2 PARTICIPATES IN ribosome biogenesis pathway; FOUND IN nucleolus (ortholog) 1 33245592 33271150 - 22301074;30032202 116896807 MODEL JAAIVD010000025;XM_032898284 XP_032754175 nucleolar GTP-binding protein 2 protein-coding 625917111 Card9 caspase recruitment domain family member 9 ENCODES a protein that exhibits CARD domain binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN antifungal innate immune response (ortholog); apoptotic signaling pathway (ortholog); defense response to Gram-positive bacterium (ortholog); ASSOCIATED WITH ankylosing spondylitis (ortholog); genetic disease (ortholog); IgA glomerulonephritis (ortholog); FOUND IN CBM complex (ortholog); cytoplasm (ortholog); protein-containing complex (ortholog) 5 10727823 10736441 + 22301074;30032202 116901271 MODEL JAAIVD010000023;XM_032903036 XP_032758927 caspase recruitment domain-containing protein 9 protein-coding 625917128 LOC116895914 60S ribosome subunit biogenesis protein NIP7 homolog 3 120787837 120788453 + 116895914 MODEL JAAIVD010000012 pseudo 625917129 LOC116890035 ATP synthase subunit a-like 1 251789280 251789930 - 116890035 MODEL JAAIVD010000025 pseudo 625917130 Serpine1 serpin family E member 1 ENCODES a protein that exhibits endopeptidase inhibitor activity (ortholog); protease binding (ortholog); serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to aldosterone (ortholog); cellular response to angiotensin (ortholog); PARTICIPATES IN fibrinolysis pathway; hypoxia inducible factor pathway; oxygen homeostasis pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acquired Protein C Deficiency (ortholog); Acute Lung Injury (ortholog); FOUND IN chromaffin granule (ortholog); extracellular exosome (ortholog); extracellular matrix (ortholog) 16 16947758 16958217 + 30032202 116885785 MODEL JAAIVD010000004;XM_032887116 XP_032743007 plasminogen activator inhibitor 1 protein-coding 625917143 LOC116913794 uncharacterized LOC116913794 12 67480446 67488952 - 116913794 MODEL JAAIVD010000007;XR_004389642 ncrna 625917148 Rhou ras homolog family member U ENCODES a protein that exhibits GTPase activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); G1/S transition of mitotic cell cycle (ortholog); positive regulation of focal adhesion disassembly (ortholog); FOUND IN focal adhesion (ortholog) 17 43198715 43208723 + 22301074;30032202 116886257 MODEL JAAIVD010000011;XM_032887677 XP_032743568 rho-related GTP-binding protein RhoU protein-coding 625917155 LOC116894989 small nucleolar RNA SNORA19 2 141785252 141785384 + 116894989 MODEL JAAIVD010000001;XR_004387180 snorna 625917158 Tmem202 transmembrane protein 202 8 53351062 53376840 - 30032202 116906710 MODEL JAAIVD010000027;XM_032909516;XM_032909517 XP_032765407;XP_032765408 protein-coding 625917173 Krt82 keratin 82 ENCODES a protein that exhibits structural molecule activity (ortholog); FOUND IN cytoplasm (ortholog); keratin filament (ortholog) 1 261519642 261529800 + 22301074;30032202 116883700 MODEL JAAIVD010000025;XM_032884917 XP_032740808 keratin, type II cuticular Hb2 protein-coding 625917184 LOC116912311 uncharacterized LOC116912311 11 29993884 30002579 + 116912311 MODEL JAAIVD010000006;XR_004389444 ncrna 625917189 Rheb Ras homolog, mTORC1 binding ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN cellular response to nutrient levels (ortholog); negative regulation of cold-induced thermogenesis (ortholog); positive regulation of oligodendrocyte differentiation (ortholog); PARTICIPATES IN mTOR signaling pathway; Rheb mediated signaling pathway; ASSOCIATED WITH epilepsy (ortholog); Hemimegalencephaly (ortholog); intellectual disability (ortholog); FOUND IN dendrite (ortholog); endomembrane system (ortholog); glutamatergic synapse (ortholog) 6 153994337 154034854 - 22301074;30032202 116904216 MODEL JAAIVD010000024;XM_032907147 XP_032763038 GTP-binding protein Rheb protein-coding 625917201 Ppp1r15b protein phosphatase 1 regulatory subunit 15B ENCODES a protein that exhibits eukaryotic initiation factor eIF2 binding (ortholog); molecular adaptor activity (ortholog); protein phosphatase 1 binding (ortholog); INVOLVED IN ER overload response (ortholog); negative regulation of protein phosphorylation (ortholog); response to endoplasmic reticulum stress (ortholog); ASSOCIATED WITH COVID-19 (ortholog); genetic disease (ortholog); Microcephaly, Short Stature, and Impaired Glucose Metabolism 2 (ortholog); FOUND IN protein phosphatase type 1 complex (ortholog) 10 2706712 2711679 - 30032202 116911111 MODEL JAAIVD010000005;XM_032914951 XP_032770842 protein-coding 625917207 LOC116897947 olfactory receptor 5AC1-like 4 43083725 43084657 - 22301074;30032202 116897947 MODEL JAAIVD010000003;XM_032899346 XP_032755237 protein-coding 625917211 Smco2 single-pass membrane protein with coiled-coil domains 2 6 4521641 4543082 + 116902826 MODEL JAAIVD010000024;XM_032905156 XP_032761047 single-pass membrane and coiled-coil domain-containing protein 2 protein-coding 625917222 LOC116890527 60S ribosomal protein L23a-like 1 271791017 271791457 - 116890527 MODEL JAAIVD010000025 pseudo 625917223 Slc4a3 solute carrier family 4 member 3 ENCODES a protein that exhibits bicarbonate transmembrane transporter activity (ortholog); chloride:bicarbonate antiporter activity (ortholog); enzyme binding (ortholog); INVOLVED IN bicarbonate transport (ortholog); cardiac conduction (ortholog); pH reduction (ortholog); ASSOCIATED WITH Cardiac Arrhythmias (ortholog); genetic disease (ortholog); heart disease (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) 4 148898439 148911436 + 22301074;30032202 116899541 MODEL JAAIVD010000003;XM_032901429 XP_032757320 anion exchange protein 3 protein-coding 625917250 LOC116889758 endonuclease G, mitochondrial-like 22301074;30032202 116889758 MODEL JAAIVD010000081;XM_032890620 XP_032746511 protein-coding 625917251 LOC116888165 cancer/testis antigen 55-like X 116854780 116870301 - 116888165 MODEL JAAIVD010000014;XM_032889488 XP_032745379 protein-coding 625917258 Fubp3 far upstream element binding protein 3 ENCODES a protein that exhibits single-stranded DNA binding (ortholog); INVOLVED IN DNA-templated transcription (ortholog); intracellular mRNA localization (ortholog); positive regulation of DNA-templated transcription (ortholog); FOUND IN cytoplasm (ortholog); dendritic shaft (ortholog); neuronal cell body (ortholog) 5 4010084 4056613 - 22301074;30032202 116901164 MODEL JAAIVD010000023;XM_032902811 XP_032758702 far upstream element-binding protein 3 protein-coding 625917281 LOC116884914 vegetative cell wall protein gp1-like 15 8098302 8099147 - 116884914 MODEL JAAIVD010000010;XM_032886138 XP_032742029 protein-coding 625917284 Slc16a2 solute carrier family 16 member 2 ENCODES a protein that exhibits amino acid transmembrane transporter activity (ortholog); identical protein binding (ortholog); thyroid hormone transmembrane transporter activity (ortholog); INVOLVED IN amino acid import across plasma membrane (ortholog); amino acid metabolic process (ortholog); hormone transport (ortholog); ASSOCIATED WITH Allan-Herndon-Dudley syndrome (ortholog); autism spectrum disorder (ortholog); cholestasis (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog) X 66125023 66253731 - 22301074;30032202 116888501 MODEL JAAIVD010000014;XM_032889793 XP_032745684 monocarboxylate transporter 8 protein-coding 625917294 LOC116907339 olfactory receptor 8D2-like 8 32677802 32683995 + 116907339 MODEL JAAIVD010000027 pseudo 625917295 LOC116889819 putative elongin-A3 member C 116889819 MODEL JAAIVD010001099;XM_032890661 XP_032746552 protein-coding 625917296 LOC116886722 small nucleolar RNA SNORA5 17 1491654 1491790 - 116886722 MODEL JAAIVD010000011;XR_004386134 snorna 625917299 LOC116897128 39S ribosomal protein L40, mitochondrial-like 3 170241178 170241921 - 116897128 MODEL JAAIVD010000012 pseudo 625917300 LOC116887668 zinc finger protein 41-like 18 29322841 29324234 - 116887668 MODEL JAAIVD010000013 pseudo 625917301 Mogat1 monoacylglycerol O-acyltransferase 1 ENCODES a protein that exhibits 2-acylglycerol O-acyltransferase activity (ortholog); diacylglycerol O-acyltransferase activity (ortholog); INVOLVED IN diacylglycerol biosynthetic process (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog) 4 151708179 151734106 + 30032202 116898546 MODEL JAAIVD010000003;XM_032899759 XP_032755650 2-acylglycerol O-acyltransferase 1 protein-coding 625917311 Hrh1 histamine receptor H1 ENCODES a protein that exhibits histamine binding (ortholog); histamine receptor activity (ortholog); INVOLVED IN cellular response to histamine (ortholog); chemical synaptic transmission (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH allergic rhinitis (ortholog); asthma (ortholog); atherosclerosis (ortholog); FOUND IN plasma membrane (ortholog) 6 32036807 32123141 - 22301074;30032202 116903393 MODEL JAAIVD010000024;XM_032905893;XM_032905894;XM_032905895 XP_032761784;XP_032761785;XP_032761786 histamine H1 receptor protein-coding 625917323 LOC116895516 translocon-associated protein subunit delta-like 3 116284595 116285135 + 116895516 MODEL JAAIVD010000012 pseudo 625917324 Ostm1 osteoclastogenesis associated transmembrane protein 1 INVOLVED IN osteoclast differentiation (ortholog); transepithelial chloride transport (ortholog); ASSOCIATED WITH autosomal recessive osteopetrosis 5 (ortholog); genetic disease (ortholog); osteopetrosis (ortholog); FOUND IN cytosol (ortholog); lysosomal membrane (ortholog) 18 42379421 42410164 + 30032202 116887223 MODEL JAAIVD010000013;XM_032888786 XP_032744677 osteopetrosis-associated transmembrane protein 1 protein-coding 625917334 LOC116897892 cofilin-1-like 4 31900132 31900634 + 116897892 MODEL JAAIVD010000003 pseudo 625917335 Pi16 peptidase inhibitor 16 INVOLVED IN negative regulation of cell growth involved in cardiac muscle cell development (ortholog); FOUND IN extracellular region (ortholog) 18 4542898 4551015 - 22301074;30032202 116887403 MODEL JAAIVD010000013;XM_032888995;XM_032888996 XP_032744886;XP_032744887 protein-coding 625917348 Mpg N-methylpurine DNA glycosylase ENCODES a protein that exhibits alkylbase DNA N-glycosylase activity (ortholog); DNA binding (ortholog); INVOLVED IN base-excision repair (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 9 3651212 3657463 - 22301074;30032202 116908769 MODEL JAAIVD010000002;XM_032912133 XP_032768024 DNA-3-methyladenine glycosylase protein-coding 625917356 Cabcoco1 ciliary associated calcium binding coiled-coil 1 ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN sperm flagellum assembly (ortholog); ASSOCIATED WITH Hepatomegaly (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); sperm flagellum (ortholog) 18 18312253 18419095 + 116887274 MODEL JAAIVD010000013;XM_032888844;XM_032888846 XP_032744735;XP_032744737 ciliary-associated calcium-binding coiled-coil protein 1 protein-coding 625917370 Entr1 endosome associated trafficking regulator 1 INVOLVED IN endocytic recycling (ortholog); positive regulation of cilium assembly (ortholog); positive regulation of protein localization to cilium (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); early endosome (ortholog) 5 10700982 10707553 + 30032202 116901269 MODEL JAAIVD010000023;XM_032903027;XM_032903029;XM_032903030;XM_032903031;XM_032903032;XM_032903033 XP_032758918;XP_032758920;XP_032758921;XP_032758922;XP_032758923;XP_032758924 endosome-associated-trafficking regulator 1 protein-coding 625917390 LOC116914299 cytochrome P450 2D1 1 252143148 252147637 - 22301074;30032202 116914299 MODEL JAAIVD010000025;XM_032918544 XP_032774435 protein-coding 625917403 LOC116895293 calcium-activated chloride channel regulator 3A-1-like 3 15944984 15964870 + 22301074;30032202 116895293 MODEL JAAIVD010000012;XM_032896605 XP_032752496 protein-coding 625917421 Pinlyp phospholipase A2 inhibitor and LY6/PLAUR domain containing 2 170166332 170171775 + 22301074 116894489 MODEL JAAIVD010000001;XM_032896199 XP_032752090 phospholipase A2 inhibitor and Ly6/PLAUR domain-containing protein protein-coding 625917430 LOC116889296 60S ribosomal protein L17-like 1 129663228 129663798 + 116889296 MODEL JAAIVD010000025 pseudo 625917431 LOC116901831 40S ribosomal protein S25-like 5 98462816 98463220 - 30032202 116901831 MODEL JAAIVD010000023;XM_032903995 XP_032759886 protein-coding 625917436 Tspan32 tetraspanin 32 INVOLVED IN blood coagulation (ortholog); cytoskeleton organization (ortholog); defense response to protozoan (ortholog); FOUND IN cell surface (ortholog); integrin alphaIIb-beta3 complex (ortholog) 2 6683030 6696707 - 22301074 116890742 MODEL JAAIVD010000001;XM_032891199 XP_032747090 tetraspanin-32 protein-coding 625917448 Usp4 ubiquitin specific peptidase 4 ENCODES a protein that exhibits adenosine receptor binding (ortholog); cysteine-type deubiquitinase activity (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of protein ubiquitination (ortholog); positive regulation of TORC1 signaling (ortholog); protein deubiquitination (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 8 99678118 99720728 + 22301074 116907585 MODEL JAAIVD010000027;XM_032910624 XP_032766515 ubiquitin carboxyl-terminal hydrolase 4 protein-coding 625917474 LOC116894610 vomeronasal type-2 receptor 116-like 2 184955441 184970858 + 22301074;30032202 116894610 MODEL JAAIVD010000001;XM_032896326 XP_032752217 protein-coding 625917483 Anxa11 annexin A11 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN cytokinetic process (ortholog); phagocytosis (ortholog); response to calcium ion (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 23 (ortholog); genetic disease (ortholog); FOUND IN azurophil granule (ortholog); cytoplasm (ortholog); cytosol (ortholog) 13 1955954 2000486 + 22301074;30032202 116914432 MODEL JAAIVD010000008;XM_032918730 XP_032774621 protein-coding 625917502 Pigg phosphatidylinositol glycan anchor biosynthesis class G (EMM blood group) ENCODES a protein that exhibits mannose-ethanolamine phosphotransferase activity (ortholog); transferase activity (ortholog); INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH epilepsy (ortholog); genetic disease (ortholog); hyperphosphatasia with impaired intellectual development syndrome (ortholog); FOUND IN endoplasmic reticulum (ortholog) 11 18098593 18125247 + 22301074;30032202 116912247 MODEL JAAIVD010000006;XM_032916229;XM_032916230;XR_004389436 XP_032772120;XP_032772121 GPI ethanolamine phosphate transferase 2 protein-coding 625917526 Exd2 exonuclease 3'-5' domain containing 2 ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); 3'-5'-DNA exonuclease activity (ortholog); 3'-5'-RNA exonuclease activity (ortholog); INVOLVED IN DNA double-strand break processing (ortholog); double-strand break repair (ortholog); double-strand break repair via homologous recombination (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog); site of DNA damage (ortholog) 7 94680292 94714476 + 22301074;30032202 116905221 MODEL JAAIVD010000026;XM_032908034 XP_032763925 exonuclease 3'-5' domain-containing protein 2 protein-coding 625917539 Supv3l1 Suv3 like RNA helicase ENCODES a protein that exhibits 3'-5' RNA helicase activity (ortholog); 3'-5'-RNA exonuclease activity (ortholog); DNA binding (ortholog); INVOLVED IN DNA recombination (ortholog); mitochondrial mRNA catabolic process (ortholog); mitochondrial mRNA surveillance (ortholog); ASSOCIATED WITH alopecia (ortholog); ichthyosis (ortholog); Sarcopenia (ortholog); FOUND IN mitochondrial degradosome (ortholog); mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog) 18 28257599 28278105 - 22301074;30032202 116887142 MODEL JAAIVD010000013;XM_032888691;XM_032888692 XP_032744582;XP_032744583 ATP-dependent RNA helicase SUPV3L1, mitochondrial protein-coding 625917561 Rag1 recombination activating 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN adaptive immune response (ortholog); B cell differentiation (ortholog); negative regulation of T cell apoptotic process (ortholog); ASSOCIATED WITH Albuminuria (ortholog); Alpha/Beta T-Cell Lymphopenia with Gamma/Delta T-Cell Expansion, Severe Cytomegalovirus Infection, and Autoimmunity (ortholog); cataract 3 multiple types (ortholog); FOUND IN DNA recombinase complex (inferred); endodeoxyribonuclease complex (inferred); nucleoplasm (inferred) 5 79469849 79481046 - 22301074;30032202 116900514 E9MYP8 MODEL EU814874;EU814875;EU814880;EU814881;JAAIVD010000023;XM_032902243 ACN62930;ACN62931;ACN62935;ACN62936;XP_032758134 V(D)J recombination-activating protein 1 protein-coding 625917567 LOC116902014 inhibitor of growth protein 5-like 5 115381972 115383509 + 116902014 MODEL JAAIVD010000023 pseudo 625917568 Foxf1 forkhead box F1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); blood vessel development (ortholog); cardiac left ventricle morphogenesis (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH congenital diaphragmatic hernia (ortholog); gastrointestinal stromal tumor (ortholog); genetic disease (ortholog); FOUND IN nucleus (ortholog) 17 40734186 40737957 + 30032202 116886272 MODEL JAAIVD010000011;XM_032887696 XP_032743587 forkhead box protein F1 protein-coding 625917573 LOC116912158 peptidyl-prolyl cis-trans isomerase NIMA-interacting 4-like 11 15602902 15603311 + 116912158 MODEL JAAIVD010000006 pseudo 625917574 Nt5c1a 5'-nucleotidase, cytosolic IA ENCODES a protein that exhibits 5'-nucleotidase activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN adenosine metabolic process (ortholog); allantoin metabolic process (ortholog); AMP catabolic process (ortholog); FOUND IN cytosol (ortholog) 1 35048642 35063764 - 22301074;30032202 116897039 MODEL JAAIVD010000025;XM_032898663;XM_032898669 XP_032754554;XP_032754560 cytosolic 5'-nucleotidase 1A protein-coding 625917587 Tmc3 transmembrane channel like 3 ASSOCIATED WITH colorectal cancer (ortholog); FOUND IN cytosol (ortholog) 2 116706900 116745029 - 30032202 116894263 MODEL JAAIVD010000001;XM_032895968;XM_032895969 XP_032751859;XP_032751860 transmembrane channel-like protein 3 protein-coding 625917614 LOC116889880 vomeronasal type-2 receptor 116-like 1 156493578 156513236 + 22301074;30032202 116889880 MODEL JAAIVD010000025;XM_032890704 XP_032746595 protein-coding 625917623 LOC116887369 olfactory receptor 2B11-like 18 11023421 11024360 + 22301074 116887369 MODEL JAAIVD010000013;XM_032888964 XP_032744855 protein-coding 625917626 Defb126 defensin beta 126 INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); FOUND IN cell surface (ortholog); glycocalyx (ortholog) 5 131808446 131812649 - 22301074 116900695 MODEL JAAIVD010000023;XM_032902398 XP_032758289 beta-defensin 126 protein-coding 625917632 LOC116894732 small ubiquitin-related modifier 1-like 2 75331637 75333634 - 30032202 116894732 MODEL JAAIVD010000001;XM_032896419 XP_032752310 protein-coding 625917637 C1qb complement C1q B chain ENCODES a protein that exhibits identical protein binding (ortholog); IgG binding (ortholog); IgM binding (ortholog); INVOLVED IN complement activation, classical pathway (ortholog); inner ear development (ortholog); response to glucocorticoid (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); C1q Deficiency (ortholog); C1q Deficiency 2 (ortholog); FOUND IN complement component C1 complex (ortholog); complement component C1q complex (ortholog); extracellular region (ortholog) 1 21345523 21351157 + 22301074 116894206 MODEL JAAIVD010000025;XM_032895922 XP_032751813 complement C1q subcomponent subunit B protein-coding 625917644 Pdlim5 PDZ and LIM domain 5 ENCODES a protein that exhibits actin binding (ortholog); actinin binding (ortholog); protein kinase C binding (ortholog); INVOLVED IN cell growth involved in cardiac muscle cell development (ortholog); regulation of dendritic spine morphogenesis (ortholog); regulation of postsynapse assembly (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Crohn's disease (ortholog); dilated cardiomyopathy (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); cytosol (ortholog) 3 18429282 18590256 + 30032202 116896199 MODEL JAAIVD010000012;XM_032897247 XP_032753138 PDZ and LIM domain protein 5 protein-coding 625917661 Cfap97 cilia and flagella associated protein 97 ASSOCIATED WITH dilated cardiomyopathy (ortholog) 13 41719670 41751237 - 30032202 116914436 MODEL JAAIVD010000008;XM_032918734;XM_032918735;XM_032918736 XP_032774625;XP_032774626;XP_032774627 cilia- and flagella-associated protein 97 protein-coding 625917676 Smim11 small integral membrane protein 11 4 52310197 52316946 - 116898981 MODEL JAAIVD010000003;XM_032900407 XP_032756298 Smim11a small integral membrane protein 11A protein-coding 625917683 LOC116895931 TD and POZ domain-containing protein 1-like 3 125846005 125847085 - 116895931 MODEL JAAIVD010000012 pseudo 625917684 LOC116909018 C-C motif chemokine 2 9 88432101 88433937 - 22301074;30032202 116909018 MODEL JAAIVD010000002;XM_032912494 XP_032768385 protein-coding 625917691 Blm BLM RecQ like helicase ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); 8-hydroxy-2'-deoxyguanosine DNA binding (ortholog); ATP binding (ortholog); INVOLVED IN alpha-beta T cell differentiation (ortholog); cellular response to camptothecin (ortholog); cellular response to hydroxyurea (ortholog); PARTICIPATES IN DNA replication pathway; homologous recombination pathway of double-strand break repair; ASSOCIATED WITH Bloom syndrome (ortholog); Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); lateral element (ortholog) 2 119706569 119793515 + 22301074;30032202 116891914 MODEL JAAIVD010000001;XM_032893338 XP_032749229 Bloom syndrome protein protein-coding 625917717 LOC116909228 DNA repair endonuclease XPF-like 9 9221673 9236873 - 30032202 116909228 MODEL JAAIVD010000002;XM_032912731 XP_032768622 protein-coding 625917726 LOC116885572 replication protein A 14 kDa subunit-like 16 43591067 43591433 - 116885572 MODEL JAAIVD010000004 pseudo 625917727 Map3k21 mitogen-activated protein kinase kinase kinase 21 PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway 17 45429800 45463021 + 22301074;30032202 116886324 MODEL JAAIVD010000011;XM_032887771 XP_032743662 protein-coding 625917741 Mapk10 mitogen-activated protein kinase 10 ENCODES a protein that exhibits ATP binding (ortholog); JUN kinase activity (ortholog); INVOLVED IN cellular hyperosmotic response (ortholog); JNK cascade (ortholog); JUN phosphorylation (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; FasL mediated signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); congestive heart failure (ortholog); generalized epilepsy (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); mitochondrion (ortholog) 11 13027088 13297722 - 22301074;30032202 116911935 MODEL JAAIVD010000006;XM_032915826;XM_032915827;XM_032915828;XM_032915829 XP_032771717;XP_032771718;XP_032771719;XP_032771720 protein-coding 625917769 LOC116903707 zinc finger protein 431-like 6 7301661 7323276 - 30032202 116903707 MODEL JAAIVD010000024;XM_032906380 XP_032762271 protein-coding 625917777 Large2 LARGE xylosyl- and glucuronyltransferase 2 ENCODES a protein that exhibits dystroglycan binding (ortholog); glucuronosyltransferase activity (ortholog); glycosyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation via mannose (ortholog) 5 66502924 66513980 - 30032202 116901639 MODEL JAAIVD010000023;XM_032903728;XM_032903729;XM_032903730;XM_032903731;XM_032903732;XM_032903733;XM_032903734;XM_032903735;XM_032903736;XM_032903737;XM_032903738;XM_032903740 XP_032759619;XP_032759620;XP_032759621;XP_032759622;XP_032759623;XP_032759624;XP_032759625;XP_032759626;XP_032759627;XP_032759628;XP_032759629;XP_032759631 protein-coding 625917820 LOC116889683 2,3-bisphosphoglycerate-independent phosphoglycerate mutase-like 22301074;30032202 116889683 MODEL JAAIVD010000051;XM_032890572 XP_032746463 protein-coding 625917821 Dync2i2 dynein 2 intermediate chain 2 ENCODES a protein that exhibits dynein light chain binding (ortholog); INVOLVED IN cilium assembly (ortholog); intraciliary retrograde transport (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 3 (ortholog); fundus dystrophy (ortholog); FOUND IN axoneme (ortholog); centriole (ortholog); centrosome (ortholog) 5 6685750 6701516 + 30032202 116901204 MODEL JAAIVD010000023;XM_032902913 XP_032758804 Wdr34 WD repeat domain 34;WD repeat-containing protein 34 protein-coding 625917834 Med31 mediator complex subunit 31 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN limb development (ortholog); negative regulation of fibroblast proliferation (ortholog); protein ubiquitination (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; FOUND IN mediator complex (ortholog); nucleus (ortholog); ubiquitin ligase complex (ortholog) 9 43294549 43297993 + 22301074;30032202 116910231 MODEL JAAIVD010000002;XM_032914121 XP_032770012 mediator of RNA polymerase II transcription subunit 31 protein-coding 625917842 LOC116887880 olfactory receptor 13C7-like 1 2733883 2734296 + 22301074 116887880 MODEL JAAIVD010000025;XM_032889366 XP_032745257 protein-coding 625917845 LOC116884776 vesicle-associated membrane protein-associated protein A-like 15 40594108 40594910 + 30032202 116884776 MODEL JAAIVD010000010;XM_032886003 XP_032741894 protein-coding 625917850 Mgat4d MGAT4 family member D INVOLVED IN negative regulation of glycoprotein biosynthetic process (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi stack (ortholog) 17 16863779 16900313 - 30032202 116886528 MODEL JAAIVD010000011;XM_032888047 XP_032743938 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like protein MGAT4D protein-coding 625917865 LOC116888707 mediator of RNA polymerase II transcription subunit 21-like X 63340651 63341261 + 116888707 MODEL JAAIVD010000014 pseudo 625917866 LOC116900318 olfactory receptor 1052-like 5 64294237 64295175 - 22301074;30032202 116900318 MODEL JAAIVD010000023;XM_032902075 XP_032757966 protein-coding 625917869 Ctdspl CTD small phosphatase like INVOLVED IN negative regulation of G1/S transition of mitotic cell cycle (ortholog); negative regulation of protein phosphorylation (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH lung non-small cell carcinoma (ortholog) 8 110161354 110280713 + 22301074;30032202 116907900 MODEL JAAIVD010000027;XM_032911098;XM_032911099 XP_032766989;XP_032766990 CTD small phosphatase-like protein protein-coding 625917882 LOC116890342 U6 spliceosomal RNA 1 24394263 24394369 - 116890342 MODEL JAAIVD010000025;XR_004386564 snrna 625917885 Slc19a2 solute carrier family 19 member 2 ENCODES a protein that exhibits thiamine transmembrane transporter activity (ortholog); INVOLVED IN pyridoxine transport (ortholog); spermatogenesis (ortholog); thiamine diphosphate biosynthetic process (ortholog); PARTICIPATES IN thiamine metabolic pathway; ASSOCIATED WITH chronic kidney disease (ortholog); Deafness (ortholog); diabetes mellitus (ortholog); FOUND IN plasma membrane (ortholog) 10 43476513 43490647 + 22301074;30032202 116911085 MODEL JAAIVD010000005;XM_032914874;XM_032914875;XM_032914876 XP_032770765;XP_032770766;XP_032770767 thiamine transporter 1 protein-coding 625917904 LOC116900245 olfactory receptor 998-like 5 62969789 62970733 + 22301074;30032202 116900245 MODEL JAAIVD010000023;XM_032901996 XP_032757887 protein-coding 625917907 Chn1 chimerin 1 ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN ephrin receptor signaling pathway (ortholog); motor neuron axon guidance (ortholog); regulation of axonogenesis (ortholog); ASSOCIATED WITH autosomal dominant Robinow syndrome 2 (ortholog); Duane retraction syndrome (ortholog); Duane retraction syndrome 2 (ortholog) 5 50975852 51128819 - 22301074;30032202 116901523 MODEL JAAIVD010000023;XM_032903500;XM_032903501 XP_032759391;XP_032759392 N-chimaerin protein-coding 625917927 LOC116911758 gamma-aminobutyric acid receptor-associated protein-like 2 10 6466730 6467083 + 30032202 116911758 MODEL JAAIVD010000005;XM_032915752 XP_032771643 protein-coding 625917930 S1pr4 sphingosine-1-phosphate receptor 4 INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); sphingosine-1-phosphate receptor signaling pathway (ortholog); PARTICIPATES IN sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); FOUND IN mitochondrion (ortholog); presynapse (ortholog) 1 153389258 153391160 + 22301074 116889856 MODEL JAAIVD010000025;XM_032890683 XP_032746574 sphingosine 1-phosphate receptor 4 protein-coding 625917935 Epha6 EPH receptor A6 PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis 4 43482068 44375741 - 22301074;30032202 116898924 MODEL JAAIVD010000003;XM_032900334 XP_032756225 ephrin type-A receptor 6 protein-coding 625917957 Plekhh3 pleckstrin homology, MyTH4 and FERM domain containing H3 9 60460952 60469379 - 22301074 116910608 MODEL JAAIVD010000002;XM_032914550;XM_032914551;XM_032914552;XM_032914553;XR_004389165;XR_004389166;XR_004389167 XP_032770441;XP_032770442;XP_032770443;XP_032770444 pleckstrin homology domain-containing family H member 3 protein-coding 625917986 Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 ENCODES a protein that exhibits actin filament binding (ortholog); identical protein binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); adenosine metabolic process (ortholog); amino acid metabolic process (ortholog); ASSOCIATED WITH Chediak-Higashi syndrome (ortholog); genetic disease (ortholog); Hermansky-Pudlak syndrome (ortholog); FOUND IN actin filament (ortholog); BLOC-1 complex (ortholog); cell body (ortholog) 5 100827441 100838986 + 30032202 116901895 MODEL JAAIVD010000023;XM_032904105 XP_032759996 biogenesis of lysosome-related organelles complex 1 subunit 6 protein-coding 625917995 LOC116893738 adenosylhomocysteinase-like 2 19608301 19609563 + 116893738 MODEL JAAIVD010000001 pseudo 625917996 Aimp1 aminoacyl tRNA synthetase complex interacting multifunctional protein 1 ENCODES a protein that exhibits cytokine activity (ortholog); GTPase binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN blood vessel morphogenesis (ortholog); cell-cell signaling (ortholog); defense response to virus (ortholog); ASSOCIATED WITH genetic disease (ortholog); hypomyelinating leukodystrophy 3 (ortholog); Muscle Hypotonia (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cell surface (ortholog); cytosol (ortholog) 3 26234648 26257431 + 22301074 116896238 MODEL JAAIVD010000012;XM_032897304 XP_032753195 aminoacyl tRNA synthase complex-interacting multifunctional protein 1 protein-coding 625918007 Taf15 TATA-box binding protein associated factor 15 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); RNA binding (ortholog); INVOLVED IN gene expression (ortholog); mRNA stabilization (ortholog); RNA splicing (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH chondrosarcoma (ortholog); Disease Progression (ortholog); extraskeletal myxoid chondrosarcoma (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 9 87181635 87213298 - 22301074;30032202 116910627 MODEL JAAIVD010000002;XM_032914576 XP_032770467 TATA-binding protein-associated factor 2N protein-coding 625918027 LOC116904629 histone H1oo ENCODES a protein that exhibits nucleosomal DNA binding (ortholog); structural constituent of chromatin (ortholog); INVOLVED IN epigenetic regulation of gene expression (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) 6 30780568 30785635 - 22301074 116904629 MODEL JAAIVD010000024;XM_032907421 XP_032763312 protein-coding 625918036 Klhdc2 kelch domain containing 2 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ubiquitin-dependent protein catabolic process via the C-end degron rule pathway (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); nuclear body (ortholog); nuclear membrane (ortholog) 7 82958556 82973142 + 22301074 116905119 MODEL JAAIVD010000026;XM_032907858 XP_032763749 kelch domain-containing protein 2 protein-coding 625918053 Ripk1 receptor interacting serine/threonine kinase 1 ENCODES a protein that exhibits death domain binding (ortholog); death receptor binding (ortholog); identical protein binding (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); amyloid fibril formation (ortholog); apoptotic process (ortholog); PARTICIPATES IN ceramide signaling pathway; FasL mediated signaling pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH Autoinflammation with Episodic Fever and Lymphadenopathy (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN death-inducing signaling complex (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) 14 52581837 52608497 + 22301074;30032202 116883309 MODEL JAAIVD010000009;XM_032884363 XP_032740254 receptor-interacting serine/threonine-protein kinase 1 protein-coding 625918067 Lamp2 lysosomal associated membrane protein 2 ENCODES a protein that exhibits enzyme binding (ortholog); ion channel inhibitor activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); cellular response to starvation (ortholog); PARTICIPATES IN autophagy pathway; chaperone mediated autophagy pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); cardiomyopathy (ortholog); cholestasis (ortholog); FOUND IN autolysosome (ortholog); autophagosome membrane (ortholog); chaperone-mediated autophagy translocation complex (ortholog) X 101913626 101950698 + 22301074;30032202 116888115 MODEL JAAIVD010000014;XM_032889469 XP_032745360 lysosome-associated membrane glycoprotein 2 protein-coding 625918079 LOC116910256 WW domain-binding protein 11-like 9 31595838 31610333 - 116910256 MODEL JAAIVD010000002 pseudo 625918080 Sgcd sarcoglycan delta INVOLVED IN calcium ion homeostasis (ortholog); calcium-mediated signaling (ortholog); cardiac muscle cell contraction (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2F (ortholog); cardiomyopathy (ortholog); FOUND IN dystroglycan complex (ortholog); dystrophin-associated glycoprotein complex (ortholog); plasma membrane (ortholog) 9 29741278 30652881 - 22301074;30032202 116908647 MODEL JAAIVD010000002;XM_032911912;XM_032911913 XP_032767803;XP_032767804 delta-sarcoglycan protein-coding 625918096 Cav3 caveolin 3 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); calcium channel regulator activity (ortholog); connexin binding (ortholog); INVOLVED IN actin filament organization (ortholog); cardiac muscle cell development (ortholog); caveola assembly (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH Cardiomegaly (ortholog); cardiomyopathy (ortholog); Chromosome 3, Monosomy 3p25 (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); dystrophin-associated glycoprotein complex (ortholog) 6 34046365 34062023 - 22301074;30032202 116904639 MODEL JAAIVD010000024;XM_032907432 XP_032763323 caveolin-3 protein-coding 625918102 Znf521 zinc finger protein 521 ENCODES a protein that exhibits protein domain specific binding (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 15 29809889 30092711 + 30032202 116884611 MODEL JAAIVD010000010;XM_032885752 XP_032741643 protein-coding 625918114 Ube2o ubiquitin conjugating enzyme E2 O ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN positive regulation of BMP signaling pathway (ortholog); protein K63-linked ubiquitination (ortholog); protein monoubiquitination (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 9 67489451 67540228 + 116910343 MODEL JAAIVD010000002;XM_032914199 XP_032770090 (E3-independent) E2 ubiquitin-conjugating enzyme protein-coding 625918136 Nfkb2 nuclear factor kappa B subunit 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); extracellular matrix organization (ortholog); follicular dendritic cell differentiation (ortholog); PARTICIPATES IN adenosine signaling pathway; interleukin-12 signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH atrophic gastritis (ortholog); Cerebral Hemorrhage (ortholog); common variable immunodeficiency (ortholog); FOUND IN Bcl3/NF-kappaB2 complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 45766326 45773637 + 22301074;30032202 116891244 MODEL JAAIVD010000001;XM_032892120 XP_032748011 nuclear factor NF-kappa-B p100 subunit protein-coding 625918163 LOC116904111 heterogeneous nuclear ribonucleoproteins A2/B1-like 6 135503430 135504353 + 22301074 116904111 MODEL JAAIVD010000024;XM_032906989 XP_032762880 protein-coding 625918169 LOC116910096 CMRF-35-like molecule 4 9 69144582 69148792 - 30032202 116910096 MODEL JAAIVD010000002;XM_032913919 XP_032769810 protein-coding 625918176 LOC116903977 aldo-keto reductase family 1 member B7-like 6 105261808 105277268 - 30032202 116903977 MODEL JAAIVD010000024;XM_032906785;XR_004388318;XR_004388319 XP_032762676 protein-coding 625918196 LOC116894968 small nucleolar RNA SNORA36 family 2 228282011 228282142 + 116894968 MODEL JAAIVD010000001;XR_004387160 snorna 625918199 Fgf20 fibroblast growth factor 20 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); growth factor activity (ortholog); receptor-receptor interaction (ortholog); INVOLVED IN cell differentiation (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); inner ear receptor cell differentiation (ortholog); ASSOCIATED WITH late onset Parkinson's disease (ortholog); Renal Hypodysplasia/Aplasia 2 (ortholog) 13 47202900 47210143 + 22301074;30032202 116914713 MODEL JAAIVD010000008;XM_032919144 XP_032775035 protein-coding 625918205 LOC116894336 mas-related G-protein coupled receptor member A 2 152176791 152198999 + 22301074;30032202 116894336 MODEL JAAIVD010000001;XM_032896028 XP_032751919 protein-coding 625918211 LOC116889602 transmembrane protein 106B-like Y 258599 260607 - 116889602 MODEL JAAIVD010000015 pseudo 625918212 LOC116911865 U2 spliceosomal RNA 10 85670575 85670663 + 116911865 MODEL JAAIVD010000005 pseudo 625918213 Slc23a1 solute carrier family 23 member 1 ENCODES a protein that exhibits dehydroascorbic acid transmembrane transporter activity (ortholog); L-ascorbate:sodium symporter activity (ortholog); L-ascorbic acid transmembrane transporter activity (ortholog); INVOLVED IN brain development (ortholog); dehydroascorbic acid transport (ortholog); L-ascorbic acid transmembrane transport (ortholog); ASSOCIATED WITH cholestasis (ortholog); Experimental Liver Cirrhosis (ortholog); Intracranial Hemorrhages (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); brush border (ortholog) 15 8742773 8754154 + 22301074 116884318 MODEL JAAIVD010000010;XM_032885449 XP_032741340 protein-coding 625918231 LOC116900941 60S ribosomal protein L7-like 5 87278977 87279816 - 116900941 MODEL JAAIVD010000023 pseudo 625918232 Rpl9 ribosomal protein L9 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Diamond-Blackfan anemia (ortholog); Sepsis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic large ribosomal subunit (ortholog) 11 22408857 22411994 - 2227441;22301074;30032202 116912600 MODEL JAAIVD010000006;X51706;XM_032916723 CAA36002;XP_032772614 60S ribosomal protein L9 protein-coding 625918244 LOC116908520 ATP synthase subunit g, mitochondrial-like 9 48756751 48757042 - 116908520 MODEL JAAIVD010000002 pseudo 625918245 Letm1 leucine zipper and EF-hand containing transmembrane protein 1 ENCODES a protein that exhibits calcium:proton antiporter activity (ortholog); INVOLVED IN calcium export from the mitochondrion (ortholog); calcium ion transport (ortholog); cristae formation (ortholog); ASSOCIATED WITH Craniofacial Abnormalities (ortholog); Developmental Disabilities (ortholog); Ependymomas (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 11 71057532 71100413 + 22301074;30032202 116912130 MODEL JAAIVD010000006;XM_032916040 XP_032771931 mitochondrial proton/calcium exchanger protein protein-coding 625918263 Bnc2 basonuclin zinc finger protein 2 ENCODES a protein that exhibits DNA binding (ortholog); rDNA binding (ortholog); INVOLVED IN endochondral bone growth (ortholog); mesenchyme development (ortholog); roof of mouth development (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); cleft palate (ortholog); Congenital Lower Urinary Tract Obstruction (ortholog); FOUND IN chromatin (ortholog); fibrillar center (ortholog); nuclear body (ortholog) 1 69309004 69637630 + 30032202 116888107 MODEL JAAIVD010000025;XM_032889467;XM_032889470 XP_032745358;XP_032745361 basonuclin 2;zinc finger protein basonuclin-2 protein-coding 625918280 LOC116898305 6-phosphogluconate dehydrogenase, decarboxylating-like 4 31388227 31389727 - 116898305 MODEL JAAIVD010000003 pseudo 625918281 Nr0b1 nuclear receptor subfamily 0 group B member 1 ENCODES a protein that exhibits AF-2 domain binding (ortholog); DNA hairpin binding (ortholog); nuclear receptor binding (ortholog); INVOLVED IN adrenal gland development (ortholog); cell differentiation (ortholog); gonad development (ortholog); ASSOCIATED WITH 46,XY sex reversal 2 (ortholog); genetic disease (ortholog); hypogonadism (ortholog); FOUND IN centriolar satellite (ortholog); cytoplasm (ortholog); membrane (ortholog) X 47318956 47323073 - 30032202 116889257 MODEL JAAIVD010000014;XM_032890404 XP_032746295 protein-coding 625918287 LOC116894285 macrophage migration inhibitory factor-like 2 127463744 127464158 + 116894285 MODEL JAAIVD010000001 pseudo 625918288 LOC116895445 heat shock protein HSP 90-beta-like 3 71233637 71235593 - 116895445 MODEL JAAIVD010000012 pseudo 625918289 Cfap210 cilia and flagella associated protein 210 INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal B tubule inner sheath (ortholog); axonemal microtubule (ortholog); axoneme (ortholog) 5 47059291 47091886 - 116901486 MODEL JAAIVD010000023;XM_032903449 XP_032759340 Ccdc173 coiled-coil domain containing 173;coiled-coil domain-containing protein 173 protein-coding 625918302 LOC116913140 uncharacterized LOC116913140 12 56327349 56334584 - 116913140 MODEL JAAIVD010000007;XR_004389599 ncrna 625918307 LOC116889935 olfactory receptor 6C74-like 1 161123309 161124176 + 116889935 MODEL JAAIVD010000025 pseudo 625918308 Prkar2a protein kinase cAMP-dependent type II regulatory subunit alpha ENCODES a protein that exhibits beta-2 adrenergic receptor binding (ortholog); cAMP binding (ortholog); cAMP-dependent protein kinase inhibitor activity (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); negative regulation of cAMP-dependent protein kinase activity (ortholog); negative regulation of cAMP/PKA signal transduction (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH congestive heart failure (ortholog); FOUND IN axoneme (ortholog); cAMP-dependent protein kinase complex (ortholog); centrosome (ortholog) 8 100027065 100086822 + 22301074 116907614 MODEL JAAIVD010000027;XM_032910667 XP_032766558 cAMP-dependent protein kinase type II-alpha regulatory subunit protein-coding 625918323 LOC116897536 small nucleolar RNA SNORA48 3 74990322 74990464 - 116897536 MODEL JAAIVD010000012;XR_004387551 snorna 625918326 Trpc1 transient receptor potential cation channel subfamily C member 1 ENCODES a protein that exhibits ATPase binding (ortholog); inositol 1,4,5 trisphosphate binding (ortholog); monoatomic cation channel activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); cellular response to hypoxia (ortholog); melanin biosynthetic process (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); Diabetic Nephropathies (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN basolateral plasma membrane (ortholog); costamere (ortholog); cytoplasm (ortholog) 8 87162586 87206195 - 22301074;30032202 116907031 MODEL JAAIVD010000027;XM_032909973;XM_032909974;XM_032909976;XM_032909977;XM_032909978 XP_032765864;XP_032765865;XP_032765867;XP_032765868;XP_032765869 short transient receptor potential channel 1 protein-coding 625918353 Trnar-ucu transfer RNA arginine (anticodon UCU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889667 MODEL JAAIVD010000045 trna 625918354 Serhl2 serine hydrolase like 2 FOUND IN cytoplasmic vesicle (ortholog) 1 252513177 252534738 + 116890079 MODEL JAAIVD010000025;XM_032890842 XP_032746733 serine hydrolase-like protein 2 protein-coding 625918369 Gipc3 GIPC PDZ domain containing family member 3 ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 15 (ortholog); genetic disease (ortholog) 1 153549889 153554440 + 22301074 116904383 MODEL JAAIVD010000025;XM_032907253 XP_032763144 PDZ domain-containing protein GIPC3 protein-coding 625918378 Klhl32 kelch like family member 32 1 118612882 118828218 + 22301074 116902737 MODEL JAAIVD010000025;XM_032905088;XM_032905095;XM_032905100;XM_032905107 XP_032760979;XP_032760986;XP_032760991;XP_032760998 kelch-like protein 32 protein-coding 625918396 LOC116893132 nucleoside diphosphate kinase B-like 2 82225215 82360555 + 116893132 MODEL JAAIVD010000001 pseudo 625918397 M1ap meiosis 1 associated protein ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN female gamete generation (ortholog); male meiosis chromosome separation (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH CRYPTOZOOSPERMIA (ortholog); male infertility (ortholog); spermatogenic failure 3 (ortholog); FOUND IN cytoplasm (ortholog) 6 63194287 63275976 - 30032202 116902755 MODEL JAAIVD010000024;XM_032905101 XP_032760992 meiosis 1 arrest protein protein-coding 625918408 Zbed5 zinc finger BED-type containing 5 2 90332926 90338110 + 116893141 MODEL JAAIVD010000001;XM_032895067 XP_032750958 zinc finger BED domain-containing protein 5 protein-coding 625918413 Mrpl3 mitochondrial ribosomal protein L3 ASSOCIATED WITH brain disease (ortholog); combined oxidative phosphorylation deficiency 9 (ortholog); FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 8 96353199 96375720 + 22301074;30032202 116907438 MODEL JAAIVD010000027;XM_032910407 XP_032766298 39S ribosomal protein L3, mitochondrial protein-coding 625918427 Pbx1 PBX homeobox 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN adrenal gland development (ortholog); animal organ morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); brain infarction (ortholog); Burkitt lymphoma (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 10 47422896 47731239 - 22301074;30032202 116911453 MODEL JAAIVD010000005;XM_032915420;XM_032915421;XM_032915422;XM_032915423 XP_032771311;XP_032771312;XP_032771313;XP_032771314 pre-B-cell leukemia transcription factor 1 protein-coding 625918449 LOC116903002 cadherin-related family member 3-like 6 146376897 146473132 + 22301074 116903002 MODEL JAAIVD010000024;XM_032905313 XP_032761204 protein-coding 625918472 Ryk receptor like tyrosine kinase ENCODES a protein that exhibits ATP binding (ortholog); frizzled binding (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN axon guidance (ortholog); axonogenesis (ortholog); chemorepulsion of dopaminergic neuron axon (ortholog); ASSOCIATED WITH cleft palate (ortholog); Craniofacial Abnormalities (ortholog); orofacial cleft 1 (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); membrane (ortholog) 8 94137109 94208250 + 22301074;30032202 116907371 MODEL JAAIVD010000027;XM_032910322;XM_032910323 XP_032766213;XP_032766214 tyrosine-protein kinase RYK protein-coding 625918493 LOC116908996 keratin, type I cuticular Ha4-like 9 54784125 54787795 - 22301074;30032202 116908996 MODEL JAAIVD010000002;XM_032912465 XP_032768356 protein-coding 625918503 LOC116888694 uncharacterized LOC116888694 X 16526767 16528387 - 116888694 MODEL JAAIVD010000014;XR_004386337;XR_004386338 ncrna 625918510 Atp6ap1l ATPase H+ transporting accessory protein 1 like ASSOCIATED WITH Breast Neoplasms (ortholog) 3 205325291 205352454 + 30032202 116897308 MODEL JAAIVD010000012;XM_032899057 XP_032754948 V-type proton ATPase subunit S1-like protein protein-coding 625918521 Mog myelin oligodendrocyte glycoprotein INVOLVED IN response to folic acid (ortholog); response to lipid (ortholog); ASSOCIATED WITH demyelinating disease (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); multiple sclerosis (ortholog); FOUND IN cell surface (ortholog) 18 10006632 10017905 - 30032202 116886943 MODEL JAAIVD010000013;XM_032888441 XP_032744332 myelin-oligodendrocyte glycoprotein protein-coding 625918533 LOC116893432 vomeronasal type-2 receptor 116-like 2 175662161 175688115 - 116893432 MODEL JAAIVD010000001 pseudo 625918534 Zfyve21 zinc finger FYVE-type containing 21 ASSOCIATED WITH coronary artery disease (ortholog) 7 129411914 129428639 + 22301074 116905502 MODEL JAAIVD010000026;XM_032908523;XM_032908524;XM_032908526;XM_032908527 XP_032764414;XP_032764415;XP_032764417;XP_032764418 zinc finger FYVE domain-containing protein 21 protein-coding 625918554 LOC116908705 ribosome biogenesis protein NSA2 homolog 9 78347552 78348299 - 116908705 MODEL JAAIVD010000002 pseudo 625918555 Acsbg1 acyl-CoA synthetase bubblegum family member 1 ENCODES a protein that exhibits long-chain fatty acid-CoA ligase activity (ortholog); very long-chain fatty acid-CoA ligase activity (ortholog); INVOLVED IN long-chain fatty acid biosynthetic process (ortholog); long-chain fatty acid metabolic process (ortholog); ovarian follicle atresia (ortholog); ASSOCIATED WITH adrenoleukodystrophy (ortholog); demyelinating disease (ortholog); Neoplasm Metastasis (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); plasma membrane (ortholog) 8 48672529 48729770 - 30032202 116908293 MODEL JAAIVD010000027;XM_032911556 XP_032767447 long-chain-fatty-acid--CoA ligase ACSBG1 protein-coding 625918573 Suv39h2 SUV39H2 histone lysine methyltransferase ENCODES a protein that exhibits chromatin binding (ortholog); histone H3 methyltransferase activity (ortholog); histone H3K14ub reader activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); chromatin organization (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN histone modification pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH Parakeratosis (ortholog); FOUND IN chromatin (ortholog); heterochromatin (ortholog); nucleus (ortholog) 14 9911302 9928870 - 22301074;30032202 116883289 MODEL JAAIVD010000009;XM_032884282;XM_032884284 XP_032740173;XP_032740175 histone-lysine N-methyltransferase SUV39H2;suppressor of variegation 3-9 homolog 2 protein-coding 625918586 LOC116912462 growth-regulated alpha protein 11 4315492 4317269 + 22301074;30032202 116912462 MODEL JAAIVD010000006;XM_032916528 XP_032772419 protein-coding 625918594 LOC116906170 WW domain-binding protein 11-like 7 101872937 101979761 - 30032202 116906170 MODEL JAAIVD010000026;XM_032909147 XP_032765038 protein-coding 625918599 LOC116908039 C-C chemokine receptor 1-like protein 1 8 115055102 115056220 - 22301074;30032202 116908039 MODEL JAAIVD010000027;XM_032911313 XP_032767204 protein-coding 625918603 LOC116892689 zinc finger protein 581-like 2 177632385 177634333 + 116892689 MODEL JAAIVD010000001 pseudo 625918604 Eme1 essential meiotic structure-specific endonuclease 1 ENCODES a protein that exhibits crossover junction DNA endonuclease activity (ortholog); DNA binding (ortholog); INVOLVED IN double-strand break repair (ortholog); replication fork processing (ortholog); resolution of mitotic recombination intermediates (ortholog); FOUND IN chromatin (ortholog); heterochromatin (ortholog); Holliday junction resolvase complex (ortholog) 9 50897836 50904349 + 22301074;30032202 116908833 MODEL JAAIVD010000002;XM_032912253 XP_032768144 crossover junction endonuclease EME1 protein-coding 625918616 Anhx anomalous homeobox 18 36177416 36194282 - 116886967 MODEL JAAIVD010000013;XM_032888462 XP_032744353 anomalous homeobox protein protein-coding 625918629 LOC116907138 anaphase-promoting complex subunit 15-like 8 47148815 47151866 + 116907138 MODEL JAAIVD010000027 pseudo 625918630 LOC116883608 elongin-B-like 14 22013411 22013797 - 22301074;30032202 116883608 MODEL JAAIVD010000009;XM_032884796 XP_032740687 protein-coding 625918634 LOC116913983 asparagine synthetase domain-containing protein 1-like 12 19866425 19868323 - 116913983 MODEL JAAIVD010000007 pseudo 625918635 Crls1 cardiolipin synthase 1 ENCODES a protein that exhibits cardiolipin synthase (CMP-forming) activity (ortholog); INVOLVED IN cardiolipin biosynthetic process (ortholog); response to phosphatidylethanolamine (ortholog); response to thyroxine (ortholog); PARTICIPATES IN cardiolipin biosynthetic pathway; glycerophospholipid metabolic pathway; ASSOCIATED WITH combined oxidative phosphorylation deficiency 57 (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) 5 112556460 112575612 + 22301074;30032202 116902009 MODEL JAAIVD010000023;XM_032904276 XP_032760167 cardiolipin synthase (CMP-forming) protein-coding 625918646 LOC116912203 UDP-glucuronosyltransferase 2B2 11 1502619 1518997 + 22301074 116912203 MODEL JAAIVD010000006;XM_032916143;XM_032916144 XP_032772034;XP_032772035 protein-coding 625918661 LOC116893407 elongin-B-like 2 173350484 173362697 - 116893407 MODEL JAAIVD010000001 pseudo 625918662 Acad9 acyl-CoA dehydrogenase family member 9 ENCODES a protein that exhibits acyl-CoA dehydrogenase activity (ortholog); long-chain fatty acyl-CoA dehydrogenase activity (ortholog); medium-chain fatty acyl-CoA dehydrogenase activity (ortholog); INVOLVED IN long-chain fatty acid metabolic process (ortholog); medium-chain fatty acid metabolic process (ortholog); mitochondrial respiratory chain complex I assembly (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH genetic disease (ortholog); mitochondrial complex I deficiency (ortholog); nuclear type mitochondrial complex I deficiency 20 (ortholog); FOUND IN dendrite (ortholog); mitochondrial complex I intermediate assembly complex (ortholog); mitochondrial membrane (ortholog) 3 117857266 117880512 - 22301074;30032202 116896935 MODEL JAAIVD010000012;XM_032898503 XP_032754394 complex I assembly factor ACAD9, mitochondrial protein-coding 625918684 LOC116891037 ATP synthase F(0) complex subunit C2, mitochondrial 2 23126804 23127443 - 22301074;30032202 116891037 MODEL JAAIVD010000001;XM_032891719 XP_032747610 protein-coding 625918689 Tpd52l2 TPD52 like 2 ENCODES a protein that exhibits protein homodimerization activity (ortholog); FOUND IN cytoplasm (ortholog); perinuclear region of cytoplasm (ortholog) 5 158582229 158603080 + 30032202 116902443 MODEL JAAIVD010000023;XM_032904984;XM_032904986;XM_032904987;XM_032904988;XM_032904989;XM_032904990;XM_032904991;XM_032904992;XM_032904993 XP_032760875;XP_032760877;XP_032760878;XP_032760879;XP_032760880;XP_032760881;XP_032760882;XP_032760883;XP_032760884 tumor protein D54 protein-coding 625918720 LOC116900320 olfactory receptor 5AS1-like 5 64345625 64346563 - 22301074;30032202 116900320 MODEL JAAIVD010000023;XM_032902077 XP_032757968 protein-coding 625918723 LOC116890582 small nucleolar RNA SNORA17 1 218784685 218784810 + 116890582 MODEL JAAIVD010000025;XR_004386744 snorna 625918726 Vps29 VPS29 retromer complex component INVOLVED IN endocytic recycling (ortholog); regulation of autophagy (ortholog); PARTICIPATES IN retromer-mediated pathway; FOUND IN cytosol (ortholog); endosome (ortholog); protein-containing complex (ortholog) 16 31485932 31494833 - 22301074;30032202 116885807 MODEL JAAIVD010000004;XM_032887140;XM_032887141 XP_032743031;XP_032743032 vacuolar protein sorting-associated protein 29 protein-coding 625918738 Cdr1 cerebellar degeneration related 1 X 120854212 120856551 - 116888188 MODEL JAAIVD010000014;XM_032889501 XP_032745392 cerebellar degeneration related protein 1;cerebellar degeneration-related antigen 1 protein-coding 625918745 Trnak-cuu transfer RNA lysine (anticodon CUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 848688 848760 - 116910822 MODEL JAAIVD010000002 trna 625918746 LOC116894673 trace amine-associated receptor 7c-like 2 210088310 210089386 + 22301074;30032202 116894673 MODEL JAAIVD010000001;XM_032896375 XP_032752266 protein-coding 625918749 LOC116892788 vomeronasal type-2 receptor 116-like 2 185506733 185520044 + 22301074;30032202 116892788 MODEL JAAIVD010000001;XM_032894661 XP_032750552 protein-coding 625918758 LOC116900559 olfactory receptor 4K13-like 5 90033756 90034703 + 22301074 116900559 MODEL JAAIVD010000023;XM_032902284 XP_032758175 protein-coding 625918761 LOC116898013 putative glutathione-specific gamma-glutamylcyclotransferase 2 4 72687274 72687876 + 116898013 MODEL JAAIVD010000003 pseudo 625918762 Nrp1 neuropilin 1 ENCODES a protein that exhibits growth factor binding (ortholog); GTPase activator activity (ortholog); protein kinase binding (ortholog); INVOLVED IN angiogenesis (ortholog); angiogenesis involved in coronary vascular morphogenesis (ortholog); artery morphogenesis (ortholog); PARTICIPATES IN vascular endothelial growth factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); COVID-19 (ortholog); diabetic retinopathy (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); cytosol (ortholog) 17 47855749 48002365 + 22301074 116886081 MODEL JAAIVD010000011;XM_032887401 XP_032743292 neuropilin-1 protein-coding 625918783 Rit1 Ras like without CAAX 1 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN Ras protein signal transduction (ortholog); ASSOCIATED WITH brain disease (ortholog); cardiofaciocutaneous syndrome (ortholog); cherubism (ortholog); FOUND IN plasma membrane (ortholog) 3 64827655 64841924 - 22301074;30032202 116896675 MODEL JAAIVD010000012;XM_032898046;XM_032898047;XM_032898048;XM_032898049 XP_032753937;XP_032753938;XP_032753939;XP_032753940 GTP-binding protein Rit1 protein-coding 625918799 LOC116888287 claudin-34-like X 37481925 37482551 + 30032202 116888287 MODEL JAAIVD010000014;XM_032889563 XP_032745454 protein-coding 625918802 LOC116912226 eukaryotic initiation factor 4A-I-like 11 60526057 60527279 - 22301074;30032202 116912226 MODEL JAAIVD010000006;XM_032916185 XP_032772076 protein-coding 625918806 LOC116896092 ADP/ATP translocase 2-like 3 218572087 218573761 + 116896092 MODEL JAAIVD010000012 pseudo 625918807 LOC116901007 choline/ethanolamine kinase-like 5 111910444 111911407 - 116901007 MODEL JAAIVD010000023 pseudo 625918808 Srrm1 serine and arginine repetitive matrix 1 PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH gestational diabetes (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); spliceosomal complex (ortholog) 1 22864229 22896343 + 22301074;30032202 116894554 MODEL JAAIVD010000025;XM_032896267 XP_032752158 serine/arginine repetitive matrix protein 1 protein-coding 625918830 LOC116900474 olfactory receptor 4C12-like 5 71494553 71495466 - 22301074 116900474 MODEL JAAIVD010000023;XM_032902209 XP_032758100 protein-coding 625918834 LOC116894200 olfactory receptor 484-like 2 106285272 106286216 - 22301074;30032202 116894200 MODEL JAAIVD010000001;XM_032895913 XP_032751804 protein-coding 625918837 Zc3h11d zinc finger CCCH-type containing 11D 1 178921703 178953274 + 22301074 116889999 MODEL JAAIVD010000025;XM_032890784;XM_032890785;XM_032890786 XP_032746675;XP_032746676;XP_032746677 C1H12orf50 chromosome 1 C12orf50 homolog;uncharacterized protein C12orf50 homolog APPROVED protein-coding 625918861 LOC116905823 40S ribosomal protein S18-like 7 18290765 18291201 + 116905823 MODEL JAAIVD010000026 pseudo 625918862 LOC116900889 olfactory receptor 4C6-like 5 70222723 70223640 + 22301074 116900889 MODEL JAAIVD010000023;XM_032902564 XP_032758455 protein-coding 625918865 LOC116906151 phospholipase A2-like 7 95236448 95243442 - 116906151 MODEL JAAIVD010000026 pseudo 625918866 LOC116910304 retinol dehydrogenase 7 1 206275117 206280177 - 22301074 116910304 MODEL JAAIVD010000025;XM_032914173 XP_032770064 protein-coding 625918874 LOC116885087 U6 spliceosomal RNA 15 40580093 40580191 + 116885087 MODEL JAAIVD010000010 pseudo 625918875 Mrpl30 mitochondrial ribosomal protein L30 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 4 114095835 114100841 + 22301074;30032202 116899306 MODEL JAAIVD010000003;XM_032900965 XP_032756856 39S ribosomal protein L30, mitochondrial protein-coding 625918883 LOC116889101 glyceraldehyde-3-phosphate dehydrogenase-like 1 120739614 120740616 + 116889101 MODEL JAAIVD010000025 pseudo 625918884 LOC116883219 60S ribosomal protein L29-like 14 47963145 47986851 - 116883219 MODEL JAAIVD010000009 pseudo 625918885 Exph5 exophilin 5 ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN keratinocyte development (ortholog); multivesicular body sorting pathway (ortholog); positive regulation of exocytosis (ortholog); ASSOCIATED WITH epidermolysis bullosa (ortholog); Epidermolysis Bullosa Simplex 4, Localized or Generalized Intermediate, Autosomal Recessive (ortholog); genetic disease (ortholog); FOUND IN endosome (ortholog) 8 47285726 47361493 + 22301074;30032202 116906882 MODEL JAAIVD010000027;XM_032909794;XM_032909795;XM_032909796 XP_032765685;XP_032765686;XP_032765687 exophilin-5 protein-coding 625918901 LOC116894391 keratin-associated protein 20-2-like 2 157133420 157133602 + 116894391 MODEL JAAIVD010000001;XM_032896098 XP_032751989 protein-coding 625918904 Bpgm bisphosphoglycerate mutase ENCODES a protein that exhibits bisphosphoglycerate mutase activity (ortholog); INVOLVED IN cellular response to stress (ortholog); defense response to protozoan (ortholog); erythrocyte development (ortholog); PARTICIPATES IN Fanconi syndrome pathway; fructose-1,6-bisphosphatase deficiency pathway; gluconeogenesis pathway; ASSOCIATED WITH familial erythrocytosis 8 (ortholog) 6 105146707 105170222 - 22301074;30032202 116903976 MODEL JAAIVD010000024;XM_032906783;XM_032906784 XP_032762674;XP_032762675 protein-coding 625918913 LOC116911307 complement factor H-related protein 2-like 10 20082199 20097131 - 116911307 MODEL JAAIVD010000005;XM_032915222 XP_032771113 protein-coding 625918922 LOC116894593 vomeronasal type-1 receptor 2-like 2 181406175 181407120 - 116894593 MODEL JAAIVD010000001 pseudo 625918923 Pbld phenazine biosynthesis like protein domain containing ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); apoptotic process (ortholog); maintenance of gastrointestinal epithelium (ortholog); ASSOCIATED WITH pre-malignant neoplasm (ortholog); FOUND IN cytoplasm (ortholog) 18 23608372 23624520 - 22301074;30032202 116887278 MODEL JAAIVD010000013;XM_032888858 XP_032744749 phenazine biosynthesis-like domain-containing protein protein-coding 625918936 LOC116894937 small nucleolar RNA SNORD115 2 140310470 140310549 - 116894937 MODEL JAAIVD010000001;XR_004387135 snorna 625918939 LOC116889099 60S ribosomal protein L7-like X 114270255 114271000 - 116889099 MODEL JAAIVD010000014 pseudo 625918940 LOC116910254 olfactory receptor 6C76-like 1 161514316 161515211 + 22301074;30032202 116910254 MODEL JAAIVD010000025;XM_032914163 XP_032770054 protein-coding 625918943 Csdc2 cold shock domain containing C2 ENCODES a protein that exhibits RNA binding (ortholog); transcription factor binding (ortholog) 1 251674802 251688985 + 30032202 116914107 MODEL JAAIVD010000025;XM_032918410 XP_032774301 cold shock domain-containing protein C2 protein-coding 625918951 LOC116893089 glycine cleavage system H protein, mitochondrial-like 2 54970382 54974715 - 22301074;30032202 116893089 MODEL JAAIVD010000001;XM_032895032 XP_032750923 protein-coding 625918956 LOC116904130 uncharacterized LOC116904130 6 137762931 137767774 - 116904130 MODEL JAAIVD010000024;XR_004388330 ncrna 625918961 LOC116884087 small nucleolar RNA SNORA17 14 70718496 70718615 - 116884087 MODEL JAAIVD010000009 pseudo 625918962 LOC116889066 ralBP1-associated Eps domain-containing protein 2-like X 23724720 23795086 + 22301074;30032202 116889066 MODEL JAAIVD010000014;XM_032890250 XP_032746141 protein-coding 625918968 Cd72 CD72 molecule ENCODES a protein that exhibits receptor ligand activity (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN negative regulation of B cell receptor signaling pathway (ortholog); FOUND IN plasma membrane (ortholog) 1 3043540 3050598 + 30032202 116891099 MODEL JAAIVD010000025;XM_032891815 XP_032747706 B-cell differentiation antigen CD72 protein-coding 625918981 LOC116906166 ligand-dependent nuclear receptor-interacting factor 1-like 7 101590445 101704380 + 116906166 MODEL JAAIVD010000026 pseudo 625918982 Hif3a hypoxia inducible factor 3 subunit alpha ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH Chronic Intermittent Hypoxia (ortholog); pulmonary hypertension (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 172016485 172042606 + 22301074;30032202 116892593 MODEL JAAIVD010000001;XM_032894373 XP_032750264 hypoxia-inducible factor 3-alpha protein-coding 625919001 Nol8 nucleolar protein 8 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); protein localization to nucleolus (ortholog); rRNA processing (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN nucleolus (ortholog) 14 68624693 68649225 + 22301074;30032202 116883602 MODEL JAAIVD010000009;XM_032884784;XM_032884785;XM_032884786;XM_032884787 XP_032740675;XP_032740676;XP_032740677;XP_032740678 protein-coding 625919031 LOC116903990 uncharacterized LOC116903990 6 107348080 107481110 - 116903990 MODEL JAAIVD010000024;XR_004388320;XR_004388321 ncrna 625919039 Rpl10l ribosomal protein L10 like ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); male meiosis I (ortholog); ribosomal large subunit assembly (ortholog); ASSOCIATED WITH Intellectual Developmental Disorder with Dysmorphic Facies and Ptosis (ortholog); prostate cancer (ortholog); spermatogenic failure 4 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic large ribosomal subunit (ortholog) 7 80037169 80038249 - 22301074;30032202 116905107 MODEL JAAIVD010000026;XM_032907844 XP_032763735 60S ribosomal protein L10-like protein-coding 625919044 LOC116910236 uncharacterized LOC116910236 9 12375985 12376557 + 116910236 MODEL JAAIVD010000002;XR_004389144 ncrna 625919048 LOC116892581 pregnancy-specific glycoprotein 22-like 2 171828748 171837433 + 30032202 116892581 MODEL JAAIVD010000001;XM_032894361 XP_032750252 protein-coding 625919056 LOC116887957 small nuclear ribonucleoprotein-associated protein N-like X 64686307 64687025 + 116887957 MODEL JAAIVD010000014 pseudo 625919057 LOC116885623 uncharacterized LOC116885623 16 4887075 4888950 + 116885623 MODEL JAAIVD010000004;XR_004386027 ncrna 625919061 LOC116906408 small nucleolar RNA SNORD113/SNORD114 family 7 5522924 5522990 - 116906408 MODEL JAAIVD010000026 pseudo 625919062 Ndnf neuron derived neurotrophic factor ENCODES a protein that exhibits glycosaminoglycan binding (ortholog); heparin binding (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); cellular response to hypoxia (ortholog); ASSOCIATED WITH endometriosis (ortholog); Hypogonadotropic Hypogonadism 25 with Anosmia (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) 6 75907910 75945038 - 22301074;30032202 116903698 MODEL JAAIVD010000024;XM_032906372 XP_032762263 protein NDNF protein-coding 625919070 Itga7 integrin subunit alpha 7 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); integrin binding (ortholog); laminin binding (ortholog); INVOLVED IN blood vessel morphogenesis (ortholog); cell adhesion (ortholog); cell migration (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH arteriosclerosis (ortholog); cardiomyopathy (ortholog); Colonic Neoplasms (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); integrin alpha7-beta1 complex (ortholog) 1 156409255 156435812 + 22301074;30032202 116906626 MODEL JAAIVD010000025;XM_032909387;XM_032909396;XM_032909406;XM_032909415;XM_032909421 XP_032765278;XP_032765287;XP_032765297;XP_032765306;XP_032765312 integrin alpha-7 protein-coding 625919109 Ankrd24 ankyrin repeat domain 24 INVOLVED IN auditory receptor cell stereocilium organization (ortholog); sensory perception of sound (ortholog); FOUND IN plasma membrane (ortholog); stereocilium (ortholog) 1 153241983 153260609 - 30032202 116906244 MODEL JAAIVD010000025;XM_032909165 XP_032765056 ankyrin repeat domain-containing protein 24 protein-coding 625919134 Tor4a torsin family 4 member A ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 5 11990014 11992831 + 22301074;30032202 116901320 MODEL JAAIVD010000023;XM_032903133 XP_032759024 torsin-4A protein-coding 625919139 LOC116889749 serine/arginine-rich splicing factor 7-like 116889749 MODEL JAAIVD010000079 pseudo 625919140 Hhatl hedgehog acyltransferase like INVOLVED IN negative regulation of N-terminal protein palmitoylation (ortholog); FOUND IN endoplasmic reticulum (ortholog); perinuclear region of cytoplasm (ortholog) 8 112943507 112950513 - 30032202 116907979 MODEL JAAIVD010000027;XM_032911220;XM_032911221;XM_032911222 XP_032767111;XP_032767112;XP_032767113 protein-cysteine N-palmitoyltransferase HHAT-like protein protein-coding 625919160 Tank TRAF family member associated NFKB activator ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); deubiquitinase activator activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to interleukin-1 (ortholog); cellular response to ionizing radiation (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Neoplasms (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) 5 39232504 39293517 + 30032202 116901444 MODEL JAAIVD010000023;XM_032903377;XM_032903378 XP_032759268;XP_032759269 TRAF family member-associated NF-kappa-B activator protein-coding 625919179 Gpatch3 G-patch domain containing 3 INVOLVED IN negative regulation of RIG-I signaling pathway (ortholog); negative regulation of type I interferon production (ortholog); positive regulation of DNA-templated transcription (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 1 24649406 24658857 - 22301074;30032202 116895129 MODEL JAAIVD010000025;XM_032896520 XP_032752411 G patch domain-containing protein 3 protein-coding 625919190 Atp1a1 ATPase Na+/K+ transporting subunit alpha 1 ENCODES a protein that exhibits ADP binding (ortholog); ankyrin binding (ortholog); ATP binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); cellular response to steroid hormone stimulus (ortholog); intracellular potassium ion homeostasis (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH adenoma (ortholog); adrenal cortical adenoma (ortholog); Charcot-Marie-Tooth Disease Type 2A2 (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); caveola (ortholog) 3 56460063 56488145 + 22301074;30032202 116896459 MODEL JAAIVD010000012;XM_032897619 XP_032753510 sodium/potassium-transporting ATPase subunit alpha-1 protein-coding 625919217 LOC116894959 small nucleolar RNA SNORA65 2 179242996 179243125 - 116894959 MODEL JAAIVD010000001;XR_004387153 snorna 625919220 C5H20orf202 chromosome 5 C20orf202 homolog 5 131058788 131064214 - 116902110 MODEL JAAIVD010000023;XM_032904420 XP_032760311 uncharacterized protein C20orf202 homolog protein-coding 625919226 Pla2g2e phospholipase A2 group IIE ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); calcium ion binding (ortholog); obsolete calcium-dependent phospholipase A2 activity (ortholog); INVOLVED IN low-density lipoprotein particle remodeling (ortholog); phosphatidylcholine metabolic process (ortholog); phosphatidylglycerol metabolic process (ortholog); FOUND IN extracellular region (ortholog) 1 19318201 19321691 - 22301074;30032202 116886526 MODEL JAAIVD010000025;XM_032888049 XP_032743940 group IIE secretory phospholipase A2 protein-coding 625919233 Cfap119 cilia and flagella associated protein 119 INVOLVED IN gene expression (ortholog); single fertilization (ortholog); sperm flagellum assembly (ortholog); FOUND IN acrosomal vesicle (ortholog); axoneme (ortholog); cytoplasm (ortholog) 2 74312230 74317390 + 116891467 MODEL JAAIVD010000001;XM_032892561 XP_032748452 Ccdc189 coiled-coil domain containing 189;coiled-coil domain-containing protein 189 protein-coding 625919246 LOC116899858 small nucleolar RNA SNORA17 4 111335979 111336101 + 116899858 MODEL JAAIVD010000003 pseudo 625919247 Aftph aftiphilin ENCODES a protein that exhibits clathrin binding (ortholog); FOUND IN AP-1 adaptor complex (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 11 88922688 88974928 - 30032202 116912857 MODEL JAAIVD010000006;XM_032917071 XP_032772962 protein-coding 625919261 Slc13a5 solute carrier family 13 member 5 ENCODES a protein that exhibits citrate transmembrane transporter activity (ortholog); identical protein binding (ortholog); organic acid:sodium symporter activity (ortholog); INVOLVED IN alpha-ketoglutarate transport (ortholog); cellular response to lithium ion (ortholog); citrate transport (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 25 (ortholog); Developmental Disabilities (ortholog); generalized epilepsy (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) 9 43245139 43269237 + 22301074;30032202 116910123 MODEL JAAIVD010000002;XM_032913957 XP_032769848 protein-coding 625919277 LOC116893427 vomeronasal type-2 receptor 116-like 2 175272005 175290527 - 116893427 MODEL JAAIVD010000001 pseudo 625919278 Dnai7 dynein axonemal intermediate chain 7 ENCODES a protein that exhibits beta-tubulin binding (ortholog); microtubule binding (ortholog); ASSOCIATED WITH lung cancer (ortholog); Lung Neoplasms (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN axonemal dynein complex (ortholog); cilium (ortholog); cytoplasm (ortholog) 6 2935063 2972222 - 30032202 116903077 MODEL JAAIVD010000024;XM_032905395 XP_032761286 Casc1;Cfap94 cancer susceptibility 1;cilia and flagella associated protein 94;protein CASC1 protein-coding 625919298 Plpbp pyridoxal phosphate binding protein ASSOCIATED WITH early-onset vitamin B6-dependent epilepsy 1 (ortholog); genetic disease (ortholog); pyridoxine-dependent epilepsy (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) 13 59462768 59475557 - 22301074;30032202 116914621 MODEL JAAIVD010000008;XM_032918985 XP_032774876 pyridoxal phosphate homeostasis protein protein-coding 625919310 Arl8a ARF like GTPase 8A ENCODES a protein that exhibits GTP binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); midbody (ortholog); spindle midzone (ortholog) 10 553836 562840 - 22301074;30032202 116911204 MODEL JAAIVD010000005;XM_032915079 XP_032770970 ADP ribosylation factor like GTPase 8A;ADP-ribosylation factor-like protein 8A protein-coding 625919321 Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 ENCODES a protein that exhibits formate-tetrahydrofolate ligase activity (ortholog); methenyltetrahydrofolate cyclohydrolase activity (ortholog); methylenetetrahydrofolate dehydrogenase (NADP+) activity (ortholog); INVOLVED IN 10-formyltetrahydrofolate biosynthetic process (ortholog); folic acid metabolic process (ortholog); heart development (ortholog); PARTICIPATES IN altered folate cycle metabolic pathway; altered folate mediated one-carbon metabolic pathway; folate cycle metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); cleft lip (ortholog); cleft palate (ortholog); FOUND IN cytosol (ortholog) 7 90415997 90482610 + 22301074;30032202 116905180 MODEL JAAIVD010000026;XM_032907964 XP_032763855 C-1-tetrahydrofolate synthase, cytoplasmic protein-coding 625919353 Jmjd1c jumonji domain containing 1C ENCODES a protein that exhibits histone H3K9 demethylase activity (ortholog); protein demethylase activity (ortholog); INVOLVED IN epithelial cell morphogenesis (ortholog); lipid biosynthetic process (ortholog); maintenance of cell number (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN nucleus (ortholog) 18 19565623 19695218 - 30032202 116887673 MODEL JAAIVD010000013;XM_032889267 XP_032745158 probable JmjC domain-containing histone demethylation protein 2C protein-coding 625919383 Igsf9 immunoglobulin superfamily member 9 ENCODES a protein that exhibits cell-cell adhesion mediator activity (ortholog); INVOLVED IN dendrite development (ortholog); homophilic cell-cell adhesion (ortholog); regulation of synapse maturation (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) 10 51602520 51617302 + 22301074;30032202 116911051 MODEL JAAIVD010000005;XM_032914804 XP_032770695 protein turtle homolog A protein-coding 625919407 Fam107a family with sequence similarity 107 member A INVOLVED IN actin filament bundle assembly (ortholog); actin filament polymerization (ortholog); cellular response to glucocorticoid stimulus (ortholog); ASSOCIATED WITH high grade glioma (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); focal adhesion (ortholog) 12 78701274 78722316 - 30032202 116913653 MODEL JAAIVD010000007;XM_032917922;XM_032917923;XM_032917924 XP_032773813;XP_032773814;XP_032773815 actin-associated protein FAM107A protein-coding 625919421 Rhpn1 rhophilin Rho GTPase binding protein 1 INVOLVED IN focal adhesion assembly (ortholog); glomerular filtration (ortholog); kidney development (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN cell periphery (ortholog); plasma membrane (ortholog) 1 248023649 248034566 + 22301074;30032202 116912825 MODEL JAAIVD010000025;XM_032917010 XP_032772901 rhophilin-1 protein-coding 625919440 LOC116900897 olfactory receptor 4A16-like 5 71327513 71328502 - 22301074 116900897 MODEL JAAIVD010000023;XM_032902569 XP_032758460 protein-coding 625919443 Plac1 placenta enriched 1 INVOLVED IN placenta development (ortholog); spongiotrophoblast layer developmental growth (ortholog) X 116135778 116176819 + 116889251 MODEL JAAIVD010000014;XM_032890402 XP_032746293 placenta-specific protein 1 protein-coding 625919450 Lif LIF interleukin 6 family cytokine ENCODES a protein that exhibits cytokine activity (ortholog); growth factor activity (ortholog); leukemia inhibitory factor receptor binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); astrocyte differentiation (ortholog); blood vessel remodeling (ortholog); ASSOCIATED WITH brain ischemia (ortholog); Cardiomegaly (ortholog); colon cancer (ortholog); FOUND IN cytosol (ortholog); extracellular region (ortholog) 11 73242741 73252100 + 22301074;30032202 116912593 MODEL JAAIVD010000006;XM_032916713;XR_004389471 XP_032772604 leukemia inhibitory factor protein-coding 625919461 Senp1 SUMO specific peptidase 1 ENCODES a protein that exhibits deSUMOylase activity (ortholog); SUMO-specific endopeptidase activity (ortholog); INVOLVED IN negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); protein desumoylation (ortholog); ASSOCIATED WITH arteriosclerosis (ortholog); Neointima (ortholog); Primary Graft Dysfunction (ortholog); FOUND IN glutamatergic synapse (ortholog); nucleoplasm (ortholog); postsynaptic cytosol (ortholog) 1 270851896 270906130 - 30032202 116884624 MODEL JAAIVD010000025;XM_032885767;XM_032885774;XM_032885780;XM_032885790;XM_032885798;XM_032885807;XM_032885813;XM_032885821 XP_032741658;XP_032741665;XP_032741671;XP_032741681;XP_032741689;XP_032741698;XP_032741704;XP_032741712 sentrin-specific protease 1 protein-coding 625919499 LOC116891992 periphilin-1-like 2 14400974 14406418 - 30032202 116891992 MODEL JAAIVD010000001;XM_032893446 XP_032749337 protein-coding 625919503 Fbxl14 F-box and leucine rich repeat protein 14 ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytoplasm (ortholog) 6 27274926 27278248 - 22301074;30032202 116903341 MODEL JAAIVD010000024;XM_032905795;XM_032905797 XP_032761686;XP_032761688 F-box/LRR-repeat protein 14 protein-coding 625919512 Ppp1r3c protein phosphatase 1 regulatory subunit 3C ENCODES a protein that exhibits [phosphorylase] phosphatase activity (ortholog); enzyme binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN glycogen biosynthetic process (ortholog); glycogen metabolic process (ortholog); regulation of glycogen biosynthetic process (ortholog); PARTICIPATES IN glycogen biosynthetic pathway; glycogen degradation pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); prostate cancer (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN cytosol (ortholog); glycogen granule (ortholog) 2 37072510 37077774 + 30032202 116891138 MODEL JAAIVD010000001;XM_032891875 XP_032747766 protein-coding 625919518 Rab32 RAB32, member RAS oncogene family ENCODES a protein that exhibits AP-1 adaptor complex binding (ortholog); AP-2 adaptor complex binding (ortholog); AP-3 adaptor complex binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); endosome to melanosome transport (ortholog); melanosome assembly (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); Experimental Liver Cirrhosis (ortholog); human immunodeficiency virus infectious disease (ortholog); FOUND IN early endosome (ortholog); early endosome lumen (ortholog); endoplasmic reticulum (ortholog) 2 226591376 226607619 + 22301074;30032202 116893023 MODEL JAAIVD010000001;XM_032894984 XP_032750875 ras-related protein Rab-32 protein-coding 625919525 Ankrd13b ankyrin repeat domain 13B ENCODES a protein that exhibits ubiquitin-modified protein reader activity (ortholog); INVOLVED IN negative regulation of receptor internalization (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); late endosome (ortholog) 9 96141930 96160536 - 22301074;30032202 116908536 MODEL JAAIVD010000002;XM_032911727;XM_032911729;XM_032911730;XM_032911731 XP_032767618;XP_032767620;XP_032767621;XP_032767622 ankyrin repeat domain-containing protein 13B protein-coding 625919553 Lpcat4 lysophosphatidylcholine acyltransferase 4 ENCODES a protein that exhibits 1-acylglycerophosphocholine O-acyltransferase activity (ortholog); 1-acylglycerophosphoethanolamine O-acyltransferase activity (ortholog); 1-acylglycerophosphoserine O-acyltransferase activity (ortholog); INVOLVED IN phosphatidylcholine acyl-chain remodeling (ortholog); phosphatidylethanolamine acyl-chain remodeling (ortholog); phosphatidylserine acyl-chain remodeling (ortholog); FOUND IN endoplasmic reticulum (ortholog) 5 90564635 90572784 + 30032202 116901739 MODEL JAAIVD010000023;XM_032903875 XP_032759766 lysophospholipid acyltransferase LPCAT4 protein-coding 625919571 LOC116906416 small nucleolar RNA SNORD53/SNORD92 7 21583617 21583705 - 116906416 MODEL JAAIVD010000026;XR_004388678 snorna 625919574 LOC116892695 uncharacterized LOC116892695 2 178013074 178026298 - 116892695 MODEL JAAIVD010000001;XR_004386963;XR_004386964;XR_004386965 ncrna 625919585 Asic2 acid sensing ion channel subunit 2 ENCODES a protein that exhibits ligand-gated sodium channel activity (ortholog); monoatomic cation channel activity (ortholog); monoatomic ion channel activity (ortholog); INVOLVED IN cellular response to acidic pH (ortholog); cellular response to xenobiotic stimulus (ortholog); detection of mechanical stimulus involved in sensory perception (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Inflammation (ortholog); prostate cancer (ortholog); FOUND IN dendritic spine (ortholog); membrane (ortholog); neuron projection (ortholog) 9 88499143 89558361 + 22301074;30032202 116909065 MODEL JAAIVD010000002;XM_032912542;XM_032912543 XP_032768433;XP_032768434 acid-sensing ion channel 2 protein-coding 625919602 LOC116892409 zinc finger protein 60-like 2 167951080 167972347 + 22301074 116892409 MODEL JAAIVD010000001;XM_032894088;XM_032894089 XP_032749979;XP_032749980 protein-coding 625919613 Itih5 inter-alpha-trypsin inhibitor heavy chain 5 INVOLVED IN uterus development (ortholog); ASSOCIATED WITH prostate cancer (ortholog) 14 16246584 16345103 + 22301074 116883640 MODEL JAAIVD010000009;XM_032884829 XP_032740720 inter-alpha-trypsin inhibitor heavy chain H5 protein-coding 625919631 LOC116905694 transformer-2 protein homolog alpha-like 7 58378843 58379526 - 116905694 MODEL JAAIVD010000026 pseudo 625919632 LOC116895857 eukaryotic translation initiation factor 5-like 3 91940561 91959175 + 30032202 116895857 MODEL JAAIVD010000012;XM_032896962 XP_032752853 protein-coding 625919638 LOC116906309 U6 spliceosomal RNA 7 56794854 56794960 - 116906309 MODEL JAAIVD010000026;XR_004388597 snrna 625919641 Oard1 O-acyl-ADP-ribose deacylase 1 ENCODES a protein that exhibits ADP-ribosylglutamate hydrolase activity (ortholog); O-acetyl-ADP-ribose deacetylase activity (ortholog); purine nucleoside binding (ortholog); INVOLVED IN DNA damage response (ortholog); peptidyl-glutamate ADP-deribosylation (ortholog); protein de-ADP-ribosylation (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); site of DNA damage (ortholog) 4 81509705 81517220 - 30032202 116899068 MODEL JAAIVD010000003;XM_032900545;XM_032900546;XM_032900547;XM_032900548;XM_032900549;XM_032900550;XM_032900551 XP_032756436;XP_032756437;XP_032756438;XP_032756439;XP_032756440;XP_032756441;XP_032756442 ADP-ribose glycohydrolase OARD1 protein-coding 625919667 LOC116884860 protein SET-like 15 40192937 40199889 - 116884860 MODEL JAAIVD010000010 pseudo 625919668 LOC116911786 transmembrane epididymal protein 1 10 33319707 33320965 + 116911786 MODEL JAAIVD010000005;XM_032915781 XP_032771672 protein-coding 625919672 Pds5a PDS5 cohesin associated factor A INVOLVED IN anterior/posterior pattern specification (ortholog); heart morphogenesis (ortholog); lens development in camera-type eye (ortholog); ASSOCIATED WITH Cornelia de Lange syndrome (ortholog); Neurodevelopmental Disorders (ortholog); Prostatic Neoplasms (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog) 11 22661927 22753151 - 30032202 116912814 MODEL JAAIVD010000006;XM_032916982 XP_032772873 sister chromatid cohesion protein PDS5 homolog A protein-coding 625919707 LOC116898207 gamma-crystallin D 4 138953057 138954666 - 30032202 116898207 MODEL JAAIVD010000003;XM_032899566;XM_032899567 XP_032755457;XP_032755458 protein-coding 625919717 LOC116912361 vomeronasal type-2 receptor 116-like 11 19360067 19369691 + 22301074;30032202 116912361 MODEL JAAIVD010000006;XM_032916418;XM_032916419;XM_032916421 XP_032772309;XP_032772310;XP_032772312 protein-coding 625919730 LOC116905569 E3 ubiquitin-protein ligase RNF138-like 7 91778162 91784007 - 116905569 MODEL JAAIVD010000026 pseudo 625919731 Itgb3bp integrin subunit beta 3 binding protein INVOLVED IN negative regulation of epithelial cell apoptotic process (ortholog); positive regulation of epithelial cell proliferation (ortholog); ASSOCIATED WITH endometriosis (ortholog); intellectual disability (ortholog); FOUND IN kinetochore (ortholog); nucleoplasm (ortholog) 1 54700414 54759248 + 22301074;30032202 116899809 MODEL JAAIVD010000025;XM_032901778;XM_032901779;XM_032901780 XP_032757669;XP_032757670;XP_032757671 centromere protein R protein-coding 625919750 LOC116884392 translation initiation factor IF-2-like 15 58291976 58293090 - 116884392 MODEL JAAIVD010000010;XM_032885500 XP_032741391 protein-coding 625919754 Rpusd2 RNA pseudouridine synthase domain containing 2 ENCODES a protein that exhibits pseudouridine synthase activity (ortholog); INVOLVED IN mRNA pseudouridine synthesis (ortholog) 5 97207430 97212998 + 22301074 116901793 MODEL JAAIVD010000023;XM_032903947 XP_032759838 RNA pseudouridylate synthase domain-containing protein 2 protein-coding 625919761 Plxna1 plexin A1 ENCODES a protein that exhibits semaphorin receptor activity (ortholog); INVOLVED IN dichotomous subdivision of terminal units involved in salivary gland branching (ortholog); gonadotrophin-releasing hormone neuronal migration to the hypothalamus (ortholog); neuron projection extension (ortholog); ASSOCIATED WITH DWORSCHAK-PUNETHA NEURODEVELOPMENTAL SYNDROME (ortholog); epilepsy (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN glutamatergic synapse (ortholog); membrane (ortholog); plasma membrane (ortholog) 6 57017384 57058256 + 22301074;30032202 116903514 MODEL JAAIVD010000024;XM_032906119 XP_032762010 plexin-A1 protein-coding 625919796 Dusp18 dual specificity phosphatase 18 ENCODES a protein that exhibits phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); protein tyrosine/serine/threonine phosphatase activity (ortholog); INVOLVED IN dephosphorylation (ortholog); negative regulation of bone resorption (ortholog); peptidyl-threonine dephosphorylation (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 11 72905677 72927454 + 22301074 116912070 MODEL JAAIVD010000006;XM_032915934;XM_032915935;XR_004389420;XR_004389421 XP_032771825;XP_032771826 dual specificity protein phosphatase 18 protein-coding 625919812 Eif3d eukaryotic translation initiation factor 3 subunit D ENCODES a protein that exhibits mRNA cap binding (ortholog); RNA binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN cap-dependent translational initiation (ortholog); formation of cytoplasmic translation initiation complex (ortholog); IRES-dependent viral translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH pre-eclampsia (ortholog); FOUND IN cytosol (ortholog); eukaryotic translation initiation factor 3 complex (ortholog); eukaryotic translation initiation factor 3 complex, eIF3m (ortholog) 10 82900650 82902226 + 22301074;30032202 116911771 MODEL JAAIVD010000005;XM_032915764 XP_032771655 protein-coding 625919815 Mcfd2 multiple coagulation factor deficiency 2, ER cargo receptor complex subunit INVOLVED IN carboxylic acid metabolic process (ortholog); gene expression (ortholog); ASSOCIATED WITH Factor V and Factor VIII, Combined Deficiency of, 2 (ortholog); Familial Multiple Coagulation Factor Deficiency I (ortholog); hemorrhagic disease (ortholog); FOUND IN endoplasmic reticulum-Golgi intermediate compartment membrane (ortholog); extracellular region (ortholog) 7 5710038 5721777 + 22301074 116905750 MODEL JAAIVD010000026;XM_032908719 XP_032764610 multiple coagulation factor deficiency protein 2 protein-coding 625919823 Msi2 musashi RNA binding protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); poly(U) RNA binding (ortholog); single-stranded RNA binding (ortholog); INVOLVED IN stem cell development (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 9 82094498 82459708 + 22301074;30032202 116908744 MODEL JAAIVD010000002;XM_032912093;XM_032912094;XM_032912095 XP_032767984;XP_032767985;XP_032767986 RNA-binding protein Musashi homolog 2 protein-coding 625919849 Upk2 uroplakin 2 INVOLVED IN epithelial cell differentiation (ortholog); ASSOCIATED WITH Hematuria (ortholog); FOUND IN apical plasma membrane (ortholog); apical plasma membrane urothelial plaque (ortholog) 8 38997320 38998793 - 30032202 116907292 MODEL JAAIVD010000027;XM_032910242 XP_032766133 uroplakin-2 protein-coding 625919857 Meiosin meiosis initiator INVOLVED IN activation of meiosis (ortholog); cellular response to retinoic acid (ortholog); meiotic cell cycle (ortholog); FOUND IN nucleus (ortholog) 2 171505839 171525772 + 22301074 116892551 MODEL JAAIVD010000001;XM_032894323;XM_032894324 XP_032750214;XP_032750215 Bhmg1 basic helix-loop-helix and HMG box domain-containing protein 1;basic helix-loop-helix and HMG-box containing 1 protein-coding 625919875 Pdp2 pyruvate dehyrogenase phosphatase catalytic subunit 2 ENCODES a protein that exhibits [pyruvate dehydrogenase (acetyl-transferring)]-phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN peptidyl-threonine dephosphorylation (ortholog); response to starvation (ortholog); T-helper cell differentiation (ortholog); PARTICIPATES IN pyruvate metabolic pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); prostate cancer (ortholog); FOUND IN mitochondrion (ortholog) 17 12862061 12867575 + 22301074;30032202 116886417 MODEL JAAIVD010000011;XM_032887897;XM_032887898 XP_032743788;XP_032743789 pyruvate dehydrogenase [acetyl-transferring]-phosphatase 2, mitochondrial protein-coding 625919883 Ldlrad1 low density lipoprotein receptor class A domain containing 1 1 47592679 47601549 - 22301074 116890663 MODEL JAAIVD010000025;XM_032891103 XP_032746994 low-density lipoprotein receptor class A domain-containing protein 1 protein-coding 625919892 LOC116910885 SLC35A4 upstream open reading frame protein-like 10 85169241 85169552 + 116910885 MODEL JAAIVD010000005;XM_032914657 XP_032770548 protein-coding 625919895 LOC116902715 proteasome subunit beta type-3-like 6 51962967 51963586 + 116902715 MODEL JAAIVD010000024 pseudo 625919896 LOC116889912 olfactory receptor 6C6-like 1 160438742 160439701 + 22301074;30032202 116889912 MODEL JAAIVD010000025;XM_032890731 XP_032746622 protein-coding 625919899 LOC116885685 60S ribosomal protein L29-like 16 7401888 7402496 + 116885685 MODEL JAAIVD010000004 pseudo 625919900 Ppid peptidylprolyl isomerase D ENCODES a protein that exhibits cyclosporin A binding (ortholog); enzyme binding (ortholog); heat shock protein binding (ortholog); INVOLVED IN cellular response to UV-A (ortholog); lipid droplet organization (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN estrogen signaling pathway; ASSOCIATED WITH brain ischemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) 3 73801145 73813574 - 22301074 116896763 MODEL JAAIVD010000012;XM_032898212 XP_032754103 peptidyl-prolyl cis-trans isomerase D protein-coding 625919914 Pdgfrl platelet derived growth factor receptor like ASSOCIATED WITH colon carcinoma (ortholog); colorectal cancer (ortholog); Colorectal Neoplasms (ortholog) 13 46571758 46615364 - 116914329 MODEL JAAIVD010000008;XM_032918554 XP_032774445 platelet-derived growth factor receptor-like protein protein-coding 625919923 Syce3 synaptonemal complex central element protein 3 INVOLVED IN positive regulation of apoptotic process (ortholog); reciprocal meiotic recombination (ortholog); spermatogenesis (ortholog); FOUND IN central element (ortholog); chromosome (ortholog); nucleus (ortholog) 1 258689465 258714802 - 22301074;30032202 116890175 MODEL JAAIVD010000025;XM_032890909 XP_032746800 protein-coding 625919930 Pla2g4f phospholipase A2 group IVF ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); obsolete calcium-dependent phospholipase A2 activity (ortholog); phosphatidylcholine lysophospholipase A1 activity (ortholog); INVOLVED IN arachidonate secretion (ortholog); cellular response to antibiotic (ortholog); fatty acid transport (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); ruffle membrane (ortholog) 5 98432339 98447539 - 22301074;30032202 116901830 MODEL JAAIVD010000023;XM_032903994 XP_032759885 cytosolic phospholipase A2 zeta protein-coding 625919954 Sqle squalene epoxidase ENCODES a protein that exhibits FAD binding (ortholog); squalene monooxygenase activity (ortholog); INVOLVED IN cholesterol biosynthetic process (ortholog); cholesterol biosynthetic process via desmosterol (ortholog); cholesterol biosynthetic process via lathosterol (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH cholelithiasis (ortholog); Experimental Liver Neoplasms (ortholog); Hypercholesterolemia (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) 1 233829246 233844950 + 22301074;30032202 116911959 MODEL JAAIVD010000025;XM_032915883 XP_032771774 squalene monooxygenase protein-coding 625919969 LOC116897627 U6atac minor spliceosomal RNA 3 36419988 36420117 + 116897627 MODEL JAAIVD010000012;XR_004387607 snrna 625919972 LOC116890103 olfactory receptor 6C2-like 1 232613417 232614352 - 22301074;30032202 116890103 MODEL JAAIVD010000025;XM_032890850 XP_032746741 protein-coding 625919975 Ppl periplakin INVOLVED IN regulation of antibacterial peptide production (ortholog); response to mechanical stimulus (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cornified envelope (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) 9 16777183 16823684 + 22301074;30032202 116909083 MODEL JAAIVD010000002;XM_032912559 XP_032768450 protein-coding 625920001 Cdc42bpa CDC42 binding protein kinase alpha ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actomyosin structure organization (ortholog); cell migration (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN actomyosin (ortholog); cell leading edge (ortholog); cell-cell junction (ortholog) 10 58277303 58498187 + 22301074;30032202 116910880 MODEL JAAIVD010000005;XM_032914650 XP_032770541 serine/threonine-protein kinase MRCK alpha protein-coding 625920044 Pth1r parathyroid hormone 1 receptor ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); parathyroid hormone receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); bone mineralization (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; G protein mediated signaling pathway via Galphas family; parathyroid hormone signaling pathway; ASSOCIATED WITH brachydactyly type E1 (ortholog); chondrodysplasia Blomstrand type (ortholog); connective tissue disease (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); brush border membrane (ortholog) 8 101303428 101323999 - 22301074;30032202 116907770 MODEL JAAIVD010000027;XM_032910910 XP_032766801 parathyroid hormone/parathyroid hormone-related peptide receptor protein-coding 625920062 Nup153 nucleoporin 153 ENCODES a protein that exhibits chromatin binding (ortholog); double-stranded DNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN amyloid fibril formation (ortholog); negative regulation of RNA export from nucleus (ortholog); nuclear pore complex assembly (ortholog); PARTICIPATES IN mRNA nuclear export pathway; ASSOCIATED WITH Pulmonary Atresia (ortholog); FOUND IN annulate lamellae (ortholog); membrane (ortholog); nuclear envelope (ortholog) 14 65657637 65709976 - 30032202 116883856 MODEL JAAIVD010000009;XM_032885124 XP_032741015 nuclear pore complex protein Nup153 protein-coding 625920088 LOC116883848 calmodulin-like protein 3 14 18148798 18150151 - 22301074;30032202 116883848 MODEL JAAIVD010000009;XM_032885113 XP_032741004 protein-coding 625920093 Wdr44 WD repeat domain 44 ENCODES a protein that exhibits molecular sequestering activity (ortholog); small GTPase binding (ortholog); INVOLVED IN cytosolic ciliogenesis (ortholog); negative regulation of cilium assembly (ortholog); regulation of cell migration (ortholog); FOUND IN endosome membrane (ortholog); Golgi apparatus (ortholog); microtubule (ortholog) X 51124905 51227056 - 22301074 116888326 MODEL JAAIVD010000014;XM_032889598 XP_032745489 WD repeat-containing protein 44 protein-coding 625920117 LOC116902604 small nucleolar RNA SNORA17 5 49297575 49297702 - 116902604 MODEL JAAIVD010000023;XR_004388191 snorna 625920120 LOC116898117 keratinocyte-associated protein 2-like 4 104572535 104573023 + 116898117 MODEL JAAIVD010000003;XM_032899498 XP_032755389 protein-coding 625920125 Mrpl42 mitochondrial ribosomal protein L42 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrial small ribosomal subunit (ortholog); mitochondrion (ortholog) 1 174703169 174723584 - 30032202 116908472 MODEL JAAIVD010000025;XM_032911626;XM_032911635 XP_032767517;XP_032767526 39S ribosomal protein L42, mitochondrial protein-coding 625920138 C8H11orf65 chromosome 8 C11orf65 homolog INVOLVED IN negative regulation of mitochondrial fission (ortholog); negative regulation of protein localization to mitochondrion (ortholog); obsolete negative regulation of protein targeting to mitochondrion (ortholog); ASSOCIATED WITH ataxia telangiectasia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); mitochondrial outer membrane (ortholog) 8 47390754 47416326 + 116906820 MODEL JAAIVD010000027;XM_032909703 XP_032765594 uncharacterized protein C11orf65 homolog protein-coding 625920150 Rgs21 regulator of G protein signaling 21 INVOLVED IN sensory perception of bitter taste (ortholog); sensory perception of sweet taste (ortholog); sensory perception of umami taste (ortholog) 10 24381067 24404999 - 116911553 MODEL JAAIVD010000005;XM_032915542 XP_032771433 regulator of G-protein signaling 21 protein-coding 625920157 Tnfaip8l2 TNF alpha induced protein 8 like 2 INVOLVED IN negative regulation of inflammatory response (ortholog); negative regulation of T cell activation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog) 3 62107908 62110717 + 22301074;30032202 116896568 MODEL JAAIVD010000012;XM_032897777 XP_032753668 tumor necrosis factor alpha-induced protein 8-like protein 2 protein-coding 625920163 LOC116885987 U6 spliceosomal RNA 16 262904 263009 + 116885987 MODEL JAAIVD010000004;XR_004386063 snrna 625920166 LOC116894863 U6 spliceosomal RNA 2 28316020 28316126 + 116894863 MODEL JAAIVD010000001;XR_004387076 snrna 625920169 C9orf72 C9orf72-SMCR8 complex subunit ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN autophagosome-lysosome fusion (ortholog); autophagy (ortholog); axon extension (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); autism spectrum disorder (ortholog); autoimmune disease (ortholog); FOUND IN Atg1/ULK1 kinase complex (ortholog); autophagosome (ortholog); axonal growth cone (ortholog) 1 107608956 107633581 + 22301074;30032202 116902124 MODEL JAAIVD010000025;XM_032904445 XP_032760336 guanine nucleotide exchange C9orf72 homolog protein-coding 625920184 Ltv1 LTV1 ribosome biogenesis factor PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH inflammatory poikiloderma with hair abnormalities and acral keratoses (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 2 224001183 224015441 + 22301074;30032202 116893577 MODEL JAAIVD010000001;XM_032895282 XP_032751173 protein LTV1 homolog protein-coding 625920199 LOC116910975 regulator of nonsense transcripts 3B-like 10 89232205 89233815 + 116910975 MODEL JAAIVD010000005 pseudo 625920200 LOC116915164 U6 spliceosomal RNA 13 26627608 26627714 - 116915164 MODEL JAAIVD010000008;XR_004389826 snrna 625920203 Srm spermidine synthase ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); spermidine synthase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); response to testosterone (ortholog); spermidine biosynthetic process (ortholog); PARTICIPATES IN glycine N-methyltransferase deficiency pathway; homocystinuria pathway; hypermethioninemia pathway; ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); FOUND IN cytosol (ortholog) 1 12179957 12183141 - 30032202 116892772 MODEL JAAIVD010000025;XM_032894649 XP_032750540 protein-coding 625920215 LOC116901767 uncharacterized LOC116901767 5 94274531 94278784 + 116901767 MODEL JAAIVD010000023;XR_004388021 ncrna 625920221 Efemp2 EGF containing fibulin extracellular matrix protein 2 ENCODES a protein that exhibits heparin binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN aorta development (ortholog); aorta smooth muscle tissue morphogenesis (ortholog); artery development (ortholog); ASSOCIATED WITH aortic aneurysm (ortholog); aortic disease (ortholog); aortic dissection (ortholog); FOUND IN basement membrane (ortholog); elastic fiber (ortholog); extracellular matrix (ortholog) 2 2192188 2199927 - 22301074 116890713 MODEL JAAIVD010000001;XM_032891155;XM_032891156;XM_032891158;XM_032891159;XM_032891160 XP_032747046;XP_032747047;XP_032747049;XP_032747050;XP_032747051 EGF-containing fibulin-like extracellular matrix protein 2 protein-coding 625920249 LOC116895878 cyclin-D-binding Myb-like transcription factor 1 3 107674725 107676418 - 116895878 MODEL JAAIVD010000012 pseudo 625920250 Lsm6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated ENCODES a protein that exhibits protein heterodimerization activity (ortholog); INVOLVED IN mRNA catabolic process (ortholog); mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN cytoplasm (ortholog); Lsm2-8 complex (ortholog); nucleus (ortholog) 17 21275730 21289451 + 22301074;30032202 116886381 MODEL JAAIVD010000011;XM_032887847;XM_032887848 XP_032743738;XP_032743739 U6 snRNA-associated Sm-like protein LSm6 protein-coding 625920262 LOC116906021 cytochrome c oxidase subunit 7B, mitochondrial-like 7 24771955 24772199 - 116906021 MODEL JAAIVD010000026 pseudo 625920263 Pnpla1 patatin like domain 1, omega-hydroxyceramide transacylase ENCODES a protein that exhibits acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); omega-hydroxyceramide transacylase activity (ortholog); structural constituent of skin epidermis (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); establishment of skin barrier (ortholog); keratinocyte differentiation (ortholog); ASSOCIATED WITH autosomal recessive congenital ichthyosis (ortholog); autosomal recessive congenital ichthyosis 10 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog) 18 4973968 5006800 - 30032202 116887574 MODEL JAAIVD010000013;XM_032889194 XP_032745085 patatin like phospholipase domain containing 1;patatin-like phospholipase domain-containing protein 1 protein-coding 625920274 LOC116889244 cyclic nucleotide-gated cation channel alpha-4-like 1 126043494 126044269 - 116889244 MODEL JAAIVD010000025 pseudo 625920275 LOC116885832 60S ribosomal protein L7-like 16 31075346 31076228 - 116885832 MODEL JAAIVD010000004 pseudo 625920276 Lrrn2 leucine rich repeat neuronal 2 10 2908393 2911533 - 22301074 116911122 MODEL JAAIVD010000005;XM_032914968 XP_032770859 leucine-rich repeat neuronal protein 2 protein-coding 625920281 Rbpms RNA binding protein, mRNA processing factor ENCODES a protein that exhibits identical protein binding (ortholog); molecular adaptor activity (ortholog); mRNA 3'-UTR binding (ortholog); INVOLVED IN protein-containing complex assembly (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); response to oxidative stress (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) 13 53080287 53221209 + 30032202 116914782 MODEL JAAIVD010000008;XM_032919231;XM_032919232 XP_032775122;XP_032775123 RNA-binding protein with multiple splicing protein-coding 625920297 Rnf126 ring finger protein 126 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN cytoplasm protein quality control by the ubiquitin-proteasome system (ortholog); negative regulation of epidermal growth factor receptor signaling pathway (ortholog); positive regulation of double-strand break repair via homologous recombination (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 1 155106833 155114260 + 22301074;30032202 116905637 MODEL JAAIVD010000025;XM_032908617;XM_032908622;XM_032908626 XP_032764508;XP_032764513;XP_032764517 E3 ubiquitin-protein ligase RNF126 protein-coding 625920318 Znf277 zinc finger protein 277 7 53547124 53601201 - 116906065 MODEL JAAIVD010000026;XM_032909101 XP_032764992 protein-coding 625920333 Cd34 CD34 molecule ENCODES a protein that exhibits carbohydrate binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); sulfate binding (ortholog); INVOLVED IN cell motility (ortholog); cell-cell adhesion (ortholog); endothelial cell proliferation (ortholog); ASSOCIATED WITH diabetic retinopathy (ortholog); hepatocellular carcinoma (ortholog); Neoplastic Cell Transformation (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); cell periphery (ortholog) 10 72888429 72908160 + 22301074;30032202 116911401 MODEL JAAIVD010000005;XM_032915361;XM_032915362 XP_032771252;XP_032771253 hematopoietic progenitor cell antigen CD34 protein-coding 625920348 Azin2 antizyme inhibitor 2 ENCODES a protein that exhibits ornithine decarboxylase activator activity (ortholog); INVOLVED IN negative regulation of protein catabolic process (ortholog); ornithine metabolic process (ortholog); positive regulation of catalytic activity (ortholog); FOUND IN axon (ortholog); cis-Golgi network (ortholog); cytoplasmic vesicle (ortholog) 1 29172803 29200033 + 22301074;30032202 116896325 MODEL JAAIVD010000025;XM_032897423 XP_032753314 protein-coding 625920363 LOC116902561 small nucleolar RNA SNORA48 5 42517021 42517160 + 116902561 MODEL JAAIVD010000023;XR_004388158 snorna 625920366 LOC116889109 probable G-protein coupled receptor 83 X 55550391 55558669 - 22301074;30032202 116889109 MODEL JAAIVD010000014;XM_032890275 XP_032746166 protein-coding 625920375 Cep164 centrosomal protein 164 INVOLVED IN cilium assembly (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN 9+2 motile cilium (ortholog); apical part of cell (ortholog); centriole (ortholog) 8 40296773 40360360 - 22301074 116906687 MODEL JAAIVD010000027;XM_032909478 XP_032765369 centrosomal protein of 164 kDa protein-coding 625920411 LOC116893612 mas-related G-protein coupled receptor member G-like 2 5953157 5956595 + 22301074;30032202 116893612 MODEL JAAIVD010000001;XM_032895320 XP_032751211 protein-coding 625920417 Nudt22 nudix hydrolase 22 ENCODES a protein that exhibits UDP-sugar diphosphatase activity (ortholog); FOUND IN nucleoplasm (ortholog) 2 799605 803509 + 30032202 116894808 MODEL JAAIVD010000001;XM_032896473;XM_032896474 XP_032752364;XP_032752365 uridine diphosphate glucose pyrophosphatase NUDT22 protein-coding 625920430 LOC116898220 40S ribosomal protein S18-like 1 95973482 95973993 + 116898220 MODEL JAAIVD010000025 pseudo 625920431 LOC116886867 uncharacterized LOC116886867 1 26823814 26825151 + 116886867 MODEL JAAIVD010000025;XR_004386191 ncrna 625920436 LOC116893664 olfactory receptor 10V1-like 2 11948253 11949209 - 22301074 116893664 MODEL JAAIVD010000001;XM_032895381 XP_032751272 protein-coding 625920439 Sema3g semaphorin 3G ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN negative regulation of axon extension (ortholog) 13 6920667 6931605 + 30032202 116914724 MODEL JAAIVD010000008;XM_032919154 XP_032775045 semaphorin-3G protein-coding 625920458 LOC116901456 uncharacterized LOC116901456 5 40635652 40657727 - 116901456 MODEL JAAIVD010000023;XR_004387996 ncrna 625920463 LOC116895531 late cornified envelope protein 3D-like 3 120340911 120341207 + 22301074 116895531 MODEL JAAIVD010000012;XM_032896776 XP_032752667 protein-coding 625920466 LOC116913644 olfactory receptor 2T2 12 84151042 84152010 + 22301074 116913644 MODEL JAAIVD010000007;XM_032917912 XP_032773803 protein-coding 625920469 Med6 mediator complex subunit 6 ENCODES a protein that exhibits DNA binding (ortholog); transcription coactivator activity (ortholog); transcription coactivator binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); protein ubiquitination (ortholog); stem cell population maintenance (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; FOUND IN mediator complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 7 95764070 95777807 - 22301074;30032202 116905239 MODEL JAAIVD010000026;XM_032908063;XM_032908064 XP_032763954;XP_032763955 mediator of RNA polymerase II transcription subunit 6 protein-coding 625920485 Naa50 N-alpha-acetyltransferase 50, NatE catalytic subunit ENCODES a protein that exhibits histone H4 acetyltransferase activity (ortholog); protein-lysine-acetyltransferase activity (ortholog); protein-N-terminal amino-acid acetyltransferase activity (ortholog); INVOLVED IN establishment of mitotic sister chromatid cohesion (ortholog); mitotic sister chromatid cohesion, centromeric (ortholog); N-terminal protein amino acid acetylation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); NatA complex (ortholog) 4 29033346 29052285 + 22301074;30032202 116898860 MODEL JAAIVD010000003;XM_032900225;XM_032900226 XP_032756116;XP_032756117 N-alpha-acetyltransferase 50 protein-coding 625920498 Disp3 dispatched RND transporter family member 3 INVOLVED IN negative regulation of neuron differentiation (ortholog); positive regulation of lipid metabolic process (ortholog); positive regulation of neural precursor cell proliferation (ortholog); FOUND IN cytoplasm (ortholog) 1 12485987 12534910 + 22301074 116892817 MODEL JAAIVD010000025;XM_032894703 XP_032750594 protein dispatched homolog 3 protein-coding 625920523 LOC116905942 membrane magnesium transporter 2 7 19221275 19223196 + 30032202 116905942 MODEL JAAIVD010000026;XM_032908936 XP_032764827 protein-coding 625920528 LOC116894743 twinkle protein, mitochondrial-like 2 114313163 114314245 - 116894743 MODEL JAAIVD010000001 pseudo 625920529 LOC116884404 60S acidic ribosomal protein P1-like 15 65716653 65724821 + 30032202 116884404 MODEL JAAIVD010000010;XM_032885506 XP_032741397 protein-coding 625920533 LOC116905334 low molecular weight phosphotyrosine protein phosphatase-like 7 104859994 104860850 - 116905334 MODEL JAAIVD010000026 pseudo 625920534 Nudt5 nudix hydrolase 5 ENCODES a protein that exhibits 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity (ortholog); 8-oxo-dGDP phosphatase activity (ortholog); ADP-ribose diphosphatase activity (ortholog); INVOLVED IN ATP generation from poly-ADP-D-ribose (ortholog); chromatin remodeling (ortholog); D-ribose catabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; FOUND IN nucleus (ortholog) 14 12170309 12183716 + 30032202 116883787 MODEL JAAIVD010000009;XM_032885030;XM_032885031 XP_032740921;XP_032740922 ADP-sugar pyrophosphatase protein-coding 625920550 LOC116915153 small nucleolar RNA U13 13 55763503 55763607 + 116915153 MODEL JAAIVD010000008;XR_004389821 snorna 625920553 Hdac5 histone deacetylase 5 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN cellular response to fluid shear stress (ortholog); cellular response to lipopolysaccharide (ortholog); heart development (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; histone modification pathway; ASSOCIATED WITH acute kidney failure (ortholog); adjustment disorder (ortholog); bipolar disorder (ortholog); FOUND IN axonal growth cone (ortholog); chromatin (ortholog); cytoplasm (ortholog) 9 61492692 61527424 - 22301074;30032202 116908677 MODEL JAAIVD010000002;XM_032911976;XM_032911977;XM_032911978;XM_032911979;XM_032911980;XM_032911981 XP_032767867;XP_032767868;XP_032767869;XP_032767870;XP_032767871;XP_032767872 protein-coding 625920598 Adam22 ADAM metallopeptidase domain 22 INVOLVED IN adult locomotory behavior (ortholog); gliogenesis (ortholog); myelination in peripheral nervous system (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 61 (ortholog); genetic disease (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); glutamatergic synapse (ortholog) 6 140062492 140283800 - 22301074;30032202 116904137 MODEL JAAIVD010000024;XM_032907027 XP_032762918 disintegrin and metalloproteinase domain-containing protein 22 protein-coding 625920634 Ddi1 DDI proteasomal shuttling factor 1 INVOLVED IN cellular response to hydroxyurea (ortholog); proteasomal protein catabolic process (ortholog); regulation of DNA stability (ortholog) 8 2930591 2932432 - 22301074 116907883 MODEL JAAIVD010000027;XM_032911071 XP_032766962 DNA damage inducible 1 homolog 1;protein DDI1 homolog 1 protein-coding 625920639 LOC116905734 non-specific lipid-transfer protein-like 7 73095847 73096350 - 116905734 MODEL JAAIVD010000026 pseudo 625920640 Slc38a3 solute carrier family 38 member 3 ENCODES a protein that exhibits L-alanine transmembrane transporter activity (ortholog); L-asparagine transmembrane transporter activity (ortholog); L-asparagine, sodium:proton antiporter activity (ortholog); INVOLVED IN asparagine transmembrane transport (ortholog); asparagine transport (ortholog); cellular response to potassium ion starvation (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 102 (ortholog); Dwarfism (ortholog); Endotoxemia (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); membrane (ortholog) 8 98968853 98985209 - 30032202 116907539 MODEL JAAIVD010000027;XM_032910558 XP_032766449 sodium-coupled neutral amino acid transporter 3 protein-coding 625920660 LOC116900142 olfactory receptor 1L4-like 5 14816580 14817503 + 22301074;30032202 116900142 MODEL JAAIVD010000023;XM_032901915 XP_032757806 protein-coding 625920663 LOC116894000 olfactory receptor 51I1 2 101609103 101610047 + 22301074 116894000 MODEL JAAIVD010000001;XM_032895716 XP_032751607 protein-coding 625920666 Ehbp1 EH domain binding protein 1 ASSOCIATED WITH myoepithelioma (ortholog); Prostate Cancer, Hereditary, 12 (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) 11 94504038 94759798 + 22301074 116912240 MODEL JAAIVD010000006;XM_032916220 XP_032772111 EH domain-binding protein 1 protein-coding 625920695 LOC116906193 FGFR1 oncogene partner 2 homolog 7 118281327 118283323 + 116906193 MODEL JAAIVD010000026 pseudo 625920696 Smarca4 SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent activity, acting on DNA (ortholog); ATP-dependent chromatin remodeler activity (ortholog); INVOLVED IN aorta development (ortholog); aortic smooth muscle cell differentiation (ortholog); blastocyst growth (ortholog); PARTICIPATES IN altered SWI/SNF family mediated chromatin remodeling pathway; cortisol signaling pathway; histone modification pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); atrial heart septal defect (ortholog); autistic disorder (ortholog); FOUND IN chromatin (ortholog); euchromatin (ortholog); fibrillar center (ortholog) 8 17885953 17977507 + 22301074;30032202 116907889 MODEL JAAIVD010000027;XM_032911078;XM_032911079;XM_032911080 XP_032766969;XP_032766970;XP_032766971 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4;transcription activator BRG1 protein-coding 625920741 Tbxa2r thromboxane A2 receptor ENCODES a protein that exhibits thromboxane receptor activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); inflammatory response (ortholog); negative regulation of cell migration involved in sprouting angiogenesis (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); aspirin-induced respiratory disease (ortholog); asthma (ortholog); FOUND IN acrosomal vesicle (ortholog); plasma membrane (ortholog) 1 153556812 153560110 - 30032202 116904393 MODEL JAAIVD010000025;XM_032907256 XP_032763147 protein-coding 625920747 Ivns1abp influenza virus NS1A binding protein INVOLVED IN negative regulation of intrinsic apoptotic signaling pathway (ortholog); negative regulation of protein ubiquitination (ortholog); response to virus (ortholog); ASSOCIATED WITH immunodeficiency 70 (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) 10 30772117 30791961 + 22301074 116910857 MODEL JAAIVD010000005;XM_032914616;XM_032914617;XM_032914618 XP_032770507;XP_032770508;XP_032770509 influenza virus NS1A-binding protein protein-coding 625920774 Znf804b zinc finger protein 804B 6 138942281 138952547 - 30032202 116902994 MODEL JAAIVD010000024;XM_032905309 XP_032761200 protein-coding 625920780 LOC116906225 uncharacterized LOC116906225 1 156019176 156020272 - 116906225 MODEL JAAIVD010000025;XR_004388586;XR_004388587 ncrna 625920788 Arid4a AT-rich interaction domain 4A ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN chromatin organization (ortholog); erythrocyte development (ortholog); establishment of Sertoli cell barrier (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); multiple myeloma (ortholog); Prostatic Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription repressor complex (ortholog) 7 84671304 84741045 + 30032202 116905138 MODEL JAAIVD010000026;XM_032907901 XP_032763792 AT-rich interactive domain-containing protein 4A protein-coding 625920815 Hepacam hepatic and glial cell adhesion molecule INVOLVED IN protein localization to cell-cell junction (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN astrocyte end-foot (ortholog); cell-cell junction (ortholog) 8 33550952 33567164 + 116907103 MODEL JAAIVD010000027;XM_032910070 XP_032765961 hepatocyte cell adhesion molecule protein-coding 625920826 Aars2 alanyl-tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits alanine-tRNA ligase activity (ortholog); peptide lactyltransferase (ATP-dependent) activity (ortholog); INVOLVED IN mitochondrial alanyl-tRNA aminoacylation (ortholog); negative regulation of cGAS/STING signaling pathway (ortholog); PARTICIPATES IN alanine metabolic pathway; lactic acidosis pathway; primary hyperoxaluria type 1 pathway; ASSOCIATED WITH combined oxidative phosphorylation deficiency (ortholog); combined oxidative phosphorylation deficiency 8 (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) 4 84375271 84386437 - 22301074;30032202 116899135 MODEL JAAIVD010000003;XM_032900669 XP_032756560 alanine--tRNA ligase, mitochondrial protein-coding 625920852 Dnm1 dynamin 1 ENCODES a protein that exhibits D2 dopamine receptor binding (ortholog); GDP binding (ortholog); GTPase activity (ortholog); INVOLVED IN clathrin coat assembly involved in endocytosis (ortholog); endocytosis (ortholog); endosome organization (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH Alzheimer's disease (ortholog); developmental and epileptic encephalopathy 1 (ortholog); developmental and epileptic encephalopathy 31A (ortholog); FOUND IN clathrin-coated pit (ortholog); clathrin-coated vesicle (ortholog); endocytic vesicle (ortholog) 5 3278385 3321380 + 22301074;30032202 116901148 MODEL JAAIVD010000023;XM_032902762;XM_032902763;XM_032902764;XM_032902765;XM_032902766;XM_032902767;XM_032902768;XM_032902769;XM_032902771;XM_032902772;XR_004387960;XR_004387961;XR_004387962 XP_032758653;XP_032758654;XP_032758655;XP_032758656;XP_032758657;XP_032758658;XP_032758659;XP_032758660;XP_032758662;XP_032758663 dynamin-1 protein-coding 625920904 LOC116889826 60S ribosomal protein L10-like 116889826 MODEL JAAIVD010001388 pseudo 625920905 LOC116911474 mucin-5AC-like 10 52494457 52508536 - 30032202 116911474 MODEL JAAIVD010000005;XM_032915457 XP_032771348 protein-coding 625920915 Emc3 ER membrane protein complex subunit 3 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); FOUND IN EMC complex (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) 6 33004471 33020539 + 22301074;30032202 116903406 MODEL JAAIVD010000024;XM_032905920 XP_032761811 protein-coding 625920927 LOC116885566 40S ribosomal protein S15a-like 16 23445073 23445539 - 116885566 MODEL JAAIVD010000004 pseudo 625920928 Prdm1 PR/SET domain 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); histone deacetylase binding (ortholog); histone methyltransferase binding (ortholog); INVOLVED IN aorta development (ortholog); artery morphogenesis (ortholog); cardiac septum development (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); Chronic Hepatitis B (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 18 44232039 44252505 - 22301074;30032202 116887375 MODEL JAAIVD010000013;XM_032888967;XM_032888968;XM_032888969;XM_032888970;XM_032888971 XP_032744858;XP_032744859;XP_032744860;XP_032744861;XP_032744862 PR domain zinc finger protein 1 protein-coding 625920949 Trnae-uuc transfer RNA glutamic acid (anticodon UUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 12 48251757 48251828 - 116914207 MODEL JAAIVD010000007 trna 625920950 Trnav-cac transfer RNA valine (anticodon CAC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 10 50269780 50269852 + 116911908 MODEL JAAIVD010000005 trna 625920951 Slc16a3 solute carrier family 16 member 3 ENCODES a protein that exhibits lactate transmembrane transporter activity (ortholog); lactate:proton symporter activity (ortholog); pyruvate transmembrane transporter activity (ortholog); INVOLVED IN lactate transmembrane transport (ortholog); plasma membrane lactate transport (ortholog); pyruvate catabolic process (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Stomach Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); lateral plasma membrane (ortholog) 9 63076666 63086608 - 22301074;30032202 116909837 MODEL JAAIVD010000002;XM_032913559;XM_032913560;XM_032913561 XP_032769450;XP_032769451;XP_032769452 monocarboxylate transporter 4 protein-coding 625920964 Lix1l limb and CNS expressed 1 like INVOLVED IN actin cytoskeleton organization (ortholog); gene expression (ortholog); mitral valve development (ortholog) 3 60682483 60706187 - 30032202 116896506 MODEL JAAIVD010000012;XM_032897685 XP_032753576 LIX1-like protein protein-coding 625920974 LOC116907259 methyl-CpG-binding domain protein 3-like 2B 8 14211821 14213446 - 116907259 MODEL JAAIVD010000027;XM_032910215 XP_032766106 protein-coding 625920978 Slc39a12 solute carrier family 39 member 12 ENCODES a protein that exhibits zinc ion transmembrane transporter activity (ortholog); INVOLVED IN positive regulation of sprouting angiogenesis (ortholog); regulation of microtubule polymerization (ortholog); regulation of neuron projection development (ortholog); ASSOCIATED WITH melanoma (ortholog); Pulmonary Hypertension, Hypoxia-Induced (ortholog); Right Ventricular Hypertrophy (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog) 14 9206878 9289578 - 22301074;30032202 116883678 MODEL JAAIVD010000009;XM_032884887;XM_032884888 XP_032740778;XP_032740779 zinc transporter ZIP12 protein-coding 625920995 Mrpl2 mitochondrial ribosomal protein L2 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 4 83213963 83217743 - 22301074;30032202 116899105 MODEL JAAIVD010000003;XM_032900622 XP_032756513 39S ribosomal protein L2, mitochondrial protein-coding 625921005 LOC116883869 prolactin-2C5-like 14 46940342 46948924 + 22301074;30032202 116883869 MODEL JAAIVD010000009;XM_032885134;XM_032885135 XP_032741025;XP_032741026 prolactin-2C2-like protein-coding 625921016 Slc44a2 solute carrier family 44 member 2 (CTL2 blood group) ENCODES a protein that exhibits choline transmembrane transporter activity (ortholog); ethanolamine transmembrane transporter activity (ortholog); INVOLVED IN choline transport (ortholog); ethanolamine transport (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog); plasma membrane (ortholog) 8 17591381 17626535 + 22301074;30032202 116906773 MODEL JAAIVD010000027;XM_032909619;XM_032909620 XP_032765510;XP_032765511 choline transporter-like protein 2 protein-coding 625921045 Slc6a7 solute carrier family 6 member 7 ENCODES a protein that exhibits L-proline transmembrane transporter activity (ortholog); proline:sodium symporter activity (ortholog); INVOLVED IN proline transmembrane transport (ortholog); proline transport (ortholog); protein catabolic process (ortholog); FOUND IN glutamatergic synapse (ortholog); presynaptic membrane (ortholog); Schaffer collateral - CA1 synapse (ortholog) 15 70933360 70953358 + 22301074;30032202 116884554 MODEL JAAIVD010000010;XM_032885692;XM_032885693;XM_032885694;XM_032885695 XP_032741583;XP_032741584;XP_032741585;XP_032741586 sodium-dependent proline transporter protein-coding 625921072 LOC116889907 60S ribosomal protein L5-like 1 160262872 160263756 - 116889907 MODEL JAAIVD010000025 pseudo 625921073 Plppr5 phospholipid phosphatase related 5 INVOLVED IN positive regulation of filopodium assembly (ortholog); positive regulation of neuron projection development (ortholog); FOUND IN plasma membrane (ortholog) 3 42068730 42175618 - 30032202 116896320 MODEL JAAIVD010000012;XM_032897415 XP_032753306 phospholipid phosphatase-related protein type 5 protein-coding 625921083 Calr calreticulin ENCODES a protein that exhibits calcium ion binding (ortholog); carbohydrate binding (ortholog); complement component C1q complex binding (ortholog); INVOLVED IN cardiac muscle cell differentiation (ortholog); cellular response to electrical stimulus (ortholog); cellular response to lithium ion (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Burkitt lymphoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog); cell surface (ortholog); cytoplasm (ortholog) 17 15444628 15449432 + 22301074;30032202 116886151 MODEL JAAIVD010000011;XM_032887511 XP_032743402 protein-coding 625921096 Trnal-cag transfer RNA leucine (anticodon CAG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 10 50215666 50215748 + 116911924 MODEL JAAIVD010000005 trna 625921097 Ndufc1 NADH:ubiquinone oxidoreductase subunit C1 FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) 3 103048931 103052815 + 22301074;30032202 116896891 MODEL JAAIVD010000012;XM_032898437;XM_032898438 XP_032754328;XP_032754329 NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial protein-coding 625921108 LOC116913862 heterogeneous nuclear ribonucleoprotein A1-like 12 2314031 2315364 - 116913862 MODEL JAAIVD010000007 pseudo 625921109 Farp2 FERM, ARH/RhoGEF and pleckstrin domain protein 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell adhesion (ortholog); hair cycle process (ortholog); ASSOCIATED WITH autistic disorder (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); chromosome 2q37 deletion syndrome (ortholog); FOUND IN cytoplasm (ortholog) 4 165446301 165552271 + 22301074;30032202 116899667 MODEL JAAIVD010000003;XM_032901682 XP_032757573 FERM, ARHGEF and pleckstrin domain-containing protein 2 protein-coding 625921140 Gpr31 G protein-coupled receptor 31 ENCODES a protein that exhibits arachidonate binding (ortholog); bioactive lipid receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); response to acidic pH (ortholog); FOUND IN plasma membrane (ortholog) 2 186668651 186669981 + 22301074 116894622 MODEL JAAIVD010000001;XM_032896338 XP_032752229 12-(S)-hydroxy-5,8,10,14-eicosatetraenoic acid receptor protein-coding 625921144 Spag1 sperm associated antigen 1 ASSOCIATED WITH autosomal dominant nocturnal frontal lobe epilepsy 5 (ortholog); Cohen syndrome (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 1 209709760 209769459 + 30032202 116910571 MODEL JAAIVD010000025;XM_032914494 XP_032770385 sperm-associated antigen 1 protein-coding 625921167 Zbbx zinc finger B-box domain containing 3 78707627 78799030 + 22301074;30032202 116896778 MODEL JAAIVD010000012;XM_032898239 XP_032754130 zinc finger B-box domain-containing protein 1 protein-coding 625921188 LOC116887411 40S ribosomal protein S13-like 1 41109278 41109771 + 116887411 MODEL JAAIVD010000025 pseudo 625921189 Mlf1 myeloid leukemia factor 1 ENCODES a protein that exhibits DNA binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN DNA-templated transcription (ortholog); myeloid progenitor cell differentiation (ortholog); regulation of cell cycle G1/S phase transition (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Stomach Neoplasms (ortholog); FOUND IN ciliary basal body (ortholog); ciliary base (ortholog); cilium (ortholog) 3 87821018 87854667 - 30032202 116895471 MODEL JAAIVD010000012;XM_032896733 XP_032752624 protein-coding 625921200 Klhl40 kelch like family member 40 INVOLVED IN negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); negative regulation of protein ubiquitination (ortholog); positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); nemaline myopathy 8 (ortholog); FOUND IN A band (ortholog); Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) 8 112937575 112943307 + 22301074;30032202 116907065 MODEL JAAIVD010000027;XM_032910020 XP_032765911 kelch-like protein 40 protein-coding 625921210 Irf4 interferon regulatory factor 4 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); defense response to protozoan (ortholog); myeloid dendritic cell differentiation (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); adult T-cell leukemia/lymphoma (ortholog); anaplastic large cell lymphoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleosome (ortholog) 14 49785990 49800081 + 22301074;30032202 116883661 MODEL JAAIVD010000009;XM_032884857;XM_032884858 XP_032740748;XP_032740749 protein-coding 625921223 Sned1 sushi, nidogen and EGF like domains 1 FOUND IN extracellular matrix (ortholog) 4 165167464 165227483 + 22301074;30032202 116899659 MODEL JAAIVD010000003;XM_032901670 XP_032757561 sushi, nidogen and EGF-like domain-containing protein 1 protein-coding 625921258 Cdhr1 cadherin related family member 1 INVOLVED IN photoreceptor cell maintenance (ortholog); photoreceptor cell morphogenesis (ortholog); photoreceptor cell outer segment organization (ortholog); ASSOCIATED WITH cone dystrophy (ortholog); cone-rod dystrophy (ortholog); cone-rod dystrophy 12 (ortholog); FOUND IN photoreceptor outer segment membrane (ortholog); plasma membrane (ortholog) 13 15550970 15570297 - 22301074;30032202 116914673 MODEL JAAIVD010000008;XM_032919080 XP_032774971 cadherin-related family member 1 protein-coding 625921279 LOC116915076 peptidyl-tRNA hydrolase 2, mitochondrial-like 13 43447195 43447750 + 116915076 MODEL JAAIVD010000008 pseudo 625921280 LOC116900102 cytochrome b-c1 complex subunit 10-like 5 17996818 17997010 + 116900102 MODEL JAAIVD010000023 pseudo 625921281 LOC116902916 60S ribosomal protein L30-like 1 121509735 121510114 + 116902916 MODEL JAAIVD010000025 pseudo 625921282 Tmem167a transmembrane protein 167A INVOLVED IN constitutive secretory pathway (ortholog); FOUND IN Golgi apparatus (ortholog) 3 206206264 206225244 - 30032202 116897309 MODEL JAAIVD010000012;XM_032899058 XP_032754949 protein kish-A protein-coding 625921290 Tchp trichoplein keratin filament binding INVOLVED IN apoptotic process (ortholog); negative regulation of cell growth (ortholog); negative regulation of cilium assembly (ortholog); FOUND IN apical cortex (ortholog); centrosome (ortholog); ciliary transition fiber (ortholog) 16 39229996 39245069 - 30032202 116885488 MODEL JAAIVD010000004;XM_032886779;XM_032886780 XP_032742670;XP_032742671 trichoplein keratin filament-binding protein protein-coding 625921310 Fgf21 fibroblast growth factor 21 INVOLVED IN cellular response to glucagon stimulus (ortholog); cellular response to glucose stimulus (ortholog); cellular response to low-density lipoprotein particle stimulus (ortholog); ASSOCIATED WITH atherosclerosis (ortholog); Cardiomegaly (ortholog); Carotid Atherosclerosis (ortholog); FOUND IN extracellular region (ortholog) 2 153906528 153908115 + 22301074;30032202 116892140 MODEL JAAIVD010000001;XM_032893629 XP_032749520 protein-coding 625921317 LOC116900481 olfactory receptor 4C45-like 5 71622427 71623359 + 22301074 116900481 MODEL JAAIVD010000023;XM_032902217 XP_032758108 protein-coding 625921321 Fchsd2 FCH and double SH3 domains 2 ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); INVOLVED IN clathrin-dependent endocytosis (ortholog); membrane organization (ortholog); positive regulation of actin filament polymerization (ortholog); ASSOCIATED WITH systemic juvenile rheumatoid arthritis (ortholog); FOUND IN clathrin-coated pit (ortholog); plasma membrane (ortholog); stereocilium shaft (ortholog) 2 99402461 99592293 + 22301074;30032202 116891753 MODEL JAAIVD010000001;XM_032893065;XM_032893066;XM_032893067 XP_032748956;XP_032748957;XP_032748958 F-BAR and double SH3 domains protein 2 protein-coding 625921352 Noxred1 NADP dependent oxidoreductase domain containing 1 7 101315864 101335550 - 30032202 116905822 MODEL JAAIVD010000026;XM_032908790 XP_032764681 NADP-dependent oxidoreductase domain-containing protein 1 protein-coding 625921361 LOC116891107 interferon-induced protein with tetratricopeptide repeats 1 2 34241582 34250287 + 22301074;30032202 116891107 MODEL JAAIVD010000001;XM_032891821 XP_032747712 protein-coding 625921367 LOC116903184 killer cell lectin-like receptor 2 6 16987158 17010122 + 116903184 MODEL JAAIVD010000024;XM_032905556 XP_032761447 protein-coding 625921380 LOC116894549 GTP-binding nuclear protein Ran, testis-specific isoform 2 177698760 177699918 - 22301074;30032202 116894549 MODEL JAAIVD010000001;XM_032896258 XP_032752149 protein-coding 625921385 LOC116904619 olfactory receptor 6C74-like 6 30050729 30051661 + 22301074;30032202 116904619 MODEL JAAIVD010000024;XM_032907410 XP_032763301 protein-coding 625921388 Sema4f ssemaphorin 4F INVOLVED IN axon guidance (ortholog); negative regulation of axon extension (ortholog); retinal ganglion cell axon guidance (ortholog); ASSOCIATED WITH malignant mesothelioma (ortholog); FOUND IN endoplasmic reticulum (ortholog); glutamatergic synapse (ortholog); membrane (ortholog) 6 63293855 63321639 + 30032202 116903637 MODEL JAAIVD010000024;XM_032906301 XP_032762192 semaphorin-4F protein-coding 625921406 LOC116907153 inosine triphosphate pyrophosphatase-like 8 87127318 87131873 - 116907153 MODEL JAAIVD010000027 pseudo 625921407 Slc36a3 solute carrier family 36 member 3 9 37549269 37576359 - 30032202 116909572 MODEL JAAIVD010000002;XM_032913191 XP_032769082 proton-coupled amino acid transporter 3 protein-coding 625921422 Trappc10 trafficking protein particle complex subunit 10 INVOLVED IN intra-Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH agnathia-otocephaly complex (ortholog); Arsenic Poisoning (ortholog); intellectual disability (ortholog); FOUND IN TRAPP complex (ortholog) 18 1466414 1523430 - 30032202 116886851 MODEL JAAIVD010000013;XM_032888302 XP_032744193 trafficking protein particle complex 10 protein-coding 625921449 LOC116883894 Y-box-binding protein 1-like 14 33010062 33011486 - 116883894 MODEL JAAIVD010000009 pseudo 625921450 Znf207 zinc finger protein 207 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); mitotic sister chromatid segregation (ortholog); mitotic spindle assembly (ortholog); FOUND IN kinetochore (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 9 90011795 90033618 - 30032202 116910403 MODEL JAAIVD010000002;XM_032914242;XM_032914243;XM_032914244;XM_032914245;XM_032914246;XR_004389147;XR_004389148 XP_032770133;XP_032770134;XP_032770135;XP_032770136;XP_032770137 BUB3-interacting and GLEBS motif-containing protein ZNF207 protein-coding 625921481 LOC116910406 serine protease 41 9 1152702 1160505 - 22301074 116910406 MODEL JAAIVD010000002;XM_032914248 XP_032770139 protein-coding 625921490 Dnah3 dynein axonemal heavy chain 3 INVOLVED IN inner dynein arm assembly (ortholog); sperm axoneme assembly (ortholog); ASSOCIATED WITH intellectual disability (ortholog); prostate cancer (ortholog); spermatogenic failure 18 (ortholog); FOUND IN cytoplasm (ortholog); sperm flagellum (ortholog) 2 81588788 81758452 + 22301074;30032202 116891588 MODEL JAAIVD010000001;XM_032892767 XP_032748658 dynein heavy chain 3, axonemal protein-coding 625921554 LOC116906084 uncharacterized protein NKAPD1-like 7 67809398 67810307 - 116906084 MODEL JAAIVD010000026 pseudo 625921555 LOC116883178 glycosylation-dependent cell adhesion molecule 1 1 259529949 259532241 + 116883178 MODEL JAAIVD010000025;XM_032884223 XP_032740114 protein-coding 625921563 LOC116890317 U5 spliceosomal RNA 1 40817893 40818008 + 116890317 MODEL JAAIVD010000025;XR_004386541 snrna 625921566 LOC116896996 glutamic acid-rich protein-like 3 129672379 129695568 - 116896996 MODEL JAAIVD010000012 pseudo 625921567 LOC116908407 small nucleolar RNA SNORA17 8 74154902 74155033 - 116908407 MODEL JAAIVD010000027;XR_004388950 snorna 625921570 LOC116883213 PRELI domain-containing protein 1, mitochondrial-like 14 45244551 45245880 + 116883213 MODEL JAAIVD010000009 pseudo 625921571 Znf436 zinc finger protein 436 FOUND IN nucleoplasm (ortholog) 1 21937563 21948107 - 30032202 116894359 MODEL JAAIVD010000025;XM_032896064;XM_032896072;XM_032896080;XM_032896088;XM_032896094;XM_032896101 XP_032751955;XP_032751963;XP_032751971;XP_032751979;XP_032751985;XP_032751992 protein-coding 625921594 LOC116912703 igE-binding protein-like 11 19679422 19680025 - 22301074 116912703 MODEL JAAIVD010000006;XM_032916831 XP_032772722 protein-coding 625921597 Magohb mago homolog B, exon junction complex subunit INVOLVED IN mRNA splicing, via spliceosome (ortholog); nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH ovarian cyst (ortholog); FOUND IN exon-exon junction complex (ortholog); neuronal cell body (ortholog); nucleus (ortholog) 6 16935196 16943034 + 22301074;30032202 116903183 MODEL JAAIVD010000024;XM_032905554;XM_032905555 XP_032761445;XP_032761446 protein mago nashi homolog 2 protein-coding 625921610 LOC116901733 60S ribosomal protein L19-like 5 89015774 89016509 - 116901733 MODEL JAAIVD010000023 pseudo 625921611 LOC116890439 small nucleolar RNA SNORA72 1 208141123 208141254 - 116890439 MODEL JAAIVD010000025;XR_004386635 snorna 625921614 LOC116883349 F-box/WD repeat-containing protein 12-like 14 69217824 69235312 - 22301074 116883349 MODEL JAAIVD010000009;XM_032884429;XR_004385750;XR_004385751 XP_032740320 protein-coding 625921632 Sf3b3 splicing factor 3b subunit 3 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); negative regulation of protein catabolic process (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH prostate cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 17 30517337 30554293 - 22301074;30032202 116886454 MODEL JAAIVD010000011;XM_032887954;XM_032887955 XP_032743845;XP_032743846 protein-coding 625921664 LOC116897247 microtubule-associated protein 1B 3 197133079 197155873 + 30032202 116897247 MODEL JAAIVD010000012;XM_032898977 XP_032754868 protein-coding 625921673 Gabra6 gamma-aminobutyric acid type A receptor subunit alpha6 ENCODES a protein that exhibits benzodiazepine receptor activity (ortholog); diazepam binding (ortholog); GABA-A receptor activity (ortholog); INVOLVED IN response to ethanol (ortholog); synaptic transmission, GABAergic (ortholog); ASSOCIATED WITH Binge Drinking (ortholog); childhood absence epilepsy (ortholog); Cushing Syndrome (ortholog); FOUND IN cerebellar Golgi cell to granule cell synapse (ortholog); dendrite (ortholog); GABA-ergic synapse (ortholog) 9 25172933 25187711 - 22301074;30032202 116909328 MODEL JAAIVD010000002;XM_032912868 XP_032768759 gamma-aminobutyric acid receptor subunit alpha-6 protein-coding 625921684 Vill villin like 8 110293536 110311444 + 22301074;30032202 116907902 MODEL JAAIVD010000027;XM_032911100 XP_032766991 villin-like protein protein-coding 625921708 Krt2 keratin 2 ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); structural constituent of skin epidermis (ortholog); INVOLVED IN cornification (ortholog); epidermis development (ortholog); intermediate filament organization (ortholog); ASSOCIATED WITH bullous congenital ichthyosiform erythroderma (ortholog); contact dermatitis (ortholog); genetic disease (ortholog); FOUND IN cornified envelope (ortholog); cytoplasm (ortholog); keratin filament (ortholog) 1 261258906 261266065 + 22301074;30032202 116883654 MODEL JAAIVD010000025;XM_032884851 XP_032740742 keratin, type II cytoskeletal 2 epidermal protein-coding 625921720 LOC116901093 60S ribosomal protein L7-like 5 155175230 155176104 + 22301074;30032202 116901093 MODEL JAAIVD010000023;XM_032902655 XP_032758546 protein-coding 625921724 Capn3 calpain 3 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent cysteine-type endopeptidase activity (ortholog); catalytic activity (ortholog); INVOLVED IN calcium-dependent self proteolysis (ortholog); cellular response to calcium ion (ortholog); cellular response to salt stress (ortholog); ASSOCIATED WITH Autosomal Dominant Limb-Girdle Muscular Dystrophy Type 4 (ortholog); autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2A (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); myofibril (ortholog) 5 98591708 98642890 + 22301074;30032202 116901835 MODEL JAAIVD010000023;XM_032904006;XM_032904007;XM_032904008;XM_032904009;XM_032904010;XM_032904011;XM_032904012 XP_032759897;XP_032759898;XP_032759899;XP_032759900;XP_032759901;XP_032759902;XP_032759903 calpain-3 protein-coding 625921767 Ccl25 C-C motif chemokine ligand 25 ENCODES a protein that exhibits CCR10 chemokine receptor binding (ortholog); chemokine activity (ortholog); chemokine receptor binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cell chemotaxis (ortholog); chemotaxis (ortholog); ASSOCIATED WITH Jaundice (ortholog); pleurisy (ortholog) 16 2486639 2495970 + 22301074;30032202 116885678 MODEL JAAIVD010000004;XM_032886985 XP_032742876 C-C motif chemokine 25 protein-coding 625921777 LOC116897875 elongin-B-like 4 15045562 15046076 + 116897875 MODEL JAAIVD010000003 pseudo 625921778 LOC116899153 protein phosphatase 1A-like 4 87062447 87063804 - 116899153 MODEL JAAIVD010000003 pseudo 625921779 Itpripl2 ITPRIP like 2 2 83163753 83167258 + 116893133 MODEL JAAIVD010000001;XM_032895063 XP_032750954 inositol 1,4,5-trisphosphate receptor-interacting protein-like 2 protein-coding 625921784 Taf1c TATA-box binding protein associated factor, RNA polymerase I subunit C ENCODES a protein that exhibits RNA polymerase I core promoter sequence-specific DNA binding (ortholog); RNA polymerase I general transcription initiation factor activity (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH autistic disorder (ortholog); developmental and epileptic encephalopathy 11 (ortholog); FOUND IN fibrillar center (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 17 39242276 39248887 - 22301074;30032202 116886389 MODEL JAAIVD010000011;XM_032887856;XM_032887857 XP_032743747;XP_032743748 TATA box-binding protein-associated factor RNA polymerase I subunit C protein-coding 625921807 LOC116910493 olfactory receptor 1D2-like 9 33717015 33717956 + 22301074;30032202 116910493 MODEL JAAIVD010000002;XM_032914384 XP_032770275 protein-coding 625921810 Gpx8 glutathione peroxidase 8 (putative) ENCODES a protein that exhibits peroxidase activity (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 3 183745037 183748628 + 22301074;30032202 116897184 MODEL JAAIVD010000012;XM_032898872;XM_032898873 XP_032754763;XP_032754764 probable glutathione peroxidase 8 protein-coding 625921820 LOC116901047 uncharacterized LOC116901047 5 133562906 133581191 + 22301074 116901047 MODEL JAAIVD010000023;XM_032902629 XP_032758520 uncharacterized protein LOC116901047 protein-coding 625921838 Ppm1f protein phosphatase, Mg2+/Mn2+ dependent 1F ENCODES a protein that exhibits calmodulin-dependent protein phosphatase activity (ortholog); phosphoprotein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN cellular response to xenobiotic stimulus (ortholog); intracellular signal transduction (ortholog); negative regulation of cell-cell adhesion mediated by cadherin (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; calcium/calmodulin dependent kinase 2 signaling pathway; FOUND IN cytosol (ortholog); perinuclear region of cytoplasm (ortholog); protein-containing complex (ortholog) 4 2188433 2219229 + 22301074;30032202 116898620 MODEL JAAIVD010000003;XM_032899829 XP_032755720 protein phosphatase 1F protein-coding 625921850 LOC116913768 heat shock protein HSP 90-alpha-like 12 84423505 84426226 - 22301074;30032202 116913768 MODEL JAAIVD010000007;XM_032918074 XP_032773965 protein-coding 625921855 LOC116885098 U7 small nuclear RNA 15 10161044 10161105 + 116885098 MODEL JAAIVD010000010;XR_004385965 snrna 625921858 Arrdc3 arrestin domain containing 3 ENCODES a protein that exhibits beta-3 adrenergic receptor binding (ortholog); INVOLVED IN fat pad development (ortholog); negative regulation of adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); negative regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN endosome (ortholog); plasma membrane (ortholog) 3 215474772 215487305 - 30032202 116897339 MODEL JAAIVD010000012;XM_032899094;XM_032899096;XR_004387417 XP_032754985;XP_032754987 arrestin domain-containing protein 3 protein-coding 625921876 LOC116887075 myosin light polypeptide 6-like 1 36411641 36411973 - 116887075 MODEL JAAIVD010000025 pseudo 625921877 Efcab10 EF-hand calcium binding domain 10 ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog) 7 46741471 46748035 + 22301074 116905666 MODEL JAAIVD010000026;XM_032908650 XP_032764541 EF-hand calcium-binding domain-containing protein 10 protein-coding 625921885 Slc1a7 solute carrier family 1 member 7 ENCODES a protein that exhibits extracellularly glutamate-gated chloride channel activity (ortholog); glutamate:sodium symporter activity (ortholog); L-glutamate transmembrane transporter activity (ortholog); INVOLVED IN chloride transmembrane transport (ortholog); L-glutamate transmembrane transport (ortholog); monoatomic anion transmembrane transport (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN axon terminus (ortholog); glutamatergic synapse (ortholog); photoreceptor cell terminal bouton (ortholog) 1 46819384 46863570 - 30032202 116887514 MODEL JAAIVD010000025;XM_032889142;XM_032889148;XM_032889156;XM_032889160;XM_032889168;XM_032889175 XP_032745033;XP_032745039;XP_032745047;XP_032745051;XP_032745059;XP_032745066 excitatory amino acid transporter 5 protein-coding 625921913 Bmp3 bone morphogenetic protein 3 ENCODES a protein that exhibits BMP receptor binding (ortholog); growth factor activity (ortholog); INVOLVED IN negative regulation of ossification (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Tibial Fractures (ortholog); FOUND IN extracellular region (ortholog); vesicle (ortholog) 11 9120724 9146354 + 22301074;30032202 116912461 MODEL JAAIVD010000006;XM_032916527 XP_032772418 protein-coding 625921920 LOC116897569 small nucleolar RNA SNORA17 3 78177007 78177141 - 116897569 MODEL JAAIVD010000012;XR_004387580 snorna 625921923 LOC116906087 transcription factor BTF3-like 7 69913545 69918313 - 116906087 MODEL JAAIVD010000026 pseudo 625921924 Col5a2 collagen type V alpha 2 chain ENCODES a protein that exhibits SMAD binding (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); collagen fibril organization (ortholog); eye morphogenesis (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH aortic disease (ortholog); connective tissue disease (ortholog); Disproportionate Tall Stature (ortholog); FOUND IN collagen trimer (ortholog); collagen type V trimer (ortholog) 4 121247607 121383864 - 22301074 116899354 MODEL JAAIVD010000003;XM_032901061 XP_032756952 collagen alpha-2(V) chain protein-coding 625921982 Mybpc3 myosin binding protein C3 ENCODES a protein that exhibits identical protein binding (ortholog); myosin binding (ortholog); myosin heavy chain binding (ortholog); INVOLVED IN cardiac muscle contraction (ortholog); heart morphogenesis (ortholog); myosin filament assembly (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); arrhythmogenic right ventricular dysplasia 1 (ortholog); FOUND IN A band (ortholog); cardiac myofibril (ortholog); myofibril (ortholog) 5 65286303 65304238 + 22301074 116900337 MODEL JAAIVD010000023;XM_032902091;XM_032902092 XP_032757982;XP_032757983 myosin-binding protein C, cardiac-type protein-coding 625922024 LOC116895048 small nucleolar RNA SNORA17 2 38635078 38635207 - 116895048 MODEL JAAIVD010000001;XR_004387231 snorna 625922027 LOC116897599 small nucleolar RNA SNORA17 3 223305935 223306053 - 116897599 MODEL JAAIVD010000012 pseudo 625922028 LOC116903003 vomeronasal type-1 receptor 92 6 146572790 146575399 - 22301074;30032202 116903003 MODEL JAAIVD010000024;XM_032905314 XP_032761205 protein-coding 625922032 LOC116908208 40S ribosomal protein S10-like 8 67564482 67608282 + 116908208 MODEL JAAIVD010000027 pseudo 625922033 LOC116895752 amphoterin-induced protein 1-like 3 36749029 36774720 + 116895752 MODEL JAAIVD010000012 pseudo 625922034 LOC116914964 protein SET-like 13 15063854 15069281 + 116914964 MODEL JAAIVD010000008 pseudo 625922035 LOC116900293 olfactory receptor 8K3-like 5 63639023 63639964 - 22301074;30032202 116900293 MODEL JAAIVD010000023;XM_032902048 XP_032757939 protein-coding 625922038 LOC116893727 olfactory receptor 9Q1-like 2 13802629 13803564 - 22301074;30032202 116893727 MODEL JAAIVD010000001;XM_032895440 XP_032751331 protein-coding 625922041 LOC116907390 secreted seminal-vesicle Ly-6 protein 1-like 8 53971826 53973444 - 30032202 116907390 MODEL JAAIVD010000027;XM_032910343 XP_032766234 protein-coding 625922046 LOC116907050 olfactory receptor 7G3-like 8 14945694 14946638 + 22301074;30032202 116907050 MODEL JAAIVD010000027;XM_032910005 XP_032765896 protein-coding 625922050 C9H17orf75 chromosome 9 C17orf75 homolog INVOLVED IN intracellular protein transport (ortholog); vesicle tethering to Golgi (ortholog); FOUND IN cytoplasmic vesicle (ortholog); cytosol (ortholog); trans-Golgi network (ortholog) 9 90044322 90058407 + 22301074;30032202 116909442 MODEL JAAIVD010000002;XM_032913021 XP_032768912 protein Njmu-R1 protein-coding 625922064 LOC116893261 small nuclear ribonucleoprotein-associated protein B-like 2 138069740 138070397 - 116893261 MODEL JAAIVD010000001 pseudo 625922065 Atmin ATM interactor ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); dynein complex binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN motile cilium assembly (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of gene expression (ortholog); FOUND IN nuclear body (ortholog) 17 36579194 36596183 + 30032202 116886095 MODEL JAAIVD010000011;XM_032887420 XP_032743311 protein-coding 625922073 LOC116908500 40S ribosomal protein S28-like 9 37839366 37839577 - 22301074;30032202 116908500 MODEL JAAIVD010000002;XM_032911670 XP_032767561 protein-coding 625922077 COX3 cytochrome c oxidase subunit III ENCODES a protein that exhibits cytochrome-c oxidase activity (inferred); electron transfer activity (inferred); INVOLVED IN aerobic electron transport chain (inferred); aerobic respiration (inferred); mitochondrial electron transport, cytochrome c to oxygen (inferred); FOUND IN membrane (inferred); mitochondrial inner membrane (inferred); mitochondrion (inferred) MT 8592 9375 + 7751805 B7SE67;E1U5S6 REVIEWED EU273707 ABX45239;YP_002791022 protein-coding 625922078 LOC116883154 dual specificity mitogen-activated protein kinase kinase 4-like 1 39256629 39257823 - 116883154 MODEL JAAIVD010000025 pseudo 625922079 Sat2 spermidine/spermine N1-acetyltransferase family member 2 ENCODES a protein that exhibits diamine N-acetyltransferase activity (ortholog); identical protein binding (ortholog); N-acetyltransferase activity (ortholog); INVOLVED IN nor-spermidine metabolic process (ortholog); polyamine biosynthetic process (ortholog); putrescine acetylation (ortholog); PARTICIPATES IN hypoxia inducible factor pathway 9 49233423 49235553 + 30032202 116908721 MODEL JAAIVD010000002;XM_032912060;XM_032912061 XP_032767951;XP_032767952 diamine acetyltransferase 2 protein-coding 625922092 LOC116893718 olfactory receptor 10W1-like 2 13645245 13646195 + 22301074 116893718 MODEL JAAIVD010000001;XM_032895433 XP_032751324 protein-coding 625922095 Six3 SIX homeobox 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN apoptotic process involved in development (ortholog); brain development (ortholog); camera-type eye development (ortholog); ASSOCIATED WITH genetic disease (ortholog); holoprosencephaly (ortholog); holoprosencephaly 2 (ortholog); FOUND IN nucleus (ortholog) 7 7371460 7375476 - 30032202 116905770 MODEL JAAIVD010000026;XM_032908738 XP_032764629 homeobox protein SIX3 protein-coding 625922101 Tesmin testis expressed metallothionein like protein INVOLVED IN male meiotic nuclear division (ortholog); spermatogenesis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 2 4254363 4272954 - 30032202 116890810 MODEL JAAIVD010000001;XM_032891306 XP_032747197 protein-coding 625922114 LOC116905069 ribose-phosphate pyrophosphokinase 1-like 7 70610346 70611514 + 22301074;30032202 116905069 MODEL JAAIVD010000026;XM_032907775 XP_032763666 protein-coding 625922119 LOC116891189 cytochrome P450 2A1 2 42438227 42453056 - 22301074;30032202 116891189 MODEL JAAIVD010000001;XM_032892009 XP_032747900 protein-coding 625922132 LOC116894382 olfactory receptor 13A1-like 2 156786872 156790413 - 22301074 116894382 MODEL JAAIVD010000001;XM_032896090 XP_032751981 protein-coding 625922136 Mrpl15 mitochondrial ribosomal protein L15 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 1 140152726 140160930 - 22301074;30032202 116903695 MODEL JAAIVD010000025;XM_032906373 XP_032762264 39S ribosomal protein L15, mitochondrial protein-coding 625922145 LOC116883785 AP-1 complex subunit beta-1-like 14 43330233 43333133 - 22301074;30032202 116883785 MODEL JAAIVD010000009;XM_032885028 XP_032740919 protein-coding 625922150 LOC116900073 histone RNA hairpin-binding protein-like 5 9843945 9844916 + 116900073 MODEL JAAIVD010000023 pseudo 625922151 LOC116910930 60S ribosomal protein L9-like 10 61455825 61456386 + 116910930 MODEL JAAIVD010000005 pseudo 625922152 Sec16a SEC16 homolog A, endoplasmic reticulum export factor INVOLVED IN endoplasmic reticulum organization (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); Golgi to plasma membrane transport (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum exit site (ortholog) 5 10643857 10678548 + 30032202 116901267 MODEL JAAIVD010000023;XM_032903024 XP_032758915 protein transport protein Sec16A protein-coding 625922187 Srsf10 serine and arginine rich splicing factor 10 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN cytosolic transport (ortholog); mRNA splice site recognition (ortholog); mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Endometrial Neoplasms (ortholog); macular degeneration (ortholog); Ovarian Neoplasms (ortholog); FOUND IN axon terminus (ortholog); dendrite (ortholog); neuronal cell body (ortholog) 1 22358975 22371980 - 22301074 116890283 MODEL JAAIVD010000025;XM_032890996 XP_032746887 serine/arginine-rich splicing factor 10 protein-coding 625922197 LOC116888603 histone deacetylase 6-like X 14184001 14189825 + 30032202 116888603 MODEL JAAIVD010000014;XM_032889901;XM_032889902;XM_032889903 XP_032745792;XP_032745793;XP_032745794 protein-coding 625922216 Strip2 striatin interacting protein 2 FOUND IN cytoplasm (ortholog); FAR/SIN/STRIPAK complex (ortholog) 6 109601237 109639738 - 30032202 116904006 MODEL JAAIVD010000024;XM_032906821 XP_032762712 striatin-interacting protein 2 protein-coding 625922241 LOC116887986 protein YIPF4-like X 71526294 71536409 + 116887986 MODEL JAAIVD010000014 pseudo 625922242 Etv1 ETS variant transcription factor 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN axon guidance (ortholog); mechanosensory behavior (ortholog); muscle organ development (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); Neoplastic Processes (ortholog); Prostatic Neoplasms (ortholog) 7 52020957 52108660 + 22301074;30032202 116904985 MODEL JAAIVD010000026;XM_032907663;XM_032907664;XM_032907665 XP_032763554;XP_032763555;XP_032763556 ETS translocation variant 1 protein-coding 625922265 Klhl6 kelch like family member 6 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); germinal center formation (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Monoclonal B-Cell Lymphocytosis (ortholog); multiple sclerosis (ortholog); FOUND IN cytoplasm (ortholog) 4 4782791 4822556 - 22301074 116898684 MODEL JAAIVD010000003;XM_032899942 XP_032755833 kelch-like protein 6 protein-coding 625922276 Setd7 SET domain containing 7, histone lysine methyltransferase ENCODES a protein that exhibits chromatin binding (ortholog); histone H3 methyltransferase activity (ortholog); histone methyltransferase activity (ortholog); INVOLVED IN chromatin organization (ortholog); DNA damage response (ortholog); heterochromatin organization (ortholog); PARTICIPATES IN carnitine biosynthetic pathway; histone modification pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH cognitive disorder (ortholog); extrahepatic cholestasis (ortholog); fetal alcohol spectrum disorder (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog) 3 102891089 102933274 + 22301074 116896887 MODEL JAAIVD010000012;XM_032898434 XP_032754325 histone-lysine N-methyltransferase SETD7 protein-coding 625922288 LOC116890431 U7 small nuclear RNA 1 223640416 223640479 - 116890431 MODEL JAAIVD010000025;XR_004386629 snrna 625922291 Glb1l galactosidase beta 1 like 4 148557685 148568156 - 22301074;30032202 116899527 MODEL JAAIVD010000003;XM_032901395;XM_032901396 XP_032757286;XP_032757287 beta-galactosidase-1-like protein protein-coding 625922312 Sod3 superoxide dismutase 3 ENCODES a protein that exhibits molecular adaptor activity (ortholog); superoxide dismutase activity (ortholog); INVOLVED IN blood vessel diameter maintenance (ortholog); response to copper ion (ortholog); response to hypoxia (ortholog); PARTICIPATES IN cardiovascular system disease pathway; diabetes mellitus pathway; ASSOCIATED WITH brain ischemia (ortholog); Chemical and Drug Induced Liver Injury (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) 11 53763470 53765076 - 30032202 116912727 MODEL JAAIVD010000006;XM_032916859 XP_032772750 extracellular superoxide dismutase [Cu-Zn] protein-coding 625922317 Chrnb3 cholinergic receptor nicotinic beta 3 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); heterocyclic compound binding (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); presynaptic modulation of chemical synaptic transmission (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH alcohol dependence (ortholog); bipolar disorder (ortholog); cocaine dependence (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); dopaminergic synapse (ortholog); protein-containing complex (ortholog) 13 59188530 59218304 - 22301074;30032202 116914563 MODEL JAAIVD010000008;XM_032918917;XM_032918918 XP_032774808;XP_032774809 neuronal acetylcholine receptor subunit beta-3 protein-coding 625922332 Crip2 cysteine rich protein 2 INVOLVED IN hemopoiesis (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cell cortex (ortholog) 7 130743579 130748797 + 116905530 MODEL JAAIVD010000026;XM_032908567 XP_032764458 cysteine-rich protein 2 protein-coding 625922343 LOC116909602 olfactory receptor 6C3-like 1 160332863 160350622 + 116909602 MODEL JAAIVD010000025 pseudo 625922344 LOC116900408 olfactory receptor 4C6-like 5 70188563 70189474 - 22301074 116900408 MODEL JAAIVD010000023;XM_032902153 XP_032758044 protein-coding 625922347 Azin1 antizyme inhibitor 1 ENCODES a protein that exhibits ornithine decarboxylase activator activity (ortholog); INVOLVED IN estrous cycle (ortholog); negative regulation of protein catabolic process (ortholog); positive regulation of centrosome duplication (ortholog); PARTICIPATES IN polyamine metabolic pathway; ASSOCIATED WITH Diabetic Nephropathies (ortholog); esophagus squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog); nucleus (ortholog) 1 212533983 212560793 + 22301074;30032202 116910872 MODEL JAAIVD010000025;XM_032914631;XM_032914639;XM_032914649 XP_032770522;XP_032770530;XP_032770540 protein-coding 625922369 Astn1 astrotactin 1 INVOLVED IN cell migration (ortholog); cell-cell adhesion (ortholog); locomotory behavior (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); FOUND IN endosome (ortholog); external side of plasma membrane (ortholog); membrane (ortholog) 10 37687440 37995176 + 22301074;30032202 116910847 MODEL JAAIVD010000005;XM_032914597;XM_032914598;XM_032914599;XM_032914600;XM_032914601 XP_032770488;XP_032770489;XP_032770490;XP_032770491;XP_032770492 astrotactin-1 protein-coding 625922415 Kiaa1143 KIAA1143 ortholog FOUND IN intercellular bridge (ortholog); nucleoplasm (ortholog) 8 114083646 114087426 - 116908012 MODEL JAAIVD010000027;XM_032911270 XP_032767161 uncharacterized protein KIAA1143 homolog protein-coding 625922422 Asb4 ankyrin repeat and SOCS box containing 4 ENCODES a protein that exhibits enzyme binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN positive regulation of vasculogenesis (ortholog); protein autoubiquitination (ortholog); ASSOCIATED WITH pre-eclampsia (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); Cul5-RING ubiquitin ligase complex (ortholog) 6 133186502 133226206 - 22301074;30032202 116902978 MODEL JAAIVD010000024;XM_032905297 XP_032761188 ankyrin repeat and SOCS box protein 4 protein-coding 625922431 Anks1b ankyrin repeat and sterile alpha motif domain containing 1B ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN chemical synaptic transmission, postsynaptic (ortholog); postsynapse to nucleus signaling pathway (ortholog); receptor localization to synapse (ortholog); ASSOCIATED WITH Wilson disease (ortholog); FOUND IN glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog); nucleoplasm (ortholog) 1 168951883 170054969 + 22301074;30032202 116907973 MODEL JAAIVD010000025;XM_032911207;XM_032911216;XM_032911225;XM_032911232;XM_032911242;XM_032911250;XM_032911258;XM_032911265;XM_032911272;XM_032911280;XM_032911288;XM_032911296;XM_032911305;XM_032911312;XM_032911320;XM_032911325;XM_032911329 XP_032767098;XP_032767107;XP_032767116;XP_032767123;XP_032767133;XP_032767141;XP_032767149;XP_032767156;XP_032767163;XP_032767171;XP_032767179;XP_032767187;XP_032767196;XP_032767203;XP_032767211;XP_032767216;XP_032767220 ankyrin repeat and sterile alpha motif domain-containing protein 1B protein-coding 625922492 Cdc42ep3 CDC42 effector protein 3 FOUND IN actin cytoskeleton (ortholog); plasma membrane (ortholog) 7 13891963 13893649 + 116905890 MODEL JAAIVD010000026;XM_032908876 XP_032764767 protein-coding 625922497 LOC116907027 cytochrome c oxidase subunit 6C-2-like 8 100403883 100404104 - 116907027 MODEL JAAIVD010000027;XM_032909970 XP_032765861 protein-coding 625922501 Colec10 collectin subfamily member 10 ENCODES a protein that exhibits chemoattractant activity (ortholog); D-mannose binding (ortholog); INVOLVED IN complement activation, lectin pathway (ortholog); cranial skeletal system development (ortholog); positive regulation of opsonization (ortholog); ASSOCIATED WITH 3MC syndrome 3 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog) 1 228870387 228916413 + 116911448 MODEL JAAIVD010000025;XM_032915419 XP_032771310 collectin-10 protein-coding 625922510 Zup1 zinc finger containing ubiquitin peptidase 1 FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 18 28667959 28696181 - 30032202 116887117 MODEL JAAIVD010000013;XM_032888664 XP_032744555 zinc finger-containing ubiquitin peptidase 1 protein-coding 625922523 Mlnr motilin receptor ENCODES a protein that exhibits G protein-coupled peptide receptor activity (ortholog); hormone binding (ortholog); FOUND IN plasma membrane (ortholog) 12 52118076 52125819 + 30032202 116913171 MODEL JAAIVD010000007;XM_032917373 XP_032773264 protein-coding 625922529 Slc61a1 solute carrier family 61 member 1 ENCODES a protein that exhibits molybdate ion transmembrane transporter activity (ortholog); INVOLVED IN molybdate ion transport (ortholog); response to food (ortholog); response to starvation (ortholog) 1 260796162 260798451 - 22301074;30032202 116883521 MODEL JAAIVD010000025;XM_032884697 XP_032740588 Mfsd5 major facilitator superfamily domain containing 5;molybdate-anion transporter protein-coding 625922535 LOC116893942 H/ACA ribonucleoprotein complex subunit 2-like 2 91449427 91449881 - 116893942 MODEL JAAIVD010000001 pseudo 625922536 LOC116896089 40S ribosomal protein S8-like 3 216858084 216858658 - 116896089 MODEL JAAIVD010000012 pseudo 625922537 LOC116886777 small nucleolar RNA U3 17 42679110 42679320 - 116886777 MODEL JAAIVD010000011;XR_004386172 snorna 625922540 Cep162 centrosomal protein 162 INVOLVED IN cilium assembly (ortholog); FOUND IN axonemal microtubule (ortholog); centriole (ortholog); centrosome (ortholog) 8 81208240 81268440 - 30032202 116906883 MODEL JAAIVD010000027;XM_032909797 XP_032765688 centrosomal protein of 162 kDa protein-coding 625922570 Prim2 DNA primase subunit 2 ENCODES a protein that exhibits 4 iron, 4 sulfur cluster binding (ortholog); DNA-directed RNA polymerase activity (ortholog); DNA/RNA hybrid binding (ortholog); INVOLVED IN DNA replication initiation (ortholog); DNA replication, synthesis of primer (ortholog); FOUND IN alpha DNA polymerase:primase complex (ortholog); nucleoplasm (ortholog) 4 109723993 109922650 - 22301074;30032202 116899265 MODEL JAAIVD010000003;XM_032900882;XM_032900883 XP_032756773;XP_032756774 DNA primase large subunit protein-coding 625922592 LOC116896141 geranylgeranyl transferase type-2 subunit beta-like 3 7542435 7545286 + 30032202 116896141 MODEL JAAIVD010000012;XM_032897126 XP_032753017 protein-coding 625922601 LOC116883581 histone H2A type 1-B 14 42745515 42746030 + 22301074;30032202 116883581 MODEL JAAIVD010000009;XM_032884761 XP_032740652 protein-coding 625922606 Rab1a RAB1A, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); cell migration (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog); endoplasmic reticulum (ortholog) 11 88482273 88508509 + 22301074 116912796 MODEL JAAIVD010000006;XM_032916961 XP_032772852 ras-related protein Rab-1A protein-coding 625922616 Tbc1d2 TBC1 domain family member 2 ENCODES a protein that exhibits cadherin binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN positive regulation of GTPase activity (ortholog); regulation of cilium assembly (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cell junction (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) 1 99678046 99725232 - 116901933 MODEL JAAIVD010000025;XM_032904161;XM_032904170 XP_032760052;XP_032760061 TBC1 domain family member 2A protein-coding 625922637 LOC116888333 olfactory receptor 11L1-like X 112954438 112955370 + 22301074 116888333 MODEL JAAIVD010000014;XM_032889604 XP_032745495 protein-coding 625922640 Arfgap2 ARF GTPase activating protein 2 ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN Golgi apparatus (ortholog) 5 65426867 65438814 + 22301074;30032202 116901618 MODEL JAAIVD010000023;XM_032903666;XM_032903667;XM_032903668;XM_032903669 XP_032759557;XP_032759558;XP_032759559;XP_032759560 ADP ribosylation factor GTPase activating protein 2;ADP-ribosylation factor GTPase-activating protein 2 protein-coding 625922669 Eda ectodysplasin A ENCODES a protein that exhibits cytokine activity (ortholog); death receptor agonist activity (ortholog); death receptor binding (ortholog); INVOLVED IN cell-matrix adhesion (ortholog); cytokine-mediated signaling pathway (ortholog); gene expression (ortholog); ASSOCIATED WITH anodontia (ortholog); Clouston syndrome (ortholog); craniofrontonasal syndrome (ortholog); FOUND IN apical part of cell (ortholog); endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) X 58060707 58151984 + 22301074;30032202 116889181 MODEL JAAIVD010000014;XM_032890344 XP_032746235 ectodysplasin-A protein-coding 625922679 Hnrnph2 heterogeneous nuclear ribonucleoprotein H2 ASSOCIATED WITH Gitelman syndrome (ortholog); syndromic X-linked intellectual developmental disorder Bain type (ortholog); FOUND IN nucleoplasm (ortholog); postsynaptic density (ortholog); ribonucleoprotein complex (ortholog) X 86905826 86911736 + 22301074;30032202 116888636 MODEL JAAIVD010000014;XM_032889930 XP_032745821 protein-coding 625922687 Gdf3 growth differentiation factor 3 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN endoderm development (ortholog); eye development (ortholog); formation of anatomical boundary (ortholog); ASSOCIATED WITH Camptocormia (ortholog); congenital heart disease (ortholog); Edema (ortholog); FOUND IN cytoplasm (ortholog) 6 24489549 24493669 + 22301074;30032202 116902898 MODEL JAAIVD010000024;XM_032905227 XP_032761118 growth/differentiation factor 3 protein-coding 625922693 Nme4 NME/NM23 nucleoside diphosphate kinase 4 ENCODES a protein that exhibits cardiolipin binding (ortholog); GTPase binding (ortholog); mitochondrion-mitochondrion outer membrane tether activity (ortholog); INVOLVED IN intermembrane phospholipid transfer (ortholog); lipid transport (ortholog); protein hexamerization (ortholog); PARTICIPATES IN cardiolipin metabolic pathway; de novo pyrimidine biosynthetic pathway; FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrial matrix (ortholog) 9 3352421 3356023 - 22301074;30032202 116909058 MODEL JAAIVD010000002;XM_032912536 XP_032768427 nucleoside diphosphate kinase, mitochondrial protein-coding 625922702 Yju2 YJU2 splicing factor homolog FOUND IN U2-type catalytic step 1 spliceosome (ortholog) 4 87351404 87361155 + 22301074;30032202 116899159 MODEL JAAIVD010000003;XM_032900718;XM_032900719 XP_032756609;XP_032756610 splicing factor YJU2 protein-coding 625922718 Znf22 zinc finger protein 22 ENCODES a protein that exhibits DNA binding (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 6 29978037 29982200 + 116903361 MODEL JAAIVD010000024;XM_032905835;XM_032905836 XP_032761726;XP_032761727 protein-coding 625922727 LOC116889957 olfactory receptor 6C3-like 1 161850075 161851013 - 22301074;30032202 116889957 MODEL JAAIVD010000025;XM_032890759 XP_032746650 protein-coding 625922730 LOC116908376 small nucleolar RNA U2-30 8 11117943 11118012 - 116908376 MODEL JAAIVD010000027;XR_004388923 snorna 625922733 C1H12orf56 chromosome 1 C12orf56 homolog 1 200082669 200130686 + 116890033 MODEL JAAIVD010000025;XM_032890809 XP_032746700 uncharacterized protein C12orf56 homolog protein-coding 625922750 Reeld1 reeler domain containing 1 ASSOCIATED WITH COVID-19 (ortholog) 17 21319855 21335179 + 30032202 116886646 MODEL JAAIVD010000011;XM_032888146 XP_032744037 reelin domain-containing protein 1 protein-coding 625922760 LOC116889034 uncharacterized LOC116889034 X 19680914 19685323 - 116889034 MODEL JAAIVD010000014 pseudo 625922761 LOC116890111 60S ribosomal protein L15-like 1 234455991 234456606 + 116890111 MODEL JAAIVD010000025 pseudo 625922762 Trim29 tripartite motif containing 29 ENCODES a protein that exhibits identical protein binding (ortholog); p53 binding (ortholog); INVOLVED IN negative regulation of protein localization to nucleus (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH high grade glioma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 8 37884910 37909631 + 22301074 116907611 MODEL JAAIVD010000027;XM_032910666 XP_032766557 tripartite motif-containing protein 29 protein-coding 625922775 LOC116897610 small nucleolar RNA SNORA17 3 106842922 106843040 - 116897610 MODEL JAAIVD010000012 pseudo 625922776 LOC116905095 cytochrome b-c1 complex subunit 10 ASSOCIATED WITH pre-malignant neoplasm (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex III (ortholog) 1 154475320 154480346 + 22301074;30032202 116905095 MODEL JAAIVD010000025;XM_032907822;XM_032907829;XM_032907839 XP_032763713;XP_032763720;XP_032763730 protein-coding 625922790 Coq2 coenzyme Q2, polyprenyltransferase ENCODES a protein that exhibits 4-hydroxybenzoate polyprenyltransferase activity (ortholog); prenyltransferase activity (ortholog); INVOLVED IN glycerol metabolic process (ortholog); ubiquinone biosynthetic process (ortholog); PARTICIPATES IN ubiquinone biosynthetic pathway; ASSOCIATED WITH brain disease (ortholog); coenzyme Q10 deficiency disease (ortholog); focal segmental glomerulosclerosis (ortholog); FOUND IN extrinsic component of mitochondrial inner membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 11 10879378 10898833 - 30032202 116912400 MODEL JAAIVD010000006;XM_032916458 XP_032772349 4-hydroxybenzoate polyprenyltransferase, mitochondrial protein-coding 625922801 C2H9orf85 chromosome 2 C9orf85 homolog 2 21692267 21747550 - 116891032 MODEL JAAIVD010000001;XM_032891714 XP_032747605 uncharacterized protein C9orf85 homolog protein-coding 625922809 LOC116888933 prostaglandin D2 receptor-like X 405420 413243 + 116888933 MODEL JAAIVD010000014 pseudo 625922810 Hipk1 homeodomain interacting protein kinase 1 INVOLVED IN adherens junction assembly (ortholog); anterior/posterior pattern specification (ortholog); embryonic camera-type eye morphogenesis (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); gastrointestinal stromal tumor (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) 3 54281824 54331993 + 22301074;30032202 116896444 MODEL JAAIVD010000012;XM_032897597 XP_032753488 homeodomain-interacting protein kinase 1 protein-coding 625922830 LOC116913533 ras-related protein Rap-1A-like 12 126259 126878 + 116913533 MODEL JAAIVD010000007 pseudo 625922831 Trnae-cuc transfer RNA glutamic acid (anticodon CUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 39931111 39931182 + 116910795 MODEL JAAIVD010000002 trna 625922832 LOC116894676 vomeronasal type-1 receptor 4-like 2 210116442 210117335 + 22301074;30032202 116894676 MODEL JAAIVD010000001;XM_032896379 XP_032752270 protein-coding 625922835 C1qtnf5 C1q and TNF related 5 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN inner ear development (ortholog); protein secretion (ortholog); ASSOCIATED WITH isolated microphthalmia 5 (ortholog); late-onset retinal degeneration (ortholog); lens disease (ortholog); FOUND IN apical plasma membrane (ortholog); bicellular tight junction (ortholog); extracellular region (ortholog) 8 38668436 38670376 + 22301074 116907626 MODEL JAAIVD010000027;XM_032910684;XM_032910685 XP_032766575;XP_032766576 complement C1q tumor necrosis factor-related protein 5 protein-coding 625922847 Lsamp limbic system associated membrane protein INVOLVED IN locomotory exploration behavior (ortholog); FOUND IN cytosol (ortholog); postsynaptic membrane (ortholog); presynaptic membrane (ortholog) 4 24949701 27104304 + 30032202 116897705 MODEL JAAIVD010000003;XM_032899156;XM_032899157;XM_032899158;XM_032899159;XM_032899160 XP_032755047;XP_032755048;XP_032755049;XP_032755050;XP_032755051 limbic system-associated membrane protein protein-coding 625922870 Slc35a1 solute carrier family 35 member A1 ENCODES a protein that exhibits antiporter activity (ortholog); CMP-N-acetylneuraminate transmembrane transporter activity (ortholog); INVOLVED IN CMP-N-acetylneuraminate transmembrane transport (ortholog); N-acetylneuraminate metabolic process (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation type IIf (ortholog); genetic disease (ortholog); FOUND IN Golgi membrane (ortholog); membrane (ortholog) 1 108069531 108090177 + 22301074;30032202 116902192 MODEL JAAIVD010000025;XM_032904560 XP_032760451 CMP-sialic acid transporter protein-coding 625922882 LOC116910081 olfactory receptor 1361-like 9 33641392 33642303 + 22301074;30032202 116910081 MODEL JAAIVD010000002;XM_032913897 XP_032769788 protein-coding 625922885 Dpysl4 dihydropyrimidinase like 4 ENCODES a protein that exhibits filamin binding (ortholog); phosphoprotein binding (ortholog); INVOLVED IN neuron development (ortholog) 2 62743086 62758536 - 22301074;30032202 116891366 MODEL JAAIVD010000001;XM_032892363 XP_032748254 dihydropyrimidinase-related protein 4 protein-coding 625922903 LOC116903171 uncharacterized LOC116903171 6 14635845 14644641 - 116903171 MODEL JAAIVD010000024;XR_004388256 ncrna 625922908 LOC116908114 ATP synthase subunit g, mitochondrial-like 8 100019952 100020356 - 22301074;30032202 116908114 MODEL JAAIVD010000027;XM_032911395 XP_032767286 protein-coding 625922913 Vapb VAMP associated protein B and C ENCODES a protein that exhibits beta-tubulin binding (ortholog); enzyme binding (ortholog); FFAT motif binding (ortholog); INVOLVED IN cholesterol transport (ortholog); COPII-coated vesicle budding (ortholog); endoplasmic reticulum organization (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); amyotrophic lateral sclerosis type 8 (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum exit site (ortholog) 5 144197379 144242591 - 22301074;30032202 116902272 MODEL JAAIVD010000023;XM_032904705 XP_032760596 vesicle-associated membrane protein-associated protein B/C protein-coding 625922923 Pitx3 paired like homeodomain 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to glial cell derived neurotrophic factor (ortholog); dopaminergic neuron differentiation (ortholog); lens development in camera-type eye (ortholog); ASSOCIATED WITH anterior segment dysgenesis (ortholog); anterior segment dysgenesis 1 (ortholog); Aphakia (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) 2 45602006 45614446 - 22301074;30032202 116893813 MODEL JAAIVD010000001;XM_032895528 XP_032751419 pituitary homeobox 3 protein-coding 625922931 Psmd6 proteasome 26S subunit, non-ATPase 6 ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog) 12 83992869 84002986 - 22301074;30032202 116913546 MODEL JAAIVD010000007;XM_032917751 XP_032773642 26S proteasome non-ATPase regulatory subunit 6 protein-coding 625922943 LOC116903259 glyceraldehyde-3-phosphate dehydrogenase-like 6 22737072 22737595 + 22301074;30032202 116903259 MODEL JAAIVD010000024;XM_032905641 XP_032761532 protein-coding 625922947 Ntsr2 neurotensin receptor 2 ENCODES a protein that exhibits G protein-coupled neurotensin receptor activity (ortholog); identical protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN exploration behavior (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH Binge Drinking (ortholog); FOUND IN cell surface (ortholog); dendritic shaft (ortholog); membrane (ortholog) 7 36451814 36458476 + 22301074;30032202 116904892 MODEL JAAIVD010000026;XM_032907496 XP_032763387 neurotensin receptor type 2 protein-coding 625922955 LOC116906080 U11/U12 small nuclear ribonucleoprotein 48 kDa protein-like 7 64941865 64942899 - 116906080 MODEL JAAIVD010000026 pseudo 625922956 LOC116913066 sphingomyelin phosphodiesterase 5-like 1 248621002 248623568 + 22301074;30032202 116913066 MODEL JAAIVD010000025;XM_032917198;XM_032917206;XM_032917212 XP_032773089;XP_032773097;XP_032773103 protein-coding 625922973 LOC116897453 U6 spliceosomal RNA 3 47463576 47463674 - 116897453 MODEL JAAIVD010000012 pseudo 625922974 Rida reactive intermediate imine deaminase A ENCODES a protein that exhibits cation binding (ortholog); identical protein binding (ortholog); long-chain fatty acid binding (ortholog); INVOLVED IN G1 to G0 transition (ortholog); kidney development (ortholog); lung development (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); Experimental Liver Cirrhosis (ortholog); Experimental Liver Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial matrix (ortholog) 1 208183939 208197616 - 30032202 116910487 MODEL JAAIVD010000025;XM_032914379 XP_032770270 2-iminobutanoate/2-iminopropanoate deaminase;reactive intermediate imine deaminase A homolog protein-coding 625922984 Tmed4 transmembrane p24 trafficking protein 4 INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog) 11 75193930 75198395 - 30032202 116912528 MODEL JAAIVD010000006;XM_032916627 XP_032772518 transmembrane emp24 domain-containing protein 4 protein-coding 625922993 Dusp14 dual specificity phosphatase 14 ASSOCIATED WITH pulmonary tuberculosis (ortholog) 9 86610912 86630999 + 22301074;30032202 116909777 MODEL JAAIVD010000002;XM_032913469;XM_032913470;XM_032913471 XP_032769360;XP_032769361;XP_032769362 dual specificity protein phosphatase 14 protein-coding 625923005 LOC116900584 olfactory receptor 4F15-like 5 90504858 90505808 + 22301074 116900584 MODEL JAAIVD010000023;XM_032902306 XP_032758197 protein-coding 625923009 LOC116896880 H/ACA ribonucleoprotein complex subunit 2-like 3 100991275 100993624 + 116896880 MODEL JAAIVD010000012 pseudo 625923010 Sorbs3 sorbin and SH3 domain containing 3 ENCODES a protein that exhibits vinculin binding (ortholog); INVOLVED IN cell-substrate adhesion (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of MAPK cascade (ortholog); FOUND IN cytoplasm (ortholog); focal adhesion (ortholog); nucleus (ortholog) 12 54141889 54168878 + 22301074 116913812 MODEL JAAIVD010000007;XM_032918120;XM_032918121;XM_032918122;XM_032918123 XP_032774011;XP_032774012;XP_032774013;XP_032774014 vinexin protein-coding 625923043 Ring1 ring finger protein 1 ENCODES a protein that exhibits chromatin binding (ortholog); ubiquitin-protein transferase activator activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); camera-type eye morphogenesis (ortholog); chromatin organization (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN nuclear body (ortholog); nucleus (ortholog); PcG protein complex (ortholog) 18 8301681 8305198 + 30032202 116887407 MODEL JAAIVD010000013;XM_032889004 XP_032744895 E3 ubiquitin-protein ligase RING1 protein-coding 625923054 Tmem40 transmembrane protein 40 6 30967522 30980179 + 116904633 MODEL JAAIVD010000024;XM_032907425;XM_032907426;XM_032907427 XP_032763316;XP_032763317;XP_032763318 protein-coding 625923073 Mcm3ap minichromosome maintenance complex component 3 associated protein ENCODES a protein that exhibits chromatin binding (ortholog); histone acetyltransferase activity (ortholog); histone binding (ortholog); INVOLVED IN nucleosome organization (ortholog); poly(A)+ mRNA export from nucleus (ortholog); somatic hypermutation of immunoglobulin genes (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Autosomal Recessive Peripheral Neuropathy with or without Impaired Intellectual Development (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear membrane (ortholog) 8 106626761 106664066 - 22301074;30032202 116907856 MODEL JAAIVD010000027;XM_032911045 XP_032766936 germinal-center associated nuclear protein protein-coding 625923105 Serping1 serpin family G member 1 ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN negative regulation of complement activation, lectin pathway (ortholog); PARTICIPATES IN coagulation cascade pathway; kallikrein-kinin cascade pathway; ASSOCIATED WITH acquired angioedema (ortholog); Acute Experimental Pancreatitis (ortholog); Acute Lung Injury (ortholog); FOUND IN extracellular region (ortholog) 5 62145700 62155776 - 30032202 116901588 MODEL JAAIVD010000023;XM_032903604 XP_032759495 plasma protease C1 inhibitor protein-coding 625923117 Sppl2b signal peptide peptidase like 2B ENCODES a protein that exhibits aspartic endopeptidase activity, intramembrane cleaving (ortholog); protein homodimerization activity (ortholog); INVOLVED IN membrane protein ectodomain proteolysis (ortholog); membrane protein intracellular domain proteolysis (ortholog); membrane protein proteolysis (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endosome membrane (ortholog); Golgi-associated vesicle membrane (ortholog) 1 154017770 154030592 - 22301074;30032202 116906590 MODEL JAAIVD010000025;XM_032909367 XP_032765258 signal peptide peptidase-like 2B protein-coding 625923135 Trnaa-agc transfer RNA alanine (anticodon AGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 16 24074206 24074278 + 116886022 MODEL JAAIVD010000004 trna 625923136 LOC116907311 ribose-phosphate pyrophosphokinase 1-like 8 27267155 27268122 - 116907311 MODEL JAAIVD010000027 pseudo 625923137 Znf879 zinc finger protein 879 9 33487016 33493646 - 30032202 116908592 MODEL JAAIVD010000002;XM_032911811 XP_032767702 protein-coding 625923144 Qng1 Q-nucleotide N-glycosylase 1 ENCODES a protein that exhibits queuosine nucleosidase activity (ortholog); INVOLVED IN nucleoside salvage (ortholog); FOUND IN cytosol (ortholog) 14 79750496 79758101 + 116883609 MODEL JAAIVD010000009;XM_032884797;XM_032884799 XP_032740688;XP_032740690 C14H9orf64 chromosome 14 C9orf64 homolog;queuosine salvage protein protein-coding 625923155 Znf568 zinc finger protein 568 2 166024934 166060676 - 30032202 116892336 MODEL JAAIVD010000001;XM_032893970;XM_032893972 XP_032749861;XP_032749863 protein-coding 625923169 LOC116904656 U7 small nuclear RNA 6 23142901 23142962 + 116904656 MODEL JAAIVD010000024;XR_004388356 snrna 625923172 Gpt2 glutamic--pyruvic transaminase 2 ENCODES a protein that exhibits L-alanine:2-oxoglutarate transaminase activity (ortholog); INVOLVED IN 2-oxoglutarate metabolic process (ortholog); cellular response to insulin stimulus (ortholog); gluconeogenesis (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Chronic Hepatitis C (ortholog); genetic disease (ortholog); FOUND IN extracellular region (ortholog); mitochondrion (ortholog) 17 14231346 14264269 - 22301074;30032202 116886255 MODEL JAAIVD010000011;XM_032887676 XP_032743567 alanine aminotransferase 2 protein-coding 625923187 LOC116907495 olfactory receptor 145-like 8 32189707 32190657 + 22301074;30032202 116907495 MODEL JAAIVD010000027;XM_032910488 XP_032766379 protein-coding 625923190 LOC116910604 cytochrome b5 domain-containing protein 1 9 49003440 49007924 - 116910604 MODEL JAAIVD010000002;XM_032914545;XM_032914546 XP_032770436;XP_032770437 protein-coding 625923204 Ext1 exostosin glycosyltransferase 1 ENCODES a protein that exhibits glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity (ortholog); glycosyltransferase activity (ortholog); N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase activity (ortholog); INVOLVED IN antigen processing and presentation (ortholog); axon guidance (ortholog); basement membrane organization (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); breast cancer (ortholog); FOUND IN catalytic complex (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 1 227557062 227833666 - 22301074;30032202 116911393 MODEL JAAIVD010000025;XM_032915354 XP_032771245 exostosin-1 protein-coding 625923219 Chrna7 cholinergic receptor nicotinic alpha 7 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); activation of protein kinase C activity (ortholog); associative learning (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH Alzheimer's disease (ortholog); attention deficit hyperactivity disorder (ortholog); Auditory Perceptual Disorders (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); apical plasma membrane (ortholog); asymmetric synapse (ortholog) 2 136950666 137071611 - 22301074;30032202 116892013 MODEL JAAIVD010000001;XM_032893475;XM_032893476;XM_032893477 XP_032749366;XP_032749367;XP_032749368 neuronal acetylcholine receptor subunit alpha-7 protein-coding 625923238 Epop elongin BC and polycomb repressive complex 2 associated protein ENCODES a protein that exhibits chromatin binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN neuron fate commitment (ortholog); regulation of transcription by RNA polymerase II (ortholog); stem cell differentiation (ortholog); FOUND IN elongin complex (ortholog); ESC/E(Z) complex (ortholog); nucleoplasm (ortholog) 9 56753920 56756288 + 30032202 116909995 MODEL JAAIVD010000002;XM_032913779 XP_032769670 elongin BC and Polycomb repressive complex 2-associated protein protein-coding 625923243 LOC116892793 zinc finger protein OZF-like 2 185950273 185955533 + 22301074 116892793 MODEL JAAIVD010000001;XM_032894664 XP_032750555 protein-coding 625923251 LOC116894635 uncharacterized LOC116894635 2 195150098 195164523 + 116894635 MODEL JAAIVD010000001;XR_004387032 ncrna 625923256 Prepl prolyl endopeptidase like ENCODES a protein that exhibits peptidase activity (ortholog); INVOLVED IN Golgi to plasma membrane protein transport (ortholog); regulation of synaptic vesicle exocytosis (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 22 (ortholog); genetic disease (ortholog); FOUND IN cytoskeleton (ortholog); Golgi apparatus (ortholog); mitochondrion (ortholog) 7 7840658 7869457 + 22301074;30032202 116905771 MODEL JAAIVD010000026;XM_032908739;XM_032908740;XM_032908741;XM_032908742 XP_032764630;XP_032764631;XP_032764632;XP_032764633 prolyl endopeptidase-like protein-coding 625923284 Abhd4 abhydrolase domain containing 4, N-acyl phospholipase B ENCODES a protein that exhibits phosphatidylcholine lysophospholipase A1 activity (ortholog); INVOLVED IN N-acylethanolamine metabolic process (ortholog); N-acylphosphatidylethanolamine metabolic process (ortholog) 12 70737694 70749791 - 30032202 116913526 MODEL JAAIVD010000007;XM_032917726 XP_032773617 (Lyso)-N-acylphosphatidylethanolamine lipase protein-coding 625923295 Kcnn3 potassium calcium-activated channel subfamily N member 3 ENCODES a protein that exhibits calmodulin binding (ortholog); inward rectifier potassium channel activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); potassium ion transport (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; schizophrenia pathway; ASSOCIATED WITH atrial fibrillation (ortholog); genetic disease (ortholog); paranoid schizophrenia (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); filopodium (ortholog) 3 64000188 64149496 - 22301074;30032202 116896635 MODEL JAAIVD010000012;XM_032897952;XM_032897953 XP_032753843;XP_032753844 small conductance calcium-activated potassium channel protein 3 protein-coding 625923310 LOC116885652 histidine triad nucleotide-binding protein 1-like 16 7438512 7438971 - 116885652 MODEL JAAIVD010000004 pseudo 625923311 LOC116906107 glyceraldehyde-3-phosphate dehydrogenase-like 7 77190187 77192254 + 116906107 MODEL JAAIVD010000026 pseudo 625923312 LOC116904518 40S ribosomal protein S8-like 6 7045136 7045763 + 116904518 MODEL JAAIVD010000024 pseudo 625923313 Fam170a family with sequence similarity 170 member A INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of protein import into nucleus (ortholog); single fertilization (ortholog); FOUND IN nucleus (ortholog) 15 36347645 36352338 + 30032202 116884844 MODEL JAAIVD010000010;XM_032886082;XM_032886083;XM_032886084 XP_032741973;XP_032741974;XP_032741975 protein FAM170A protein-coding 625923327 LOC116902669 U6 spliceosomal RNA 5 127342929 127343034 - 116902669 MODEL JAAIVD010000023;XR_004388231 snrna 625923330 LOC116906383 small nucleolar RNA SNORD113/SNORD114 family 7 127257076 127257150 + 116906383 MODEL JAAIVD010000026;XR_004388653 snorna 625923333 Tmem169 transmembrane protein 169 4 145871231 145895247 + 116899482 MODEL JAAIVD010000003;XM_032901315;XM_032901316 XP_032757206;XP_032757207 protein-coding 625923343 Trir telomerase RNA component interacting RNase ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); 5'-3' exonuclease activity (ortholog); INVOLVED IN rRNA catabolic process (ortholog) 17 15261114 15264529 - 30032202 116886163 MODEL JAAIVD010000011;XM_032887535;XM_032887536;XM_032887537 XP_032743426;XP_032743427;XP_032743428 protein-coding 625923358 LOC116905605 eukaryotic initiation factor 4A-II-like 7 12768314 12769714 + 116905605 MODEL JAAIVD010000026 pseudo 625923359 Eml2 EMAP like 2 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); microtubule binding (ortholog); tubulin binding (ortholog); INVOLVED IN negative regulation of microtubule polymerization (ortholog); regulation of microtubule nucleation (ortholog); FOUND IN mitotic spindle (ortholog) 2 171412261 171443791 - 30032202 116892545 MODEL JAAIVD010000001;XM_032894310;XM_032894312;XM_032894313;XM_032894314;XR_004386958 XP_032750201;XP_032750203;XP_032750204;XP_032750205 echinoderm microtubule-associated protein-like 2 protein-coding 625923396 Tmigd3 transmembrane and immunoglobulin domain containing 3 INVOLVED IN negative regulation of cell migration (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); COVID-19 (ortholog); FOUND IN membrane (ortholog) 3 52191198 52269727 - 30032202 116896415 MODEL JAAIVD010000012;XM_032897558 XP_032753449 protein-coding 625923407 LOC116908056 uncharacterized LOC116908056 8 38709651 38710716 + 116908056 MODEL JAAIVD010000027;XR_004388871 ncrna 625923411 LOC116896768 histone H3.3-like 3 74231781 74232292 - 116896768 MODEL JAAIVD010000012 pseudo 625923412 Ly6g6f lymphocyte antigen 6 family member G6F 18 7678928 7684189 - 116887503 MODEL JAAIVD010000013;XM_032889121 XP_032745012 lymphocyte antigen 6 complex locus protein G6f protein-coding 625923420 Dph2 diphthamide biosynthesis 2 ENCODES a protein that exhibits 2-(3-amino-3-carboxypropyl)histidine synthase activity (ortholog); INVOLVED IN protein histidyl modification to diphthamide (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); diphthamide deficiency syndrome (ortholog); diphthamide deficiency syndrome 2 (ortholog); FOUND IN 2-(3-amino-3-carboxypropyl)histidine synthase complex (ortholog); cytosol (ortholog); perinuclear region of cytoplasm (ortholog) 1 39129729 39132956 + 22301074;30032202 116898022 MODEL JAAIVD010000025;XM_032899415 XP_032755306 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 protein-coding 625923430 LOC116900842 glyceraldehyde-3-phosphate dehydrogenase-like 5 55303132 55372720 + 116900842 MODEL JAAIVD010000023 pseudo 625923431 Elf3 E74 like ETS transcription factor 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN anatomical structure morphogenesis (ortholog); blastocyst development (ortholog); extracellular matrix organization (ortholog); ASSOCIATED WITH biliary tract benign neoplasm (ortholog); Lung Injury (ortholog); FOUND IN nucleoplasm (ortholog) 10 453250 458143 + 22301074;30032202 116911398 MODEL JAAIVD010000005;XM_032915358;XM_032915359 XP_032771249;XP_032771250 ETS-related transcription factor Elf-3 protein-coding 625923448 Ripply3 ripply transcriptional repressor 3 INVOLVED IN heart development (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog) 4 50301905 50309852 - 30032202 116897968 MODEL JAAIVD010000003;XM_032899368 XP_032755259 protein ripply3 protein-coding 625923456 LOC116907330 olfactory receptor 8B3-like 8 31703305 31717655 + 116907330 MODEL JAAIVD010000027 pseudo 625923457 Tspan14 tetraspanin 14 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN positive regulation of Notch signaling pathway (ortholog); protein localization to plasma membrane (ortholog); protein maturation (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog); tetraspanin-enriched microdomain (ortholog) 13 19424006 19482174 - 22301074;30032202 116914474 MODEL JAAIVD010000008;XM_032918774 XP_032774665 tetraspanin-14 protein-coding 625923470 Ubox5 U-box domain containing 5 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin protein ligase binding (ortholog); ubiquitin-ubiquitin ligase activity (ortholog); INVOLVED IN protein polyubiquitination (ortholog); FOUND IN nuclear body (ortholog); nucleus (ortholog) 5 110331622 110342135 - 30032202 116901972 MODEL JAAIVD010000023;XM_032904211 XP_032760102 RING finger protein 37 protein-coding 625923477 Lrrc70 leucine rich repeat containing 70 INVOLVED IN positive regulation of response to cytokine stimulus (ortholog); FOUND IN plasma membrane (ortholog) 3 190794723 190798544 + 116897217 MODEL JAAIVD010000012;XM_032898935 XP_032754826 leucine-rich repeat-containing protein 70 protein-coding 625923483 LOC116904659 U7 small nuclear RNA 6 151845497 151845558 + 116904659 MODEL JAAIVD010000024;XR_004388359 snrna 625923486 LOC116905568 60S ribosomal protein L11-like 7 90381334 90381839 + 22301074;30032202 116905568 MODEL JAAIVD010000026;XM_032908588 XP_032764479 protein-coding 625923490 LOC116902859 olfactory receptor 6B1 6 97617070 97618014 - 22301074 116902859 MODEL JAAIVD010000024;XM_032905188 XP_032761079 protein-coding 625923493 Tbxt T-box transcription factor T ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN cardiac muscle cell myoblast differentiation (ortholog); cellular response to retinoic acid (ortholog); heart morphogenesis (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 40 (ortholog); chordoma (ortholog); neural tube defect (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 187292226 187299835 + 22301074;30032202 116894625 MODEL JAAIVD010000001;XM_032896341;XM_032896342;XM_032896344 XP_032752232;XP_032752233;XP_032752235 protein-coding 625923509 LOC116884855 nucleolar protein 4-like 15 20746272 20810759 + 116884855 MODEL JAAIVD010000010;XM_032886098 XP_032741989 protein-coding 625923515 Tie1 tyrosine kinase with immunoglobulin like and EGF like domains 1 INVOLVED IN aortic valve morphogenesis (ortholog); blood vessel development (ortholog); branching involved in lymph vessel morphogenesis (ortholog); ASSOCIATED WITH Lymphatic Malformation 11 (ortholog); FOUND IN plasma membrane (ortholog) 1 38541631 38560976 + 22301074;30032202 116897778 MODEL JAAIVD010000025;XM_032899207 XP_032755098 tyrosine-protein kinase receptor Tie-1 protein-coding 625923542 LOC116914535 polyadenylate-binding protein 1-like 13 35043771 35045694 - 30032202 116914535 MODEL JAAIVD010000008;XM_032918864 XP_032774755 protein-coding 625923547 LOC116889462 small nucleolar RNA SNORA72 X 59394564 59394683 + 116889462 MODEL JAAIVD010000014 pseudo 625923548 LOC116899219 U1 small nuclear ribonucleoprotein C-like 4 88855885 88856298 - 22301074;30032202 116899219 MODEL JAAIVD010000003;XM_032900816 XP_032756707 protein-coding 625923551 LOC116895520 60S ribosomal protein L39-like 3 117367837 117368019 - 116895520 MODEL JAAIVD010000012 pseudo 625923552 LOC116887459 selection and upkeep of intraepithelial T-cells protein 1-like 1 44584524 44612686 + 30032202 116887459 MODEL JAAIVD010000025;XM_032889070 XP_032744961 protein-coding 625923563 LOC116893215 olfactory receptor 14A2-like 2 114556946 114557902 + 22301074;30032202 116893215 MODEL JAAIVD010000001;XM_032895101 XP_032750992 protein-coding 625923566 LOC116893409 uncharacterized protein C1orf115 homolog 2 173444244 173444690 + 116893409 MODEL JAAIVD010000001 pseudo 625923567 LOC116909831 uncharacterized LOC116909831 9 8537001 8550183 + 116909831 MODEL JAAIVD010000002;XR_004389103 ncrna 625923572 Ccrl2 C-C motif chemokine receptor like 2 ENCODES a protein that exhibits CCR chemokine receptor binding (ortholog); chemokine receptor binding (ortholog); INVOLVED IN inflammatory response (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); COVID-19 (ortholog); skin disease (ortholog); FOUND IN plasma membrane (ortholog) 8 101632679 101634752 - 22301074;30032202 116906839 MODEL JAAIVD010000027;XM_032909727;XM_032909728 XP_032765618;XP_032765619 C-C chemokine receptor-like 2 protein-coding 625923582 LOC116915069 uncharacterized LOC116915069 13 46171554 46194870 - 116915069 MODEL JAAIVD010000008;XR_004389792 ncrna 625923587 Slc38a7 solute carrier family 38 member 7 ENCODES a protein that exhibits L-asparagine:sodium symporter activity (ortholog); L-glutamine:sodium symporter activity (ortholog); INVOLVED IN asparagine transport (ortholog); L-glutamine transport (ortholog); sodium ion transport (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN axon (ortholog); lysosomal membrane (ortholog); neuronal cell body (ortholog) 17 2652784 2667871 - 30032202 116886409 MODEL JAAIVD010000011;XM_032887883 XP_032743774 putative sodium-coupled neutral amino acid transporter 7 protein-coding 625923603 Btg3 BTG anti-proliferation factor 3 INVOLVED IN negative regulation of mitotic cell cycle (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH cholestasis (ortholog); renal cell carcinoma (ortholog); systemic juvenile rheumatoid arthritis (ortholog); FOUND IN cytoplasm (ortholog) 4 63701579 63717622 + 30032202 116899044 MODEL JAAIVD010000003;XM_032900511;XM_032900512 XP_032756402;XP_032756403 protein BTG3 protein-coding 625923615 LOC116892946 60S ribosomal protein L36a-like 2 210346709 210347069 + 116892946 MODEL JAAIVD010000001 pseudo 625923616 LOC116908547 L-amino-acid oxidase-like 9 39938631 39945450 - 30032202 116908547 MODEL JAAIVD010000002;XM_032911747 XP_032767638 protein-coding 625923624 Bcas2 BCAS2 pre-mRNA processing factor INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); dendrite development (ortholog); dendrite morphogenesis (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH breast cancer (ortholog); diffuse large B-cell lymphoma (ortholog); FOUND IN DNA replication factor A complex (ortholog); nuclear speck (ortholog); nucleus (ortholog) 3 54860663 54868447 - 22301074;30032202 116896448 MODEL JAAIVD010000012;XM_032897603 XP_032753494 pre-mRNA-splicing factor SPF27 protein-coding 625923635 LOC116898327 prothymosin alpha-like 4 42220472 42220983 + 116898327 MODEL JAAIVD010000003 pseudo 625923636 C6H12orf57 chromosome 6 C12orf57 homolog INVOLVED IN camera-type eye morphogenesis (ortholog); cognition (ortholog); corpus callosum morphogenesis (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog) 6 23142917 23144539 + 30032202 116903283 MODEL JAAIVD010000024;XM_032905705;XM_032905706 XP_032761596;XP_032761597 protein C10 protein-coding 625923646 LOC116908312 60S ribosomal protein L10-like 8 37343361 37343808 + 116908312 MODEL JAAIVD010000027 pseudo 625923647 LOC116907328 olfactory receptor 8B3-like 8 31644193 31645137 + 22301074;30032202 116907328 MODEL JAAIVD010000027;XM_032910274 XP_032766165 protein-coding 625923651 LOC116894847 U6 spliceosomal RNA 2 213149291 213149397 + 116894847 MODEL JAAIVD010000001;XR_004387062 snrna 625923654 Ttbk2 tau tubulin kinase 2 ENCODES a protein that exhibits kinesin binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cerebellar granular layer development (ortholog); cerebellar granule cell precursor tangential migration (ortholog); cerebellum development (ortholog); ASSOCIATED WITH autosomal dominant cerebellar ataxia (ortholog); genetic disease (ortholog); spastic ataxia (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); ciliary base (ortholog) 5 98868337 98974331 - 22301074;30032202 116901844 MODEL JAAIVD010000023;XM_032904025;XM_032904027;XM_032904028 XP_032759916;XP_032759918;XP_032759919 tau-tubulin kinase 2 protein-coding 625923678 LOC116895083 small nucleolar RNA SNORD88 2 155285863 155285953 - 116895083 MODEL JAAIVD010000001;XR_004387250 snorna 625923681 LOC116895667 nucleoside diphosphate kinase B-like 3 196099960 196100400 - 116895667 MODEL JAAIVD010000012 pseudo 625923682 Col3a1 collagen type III alpha 1 chain ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); integrin binding (ortholog); platelet-derived growth factor binding (ortholog); INVOLVED IN aorta development (ortholog); aorta smooth muscle tissue morphogenesis (ortholog); basement membrane organization (ortholog); PARTICIPATES IN endothelin signaling pathway; syndecan signaling pathway; ASSOCIATED WITH Acute Otitis Media (ortholog); alcoholic liver cirrhosis (ortholog); Aneurysm (ortholog); FOUND IN collagen trimer (ortholog); collagen type III trimer (ortholog); extracellular matrix (ortholog) 4 121181557 121217281 + 22301074 116899353 MODEL JAAIVD010000003;XM_032901060 XP_032756951 collagen alpha-1(III) chain protein-coding 625923737 LOC116906332 U6 spliceosomal RNA 7 91514281 91514380 + 116906332 MODEL JAAIVD010000026 pseudo 625923738 Pou2af2 POU class 2 homeobox associating factor 2 ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); transcription coactivator activity (ortholog); FOUND IN nucleus (ortholog) 8 45726943 45767386 - 22301074 116907432 MODEL JAAIVD010000027;XM_032910402 XP_032766293 C8H11orf53 chromosome 8 C11orf53 homolog;uncharacterized protein C11orf53 homolog protein-coding 625923747 Snupn snurportin 1 INVOLVED IN cytoskeleton organization (ortholog); protein complex oligomerization (ortholog); protein tetramerization (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 29 (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 8 50855358 50885967 + 22301074;30032202 116906904 MODEL JAAIVD010000027;XM_032909817;XM_032909818;XM_032909819;XM_032909820;XM_032909821 XP_032765708;XP_032765709;XP_032765710;XP_032765711;XP_032765712 snurportin-1 protein-coding 625923771 Pigu phosphatidylinositol glycan anchor biosynthesis class U ENCODES a protein that exhibits GPI anchor binding (ortholog); INVOLVED IN attachment of GPI anchor to protein (ortholog); GPI anchor biosynthetic process (ortholog); GPI anchored protein biosynthesis (ortholog); ASSOCIATED WITH genetic disease (ortholog); Glycosylphosphatidylinositol Biosynthesis Defect 21 (ortholog); FOUND IN GPI-anchor transamidase complex (ortholog); plasma membrane (ortholog) 5 134633870 134705097 - 30032202 116902173 MODEL JAAIVD010000023;XM_032904515;XM_032904516;XM_032904518 XP_032760406;XP_032760407;XP_032760409 phosphatidylinositol glycan anchor biosynthesis class U protein protein-coding 625923793 Dab2 DAB adaptor protein 2 ENCODES a protein that exhibits AP-2 adaptor complex binding (ortholog); cargo receptor activity (ortholog); clathrin binding (ortholog); INVOLVED IN cell morphogenesis (ortholog); cellular response to epidermal growth factor stimulus (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); metabolic acidosis (ortholog); FOUND IN apical plasma membrane (ortholog); clathrin coat of coated pit (ortholog); clathrin-coated pit (ortholog) 3 174928625 174981571 + 30032202 116897149 MODEL JAAIVD010000012;XM_032898817 XP_032754708 disabled homolog 2 protein-coding 625923812 Rpl18 ribosomal protein L18 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); liver regeneration (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Diamond-Blackfan anemia 18 (ortholog); Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic large ribosomal subunit (ortholog) 2 153800281 153803069 - 22301074;30032202 116892129 MODEL JAAIVD010000001;XM_032893616 XP_032749507 60S ribosomal protein L18 protein-coding 625923822 LOC116884088 small nucleolar RNA SNORA17 14 43343990 43344101 - 116884088 MODEL JAAIVD010000009 pseudo 625923823 Cnot10 CCR4-NOT transcription complex subunit 10 PARTICIPATES IN microRNA pathway; FOUND IN CCR4-NOT complex (ortholog) 8 105194140 105243645 - 22301074;30032202 116907818 MODEL JAAIVD010000027;XM_032910996;XM_032910997;XM_032910998;XM_032910999;XM_032911000;XM_032911001 XP_032766887;XP_032766888;XP_032766889;XP_032766890;XP_032766891;XP_032766892 protein-coding 625923856 LOC116898167 60S ribosomal protein L12-like 4 123846604 123847129 + 116898167 MODEL JAAIVD010000003 pseudo 625923857 Ppp1r11 protein phosphatase 1 regulatory inhibitor subunit 11 ENCODES a protein that exhibits phosphatase binding (ortholog); protein phosphatase inhibitor activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN defense response to Gram-positive bacterium (ortholog); negative regulation of cytokine production (ortholog); ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytoplasm (ortholog) 18 9926108 9929653 - 22301074;30032202 116887715 MODEL JAAIVD010000013;XM_032889313 XP_032745204 E3 ubiquitin-protein ligase PPP1R11 protein-coding 625923864 LOC116894741 U1 small nuclear ribonucleoprotein C-like 2 111312981 111313689 - 116894741 MODEL JAAIVD010000001 pseudo 625923865 Prlr prolactin receptor ENCODES a protein that exhibits lipid binding (ortholog); peptide hormone binding (ortholog); prolactin receptor activity (ortholog); INVOLVED IN activation of Janus kinase activity (ortholog); activation of transmembrane receptor protein tyrosine kinase activity (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); autistic disorder (ortholog); carcinoma (ortholog); FOUND IN cell surface (ortholog) 3 170375333 170544420 - 22301074;30032202 116897129 MODEL JAAIVD010000012;XM_032898785;XM_032898787;XM_032898788;XM_032898789;XM_032898790 XP_032754676;XP_032754678;XP_032754679;XP_032754680;XP_032754681 protein-coding 625923891 LOC116887356 olfactory receptor 14J1-like 18 10820772 10821773 - 22301074;30032202 116887356 MODEL JAAIVD010000013;XM_032888951 XP_032744842 protein-coding 625923894 Alx3 ALX homeobox 3 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN embryonic forelimb morphogenesis (ortholog); embryonic hindlimb morphogenesis (ortholog); embryonic skeletal system morphogenesis (ortholog); ASSOCIATED WITH frontonasal dysplasia (ortholog); frontonasal dysplasia 1 (ortholog); genetic disease (ortholog) 3 50655263 50665816 - 22301074;30032202 116895364 MODEL JAAIVD010000012;XM_032896661 XP_032752552 homeobox protein aristaless-like 3 protein-coding 625923902 LOC116898491 aspartate aminotransferase, mitochondrial-like 4 121732780 121741068 + 116898491 MODEL JAAIVD010000003 pseudo 625923903 LOC116907608 olfactory receptor 8D2-like 8 32620987 32621922 + 22301074;30032202 116907608 MODEL JAAIVD010000027;XM_032910663 XP_032766554 protein-coding 625923907 Tbc1d4 TBC1 domain family member 4 INVOLVED IN cellular response to insulin stimulus (ortholog); negative regulation of vesicle fusion (ortholog); vesicle-mediated transport (ortholog); PARTICIPATES IN altered insulin responsive facilitative sugar transporter mediated glucose transport pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH acanthosis nigricans (ortholog); Congenital Hyperinsulinism (ortholog); Insulin Resistance (ortholog); FOUND IN cytosol (ortholog); vesicle (ortholog) 12 22978594 23166155 + 116913440 MODEL JAAIVD010000007;XM_032917640 XP_032773531 protein-coding 625923930 LOC116899832 small Cajal body-specific RNA 6 4 159890895 159891163 + 116899832 MODEL JAAIVD010000003;XR_004387831 ncrna 625923933 Kctd1 potassium channel tetramerization domain containing 1 ENCODES a protein that exhibits identical protein binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of Notch signaling pathway (ortholog); ASSOCIATED WITH Familial Cirrhosis (ortholog); scalp-ear-nipple syndrome (ortholog); FOUND IN nucleus (ortholog) 15 28783714 28877050 + 22301074;30032202 116884490 MODEL JAAIVD010000010;XM_032885611;XM_032885612 XP_032741502;XP_032741503 BTB/POZ domain-containing protein KCTD1 protein-coding 625923945 Gbf1 golgi brefeldin A resistant guanine nucleotide exchange factor 1 ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN cell activation involved in immune response (ortholog); COPI coating of Golgi vesicle (ortholog); endoplasmic reticulum-Golgi intermediate compartment organization (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; ASSOCIATED WITH axonal neuropathy (ortholog); cataract 11 multiple types (ortholog); Charcot-Marie-Tooth disease dominant intermediate A (ortholog); FOUND IN cell leading edge (ortholog); cis-Golgi network (ortholog); endoplasmic reticulum lumen (ortholog) 2 45619080 45747997 + 22301074 116891239 MODEL JAAIVD010000001;XM_032892102;XM_032892103;XM_032892104;XM_032892106;XM_032892107 XP_032747993;XP_032747994;XP_032747995;XP_032747997;XP_032747998 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 protein-coding 625924002 Dpy19l4 dpy-19 like 4 1 132388476 132444349 + 30032202 116903409 MODEL JAAIVD010000025;XM_032905927 XP_032761818 probable C-mannosyltransferase DPY19L4 protein-coding 625924025 Znf462 zinc finger protein 462 ASSOCIATED WITH atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); cleft lip (ortholog); FOUND IN nucleoplasm (ortholog) 1 96440707 96571616 - 30032202 116901762 MODEL JAAIVD010000025;XM_032903902 XP_032759793 protein-coding 625924042 Tnfaip8l1 TNF alpha induced protein 8 like 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of TOR signaling (ortholog); FOUND IN cytoplasm (ortholog) 4 87549509 87559834 + 22301074;30032202 116899173 MODEL JAAIVD010000003;XM_032900744;XM_032900745 XP_032756635;XP_032756636 tumor necrosis factor alpha-induced protein 8-like protein 1 protein-coding 625924051 LOC116892784 fatty acid-binding protein 5-like 2 21799855 21800320 - 116892784 MODEL JAAIVD010000001 pseudo 625924052 Isyna1 inositol-3-phosphate synthase 1 ENCODES a protein that exhibits inositol-3-phosphate synthase activity (ortholog); INVOLVED IN inositol biosynthetic process (ortholog); negative regulation of inositol biosynthetic process (ortholog); PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); polycystic ovary syndrome (ortholog) 13 12841071 12843978 + 22301074;30032202 116914765 MODEL JAAIVD010000008;XM_032919214 XP_032775105 protein-coding 625924067 Fam161b FAM161 centrosomal protein B FOUND IN cytoplasmic microtubule (ortholog); microtubule cytoskeleton (ortholog) 7 98449841 98465249 - 30032202 116906159 MODEL JAAIVD010000026;XM_032909141 XP_032765032 protein FAM161B protein-coding 625924079 Tmem19 transmembrane protein 19 ASSOCIATED WITH basal cell carcinoma (ortholog) 1 193500646 193526767 - 22301074;30032202 116909024 MODEL JAAIVD010000025;XM_032912504;XM_032912512;XM_032912519 XP_032768395;XP_032768403;XP_032768410 protein-coding 625924096 Spink13 serine peptidase inhibitor Kazal type 13 INVOLVED IN negative regulation of acrosome reaction (ortholog) X 6562169 6567821 + 22301074 116888235 MODEL JAAIVD010000014;XM_032889526 XP_032745417 serine protease inhibitor Kazal-type 13 protein-coding 625924104 Plagl2 PLAG1 like zinc finger 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN chylomicron assembly (ortholog); lipid metabolic process (ortholog); positive regulation of intrinsic apoptotic signaling pathway (ortholog); FOUND IN nucleus (ortholog) 5 132544629 132557838 - 30032202 116902140 MODEL JAAIVD010000023;XM_032904467 XP_032760358 zinc finger protein PLAGL2 protein-coding 625924111 LOC116902598 small nucleolar RNA SNORA17 5 44774086 44774217 + 116902598 MODEL JAAIVD010000023;XR_004388187 snorna 625924114 Map3k2 mitogen-activated protein kinase kinase kinase 2 ENCODES a protein that exhibits MAP kinase kinase kinase activity (ortholog); protein kinase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); intracellular signal transduction (ortholog); protein phosphorylation (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; Erk5 MAPK signaling pathway; FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 15 11999349 12031587 - 22301074 116884983 MODEL JAAIVD010000010;XM_032886202 XP_032742093 protein-coding 625924133 Tmem125 transmembrane protein 125 1 38497010 38499607 + 116897767 MODEL JAAIVD010000025;XM_032899200 XP_032755091 protein-coding 625924139 Ncoa7 nuclear receptor coactivator 7 ENCODES a protein that exhibits nuclear receptor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN negative regulation of cellular response to oxidative stress (ortholog); negative regulation of peptidyl-cysteine S-nitrosylation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog) 2 204707318 204859470 - 30032202 116892927 MODEL JAAIVD010000001;XM_032894858;XM_032894859;XM_032894860;XM_032894861;XM_032894862;XM_032894863 XP_032750749;XP_032750750;XP_032750751;XP_032750752;XP_032750753;XP_032750754 protein-coding 625924174 Slfn11 schlafen family member 11 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); RNA endonuclease activity (ortholog); tRNA binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); defense response to virus (ortholog); DNA damage response (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); site of DNA damage (ortholog) 9 87524685 87536460 + 30032202 116908546 MODEL JAAIVD010000002;XM_032911746 XP_032767637 protein-coding 625924182 LOC116904264 histone-lysine N-methyltransferase SETMAR-like 6 38746363 38757665 - 116904264 MODEL JAAIVD010000024 pseudo 625924183 LOC116887829 nucleoside diphosphate kinase A-like X 36198136 36214993 + 116887829 MODEL JAAIVD010000014 pseudo 625924184 Fam184b family with sequence similarity 184 member B ASSOCIATED WITH substance-related disorder (ortholog) 11 60237602 60353064 + 116912445 MODEL JAAIVD010000006;XM_032916513 XP_032772404 protein FAM184B protein-coding 625924204 LOC116894629 small nuclear ribonucleoprotein Sm D3-like 2 188945263 188945789 - 22301074;30032202 116894629 MODEL JAAIVD010000001;XM_032896347 XP_032752238 protein-coding 625924209 LOC116900048 nucleoside diphosphate kinase B-like 5 14931811 15126028 + 116900048 MODEL JAAIVD010000023 pseudo 625924210 LOC116886331 Krueppel-like factor 4 1 14619735 14621881 - 116886331 MODEL JAAIVD010000025 pseudo 625924211 LOC116897883 ribosomal oxygenase 2-like 4 29662294 29663671 - 116897883 MODEL JAAIVD010000003 pseudo 625924212 Plpp2 phospholipid phosphatase 2 ENCODES a protein that exhibits ceramide-1-phosphate phosphatase activity (ortholog); phosphatidate phosphatase activity (ortholog); sphingosine-1-phosphate phosphatase activity (ortholog); INVOLVED IN ceramide metabolic process (ortholog); phospholipid dephosphorylation (ortholog); phospholipid metabolic process (ortholog); PARTICIPATES IN D-glycericacidemia pathway; familial lipoprotein lipase deficiency pathway; glycerol kinase deficiency pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN caveola (ortholog); early endosome (ortholog); endoplasmic reticulum (ortholog) 1 155341851 155349845 + 30032202 116905795 MODEL JAAIVD010000025;XM_032908772 XP_032764663 protein-coding 625924222 LOC116905645 40S ribosomal protein S15a-like 7 5422959 5423339 - 22301074;30032202 116905645 MODEL JAAIVD010000026;XM_032908620 XP_032764511 protein-coding 625924225 Sdad1 SDA1 domain containing 1 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); FOUND IN nucleolus (ortholog) 11 5134364 5161255 - 30032202 116912529 MODEL JAAIVD010000006;XM_032916628 XP_032772519 protein SDA1 homolog protein-coding 625924250 LOC116896771 transmembrane protein 258-like 3 74764183 74764410 - 22301074;30032202 116896771 MODEL JAAIVD010000012;XM_032898229 XP_032754120 protein-coding 625924253 LOC116888114 homeobox protein Rhox13-like X 101469924 101476390 + 30032202 116888114 MODEL JAAIVD010000014;XM_032889468 XP_032745359 protein-coding 625924258 LOC116889432 U6 spliceosomal RNA X 71185960 71186067 + 116889432 MODEL JAAIVD010000014;XR_004386394 snrna 625924261 LOC116887707 class I histocompatibility antigen, Gogo-A*0101 alpha chain-like 18 9646550 9648835 + 30032202 116887707 MODEL JAAIVD010000013;XM_032889307 XP_032745198 protein-coding 625924269 LOC116883179 uncharacterized LOC116883179 14 75283782 75285232 + 116883179 MODEL JAAIVD010000009;XR_004385732 ncrna 625924273 Pkd1l1 polycystin 1 like 1, transient receptor potential channel interacting INVOLVED IN detection of nodal flow (ortholog); determination of left/right symmetry (ortholog); heart development (ortholog); ASSOCIATED WITH autistic disorder (ortholog); congenital chylothorax (ortholog); genetic disease (ortholog); FOUND IN calcium channel complex (ortholog); ciliary membrane (ortholog); cilium (ortholog) 11 77866738 78043077 - 22301074;30032202 116912036 MODEL JAAIVD010000006;XM_032915919 XP_032771810 polycystic kidney disease protein 1-like 1 protein-coding 625924330 LOC116911623 glyceraldehyde-3-phosphate dehydrogenase-like 10 30594418 30601129 + 116911623 MODEL JAAIVD010000005 pseudo 625924331 Cep192 centrosomal protein 192 ENCODES a protein that exhibits phosphatase binding (ortholog); INVOLVED IN centrosome-templated microtubule nucleation (ortholog); mitotic spindle assembly (ortholog); protein localization to centrosome (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 15 63384285 63467028 - 30032202 116885015 MODEL JAAIVD010000010;XM_032886256 XP_032742147 centrosomal protein of 192 kDa protein-coding 625924379 Serpine2 serpin family E member 2 ENCODES a protein that exhibits glycosaminoglycan binding (ortholog); heparin binding (ortholog); serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN blood coagulation (ortholog); cerebellar granular layer morphogenesis (ortholog); dense core granule biogenesis (ortholog); PARTICIPATES IN fibrinolysis pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); asthma (ortholog); brain edema (ortholog); FOUND IN cytosol (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) 4 152852977 152916762 - 30032202 116899553 MODEL JAAIVD010000003;XM_032901447 XP_032757338 glia-derived nexin protein-coding 625924392 Wnk1 WNK lysine deficient protein kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); molecular condensate scaffold activity (ortholog); INVOLVED IN cell volume homeostasis (ortholog); cellular hyperosmotic response (ortholog); cellular response to calcium ion (ortholog); PARTICIPATES IN Erk5 MAPK signaling pathway; ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); genetic disease (ortholog); hereditary sensory and autonomic neuropathy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); GABA-ergic synapse (ortholog) 6 26698182 26822592 + 22301074;30032202 116903336 MODEL JAAIVD010000024;XM_032905780;XM_032905781;XM_032905783;XM_032905784 XP_032761671;XP_032761672;XP_032761674;XP_032761675 serine/threonine-protein kinase WNK1 protein-coding 625924431 Lamc1 laminin subunit gamma 1 ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); glycosphingolipid binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN cell adhesion (ortholog); cell migration (ortholog); chromatin organization (ortholog); ASSOCIATED WITH aortic disease (ortholog); COVID-19 (ortholog); Gliosis (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); laminin-111 trimer (ortholog) 10 32695130 32816269 - 30032202 116911769 MODEL JAAIVD010000005;XM_032915763 XP_032771654 laminin subunit gamma-1 protein-coding 625924463 Tafa2 TAFA chemokine like family member 2 INVOLVED IN memory (ortholog); visual learning (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Cognitive Dysfunction (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 1 201710981 202175250 + 30032202 116909652 MODEL JAAIVD010000025;XM_032913308;XM_032913314;XM_032913322;XM_032913330 XP_032769199;XP_032769205;XP_032769213;XP_032769221 chemokine-like protein TAFA-2 protein-coding 625924483 Ing3 inhibitor of growth family member 3 ENCODES a protein that exhibits histone H2A acetyltransferase activity (ortholog); histone H3K4me3 reader activity (ortholog); histone H4 acetyltransferase activity (ortholog); INVOLVED IN positive regulation of double-strand break repair via homologous recombination (ortholog); regulation of cell cycle (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN NuA4 histone acetyltransferase complex (ortholog); nucleoplasm (ortholog); piccolo histone acetyltransferase complex (ortholog) 6 117200001 117226619 - 30032202 116904046 MODEL JAAIVD010000024;XM_032906904;XM_032906905;XM_032906906 XP_032762795;XP_032762796;XP_032762797 inhibitor of growth protein 3 protein-coding 625924502 Pex7 peroxisomal biogenesis factor 7 ENCODES a protein that exhibits enzyme binding (ortholog); peroxisome matrix targeting signal-2 binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN endochondral ossification (ortholog); ether lipid biosynthetic process (ortholog); fatty acid beta-oxidation (ortholog); ASSOCIATED WITH connective tissue disease (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); peroxisomal matrix (ortholog); peroxisome (ortholog) 2 216683526 216742032 + 22301074;30032202 116892977 MODEL JAAIVD010000001;XM_032894936 XP_032750827 protein-coding 625924516 LOC116900294 olfactory receptor 8K3-like 5 63661017 63661958 - 22301074;30032202 116900294 MODEL JAAIVD010000023;XM_032902050 XP_032757941 protein-coding 625924519 Septin2 septin 2 ENCODES a protein that exhibits enzyme regulator activity (ortholog); identical protein binding (ortholog); INVOLVED IN cilium assembly (ortholog); cytoskeleton organization (ortholog); neuron projection development (ortholog); ASSOCIATED WITH methylmalonic acidemia (ortholog); FOUND IN actin cytoskeleton (ortholog); axoneme (ortholog); cell surface (ortholog) 4 165410785 165444069 + 22301074;30032202 116899666 MODEL JAAIVD010000003;XM_032901680;XM_032901681 XP_032757571;XP_032757572 septin-2 protein-coding 625924539 Arhgef16 Rho guanine nucleotide exchange factor 16 ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); PDZ domain binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); cell chemotaxis (ortholog); positive regulation of protein localization to plasma membrane (ortholog) 1 6426293 6441688 + 22301074;30032202 116892118 MODEL JAAIVD010000025;XM_032893604;XM_032893612 XP_032749495;XP_032749503 protein-coding 625924563 LOC116890568 small nucleolar RNA SNORA17 1 160173236 160173357 + 116890568 MODEL JAAIVD010000025 pseudo 625924564 LOC116884884 high mobility group protein B1-like 15 33366585 33375750 + 116884884 MODEL JAAIVD010000010 pseudo 625924565 LOC116892504 kinectin-like 1 62504880 62516569 + 116892504 MODEL JAAIVD010000025 pseudo 625924566 Thop1 thimet oligopeptidase 1 ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); peptidase activity (ortholog); peptide binding (ortholog); INVOLVED IN intracellular signal transduction (ortholog); peptide catabolic process (ortholog); peptide metabolic process (ortholog); FOUND IN cytosol (ortholog) 1 153807071 153819320 - 22301074;30032202 116904592 MODEL JAAIVD010000025;XM_032907391 XP_032763282 thimet oligopeptidase protein-coding 625924582 LOC116897403 U1 spliceosomal RNA 3 60840322 60840486 - 116897403 MODEL JAAIVD010000012;XR_004387446 snrna 625924585 Gtpbp6 GTP binding protein 6 ENCODES a protein that exhibits ribosomal large subunit binding (ortholog); INVOLVED IN mitochondrial large ribosomal subunit assembly (ortholog); FOUND IN mitochondrion (ortholog) 16 44253464 44257451 + 22301074;30032202 116885160 MODEL JAAIVD010000004;XM_032886371 XP_032742262 GTP binding protein 6 (putative);putative GTP-binding protein 6 protein-coding 625924599 LOC116883871 prolactin-7A2-like 14 46708494 46716769 - 22301074;30032202 116883871 MODEL JAAIVD010000009;XM_032885137 XP_032741028 protein-coding 625924609 LOC116898092 cytochrome b-c1 complex subunit 7-like 4 95307468 95307964 - 116898092 MODEL JAAIVD010000003 pseudo 625924610 Axin1 axin 1 ENCODES a protein that exhibits armadillo repeat domain binding (ortholog); beta-catenin binding (ortholog); enzyme binding (ortholog); INVOLVED IN axial mesoderm development (ortholog); axial mesoderm formation (ortholog); beta-catenin destruction complex assembly (ortholog); PARTICIPATES IN altered Wnt signaling, canonical pathway; colorectal cancer pathway; N-cadherin signaling pathway; ASSOCIATED WITH Caudal Duplication Anomaly (ortholog); colon cancer (ortholog); CRANIOMETADIAPHYSEAL OSTEOSCLEROSIS WITH HIP DYSPLASIA (ortholog); FOUND IN beta-catenin destruction complex (ortholog); cell cortex (ortholog); cell periphery (ortholog) 9 3400823 3455972 + 30032202 116910556 MODEL JAAIVD010000002;XM_032914465;XM_032914466;XM_032914467 XP_032770356;XP_032770357;XP_032770358 axin-1 protein-coding 625924629 LOC116911423 sphingolipid delta(4)-desaturase DES1-like 10 59425817 59432858 + 22301074;30032202 116911423 MODEL JAAIVD010000005;XM_032915389 XP_032771280 protein-coding 625924634 LOC116895852 40S ribosomal protein S6-like 3 90107550 90108274 + 116895852 MODEL JAAIVD010000012 pseudo 625924635 LOC116900178 heterogeneous nuclear ribonucleoprotein K-like 5 33792860 33794233 - 116900178 MODEL JAAIVD010000023 pseudo 625924636 LOC116910350 CMRF35-like molecule 3 9 69101128 69110083 + 30032202 116910350 MODEL JAAIVD010000002;XM_032914205 XP_032770096 protein-coding 625924643 LOC116889449 U6 spliceosomal RNA X 65853920 65854022 - 116889449 MODEL JAAIVD010000014;XR_004386407 snrna 625924646 Tcea1 transcription elongation factor A1 ENCODES a protein that exhibits transcription elongation factor activity (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of mRNA catabolic process (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; FOUND IN nucleoplasm (ortholog); transcription factor TFIID complex (ortholog) 1 140221586 140258669 + 22301074;30032202 116903712 MODEL JAAIVD010000025;XM_032906391;XM_032906398 XP_032762282;XP_032762289 transcription elongation factor A protein 1 protein-coding 625924663 LOC116906040 aldo-keto reductase family 1 member B1-like 7 41899911 41905894 + 116906040 MODEL JAAIVD010000026 pseudo 625924664 LOC116913554 uncharacterized LOC116913554 12 2521647 2523496 + 116913554 MODEL JAAIVD010000007;XR_004389630 ncrna 625924668 LOC116900862 olfactory receptor 1052-like 5 64198797 64199616 - 116900862 MODEL JAAIVD010000023 pseudo 625924669 Arfgap1 ARF GTPase activating protein 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN regulation of endocytosis (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); nervous system disease (ortholog); FOUND IN Golgi membrane (ortholog); postsynaptic density (ortholog); synapse (ortholog) 5 158074427 158089957 + 22301074;30032202 116902425 MODEL JAAIVD010000023;XM_032904955 XP_032760846 ADP ribosylation factor GTPase activating protein 1;ADP-ribosylation factor GTPase-activating protein 1 protein-coding 625924688 LOC116884354 developmental pluripotency-associated protein 4-like 15 37167919 37171504 - 116884354 MODEL JAAIVD010000010 pseudo 625924689 Pabpc5 poly(A) binding protein cytoplasmic 5 FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog) X 49469182 49471170 - 22301074;30032202 116889246 MODEL JAAIVD010000014;XM_032890400 XP_032746291 polyadenylate-binding protein 5 protein-coding 625924695 LOC116908576 uncharacterized LOC116908576 9 2646841 2649128 + 116908576 MODEL JAAIVD010000002;XR_004388997;XR_004388998 ncrna 625924703 Bard1 BRCA1 associated RING domain 1 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); RNA binding (ortholog); INVOLVED IN cellular response to follicle-stimulating hormone stimulus (ortholog); cellular response to ionizing radiation (ortholog); cellular response to oxidative stress (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); breast carcinoma (ortholog); FOUND IN BRCA1-A complex (ortholog); BRCA1-BARD1 complex (ortholog); cytoplasm (ortholog) 4 144480608 144545664 - 22301074 116898537 MODEL JAAIVD010000003;XM_032899756 XP_032755647 BRCA1-associated RING domain protein 1 protein-coding 625924716 Ino80d INO80 complex subunit D INVOLVED IN chromatin remodeling (ortholog); positive regulation of DNA repair (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway 4 137042908 137100398 - 30032202 116899442 MODEL JAAIVD010000003;XM_032901199;XM_032901200;XM_032901201;XM_032901202;XM_032901204;XM_032901205;XM_032901206;XM_032901207;XM_032901208;XM_032901209;XM_032901210;XM_032901211;XM_032901212 XP_032757090;XP_032757091;XP_032757092;XP_032757093;XP_032757095;XP_032757096;XP_032757097;XP_032757098;XP_032757099;XP_032757100;XP_032757101;XP_032757102;XP_032757103 protein-coding 625924764 Prkd3 protein kinase D3 ENCODES a protein that exhibits kinase activity (ortholog); ASSOCIATED WITH Weight Gain (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) 7 14215751 14282932 + 22301074;30032202 116905893 MODEL JAAIVD010000026;XM_032908881 XP_032764772 serine/threonine-protein kinase D3 protein-coding 625924786 Eif5a2 eukaryotic translation initiation factor 5A2 ASSOCIATED WITH Premature Aging (ortholog) 3 125878857 125894558 - 22301074;30032202 116896984 MODEL JAAIVD010000012;XM_032898574;XM_032898575 XP_032754465;XP_032754466 eukaryotic translation initiation factor 5A-2 protein-coding 625924801 Comp cartilage oligomeric matrix protein ENCODES a protein that exhibits BMP binding (ortholog); calcium ion binding (ortholog); collagen binding (ortholog); INVOLVED IN apoptotic process (ortholog); artery morphogenesis (ortholog); blood coagulation (ortholog); ASSOCIATED WITH carpal tunnel syndrome 2 (ortholog); connective tissue disease (ortholog); genetic disease (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog); protein-containing complex (ortholog) 13 12631320 12639397 + 22301074 116914259 MODEL JAAIVD010000008;XM_032918471 XP_032774362 protein-coding 625924823 LOC116900476 olfactory receptor 4C46-like 5 71539668 71540603 + 22301074 116900476 MODEL JAAIVD010000023;XM_032902212 XP_032758103 protein-coding 625924826 Ahsg alpha 2-HS glycoprotein ENCODES a protein that exhibits receptor signaling protein tyrosine kinase inhibitor activity (ortholog); INVOLVED IN acute-phase response (ortholog); animal organ regeneration (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); alopecia-mental retardation syndrome 1 (ortholog); calcinosis (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog); Golgi apparatus (ortholog) 4 7573204 7579681 + 22301074;30032202 116898723 MODEL JAAIVD010000003;XM_032900021;XM_032900022;XM_032900023;XM_032900024;XM_032900025 XP_032755912;XP_032755913;XP_032755914;XP_032755915;XP_032755916 alpha-2-HS-glycoprotein protein-coding 625924851 Mdfi MyoD family inhibitor ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); protein sequestering activity (ortholog); INVOLVED IN dorsal/ventral axis specification (ortholog); embryonic skeletal system morphogenesis (ortholog); maintenance of protein location in cell (ortholog); FOUND IN nucleus (ortholog) 4 82043222 82061342 + 116898038 MODEL JAAIVD010000003;XM_032899429;XM_032899430;XM_032899431 XP_032755320;XP_032755321;XP_032755322 protein-coding 625924870 LOC116887670 40S ribosomal protein SA-like 1 53797166 53798018 + 116887670 MODEL JAAIVD010000025 pseudo 625924871 LOC116890364 U6 spliceosomal RNA 1 40142311 40142414 + 116890364 MODEL JAAIVD010000025;XR_004386582 snrna 625924874 LOC116900933 40S ribosomal protein S8-like 5 80742974 80754181 - 116900933 MODEL JAAIVD010000023 pseudo 625924875 LOC116899229 sulfotransferase 1C2-like 4 90951574 90967344 + 22301074;30032202 116899229 MODEL JAAIVD010000003;XM_032900829 XP_032756720 protein-coding 625924888 Txndc11 thioredoxin domain containing 11 FOUND IN cytosol (ortholog); plasma membrane (ortholog) 9 11196075 11251281 + 116910396 MODEL JAAIVD010000002;XM_032914235;XM_032914236 XP_032770126;XP_032770127 thioredoxin domain-containing protein 11 protein-coding 625924906 H1-2 H1.2 linker histone, cluster member ENCODES a protein that exhibits chromatin DNA binding (ortholog); histone H3K27me3 reader activity (ortholog); structural constituent of chromatin (ortholog); INVOLVED IN chromosome condensation (ortholog); facultative heterochromatin formation (ortholog); regulation of mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); FOUND IN euchromatin (ortholog); heterochromatin (ortholog); nucleolus (ortholog) 14 42732674 42734152 + 22301074 116883558 MODEL JAAIVD010000009;XM_032884738 XP_032740629 histone H1.2 protein-coding 625924911 Dclk1 doublecortin like kinase 1 ENCODES a protein that exhibits protein kinase activity (ortholog); INVOLVED IN axon extension (ortholog); axonogenesis (ortholog); brain development (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); FOUND IN axon (ortholog); glutamatergic synapse (ortholog); growth cone (ortholog) 3 98908664 99197469 - 22301074;30032202 116896861 MODEL JAAIVD010000012;XM_032898371;XM_032898372;XM_032898373;XM_032898374;XM_032898375;XM_032898376;XM_032898378;XM_032898379;XM_032898380;XM_032898381;XM_032898382;XM_032898383 XP_032754262;XP_032754263;XP_032754264;XP_032754265;XP_032754266;XP_032754267;XP_032754269;XP_032754270;XP_032754271;XP_032754272;XP_032754273;XP_032754274 serine/threonine-protein kinase DCLK1 protein-coding 625924972 LOC116914086 uncharacterized LOC116914086 12 2780541 2782931 + 116914086 MODEL JAAIVD010000007;XR_004389665 ncrna 625924976 Tspan15 tetraspanin 15 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN negative regulation of Notch signaling pathway (ortholog); protein localization to plasma membrane (ortholog); protein maturation (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog); tetraspanin-enriched microdomain (ortholog) 18 28011214 28055518 - 22301074;30032202 116887190 MODEL JAAIVD010000013;XM_032888744 XP_032744635 tetraspanin-15 protein-coding 625924988 Atp6v1g3 ATPase H+ transporting V1 subunit G3 ENCODES a protein that exhibits ATPase binding (ortholog); proton-transporting ATPase activity, rotational mechanism (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) 10 18635875 18650264 + 22301074;30032202 116911681 MODEL JAAIVD010000005;XM_032915634 XP_032771525 V-type proton ATPase subunit G 3 protein-coding 625924995 Cpb1 carboxypeptidase B1 ENCODES a protein that exhibits carboxypeptidase activity (ortholog); INVOLVED IN proteolysis (ortholog) 3 133859247 133891322 + 22301074;30032202 116895566 MODEL JAAIVD010000012;XM_032896799 XP_032752690 carboxypeptidase B protein-coding 625925010 LOC116895180 N-alpha-acetyltransferase 11-like 3 146742479 146743303 - 116895180 MODEL JAAIVD010000012 pseudo 625925011 LOC116911080 uncharacterized LOC116911080 10 72959400 72959780 - 116911080 MODEL JAAIVD010000005;XR_004389310 ncrna 625925015 LOC116906493 small nucleolar RNA U54 7 72894961 72895028 + 116906493 MODEL JAAIVD010000026;XR_004388735 snorna 625925018 Med13 mediator complex subunit 13 ENCODES a protein that exhibits nuclear thyroid hormone receptor binding (ortholog); transcription coactivator activity (ortholog); transcription coregulator activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); autosomal dominant intellectual developmental disorder 13 (ortholog); FOUND IN mediator complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 9 84417434 84503302 + 22301074;30032202 116909358 MODEL JAAIVD010000002;XM_032912906 XP_032768797 mediator of RNA polymerase II transcription subunit 13 protein-coding 625925052 LOC116901089 putative uncharacterized protein FLJ40606 5 153079479 153079928 + 116901089 MODEL JAAIVD010000023;XM_032902653 XP_032758544 protein-coding 625925055 Mrpl51 mitochondrial ribosomal protein L51 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN translation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrial ribosome (ortholog); mitochondrion (ortholog) 6 22707401 22708622 - 22301074;30032202 116903255 MODEL JAAIVD010000024;XM_032905637 XP_032761528 39S ribosomal protein L51, mitochondrial protein-coding 625925062 Znf362 zinc finger protein 362 1 29329547 29363699 + 116896359 MODEL JAAIVD010000025;XM_032897470;XM_032897480;XM_032897489;XM_032897496 XP_032753361;XP_032753371;XP_032753380;XP_032753387 protein-coding 625925084 LOC116889456 U6 spliceosomal RNA X 80225768 80225878 + 116889456 MODEL JAAIVD010000014;XR_004386413 snrna 625925087 LOC116913177 60S ribosomal protein L6-like 12 57291297 57292332 - 116913177 MODEL JAAIVD010000007 pseudo 625925088 Ccer1 coiled-coil glutamate rich protein 1 INVOLVED IN sperm DNA condensation (ortholog); spermatogenesis (ortholog); FOUND IN nucleus (ortholog) 1 176888319 176890073 + 116889997 MODEL JAAIVD010000025;XM_032890783 XP_032746674 coiled-coil domain-containing glutamate-rich protein 1 protein-coding 625925093 Lrrtm3 leucine rich repeat transmembrane neuronal 3 INVOLVED IN positive regulation of amyloid-beta formation (ortholog); positive regulation of synapse assembly (ortholog); regulation of presynapse assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog) 18 22626081 22798641 + 22301074;30032202 116886936 MODEL JAAIVD010000013;XM_032888433 XP_032744324 leucine-rich repeat transmembrane neuronal protein 3 protein-coding 625925100 LOC116887855 uncharacterized protein C6orf136 homolog X 43693488 43698480 - 116887855 MODEL JAAIVD010000014 pseudo 625925101 M6pr mannose-6-phosphate receptor, cation dependent ENCODES a protein that exhibits cargo receptor activity (ortholog); retromer complex binding (ortholog); INVOLVED IN Golgi to lysosome transport (ortholog); lysosomal transport (ortholog); secretion of lysosomal enzymes (ortholog); ASSOCIATED WITH Disease Progression (ortholog); Prostatic Neoplasms (ortholog); renal cell carcinoma (ortholog); FOUND IN endosome (ortholog); late endosome (ortholog); perinuclear region of cytoplasm (ortholog) 6 24790087 24799047 - 22301074;30032202 116903313 MODEL JAAIVD010000024;XM_032905747;XM_032905748 XP_032761638;XP_032761639 cation-dependent mannose-6-phosphate receptor protein-coding 625925115 LOC116884835 uncharacterized LOC116884835 15 13540073 13543200 + 116884835 MODEL JAAIVD010000010;XR_004385902 ncrna 625925120 LOC116890998 myotubularin-related protein 6 2 12910643 12912884 - 22301074;30032202 116890998 MODEL JAAIVD010000001;XM_032891676 XP_032747567 protein-coding 625925125 Dbx2 developing brain homeobox 2 INVOLVED IN epidermal growth factor receptor signaling pathway (ortholog); G2/M transition of mitotic cell cycle (ortholog); gene expression (ortholog) 1 268469308 268498942 - 22301074;30032202 116884361 MODEL JAAIVD010000025;XM_032885489 XP_032741380 homeobox protein DBX2 protein-coding 625925132 Sirt6 sirtuin 6 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); damaged DNA binding (ortholog); INVOLVED IN base-excision repair (ortholog); cardiac muscle cell differentiation (ortholog); cellular response to angiotensin (ortholog); PARTICIPATES IN histone modification pathway; Sirtuin mediated pathway; ASSOCIATED WITH Cardiomegaly (ortholog); Cardiotoxicity (ortholog); endomyocardial fibrosis (ortholog); FOUND IN chromatin (ortholog); chromosome, subtelomeric region (ortholog); endoplasmic reticulum (ortholog) 1 153262840 153268176 + 22301074 116904169 MODEL JAAIVD010000025;XM_032907074;XM_032907083 XP_032762965;XP_032762974 NAD-dependent protein deacetylase sirtuin-6 protein-coding 625925147 Ddc dopa decarboxylase ENCODES a protein that exhibits 5-hydroxy-L-tryptophan decarboxylase activity (ortholog); amino acid binding (ortholog); aromatic-L-amino-acid decarboxylase activity (ortholog); INVOLVED IN aminergic neurotransmitter loading into synaptic vesicle (ortholog); cellular response to alkaloid (ortholog); cellular response to growth factor stimulus (ortholog); PARTICIPATES IN alkaptonuria pathway; aromatic L-amino acid decarboxylase deficiency pathway; catecholamine biosynthetic pathway; ASSOCIATED WITH aromatic L-amino acid decarboxylase deficiency (ortholog); bipolar disorder (ortholog); Developmental Disabilities (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); neuronal cell body (ortholog) 11 80731189 80847449 - 22301074;30032202 116912430 MODEL JAAIVD010000006;XM_032916495;XM_032916496;XM_032916497 XP_032772386;XP_032772387;XP_032772388 aromatic-L-amino-acid decarboxylase protein-coding 625925174 LOC116910204 T-cell immunoglobulin and mucin domain-containing protein 4-like 9 29578414 29612581 + 116910204 MODEL JAAIVD010000002;XM_032914067 XP_032769958 protein-coding 625925185 LOC116890462 small nucleolar RNA SNORA5 1 95175989 95176073 + 116890462 MODEL JAAIVD010000025;XR_004386654 snorna 625925188 Paip2b poly(A) binding protein interacting protein 2B ENCODES a protein that exhibits mRNA regulatory element binding translation repressor activity (ortholog); INVOLVED IN negative regulation of translational initiation (ortholog) 6 62401326 62438031 + 30032202 116904322 MODEL JAAIVD010000024;XM_032907230 XP_032763121 polyadenylate-binding protein-interacting protein 2B protein-coding 625925198 Slc25a44 solute carrier family 25 member 44 ENCODES a protein that exhibits branched-chain amino acid transmembrane transporter activity (ortholog); INVOLVED IN branched-chain amino acid catabolic process (ortholog); branched-chain amino acid transport (ortholog); regulation of cold-induced thermogenesis (ortholog); FOUND IN mitochondrion (ortholog) 3 65138604 65151593 + 22301074;30032202 116896687 MODEL JAAIVD010000012;XM_032898074;XM_032898075;XM_032898076 XP_032753965;XP_032753966;XP_032753967 protein-coding 625925212 LOC116914156 U6atac minor spliceosomal RNA 12 1216171 1216298 - 116914156 MODEL JAAIVD010000007;XR_004389706 snrna 625925215 LOC116902877 anionic trypsin-1 6 99122416 99127129 - 22301074;30032202 116902877 MODEL JAAIVD010000024;XM_032905208 XP_032761099 protein-coding 625925224 Dctn2 dynactin subunit 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase binding (ortholog); spectrin binding (ortholog); INVOLVED IN dynein-driven meiotic oscillatory nuclear movement (ortholog); melanosome transport (ortholog); microtubule-based process (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); synucleinopathy (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); dynactin complex (ortholog) 1 205701554 205716732 + 22301074;30032202 116909967 MODEL JAAIVD010000025;XM_032913746;XM_032913753;XM_032913762 XP_032769637;XP_032769644;XP_032769653 protein-coding 625925248 Psmd12 proteasome 26S subunit, non-ATPase 12 INVOLVED IN regulation of AMPA receptor activity (ortholog); ASSOCIATED WITH contact dermatitis (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog); proteasome regulatory particle (ortholog) 9 71623413 71641817 - 30032202 116908910 MODEL JAAIVD010000002;XM_032912364 XP_032768255 26S proteasome non-ATPase regulatory subunit 12 protein-coding 625925263 Jak1 Janus kinase 1 ENCODES a protein that exhibits CCR5 chemokine receptor binding (ortholog); growth hormone receptor binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); cellular response to interleukin-3 (ortholog); cellular response to interleukin-7 (ortholog); PARTICIPATES IN Interleukin-10 signaling pathway; interleukin-2 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); Autoinflammation, Immune Dysregulation, and Eosinophilia (ortholog); Chronic Hepatitis B (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); extrinsic component of cytoplasmic side of plasma membrane (ortholog) 1 53283387 53390176 + 22301074;30032202 116899721 MODEL JAAIVD010000025;XM_032901765 XP_032757656 tyrosine-protein kinase JAK1 protein-coding 625925292 LOC116906490 small nucleolar RNA U13 7 82418292 82418398 + 116906490 MODEL JAAIVD010000026;XR_004388733 snorna 625925295 Mrps2 mitochondrial ribosomal protein S2 INVOLVED IN mitochondrial ribosome assembly (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 36 (ortholog); FOUND IN mitochondrial small ribosomal subunit (ortholog); mitochondrion (ortholog) 5 8198419 8201637 - 22301074;30032202 116901231 MODEL JAAIVD010000023;XM_032902968 XP_032758859 28S ribosomal protein S2, mitochondrial protein-coding 625925303 Cep85 centrosomal protein 85 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cell migration (ortholog); centriole assembly (ortholog); centriole replication (ortholog); FOUND IN cell cortex (ortholog); centriole (ortholog); centrosome (ortholog) 1 24062541 24110810 + 30032202 116894829 MODEL JAAIVD010000025;XM_032896497;XM_032896498 XP_032752388;XP_032752389 centrosomal protein of 85 kDa protein-coding 625925324 Nadk NAD kinase ENCODES a protein that exhibits NAD+ kinase activity (ortholog); INVOLVED IN NADP+ biosynthetic process (ortholog); positive regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); PARTICIPATES IN niacin metabolic pathway; nicotinamide adenine dinucleotide metabolic pathway; FOUND IN cytosol (ortholog) 1 5109201 5136666 - 22301074;30032202 116891895 MODEL JAAIVD010000025;XM_032893314;XM_032893322 XP_032749205;XP_032749213 protein-coding 625925343 Tex44 testis expressed 44 FOUND IN cytoplasm (ortholog) 4 158560553 158561965 + 116898251 MODEL JAAIVD010000003;XM_032899602 XP_032755493 testis-expressed protein 44 protein-coding 625925348 Foxk2 forkhead box K2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN canonical glycolysis (ortholog); intracellular glucose homeostasis (ortholog); negative regulation of autophagy (ortholog); ASSOCIATED WITH male infertility (ortholog); primary ovarian insufficiency (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 9 62708782 62758991 - 22301074;30032202 116908559 MODEL JAAIVD010000002;XM_032911764 XP_032767655 forkhead box protein K2 protein-coding 625925361 Prkdc protein kinase, DNA-activated, catalytic subunit ENCODES a protein that exhibits DNA-dependent protein kinase activity (ortholog); double-stranded DNA binding (ortholog); enzyme binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); B cell lineage commitment (ortholog); brain development (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Brain Hypoxia-Ischemia (ortholog); breast cancer (ortholog); FOUND IN chromatin (ortholog); DNA-dependent protein kinase-DNA ligase 4 complex (ortholog); nonhomologous end joining complex (ortholog) 4 986537 1186900 + 22301074;30032202 116898606 MODEL JAAIVD010000003;XM_032899802 XP_032755693 DNA-dependent protein kinase catalytic subunit protein-coding 625925451 LOC116905777 60S ribosomal protein L27a-like 7 32671640 32672076 - 116905777 MODEL JAAIVD010000026 pseudo 625925452 LOC116906124 60S ribosomal protein L15-like 7 85447437 85448047 - 116906124 MODEL JAAIVD010000026 pseudo 625925453 Tnni2 troponin I2, fast skeletal type ENCODES a protein that exhibits actin binding (ortholog); troponin T binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); relaxation of skeletal muscle (ortholog); skeletal muscle contraction (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); distal arthrogryposis (ortholog); distal arthrogryposis type 2B (ortholog); FOUND IN nucleus (ortholog); troponin complex (ortholog) 2 7032089 7034706 - 22301074;30032202 116893617 MODEL JAAIVD010000001;XM_032895331 XP_032751222 troponin I, fast skeletal muscle protein-coding 625925465 Knstrn kinetochore localized astrin (SPAG5) binding protein ENCODES a protein that exhibits microtubule plus-end binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cell migration (ortholog); cellular response to epidermal growth factor stimulus (ortholog); chromosome segregation (ortholog); ASSOCIATED WITH actinic keratosis (ortholog); COVID-19 (ortholog); Roifman-Chitayat Syndrome (ortholog); FOUND IN centriolar satellite (ortholog); kinetochore (ortholog); microtubule organizing center (ortholog) 5 96989743 97009109 + 30032202 116901789 MODEL JAAIVD010000023;XM_032903937 XP_032759828 small kinetochore-associated protein protein-coding 625925477 LOC116893490 vomeronasal type-1 receptor 4-like 2 182479389 182480312 - 22301074;30032202 116893490 MODEL JAAIVD010000001;XM_032895237 XP_032751128 protein-coding 625925480 Nelfe negative elongation factor complex member E ENCODES a protein that exhibits chromatin binding (ortholog); mRNA binding (ortholog); RNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); negative regulation of transcription elongation by RNA polymerase II (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; FOUND IN chromatin (ortholog); NELF complex (ortholog); nuclear body (ortholog) 18 7442750 7448449 + 30032202 116887318 MODEL JAAIVD010000013;XM_032888907;XM_032888908;XM_032888909;XM_032888911 XP_032744798;XP_032744799;XP_032744800;XP_032744802 negative elongation factor E protein-coding 625925502 LOC116902066 uncharacterized LOC116902066 5 126564478 126565871 + 116902066 MODEL JAAIVD010000023;XR_004388037 ncrna 625925506 LOC116893313 protein SET-like 2 152141309 152144366 + 116893313 MODEL JAAIVD010000001 pseudo 625925507 LOC116887631 protein ILRUN-like 18 10579490 10580149 + 116887631 MODEL JAAIVD010000013 pseudo 625925508 LOC116886407 lysophosphatidylcholine acyltransferase 2 17 18567126 18576585 - 22301074;30032202 116886407 MODEL JAAIVD010000011;XM_032887881 XP_032743772 protein-coding 625925516 LOC116891098 renalase 2 33427229 33429932 - 30032202 116891098 MODEL JAAIVD010000001;XM_032891812 XP_032747703 protein-coding 625925524 LOC116910648 U6 spliceosomal RNA 9 90805035 90805137 + 116910648 MODEL JAAIVD010000002;XR_004389184 snrna 625925527 Znf518a zinc finger protein 518A 2 40036920 40042993 + 30032202 116891156 MODEL JAAIVD010000001;XM_032891948 XP_032747839 protein-coding 625925532 LOC116883588 uncharacterized LOC116883588 14 42549282 42553325 - 116883588 MODEL JAAIVD010000009;XR_004385773 ncrna 625925536 LOC116891706 60S ribosomal protein L35-like 2 96035446 96035848 + 116891706 MODEL JAAIVD010000001 pseudo 625925537 LOC116910417 40S ribosomal protein S15-like 9 42897239 42898454 - 116910417 MODEL JAAIVD010000002 pseudo 625925538 B3gnt6 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 ENCODES a protein that exhibits galactosyltransferase activity (ortholog); ASSOCIATED WITH Childhood Schizophrenia (ortholog) 2 96474978 96477407 - 22301074;30032202 116891711 MODEL JAAIVD010000001;XM_032892982 XP_032748873 acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase protein-coding 625925543 LOC116905644 60S ribosomal protein L7-like 7 418780 419557 + 116905644 MODEL JAAIVD010000026 pseudo 625925544 LOC116907985 uncharacterized LOC116907985 8 113027906 113038895 + 116907985 MODEL JAAIVD010000027;XR_004388865 ncrna 625925549 LOC116904693 small nucleolar RNA SNORA48 6 129049644 129049787 - 116904693 MODEL JAAIVD010000024;XR_004388389 snorna 625925552 LOC116912008 T-complex protein 1 subunit zeta-like 11 56622746 56649583 - 116912008 MODEL JAAIVD010000006 pseudo 625925553 LOC116908703 uncharacterized LOC116908703 9 59066841 59074102 - 116908703 MODEL JAAIVD010000002;XR_004389013 ncrna 625925558 LOC116889567 U4 spliceosomal RNA X 122773372 122773560 - 116889567 MODEL JAAIVD010000014 pseudo 625925559 LOC116911619 elongation factor 1-gamma-like 10 50813136 50815018 - 116911619 MODEL JAAIVD010000005 pseudo 625925560 Ca12 carbonic anhydrase 12 INVOLVED IN chloride ion homeostasis (ortholog); estrous cycle (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); colorectal adenocarcinoma (ortholog); colorectal carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) 8 61073724 61128356 + 22301074;30032202 116908315 MODEL JAAIVD010000027;XM_032911603;XM_032911604 XP_032767494;XP_032767495 protein-coding 625925576 LOC116893654 olfactory receptor 10V1-like 2 11027265 11028221 + 22301074 116893654 MODEL JAAIVD010000001;XM_032895371 XP_032751262 protein-coding 625925579 Atad2b ATPase family AAA domain containing 2B ENCODES a protein that exhibits histone reader activity (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 7 25557028 25690336 + 22301074;30032202 116906290 MODEL JAAIVD010000026;XM_032909186 XP_032765077 ATPase family AAA domain-containing protein 2B protein-coding 625925611 Fam78b family with sequence similarity 78 member B 10 46336122 46413664 + 116910843 MODEL JAAIVD010000005;XM_032914593 XP_032770484 protein FAM78B protein-coding 625925617 LOC116900616 solute carrier organic anion transporter family member 6A1-like 5 105019829 105069036 - 22301074;30032202 116900616 MODEL JAAIVD010000023;XM_032902335 XP_032758226 protein-coding 625925629 LOC116911925 eukaryotic translation initiation factor 3 subunit J 11 52945600 52946661 + 22301074;30032202 116911925 MODEL JAAIVD010000006;XM_032915811 XP_032771702 protein-coding 625925634 LOC116889447 U6 spliceosomal RNA X 23516893 23516996 + 116889447 MODEL JAAIVD010000014;XR_004386406 snrna 625925637 LOC116913611 pyruvate kinase PKM-like 12 397278 398830 + 116913611 MODEL JAAIVD010000007 pseudo 625925638 LOC116899244 glutathione S-transferase alpha-3 4 98647156 98663852 - 22301074;30032202 116899244 MODEL JAAIVD010000003;XM_032900849 XP_032756740 protein-coding 625925649 LOC116908881 keratin, type I cytoskeletal 17 9 59552905 59558430 - 22301074;30032202 116908881 MODEL JAAIVD010000002;XM_032912324;XM_032912325 XP_032768215;XP_032768216 protein-coding 625925665 Tmem18 transmembrane protein 18 INVOLVED IN bone regeneration (ortholog); cell migration (ortholog); eating behavior (ortholog); ASSOCIATED WITH chronic obstructive pulmonary disease (ortholog); obesity (ortholog); pneumonia (ortholog); FOUND IN nuclear membrane (ortholog) 7 44010107 44017365 + 30032202 116904940 MODEL JAAIVD010000026;XM_032907582;XM_032907583;XM_032907584 XP_032763473;XP_032763474;XP_032763475 protein-coding 625925682 LOC116902904 eukaryotic translation initiation factor 1-like 6 107734617 107735089 - 116902904 MODEL JAAIVD010000024 pseudo 625925683 Xrcc6 X-ray repair cross complementing 6 ENCODES a protein that exhibits 5'-deoxyribose-5-phosphate lyase activity (ortholog); ATP hydrolysis activity (ortholog); ATP-dependent activity, acting on DNA (ortholog); INVOLVED IN activation of innate immune response (ortholog); cellular hyperosmotic salinity response (ortholog); cellular response to gamma radiation (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH Animal Disease Models (ortholog); basal cell carcinoma (ortholog); lung adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); DNA-dependent protein kinase-DNA ligase 4 complex (ortholog); Ku70:Ku80 complex (ortholog) 1 251759143 251779168 + 22301074;30032202 116914171 MODEL JAAIVD010000025;XM_032918413 XP_032774304 X-ray repair cross-complementing protein 6 protein-coding 625925698 LOC116893730 olfactory receptor 9I1-like 2 13857806 13858751 - 116893730 MODEL JAAIVD010000001 pseudo 625925699 Sumf1 sulfatase modifying factor 1 ENCODES a protein that exhibits cupric ion binding (ortholog); formylglycine-generating oxidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN post-translational protein modification (ortholog); protein oxidation (ortholog); ASSOCIATED WITH genetic disease (ortholog); mucosulfatidosis (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN endoplasmic reticulum (ortholog) 6 38597572 38677083 + 30032202 116903441 MODEL JAAIVD010000024;XM_032905995 XP_032761886 formylglycine-generating enzyme protein-coding 625925712 LOC116911013 uncharacterized LOC116911013 10 4567037 4567799 - 116911013 MODEL JAAIVD010000005;XR_004389298 ncrna 625925716 Elp1 elongator acetyltransferase complex subunit 1 ENCODES a protein that exhibits ATP binding (ortholog); protein kinase activity (ortholog); INVOLVED IN I-kappaB phosphorylation (ortholog); tRNA wobble uridine modification (ortholog); ASSOCIATED WITH asthma (ortholog); Breast Neoplasms (ortholog); Charcot-Marie-Tooth disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); elongator holoenzyme complex (ortholog) 1 94814145 94863622 + 22301074;30032202 116901690 MODEL JAAIVD010000025;XM_032903819 XP_032759710 elongator complex protein 1 protein-coding 625925757 LOC116914505 periphilin-1-like 13 15827130 15828209 - 30032202 116914505 MODEL JAAIVD010000008;XM_032918828 XP_032774719 protein-coding 625925762 LOC116914202 small nucleolar RNA SNORA68 12 90383821 90383949 + 116914202 MODEL JAAIVD010000007;XR_004389735 snorna 625925765 LOC116899900 small nucleolar RNA SNORA17 4 4217652 4217750 - 116899900 MODEL JAAIVD010000003 pseudo 625925766 Aga aspartylglucosaminidase ENCODES a protein that exhibits identical protein binding (ortholog); N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity (ortholog); INVOLVED IN protein deglycosylation (ortholog); ASSOCIATED WITH aspartylglucosaminuria (ortholog); autistic disorder (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog); lysosome (ortholog) 13 34444180 34455832 + 30032202 116914604 MODEL JAAIVD010000008;XM_032918968;XM_032918969 XP_032774859;XP_032774860 N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase protein-coding 625925783 LOC116894928 small nucleolar RNA SNORD22 2 9214988 9215113 - 116894928 MODEL JAAIVD010000001;XR_004387127 snorna 625925786 LOC116911817 U1 spliceosomal RNA 10 20823012 20823182 - 116911817 MODEL JAAIVD010000005;XR_004389355 snrna 625925789 Daam1 dishevelled associated activator of morphogenesis 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN presynaptic actin cytoskeleton organization (ortholog); PARTICIPATES IN Wnt signaling, non-canonical pathway; Wnt signaling, the planar cell polarity pathway; ASSOCIATED WITH epilepsy (ortholog); intrinsic cardiomyopathy (ortholog); FOUND IN ciliary basal body (ortholog); glutamatergic synapse (ortholog); motile cilium (ortholog) 7 85496216 85656893 + 22301074;30032202 116905144 MODEL JAAIVD010000026;XM_032907909;XM_032907910;XM_032907911 XP_032763800;XP_032763801;XP_032763802 disheveled-associated activator of morphogenesis 1 protein-coding 625925822 Tmem70 transmembrane protein 70 ENCODES a protein that exhibits mitochondrial proton-transporting ATP synthase complex binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN mitochondrial proton-transporting ATP synthase complex assembly (ortholog); mitochondrial respiratory chain complex I assembly (ortholog); protein complex oligomerization (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); genetic disease (ortholog); hepatocellular adenoma (ortholog); FOUND IN mitochondrial crista (ortholog); mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog) 1 136180253 136191632 + 30032202 116903571 MODEL JAAIVD010000025;XM_032906193 XP_032762084 transmembrane protein 70, mitochondrial protein-coding 625925829 Magoh mago homolog, exon junction complex subunit INVOLVED IN mRNA export from nucleus (ortholog); mRNA metabolic process (ortholog); nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); exon-exon junction complex (ortholog); nucleoplasm (ortholog) 1 46944920 46952349 - 22301074;30032202 116899223 MODEL JAAIVD010000025;XM_032900826 XP_032756717 protein mago nashi homolog protein-coding 625925838 LOC116890107 developmental pluripotency-associated protein 3-like 1 233381183 233382063 - 116890107 MODEL JAAIVD010000025 pseudo 625925839 Cd300a CD300a molecule ENCODES a protein that exhibits phosphatase binding (ortholog); phosphatidylethanolamine binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN intracellular signal transduction (ortholog); negative regulation of B cell proliferation (ortholog); negative regulation of B cell receptor signaling pathway (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) 9 74414028 74427087 - 30032202 116909027 MODEL JAAIVD010000002;XM_032912506 XP_032768397 CMRF35-like molecule 8 protein-coding 625925850 Kcnj11 potassium inwardly rectifying channel subfamily J member 11 ENCODES a protein that exhibits ankyrin binding (ortholog); ATP binding (ortholog); ATP-activated inward rectifier potassium channel activity (ortholog); INVOLVED IN action potential (ortholog); apoptotic process (ortholog); CAMKK-AMPK signaling cascade (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; altered insulin secretion pathway; ASSOCIATED WITH allergic contact dermatitis (ortholog); atopic dermatitis (ortholog); Congenital Hyperinsulinism (ortholog); FOUND IN acrosomal vesicle (ortholog); axolemma (ortholog); cell body fiber (ortholog) 2 153408959 153412626 + 22301074;30032202 116892110 MODEL JAAIVD010000001;XM_032893589 XP_032749480 ATP-sensitive inward rectifier potassium channel 11 protein-coding 625925856 Fam107b family with sequence similarity 107 member B INVOLVED IN sensory perception of sound (ortholog); FOUND IN nucleoplasm (ortholog) 14 10001899 10201225 + 116883425 MODEL JAAIVD010000009;XM_032884556 XP_032740447 protein FAM107B protein-coding 625925864 LOC116901209 uncharacterized LOC116901209 5 6876359 6877425 - 116901209 MODEL JAAIVD010000023;XR_004387965 ncrna 625925868 LOC116894389 carcinoembryonic antigen-related cell adhesion molecule 3-like 2 156996404 157003517 - 30032202 116894389 MODEL JAAIVD010000001;XM_032896096;XR_004387024 XP_032751987 protein-coding 625925880 Gmip GEM interacting protein ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN small GTPase-mediated signal transduction (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 13 12070670 12083845 + 22301074;30032202 116914681 MODEL JAAIVD010000008;XM_032919096 XP_032774987 GEM-interacting protein protein-coding 625925905 LOC116911877 U6 spliceosomal RNA 10 26033380 26033486 + 116911877 MODEL JAAIVD010000005;XR_004389391 snrna 625925908 Bbof1 basal body orientation factor 1 INVOLVED IN cilium movement involved in cell motility (ortholog); flagellated sperm motility (ortholog); negative regulation of microtubule depolymerization (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN axoneme (ortholog); sperm flagellum (ortholog) 7 98519886 98545821 + 116905272 MODEL JAAIVD010000026;XM_032908124 XP_032764015 basal body-orientation factor 1 protein-coding 625925924 LOC116907289 olfactory receptor 7G1-like 8 15118010 15118957 - 22301074;30032202 116907289 MODEL JAAIVD010000027;XM_032910238 XP_032766129 protein-coding 625925927 Hykk hydroxylysine kinase ENCODES a protein that exhibits hydroxylysine kinase activity (ortholog); ASSOCIATED WITH chronic obstructive pulmonary disease (ortholog); Experimental Liver Cirrhosis (ortholog) 8 49004830 49026547 + 30032202 116907240 MODEL JAAIVD010000027;XM_032910201 XP_032766092 protein-coding 625925936 LOC116884666 signal recognition particle 19 kDa protein 15 10022694 10028036 - 22301074;30032202 116884666 MODEL JAAIVD010000010;XM_032885837;XM_032885838 XP_032741728;XP_032741729 protein-coding 625925948 LOC116886758 5S ribosomal RNA 17 43162350 43162468 - 116886758 MODEL JAAIVD010000011;XR_004386159 rrna 625925951 Lsm11 LSM11, U7 small nuclear RNA associated ENCODES a protein that exhibits U7 snRNA binding (ortholog); INVOLVED IN mRNA 3'-end processing by stem-loop binding and cleavage (ortholog); positive regulation of G1/S transition of mitotic cell cycle (ortholog); regulation of chromatin organization (ortholog); ASSOCIATED WITH Aicardi-Goutieres Syndrome 8 (ortholog); FOUND IN histone pre-mRNA 3'end processing complex (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 9 28654875 28671623 - 30032202 116908892 MODEL JAAIVD010000002;XM_032912340;XM_032912341 XP_032768231;XP_032768232 U7 snRNA-associated Sm-like protein LSm11 protein-coding 625925962 LOC116900763 uncharacterized LOC116900763 5 150582972 150594262 + 116900763 MODEL JAAIVD010000023;XR_004387951 ncrna 625925967 LOC116897958 vacuolar protein sorting-associated protein VTA1 homolog 4 44512402 44513325 - 30032202 116897958 MODEL JAAIVD010000003;XM_032899362 XP_032755253 protein-coding 625925971 Dynap dynactin associated protein INVOLVED IN activation of protein kinase B activity (ortholog); cellular response to ergosterol (ortholog); positive regulation of cell population proliferation (ortholog); FOUND IN Golgi apparatus (ortholog); plasma membrane (ortholog) 15 60994236 60997597 + 30032202 116884396 MODEL JAAIVD010000010;XM_032885504 XP_032741395 dynactin-associated protein protein-coding 625925976 Dsel dermatan sulfate epimerase like ENCODES a protein that exhibits chondroitin-glucuronate 5-epimerase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan metabolic process (ortholog); dermatan sulfate proteoglycan metabolic process (ortholog) 10 84769964 84776138 + 22301074;30032202 116911236 MODEL JAAIVD010000005;XM_032915136 XP_032771027 dermatan-sulfate epimerase-like protein protein-coding 625925982 Gfral GDNF family receptor alpha like ENCODES a protein that exhibits glial cell-derived neurotrophic factor receptor activity (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN GDF15-GFRAL signaling pathway (ortholog); negative regulation of appetite (ortholog); negative regulation of extrinsic apoptotic signaling pathway in absence of ligand (ortholog); FOUND IN plasma membrane (ortholog) 8 70424165 70469725 - 30032202 116907765 MODEL JAAIVD010000027;XM_032910904 XP_032766795 GDNF family receptor alpha-like protein-coding 625925996 Olfml2b olfactomedin like 2B ENCODES a protein that exhibits extracellular matrix binding (ortholog); identical protein binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN extracellular matrix (ortholog) 10 49842818 49879992 + 30032202 116911496 MODEL JAAIVD010000005;XM_032915480 XP_032771371 olfactomedin-like protein 2B protein-coding 625926008 LOC116897477 small nucleolar RNA SNORD73 3 67420703 67420774 + 116897477 MODEL JAAIVD010000012;XR_004387502 snorna 625926011 Oxr1 oxidation resistance 1 ENCODES a protein that exhibits oxidoreductase activity (ortholog); INVOLVED IN adult walking behavior (ortholog); cellular response to hydroperoxide (ortholog); negative regulation of cellular response to oxidative stress (ortholog); ASSOCIATED WITH cerebellar hyplasia/atrophy, epilepsy, and global developmental delay (ortholog); cerebellar hypoplasia (ortholog); epilepsy (ortholog); FOUND IN mitochondrion (ortholog); nucleolus (ortholog) 1 216220476 216576858 + 30032202 116911063 MODEL JAAIVD010000025;XM_032914831;XM_032914839;XM_032914849;XM_032914857;XM_032914863;XM_032914873;XM_032914883 XP_032770722;XP_032770730;XP_032770740;XP_032770748;XP_032770754;XP_032770764;XP_032770774 oxidation resistance protein 1 protein-coding 625926044 Dennd4b DENN domain containing 4B ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN regulation of Rab protein signal transduction (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH Dwarfism (ortholog); Familial Prostate Cancer (ortholog); FOUND IN Golgi apparatus (ortholog) 3 63360445 63375956 - 22301074;30032202 116896609 MODEL JAAIVD010000012;XM_032897861;XM_032897862;XM_032897863;XM_032897864 XP_032753752;XP_032753753;XP_032753754;XP_032753755 DENN domain-containing protein 4B protein-coding 625926085 Klf12 KLF transcription factor 12 ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH schizophrenia (ortholog); substance-related disorder (ortholog) 12 24277617 24641015 + 30032202 116913902 MODEL JAAIVD010000007;XM_032918181 XP_032774072 Krueppel-like factor 12;Kruppel like factor 12 protein-coding 625926096 Aadac arylacetamide deacetylase ENCODES a protein that exhibits deacetylase activity (ortholog); serine hydrolase activity (ortholog); triacylglycerol lipase activity (ortholog); INVOLVED IN positive regulation of triglyceride catabolic process (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 3 95057219 95068268 - 30032202 116895479 MODEL JAAIVD010000012;XM_032896737 XP_032752628 protein-coding 625926105 LOC116895673 histone H2B subacrosomal variant-like 3 197577134 197577560 + 22301074;30032202 116895673 MODEL JAAIVD010000012;XM_032896877 XP_032752768 protein-coding 625926109 Ccnc cyclin C ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase regulator activity (ortholog); identical protein binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN G0 to G1 transition (ortholog); negative regulation of Notch signaling pathway (ortholog); negative regulation of triglyceride metabolic process (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH Burns (ortholog); FOUND IN mediator complex (ortholog); ubiquitin ligase complex (ortholog) 1 121594991 121611212 - 30032202;8336937 116902945 MODEL D14013;JAAIVD010000025;XM_032905274;XM_032905281 BAA03114;XP_032761165;XP_032761172 cyclin-C protein-coding 625926128 Mc1r melanocortin 1 receptor ENCODES a protein that exhibits corticotropin receptor activity (ortholog); hormone binding (ortholog); melanocortin receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); intracellular signal transduction (ortholog); melanin biosynthetic process (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphas family; melanocortin system pathway; ASSOCIATED WITH Acute-Phase Reaction (ortholog); age related macular degeneration 7 (ortholog); allergic contact dermatitis (ortholog); FOUND IN membrane (inferred); plasma membrane (inferred) 17 43016520 43017473 + 22301074;30032202 116886253 A0A089ZWZ0;A0A090A136;A0A090BDA6;A0A090BDB2;A0A090BDB8;A0A0U5A7G6;A0A0U5API4;A0A0U5APM2;E9RGE2;E9RGE3;E9RGE4;E9RGE5;E9RGE7;E9RGE9;E9RGF2;E9RGF4 MODEL AB576605;AB576606;AB576607;AB576608;AB576609;AB576610;AB576611;AB576612;AB576613;AB576614;AB576615;AB576616;AB576617;AB576618;AB576619;AB576620;AB576621;AB576622;AB576623;AB576624;AB762745;AB762746;AB762747;AB762748;AB762749;AB762750;AB762751;AB762752;AB762753;AB762754;AB762755;AB762756;AB762757;AB762758;AB762759;AB762760;AB762761;AB762762;AB762763;AB762764;AB762765;AB973117;AB973118;AB973119;AB973120;JAAIVD010000011;XM_032887674 BAJ76692;BAJ76693;BAJ76694;BAJ76695;BAJ76696;BAJ76697;BAJ76698;BAJ76699;BAJ76700;BAJ76701;BAJ76702;BAJ76703;BAJ76704;BAJ76705;BAJ76706;BAJ76707;BAJ76708;BAJ76709;BAJ76710;BAJ76711;BAP47672;BAP47673;BAP47674;BAP47675;BAP47676;BAP47677;BAP47678;BAP47679;BAP47680;BAP47681;BAP47682;BAP47683;BAP47684;BAP47685;BAP47686;BAP47687;BAP47688;BAP47689;BAP47690;BAP47691;BAP47692;BAU20218;BAU20219;BAU20220;BAU20221;XP_032743565 melanocyte-stimulating hormone receptor protein-coding 625926131 Fcer1a Fc fragment of IgE receptor Ia ENCODES a protein that exhibits high-affinity IgE receptor activity (ortholog); IgE binding (ortholog); IgE receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); eosinophil degranulation (ortholog); leukotriene biosynthetic process (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH asthma (ortholog); drug allergy (ortholog); Drug Eruptions (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) 10 52268876 52274929 - 30032202 116911469 MODEL JAAIVD010000005;XM_032915449;XM_032915450 XP_032771340;XP_032771341 high affinity immunoglobulin epsilon receptor subunit alpha protein-coding 625926146 Fgf7 fibroblast growth factor 7 ENCODES a protein that exhibits chemoattractant activity (ortholog); growth factor activity (ortholog); heparin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); branching involved in salivary gland morphogenesis (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); PARTICIPATES IN glypican signaling pathway; ASSOCIATED WITH cervical squamous cell carcinoma (ortholog); cleft lip (ortholog); cleft palate (ortholog); FOUND IN extracellular region (ortholog); GABA-ergic synapse (ortholog); Golgi apparatus (ortholog) 5 104346800 104397769 + 22301074;30032202 116901913 MODEL JAAIVD010000023;XM_032904131 XP_032760022 protein-coding 625926153 LOC116903133 AP-1 complex subunit sigma-3 6 7860924 7861804 - 22301074;30032202 116903133 MODEL JAAIVD010000024;XM_032905489 XP_032761380 protein-coding 625926158 Taf9b TATA-box binding protein associated factor 9b INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of cell growth (ortholog); ASSOCIATED WITH intellectual disability (ortholog); FOUND IN transcription factor TFIID complex (ortholog); transcription factor TFTC complex (ortholog) X 65769494 65778435 - 22301074;30032202 116888793 MODEL JAAIVD010000014;XM_032890073 XP_032745964 transcription initiation factor TFIID subunit 9B protein-coding 625926169 LOC116899708 dephospho-CoA kinase domain-containing protein-like 4 179845461 179846953 + 116899708 MODEL JAAIVD010000003 pseudo 625926170 LOC116904812 U6 spliceosomal RNA 6 114194362 114194468 - 116904812 MODEL JAAIVD010000024;XR_004388463 snrna 625926173 LOC116898497 glyceraldehyde-3-phosphate dehydrogenase-like 4 123116628 123117614 + 116898497 MODEL JAAIVD010000003 pseudo 625926174 LOC116902144 polycomb group protein ASXL1-like 5 132662018 132673729 + 30032202 116902144 MODEL JAAIVD010000023;XM_032904473 XP_032760364 protein-coding 625926182 Apom apolipoprotein M ENCODES a protein that exhibits antioxidant activity (ortholog); lipid carrier activity (ortholog); phospholipid binding (ortholog); INVOLVED IN cholesterol efflux (ortholog); high-density lipoprotein particle assembly (ortholog); high-density lipoprotein particle clearance (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); Experimental Diabetes Mellitus (ortholog); Metabolic Syndrome (ortholog); FOUND IN discoidal high-density lipoprotein particle (ortholog); extracellular region (ortholog); high-density lipoprotein particle (ortholog) 18 7728037 7731549 - 30032202 116887386 MODEL JAAIVD010000013;XM_032888980 XP_032744871 protein-coding 625926192 LOC116910603 olfactory receptor 6C1-like 1 161663961 161680291 + 116910603 MODEL JAAIVD010000025 pseudo 625926193 LOC116883209 PC-esterase domain-containing protein 1A-like 14 42723964 42724806 + 116883209 MODEL JAAIVD010000009 pseudo 625926194 Cops6 COP9 signalosome subunit 6 INVOLVED IN protein deneddylation (ortholog); ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); prostate cancer (ortholog); FOUND IN COP9 signalosome (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 16 15533537 15536366 + 22301074;30032202 116885724 MODEL JAAIVD010000004;XM_032887032 XP_032742923 COP9 signalosome complex subunit 6 protein-coding 625926208 LOC116904762 small nucleolar RNA SNORA17 6 42551548 42551649 + 116904762 MODEL JAAIVD010000024 pseudo 625926209 Ppil2 peptidylprolyl isomerase like 2 ENCODES a protein that exhibits peptidyl-prolyl cis-trans isomerase activity (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-ubiquitin ligase activity (ortholog); INVOLVED IN protein localization to plasma membrane (ortholog); protein polyubiquitination (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 4 2361999 2386139 - 22301074;30032202 116898627 MODEL JAAIVD010000003;XM_032899841 XP_032755732 RING-type E3 ubiquitin-protein ligase PPIL2 protein-coding 625926233 LOC116900848 glyceraldehyde-3-phosphate dehydrogenase-like 5 61526363 61537564 + 116900848 MODEL JAAIVD010000023 pseudo 625926234 LOC116893439 NACHT, LRR and PYD domains-containing protein 4B-like 2 176271204 176310003 + 22301074;30032202 116893439 MODEL JAAIVD010000001;XM_032895206 XP_032751097 protein-coding 625926244 Anp32a acidic nuclear phosphoprotein 32 family member A ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); integrin binding (ortholog); INVOLVED IN negative regulation of plasma membrane bounded cell projection assembly (ortholog); negative regulation of protein modification process (ortholog); nucleocytoplasmic transport (ortholog); PARTICIPATES IN CRM1 export pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); Animal Disease Models (ortholog); Brain Injuries (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 56645637 56682824 + 30032202 116906678 MODEL JAAIVD010000027;XM_032909464;XM_032909465 XP_032765355;XP_032765356 acidic leucine-rich nuclear phosphoprotein 32 family member A protein-coding 625926258 Loxl4 lysyl oxidase like 4 ENCODES a protein that exhibits protein-lysine 6-oxidase activity (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); urinary bladder cancer (ortholog); FOUND IN extracellular region (ortholog); signaling receptor complex (ortholog) 2 41699123 41716119 - 22301074;30032202 116893798 MODEL JAAIVD010000001;XM_032895503 XP_032751394 lysyl oxidase homolog 4 protein-coding 625926277 Creg2 cellular repressor of E1A stimulated genes 2 FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) 4 115863620 115904522 - 116899322 MODEL JAAIVD010000003;XM_032900988 XP_032756879 protein CREG2 protein-coding 625926285 LOC116895063 small nucleolar RNA SNORA17 2 206496227 206496329 + 116895063 MODEL JAAIVD010000001 pseudo 625926286 Scarf2 scavenger receptor class F member 2 ENCODES a protein that exhibits scavenger receptor activity (ortholog); INVOLVED IN heterophilic cell-cell adhesion (ortholog); ASSOCIATED WITH genetic disease (ortholog); microcephaly (ortholog); spermatogenic failure 52 (ortholog) 4 3061534 3073104 + 30032202 116898652 MODEL JAAIVD010000003;XM_032899883 XP_032755774 protein-coding 625926301 Caskin1 CASK interacting protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN regulation of postsynaptic density assembly (ortholog); signal transduction (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); postsynapse (ortholog) 9 1771856 1792497 + 22301074 116910450 MODEL JAAIVD010000002;XM_032914303;XM_032914304;XM_032914305 XP_032770194;XP_032770195;XP_032770196 caskin-1 protein-coding 625926332 LOC116894473 60S ribosomal protein L23a-like 2 168088387 168089604 - 116894473 MODEL JAAIVD010000001 pseudo 625926333 LOC116914353 putative protein FAM90A7P 13 64519272 64527987 - 116914353 MODEL JAAIVD010000008;XM_032918566 XP_032774457 protein-coding 625926340 Hand2 heart and neural crest derivatives expressed 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); E-box binding (ortholog); INVOLVED IN adult heart development (ortholog); apoptotic process involved in heart morphogenesis (ortholog); cardiac neural crest cell development involved in outflow tract morphogenesis (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); atrial fibrillation (ortholog); Cardiomegaly (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog); protein-containing complex (ortholog) 13 31555858 31557818 - 22301074;30032202 116914692 MODEL JAAIVD010000008;XM_032919113 XP_032775004 heart- and neural crest derivatives-expressed protein 2 protein-coding 625926344 Trnal-caa transfer RNA leucine (anticodon CAA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 39930774 39930879 + 116910794 MODEL JAAIVD010000002 trna 625926345 Lzts1 leucine zipper tumor suppressor 1 INVOLVED IN negative regulation of macroautophagy (ortholog); regulation of dendrite morphogenesis (ortholog); regulation of postsynapse assembly (ortholog); ASSOCIATED WITH breast carcinoma (ortholog); esophageal cancer (ortholog); Esophageal Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); cell body (ortholog); dendritic shaft (ortholog) 13 20258014 20312970 + 30032202 116914303 MODEL JAAIVD010000008;XM_032918545 XP_032774436 leucine zipper putative tumor suppressor 1 protein-coding 625926353 LOC116908246 ubiquitin-conjugating enzyme E2 variant 1-like 8 87843360 87855804 - 30032202 116908246 MODEL JAAIVD010000027;XM_032911502 XP_032767393 protein-coding 625926359 Ccn2 cellular communication network factor 2 ENCODES a protein that exhibits fibronectin binding (ortholog); growth factor activity (ortholog); heparin binding (ortholog); INVOLVED IN angiogenesis (ortholog); calcium ion transmembrane import into cytosol (ortholog); cartilage condensation (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Aggressive Fibromatosis (ortholog); aortic valve insufficiency (ortholog); FOUND IN cell cortex (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) 2 210662886 210666014 + 22301074;30032202 116892948 MODEL JAAIVD010000001;XM_032894896 XP_032750787 CCN family member 2 protein-coding 625926368 Cbln3 cerebellin 3 precursor FOUND IN extracellular region (ortholog); parallel fiber to Purkinje cell synapse (ortholog); synapse (ortholog) 12 69137437 69139890 + 22301074 116913738 MODEL JAAIVD010000007;XM_032918043 XP_032773934 cerebellin-3 protein-coding 625926375 LOC116913342 uncharacterized LOC116913342 12 54775365 54777942 + 116913342 MODEL JAAIVD010000007;XR_004389608 ncrna 625926380 Slc7a9 solute carrier family 7 member 9 ENCODES a protein that exhibits amino acid transmembrane transporter activity (ortholog); antiporter activity (ortholog); broad specificity neutral L-amino acid:basic L-amino acid antiporter activity (ortholog); INVOLVED IN amino acid transport (ortholog); L-cystine transport (ortholog); neutral amino acid transport (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH cystinuria (ortholog); genetic disease (ortholog); kidney disease (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); plasma membrane (ortholog) 2 163194518 163215111 - 22301074;30032202 116894437 MODEL JAAIVD010000001;XM_032896140 XP_032752031 B(0,+)-type amino acid transporter 1 protein-coding 625926396 Chst7 carbohydrate sulfotransferase 7 ENCODES a protein that exhibits chondroitin 6-sulfotransferase activity (ortholog); N-acetylglucosamine 6-O-sulfotransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); N-acetylglucosamine metabolic process (ortholog); sulfur compound metabolic process (ortholog); FOUND IN Golgi apparatus (ortholog) X 3783841 3785425 + 22301074;30032202 116888699 MODEL JAAIVD010000014;XM_032889989 XP_032745880 protein-coding 625926401 Rimoc1 RAB7A interacting MON1-CCZ1 complex subunit 1 INVOLVED IN mitophagy (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 3 176152747 176163106 + 22301074;30032202 116897158 MODEL JAAIVD010000012;XM_032898828;XM_032898829 XP_032754719;XP_032754720 C3H5orf51 UPF0600 protein C5orf51 homolog;chromosome 3 C5orf51 homolog protein-coding 625926414 Tomm22 translocase of outer mitochondrial membrane 22 ENCODES a protein that exhibits mitochondrion targeting sequence binding (ortholog); transmembrane protein transporter activity (ortholog); INVOLVED IN obsolete protein targeting to mitochondrion (ortholog); positive regulation of apoptotic process (ortholog); protein import into mitochondrial matrix (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; carrier pathway of mitochondrial protein import; presequence pathway of mitochondrial protein import; FOUND IN membrane (ortholog); mitochondrial outer membrane translocase complex (ortholog); mitochondrion (ortholog) 7 19791632 19792449 - 30032202 116905628 MODEL JAAIVD010000026;XM_032908609 XP_032764500 mitochondrial import receptor subunit TOM22 homolog protein-coding 625926418 LOC116890042 40S ribosomal protein S26-like 1 205594316 205594636 + 22301074;30032202 116890042 MODEL JAAIVD010000025;XM_032890813 XP_032746704 protein-coding 625926421 Pogz pogo transposable element derived with ZNF domain INVOLVED IN double-strand break repair via homologous recombination (ortholog); kinetochore assembly (ortholog); mitotic sister chromatid cohesion (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Developmental Disabilities (ortholog); Dwarfism (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 3 62372823 62417009 - 30032202 116896580 MODEL JAAIVD010000012;XM_032897800;XM_032897802;XM_032897803;XM_032897804;XM_032897805;XM_032897806 XP_032753691;XP_032753693;XP_032753694;XP_032753695;XP_032753696;XP_032753697 pogo transposable element with ZNF domain protein-coding 625926460 LOC116889918 olfactory receptor 6C2-like 1 160645849 160646788 + 116889918 MODEL JAAIVD010000025 pseudo 625926461 Cep295nl CEP295 N-terminal like FOUND IN motile cilium (ortholog) 9 65722608 65725720 + 30032202 116908736 MODEL JAAIVD010000002;XM_032912083 XP_032767974 protein DDC8 homolog protein-coding 625926466 LOC116895576 tropomyosin alpha-3 chain-like 3 137295935 137297297 - 116895576 MODEL JAAIVD010000012 pseudo 625926467 Cdc123 cell division cycle 123 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN eukaryotic translation initiation factor 2 complex assembly (ortholog); FOUND IN cytoplasm (ortholog) 14 12118372 12160887 - 30032202 116883786 MODEL JAAIVD010000009;XM_032885029 XP_032740920 cell division cycle protein 123 homolog protein-coding 625926484 LOC116895342 60S ribosomal protein L9-like 3 44079645 44080220 + 116895342 MODEL JAAIVD010000012 pseudo 625926485 LOC116889913 olfactory receptor 6C1-like 1 160496498 160497448 + 22301074;30032202 116889913 MODEL JAAIVD010000025;XM_032890732 XP_032746623 protein-coding 625926488 Myl6b myosin light chain 6B ASSOCIATED WITH Keloid (ortholog) 1 155957635 155960811 - 22301074;30032202 116906137 MODEL JAAIVD010000025;XM_032909129 XP_032765020 protein-coding 625926498 LOC116905721 cytosolic purine 5'-nucleotidase-like 7 73628088 73629776 + 116905721 MODEL JAAIVD010000026 pseudo 625926499 Gatb glutamyl-tRNA amidotransferase subunit B ENCODES a protein that exhibits glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity (ortholog); INVOLVED IN glutaminyl-tRNAGln biosynthesis via transamidation (ortholog); mitochondrial translation (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 41 (ortholog); Mitochondrial Cardiomyopathy (ortholog); FOUND IN glutamyl-tRNA(Gln) amidotransferase complex (ortholog); mitochondrion (ortholog) 3 67933582 68005972 - 30032202 116896729 MODEL JAAIVD010000012;XM_032898152 XP_032754043 glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial protein-coding 625926516 LOC116892745 ribonuclease H2 subunit B-like 2 180730481 180731383 + 22301074;30032202 116892745 MODEL JAAIVD010000001;XM_032894617 XP_032750508 protein-coding 625926520 LOC116893014 cytochrome b5 reductase 4-like 2 224742259 224744464 - 22301074;30032202 116893014 MODEL JAAIVD010000001;XM_032894977 XP_032750868 protein-coding 625926525 Bmp2 bone morphogenetic protein 2 ENCODES a protein that exhibits BMP receptor binding (ortholog); co-receptor binding (ortholog); cytokine activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); aortic valve development (ortholog); atrioventricular canal morphogenesis (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH atrial heart septal defect 1 (ortholog); bone disease (ortholog); Bone Fractures (ortholog); FOUND IN BMP receptor complex (ortholog); cell surface (ortholog); extracellular region (ortholog) 5 113267883 113277716 + 22301074;30032202 116902011 MODEL JAAIVD010000023;XM_032904278 XP_032760169 protein-coding 625926532 Invs inversin INVOLVED IN animal organ development (ortholog); embryonic heart tube left/right pattern formation (ortholog); epithelial cilium movement involved in determination of left/right asymmetry (ortholog); ASSOCIATED WITH cholestasis (ortholog); cystic kidney disease (ortholog); fundus dystrophy (ortholog); FOUND IN ciliary base (ortholog); ciliary inversin compartment (ortholog); cilium (ortholog) 1 101375435 101514962 + 22301074;30032202 116902070 MODEL JAAIVD010000025;XM_032904362 XP_032760253 protein-coding 625926553 Gcsh glycine cleavage system protein H ENCODES a protein that exhibits aminomethyltransferase activity (ortholog); enzyme binding (ortholog); INVOLVED IN glycine decarboxylation via glycine cleavage system (ortholog); PARTICIPATES IN folate cycle metabolic pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); genetic disease (ortholog); glycine encephalopathy (ortholog); FOUND IN mitochondrion (ortholog) 17 36619382 36640745 - 22301074;30032202 116886408 MODEL JAAIVD010000011;XM_032887882 XP_032743773 glycine cleavage system H protein, mitochondrial protein-coding 625926562 LOC116895703 uncharacterized LOC116895703 3 212185845 212222393 + 116895703 MODEL JAAIVD010000012;XR_004387304 ncrna 625926567 LOC116897561 small nucleolar RNA SNORA17 3 44289864 44289995 - 116897561 MODEL JAAIVD010000012;XR_004387574 snorna 625926570 LOC116900572 olfactory receptor 4K14-like 5 90273262 90274203 - 22301074 116900572 MODEL JAAIVD010000023;XM_032902294 XP_032758185 protein-coding 625926574 Trnaa-agc transfer RNA alanine (anticodon AGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41415064 41415135 + 116884191 MODEL JAAIVD010000009 trna 625926575 Tnni3k TNNI3 interacting kinase ENCODES a protein that exhibits protein kinase activity (ortholog); INVOLVED IN bundle of His cell to Purkinje myocyte communication (ortholog); peptidyl-serine autophosphorylation (ortholog); protein phosphorylation (ortholog); ASSOCIATED WITH Cardiac Conduction Disease with or without Dilated Cardiomyopathy (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 3 6399589 6672192 + 22301074;30032202 116896136 MODEL JAAIVD010000012;XM_032897119;XM_032897120 XP_032753010;XP_032753011 serine/threonine-protein kinase TNNI3K protein-coding 625926609 Eomes eomesodermin ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN astrocyte differentiation (ortholog); blastocyst development (ortholog); brain development (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH anxiety disorder (ortholog); autoimmune disease of the nervous system (ortholog); Colonic Neoplasms (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) 8 109713536 109721059 + 22301074;30032202 116906772 MODEL JAAIVD010000027;XM_032909615;XM_032909616;XM_032909617;XM_032909618 XP_032765506;XP_032765507;XP_032765508;XP_032765509 eomesodermin homolog protein-coding 625926625 LOC116904394 40S ribosomal protein S23-like 6 98370814 98371258 + 116904394 MODEL JAAIVD010000024 pseudo 625926626 LOC116895068 small nucleolar RNA SNORA17 2 59637246 59637327 + 116895068 MODEL JAAIVD010000001 pseudo 625926627 LOC116907780 olfactory receptor 147-like 8 31957697 31958629 + 22301074;30032202 116907780 MODEL JAAIVD010000027;XM_032910922 XP_032766813 protein-coding 625926630 LOC116890493 small nucleolar RNA SNORA48 1 253713587 253713725 - 116890493 MODEL JAAIVD010000025;XR_004386680 snorna 625926633 LOC116899433 aldehyde oxidase 2 4 134024160 134110763 - 22301074;30032202 116899433 MODEL JAAIVD010000003;XM_032901187 XP_032757078 protein-coding 625926672 LOC116900960 40S ribosomal protein S20-like 5 97823217 97824279 + 116900960 MODEL JAAIVD010000023 pseudo 625926673 Adgrl2 adhesion G protein-coupled receptor L2 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN excitatory synapse assembly (ortholog); positive regulation of synapse assembly (ortholog); response to bacterium (ortholog); ASSOCIATED WITH microcephaly (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic membrane (ortholog) 3 11663555 12157177 + 22301074;30032202 116896161 MODEL JAAIVD010000012;XM_032897155;XM_032897156;XM_032897157;XM_032897158;XM_032897159;XM_032897160;XM_032897161;XM_032897162;XM_032897163;XM_032897164;XM_032897165;XM_032897166;XM_032897167;XM_032897168;XM_032897169;XM_032897171;XM_032897172;XM_032897173;XM_032897174;XM_032897175;XM_032897176;XM_032897177;XM_032897178;XM_032897179;XM_032897180;XM_032897181;XM_032897182;XM_032897183;XM_032897184;XM_032897185;XM_032897186;XM_032897187;XM_032897188;XM_032897189;XM_032897190;XM_032897192;XM_032897193 XP_032753046;XP_032753047;XP_032753048;XP_032753049;XP_032753050;XP_032753051;XP_032753052;XP_032753053;XP_032753054;XP_032753055;XP_032753056;XP_032753057;XP_032753058;XP_032753059;XP_032753060;XP_032753062;XP_032753063;XP_032753064;XP_032753065;XP_032753066;XP_032753067;XP_032753068;XP_032753069;XP_032753070;XP_032753071;XP_032753072;XP_032753073;XP_032753074;XP_032753075;XP_032753076;XP_032753077;XP_032753078;XP_032753079;XP_032753080;XP_032753081;XP_032753083;XP_032753084 protein-coding 625926766 LOC116914291 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4-like 13 10382590 10383104 + 116914291 MODEL JAAIVD010000008 pseudo 625926767 Trnat-ugu transfer RNA threonine (anticodon UGU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 12 72249412 72249484 + 116914217 MODEL JAAIVD010000007 trna 625926768 Kcna7 potassium voltage-gated channel subfamily A member 7 ENCODES a protein that exhibits voltage-gated potassium channel activity (ortholog) 2 154098072 154103588 - 22301074;30032202 116894341 MODEL JAAIVD010000001;XM_032896037 XP_032751928 protein-coding 625926774 LOC116902721 60S acidic ribosomal protein P0-like 6 53312814 53313850 + 116902721 MODEL JAAIVD010000024 pseudo 625926775 Dpp4 dipeptidyl peptidase 4 ENCODES a protein that exhibits chemorepellent activity (ortholog); collagen binding (ortholog); dipeptidyl-peptidase activity (ortholog); INVOLVED IN B-1a B cell differentiation (ortholog); behavioral fear response (ortholog); endothelial cell migration (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Coronavirus infectious disease (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); endocytic vesicle (ortholog) 5 39909382 39991415 - 22301074;30032202 116901450 MODEL JAAIVD010000023;XM_032903386 XP_032759277 protein-coding 625926805 LOC116895354 pancreatic alpha-amylase-like 3 46620238 46628734 + 116895354 MODEL JAAIVD010000012 pseudo 625926806 Kctd15 potassium channel tetramerization domain containing 15 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH obesity (ortholog); FOUND IN nucleus (ortholog) 2 164036829 164051758 + 22301074 116892278 MODEL JAAIVD010000001;XM_032893868 XP_032749759 BTB/POZ domain-containing protein KCTD15 protein-coding 625926817 LOC116887148 uncharacterized LOC116887148 18 41849257 41856696 + 116887148 MODEL JAAIVD010000013;XR_004386200 ncrna 625926823 LOC116889815 alpha-enolase-like 22301074;30032202 116889815 MODEL JAAIVD010001046;XM_032890659 XP_032746550 protein-coding 625926824 LOC116895598 60S ribosomal protein L19-like 3 152650222 152650812 - 116895598 MODEL JAAIVD010000012 pseudo 625926825 Nit2 nitrilase family member 2 ENCODES a protein that exhibits omega-amidase activity (ortholog); INVOLVED IN asparagine metabolic process (ortholog); L-methionine salvage (ortholog); oxaloacetate metabolic process (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) 4 41267936 41278651 - 30032202 116898908 MODEL JAAIVD010000003;XM_032900315 XP_032756206 omega-amidase NIT2 protein-coding 625926839 Pfkfb4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 ENCODES a protein that exhibits 6-phosphofructo-2-kinase activity (ortholog); fructose-2,6-bisphosphate 2-phosphatase activity (ortholog); PARTICIPATES IN glycolysis pathway 8 100268043 100305787 + 22301074;30032202 116907632 MODEL JAAIVD010000027;XM_032910693 XP_032766584 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 4 protein-coding 625926857 Cmtm6 CKLF like MARVEL transmembrane domain containing 6 INVOLVED IN camera-type eye development (ortholog); corneal epithelial cell differentiation (ortholog); endocytic recycling (ortholog); FOUND IN early endosome membrane (ortholog); plasma membrane (ortholog); recycling endosome membrane (ortholog) 8 105336957 105355035 + 22301074 116907825 MODEL JAAIVD010000027;XM_032911006 XP_032766897 CKLF-like MARVEL transmembrane domain-containing protein 6 protein-coding 625926865 LOC116907673 olfactory receptor 147-like 8 31599973 31600908 + 22301074;30032202 116907673 MODEL JAAIVD010000027;XM_032910767 XP_032766658 protein-coding 625926869 Rnf113a ring finger protein 113A ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); negative regulation of chemokine-mediated signaling pathway (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH neurodevelopmental disorder with microcephaly, arthrogryposis, and structural brain anomalies (ortholog); nonphotosensitive trichothiodystrophy 5 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); U2-type precatalytic spliceosome (ortholog) X 103359144 103360373 + 22301074;30032202 116889129 MODEL JAAIVD010000014;XM_032890300 XP_032746191 E3 ubiquitin-protein ligase RNF113A protein-coding 625926874 LOC116902851 olfactory receptor 2A1/2A42-like 6 97425960 97426925 - 22301074 116902851 MODEL JAAIVD010000024;XM_032905179 XP_032761070 protein-coding 625926877 LOC116885974 U4 spliceosomal RNA 16 38336850 38336990 - 116885974 MODEL JAAIVD010000004;XR_004386055 snrna 625926880 Pdx1 pancreatic and duodenal homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); cell differentiation (ortholog); cellular response to acadesine (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); cerebral infarction (ortholog); diabetes mellitus (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 16 6576602 6581661 - 22301074;30032202 116885746 MODEL JAAIVD010000004;XM_032887054 XP_032742945 pancreas/duodenum homeobox protein 1 protein-coding 625926886 LOC116912300 vomeronasal type-2 receptor 116-like 11 19215073 19227375 - 22301074;30032202 116912300 MODEL JAAIVD010000006;XM_032916308;XM_032916309;XM_032916311 XP_032772199;XP_032772200;XP_032772202 protein-coding 625926898 LOC116895792 mitochondrial import inner membrane translocase subunit TIM14-like 3 60978136 60978501 + 116895792 MODEL JAAIVD010000012 pseudo 625926899 LOC116894587 vomeronasal type-1 receptor 4-like 2 180424651 180425568 - 22301074;30032202 116894587 MODEL JAAIVD010000001;XM_032896306 XP_032752197 protein-coding 625926902 Lig1 DNA ligase 1 ENCODES a protein that exhibits DNA ligase activity (ortholog); INVOLVED IN base-excision repair (ortholog); DNA repair (ortholog); DNA replication (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH epilepsy with generalized tonic-clonic seizures (ortholog); immunodeficiency 96 (ortholog); inherited metabolic disorder (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 2 173717959 173756315 - 22301074;30032202 116892615 MODEL JAAIVD010000001;XM_032894420 XP_032750311 protein-coding 625926934 P4ha2 prolyl 4-hydroxylase subunit alpha 2 ENCODES a protein that exhibits procollagen-proline 4-dioxygenase activity (ortholog); INVOLVED IN peptidyl-proline hydroxylation to 4-hydroxy-L-proline (ortholog); ASSOCIATED WITH Myopia 25, Autosomal Dominant (ortholog); FOUND IN endoplasmic reticulum (ortholog); procollagen-proline 4-dioxygenase complex (ortholog) 9 36568982 36590304 + 22301074;30032202 116909434 MODEL JAAIVD010000002;XM_032913009;XM_032913010 XP_032768900;XP_032768901 prolyl 4-hydroxylase subunit alpha-2 protein-coding 625926956 LOC116900857 olfactory receptor 1094-like 5 63887096 63888097 + 22301074;30032202 116900857 MODEL JAAIVD010000023;XM_032902545 XP_032758436 protein-coding 625926959 LOC116884583 protocadherin-3 15 1054852 1058758 + 22301074 116884583 MODEL JAAIVD010000010;XM_032885724 XP_032741615 protein-coding 625926964 Plxna3 plexin A3 ENCODES a protein that exhibits semaphorin receptor activity (ortholog); INVOLVED IN axon guidance (ortholog); branchiomotor neuron axon guidance (ortholog); facial nerve structural organization (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Childhood Schizophrenia (ortholog); disorder of sexual development (ortholog) X 128335484 128350770 + 22301074;30032202 116888214 MODEL JAAIVD010000014;XM_032889508 XP_032745399 plexin-A3 protein-coding 625927001 Rarres2 retinoic acid receptor responder 2 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); cellular response to insulin stimulus (ortholog); embryonic digestive tract development (ortholog); ASSOCIATED WITH essential hypertension (ortholog); glucose intolerance (ortholog); granulosa cell tumor (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) 6 92396026 92399187 + 30032202 116903857 MODEL JAAIVD010000024;XM_032906596;XM_032906597;XM_032906598 XP_032762487;XP_032762488;XP_032762489 retinoic acid receptor responder protein 2 protein-coding 625927017 LOC116903926 thymosin beta-10-like 6 100209263 100209576 + 116903926 MODEL JAAIVD010000024 pseudo 625927018 Asnsd1 asparagine synthetase domain containing 1 INVOLVED IN adipose tissue development (ortholog); muscle organ development (ortholog); skeletal muscle organ development (ortholog); ASSOCIATED WITH myopathy (ortholog) 4 121868713 121871858 + 22301074 116899358 MODEL JAAIVD010000003;XM_032901067 XP_032756958 asparagine synthetase domain-containing protein 1 protein-coding 625927025 Klhl9 kelch like family member 9 ENCODES a protein that exhibits cullin family protein binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN protein ubiquitination (ortholog); regulation of cytokinesis (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); midbody (ortholog) 1 65553036 65557288 - 30032202 116900391 MODEL JAAIVD010000025;XM_032902140 XP_032758031 kelch-like protein 9 protein-coding 625927030 LOC116898527 histidine--tRNA ligase, cytoplasmic-like 4 139910565 139911831 - 116898527 MODEL JAAIVD010000003 pseudo 625927031 Gfra1 GDNF family receptor alpha 1 ENCODES a protein that exhibits glial cell-derived neurotrophic factor receptor activity (ortholog); integrin binding (ortholog); neurotrophin receptor activity (ortholog); INVOLVED IN cell migration (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); glial cell-derived neurotrophic factor receptor signaling pathway (ortholog); ASSOCIATED WITH brain ischemia (ortholog); Churg-Strauss syndrome (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN axon (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) 2 57669137 57895565 + 22301074;30032202 116891320 MODEL JAAIVD010000001;XM_032892237;XM_032892238;XM_032892239;XM_032892240;XM_032892241;XM_032892242;XM_032892243 XP_032748128;XP_032748129;XP_032748130;XP_032748131;XP_032748132;XP_032748133;XP_032748134 GDNF family receptor alpha-1 protein-coding 625927059 Ubn2 ubinuclein 2 ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN nucleoplasm (ortholog) 6 101304440 101370870 - 30032202 116903947 MODEL JAAIVD010000024;XM_032906733 XP_032762624 ubinuclein-2 protein-coding 625927081 ND1 NADH dehydrogenase subunit 1 ENCODES a protein that exhibits NADH dehydrogenase (ubiquinone) activity (inferred); NADH dehydrogenase activity (inferred); INVOLVED IN aerobic respiration (inferred); proton transmembrane transport (inferred); respiratory electron transport chain (inferred); FOUND IN membrane (inferred); mitochondrial inner membrane (inferred) MT 2738 3692 + 7751799 B7SE61 REVIEWED EU273707 ABX45233;YP_002791016 protein-coding 625927082 LOC116888897 dystrophin-like X 43834099 43931799 - 22301074;30032202 116888897 MODEL JAAIVD010000014;XM_032890158 XP_032746049 protein-coding 625927094 LOC116913025 U2 spliceosomal RNA 11 22375975 22376140 - 116913025 MODEL JAAIVD010000006 pseudo 625927095 LOC116883942 integrin alpha-8-like 14 13754257 13757038 + 30032202 116883942 MODEL JAAIVD010000009;XM_032885191 XP_032741082 protein-coding 625927100 Hps5 HPS5 biogenesis of lysosomal organelles complex 2 subunit 2 INVOLVED IN blood coagulation (ortholog); pigmentation (ortholog); ASSOCIATED WITH genetic disease (ortholog); hemorrhagic disease (ortholog); Hermansky-Pudlak syndrome (ortholog); FOUND IN BLOC-2 complex (ortholog); cytosol (ortholog) 2 152576033 152615025 + 22301074;30032202 116892097 MODEL JAAIVD010000001;XM_032893574 XP_032749465 Hermansky-Pudlak syndrome 5 protein protein-coding 625927127 Fgfr1 fibroblast growth factor receptor 1 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); fibroblast growth factor binding (ortholog); fibroblast growth factor receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); auditory receptor cell development (ortholog); blood vessel morphogenesis (ortholog); PARTICIPATES IN ceric oxide nanoparticle response pathway; fibroblast growth factor signaling pathway; glypican signaling pathway; ASSOCIATED WITH acoustic neuroma (ortholog); acrocephalosyndactylia (ortholog); acute myeloid leukemia (ortholog); FOUND IN glutamatergic synapse (ortholog); perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog) 13 60918566 60973142 - 22301074;30032202 116914481 MODEL JAAIVD010000008;XM_032918785;XM_032918786;XM_032918787;XM_032918788;XM_032918789;XM_032918790;XM_032918791;XM_032918792 XP_032774676;XP_032774677;XP_032774678;XP_032774679;XP_032774680;XP_032774681;XP_032774682;XP_032774683 protein-coding 625927164 LOC116897248 microtubule-associated protein 1B-like 3 197064840 197073593 + 30032202 116897248 MODEL JAAIVD010000012;XM_032898978 XP_032754869 protein-coding 625927170 Piezo1 piezo type mechanosensitive ion channel component 1 (Er blood group) ENCODES a protein that exhibits identical protein binding (ortholog); mechanosensitive monoatomic cation channel activity (ortholog); mechanosensitive monoatomic ion channel activity (ortholog); INVOLVED IN detection of mechanical stimulus (ortholog); monoatomic cation transport (ortholog); positive regulation of cell-cell adhesion mediated by integrin (ortholog); ASSOCIATED WITH dehydrated hereditary stomatocytosis 1 (ortholog); genetic disease (ortholog); hemolytic anemia (ortholog); FOUND IN cuticular plate (ortholog); endoplasmic reticulum (ortholog); plasma membrane (ortholog) 17 42120710 42182138 - 30032202 116886293 MODEL JAAIVD010000011;XM_032887728 XP_032743619 piezo-type mechanosensitive ion channel component 1 protein-coding 625927225 LOC116896352 toll-like receptor 12 1 29521556 29524534 + 22301074;30032202 116896352 MODEL JAAIVD010000025;XM_032897458 XP_032753349 protein-coding 625927229 LOC116908076 cytochrome P450 1A2 ENCODES a protein that exhibits caffeine oxidase activity (ortholog); demethylase activity (ortholog); enzyme binding (ortholog); INVOLVED IN alkaloid metabolic process (ortholog); cellular respiration (ortholog); cellular response to cadmium ion (ortholog); PARTICIPATES IN axitinib pharmacokinetics pathway; caffeine pharmacokinetics pathway; clomipramine pharmacokinetics pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute lymphoblastic leukemia (ortholog); Atrophy (ortholog) 8 51562873 51569897 - 22301074;30032202 116908076 MODEL JAAIVD010000027;XM_032911352 XP_032767243 protein-coding 625927240 LOC116889937 cytochrome P450 11B1, mitochondrial-like 1 247566740 247569748 - 116889937 MODEL JAAIVD010000025 pseudo 625927241 LOC116913693 olfactory receptor 11H7-like 12 72662921 72663862 - 22301074 116913693 MODEL JAAIVD010000007;XM_032917985 XP_032773876 protein-coding 625927244 Rtca RNA 3'-terminal phosphate cyclase ENCODES a protein that exhibits RNA-3'-phosphate cyclase activity (ortholog); INVOLVED IN negative regulation of optical nerve axon regeneration (ortholog); FOUND IN nucleoplasm (ortholog) 3 43195914 43218227 + 22301074;30032202 116896332 MODEL JAAIVD010000012;XM_032897430 XP_032753321 protein-coding 625927259 LOC116883335 RISC-loading complex subunit TARBP2 1 260559838 260560995 - 116883335 MODEL JAAIVD010000025;XM_032884409 XP_032740300 protein-coding 625927266 LOC116889532 small nucleolar RNA SNORA40 X 14884419 14884499 - 116889532 MODEL JAAIVD010000014 pseudo 625927267 LOC116905780 14-3-3 protein sigma-like 7 8600519 8601513 - 30032202 116905780 MODEL JAAIVD010000026;XM_032908755 XP_032764646 protein-coding 625927272 LOC116907318 glyceraldehyde-3-phosphate dehydrogenase-like 8 28869522 28870240 - 116907318 MODEL JAAIVD010000027 pseudo 625927273 Cacfd1 calcium channel flower domain containing 1 INVOLVED IN endocytosis (ortholog); FOUND IN plasma membrane (ortholog); synapse (ortholog); vesicle (ortholog) 5 9633336 9646721 - 22301074;30032202 116901247 MODEL JAAIVD010000023;XM_032903000;XM_032903001 XP_032758891;XP_032758892 calcium channel flower homolog protein-coding 625927288 Fam135b family with sequence similarity 135 member B 1 244278607 244555932 - 116912340 MODEL JAAIVD010000025;XM_032916392 XP_032772283 protein FAM135B protein-coding 625927313 LOC116900016 PIH1 domain-containing protein 1-like 5 11093492 11094612 - 116900016 MODEL JAAIVD010000023 pseudo 625927314 Nanos2 nanos C2HC-type zinc finger 2 ENCODES a protein that exhibits enzyme activator activity (ortholog); mRNA binding (ortholog); INVOLVED IN germ-line stem cell population maintenance (ortholog); mRNA catabolic process (ortholog); mRNA destabilization (ortholog); ASSOCIATED WITH male infertility (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); P-body (ortholog) 2 171633228 171634661 - 30032202 116894497 MODEL JAAIVD010000001;XM_032896206 XP_032752097 nanos homolog 2 protein-coding 625927319 LOC116898381 eukaryotic translation initiation factor 4E-like 4 71748502 71749194 - 116898381 MODEL JAAIVD010000003 pseudo 625927320 Zbtb45 zinc finger and BTB domain containing 45 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog) 2 174174645 174179149 + 22301074;30032202 116892623 MODEL JAAIVD010000001;XM_032894435 XP_032750326 zinc finger and BTB domain-containing protein 45 protein-coding 625927327 LOC116910445 uncharacterized LOC116910445 9 892469 895161 - 116910445 MODEL JAAIVD010000002;XR_004389152 ncrna 625927331 Uchl3 ubiquitin C-terminal hydrolase L3 ENCODES a protein that exhibits cysteine-type deNEDDylase activity (ortholog); cysteine-type deubiquitinase activity (ortholog); deubiquitinase activity (ortholog); INVOLVED IN adult walking behavior (ortholog); cellular response to insulin stimulus (ortholog); eating behavior (ortholog); ASSOCIATED WITH Deglutition Disorders (ortholog); Neoplasm Metastasis (ortholog); Nerve Degeneration (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 12 22890553 22932681 - 22301074;30032202 116913366 MODEL JAAIVD010000007;XM_032917531 XP_032773422 ubiquitin carboxyl-terminal hydrolase isozyme L3 protein-coding 625927344 LOC116899725 zinc finger protein 431-like 4 182343682 182357120 - 22301074 116899725 MODEL JAAIVD010000003;XM_032901766 XP_032757657 protein-coding 625927351 Eif2b1 eukaryotic translation initiation factor 2B subunit alpha ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN cytoplasmic translational initiation (ortholog); negative regulation of guanyl-nucleotide exchange factor activity (ortholog); oligodendrocyte development (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH Animal Disease Models (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); eukaryotic translation initiation factor 2 complex (ortholog); eukaryotic translation initiation factor 2B complex (ortholog) 16 29294907 29303810 + 30032202 116885394 MODEL JAAIVD010000004;XM_032886674 XP_032742565 translation initiation factor eIF-2B subunit alpha protein-coding 625927364 LOC116900153 cytochrome P450 2J6 1 59148983 59176037 - 22301074;30032202 116900153 MODEL JAAIVD010000025;XM_032901923;XM_032901926 XP_032757814;XP_032757817 protein-coding 625927381 Wdr53 WD repeat domain 53 4 17059915 17068588 + 22301074 116898768 MODEL JAAIVD010000003;XM_032900101;XM_032900102;XM_032900103;XM_032900104;XM_032900105 XP_032755992;XP_032755993;XP_032755994;XP_032755995;XP_032755996 WD repeat-containing protein 53 protein-coding 625927403 LOC116901193 endonuclease G, mitochondrial 5 5448301 5450929 - 22301074;30032202 116901193 MODEL JAAIVD010000023;XM_032902886 XP_032758777 protein-coding 625927410 LOC116889752 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4-like 1 149013705 149014152 + 116889752 MODEL JAAIVD010000025 pseudo 625927411 LOC116887265 olfactory receptor 2B11-like 18 11231209 11244934 - 22301074 116887265 MODEL JAAIVD010000013;XM_032888832 XP_032744723 protein-coding 625927421 LOC116883190 macrophage migration inhibitory factor-like 14 35620648 35620930 + 116883190 MODEL JAAIVD010000009 pseudo 625927422 LOC116910709 small nucleolar RNA SNORA17 9 44385155 44385286 - 116910709 MODEL JAAIVD010000002;XR_004389236 snorna 625927425 LOC116894300 uncharacterized LOC116894300 2 139338142 139347245 - 116894300 MODEL JAAIVD010000001;XR_004387021 ncrna 625927430 LOC116888314 transformer-2 protein homolog beta-like 1 85007787 85008342 + 116888314 MODEL JAAIVD010000025 pseudo 625927431 LOC116892031 uncharacterized LOC116892031 2 139973091 140011848 + 116892031 MODEL JAAIVD010000001;XR_004386901;XR_004386902;XR_004386903 ncrna 625927445 LOC116891963 uncharacterized LOC116891963 2 124767391 124779654 + 116891963 MODEL JAAIVD010000001;XR_004386879;XR_004386880;XR_004386881 ncrna 625927455 LOC116895477 uncharacterized LOC116895477 3 92495900 92509872 - 116895477 MODEL JAAIVD010000012;XR_004387280 ncrna 625927460 LOC116910299 peroxiredoxin-6-like 9 48497888 48499459 - 22301074;30032202 116910299 MODEL JAAIVD010000002;XM_032914168 XP_032770059 protein-coding 625927464 Nova1 uncharacterized LOC116905012 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); mRNA binding (ortholog); RNA binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); negative regulation of cold-induced thermogenesis (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 7 60574357 60699951 - 30032202 116905012 MODEL JAAIVD010000026;XM_032907699;XM_032907700;XM_032907701;XM_032907702;XM_032907703 XP_032763590;XP_032763591;XP_032763592;XP_032763593;XP_032763594 RNA-binding protein Nova-1 protein-coding 625927484 Dnmt3a DNA methyltransferase 3 alpha ENCODES a protein that exhibits chromatin binding (ortholog); DNA (cytosine-5-)-methyltransferase activity (ortholog); DNA binding (ortholog); INVOLVED IN autosome genomic imprinting (ortholog); cellular response to amino acid stimulus (ortholog); cellular response to bisphenol A (ortholog); PARTICIPATES IN DNA modification pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute monocytic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN chromosome, centromeric region (ortholog); cytoplasm (ortholog); euchromatin (ortholog) 7 24482595 24583861 + 30032202 116905636 MODEL JAAIVD010000026;XM_032908615 XP_032764506 DNA (cytosine-5)-methyltransferase 3A protein-coding 625927513 Rps26 ribosomal protein S26 ENCODES a protein that exhibits mRNA binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); negative regulation of RNA splicing (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH anemia (ortholog); Diamond-Blackfan anemia (ortholog); Diamond-Blackfan anemia 10 (ortholog); FOUND IN cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosol (ortholog); cytosolic small ribosomal subunit (ortholog) 1 156100395 156101999 - 22301074;30032202 116906267 MODEL JAAIVD010000025;XM_032909159;XM_032909163 XP_032765050;XP_032765054 40S ribosomal protein S26 protein-coding 625927526 Thoc6 THO complex subunit 6 INVOLVED IN central nervous system development (ortholog); mRNA export from nucleus (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; ASSOCIATED WITH Beaulieu-Boycott-Innes Syndrome (ortholog); genetic disease (ortholog); FOUND IN chromosome, telomeric region (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) 9 975557 980593 - 22301074;30032202 116908955 MODEL JAAIVD010000002;XM_032912414 XP_032768305 THO complex 6;THO complex subunit 6 homolog protein-coding 625927543 LOC116904164 thymosin beta-10-like 6 149108824 149109134 - 22301074;30032202 116904164 MODEL JAAIVD010000024;XM_032907061 XP_032762952 protein-coding 625927548 Slc36a4 solute carrier family 36 member 4 ENCODES a protein that exhibits L-alanine transmembrane transporter activity (ortholog); L-proline transmembrane transporter activity (ortholog); L-tryptophan transmembrane transporter activity (ortholog); INVOLVED IN L-alanine transport (ortholog); proline transport (ortholog); tryptophan transport (ortholog); PARTICIPATES IN nicotinamide adenine dinucleotide metabolic pathway; FOUND IN lysosomal membrane (ortholog) 8 11467487 11495749 + 30032202 116907025 MODEL JAAIVD010000027;XM_032909965 XP_032765856 proton-coupled amino acid transporter 4 protein-coding 625927563 Lrba LPS responsive beige-like anchor protein INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); mitophagy (ortholog); protein localization to phagophore assembly site (ortholog); ASSOCIATED WITH common variable immunodeficiency 8 (ortholog); coronin-1A deficiency (ortholog); genetic disease (ortholog); FOUND IN cytoplasmic vesicle (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) 3 66792138 67335362 - 30032202 116896725 MODEL JAAIVD010000012;XM_032898147 XP_032754038 lipopolysaccharide-responsive and beige-like anchor protein protein-coding 625927624 LOC116902821 taste receptor type 2 member 107 6 16696929 16697855 + 22301074;30032202 116902821 MODEL JAAIVD010000024;XM_032905150 XP_032761041 protein-coding 625927627 Ptpn9 protein tyrosine phosphatase non-receptor type 9 ENCODES a protein that exhibits protein tyrosine phosphatase activity (ortholog); INVOLVED IN negative regulation of neuron projection development (ortholog); peptidyl-tyrosine dephosphorylation (ortholog); positive regulation of protein localization to plasma membrane (ortholog); FOUND IN cytoplasm (ortholog); neuron projection terminus (ortholog) 8 50897174 50977871 + 22301074 116906983 MODEL JAAIVD010000027;XM_032909910;XM_032909911;XM_032909912 XP_032765801;XP_032765802;XP_032765803 tyrosine-protein phosphatase non-receptor type 9 protein-coding 625927650 LOC116909787 uncharacterized LOC116909787 9 83907683 83912972 + 116909787 MODEL JAAIVD010000002;XR_004389096 ncrna 625927655 LOC116892343 zinc finger protein 14 2 165971866 166009904 + 30032202 116892343 MODEL JAAIVD010000001;XM_032893983;XM_032893985;XR_004386942;XR_004386943 XP_032749874;XP_032749876 zinc finger protein 82 protein-coding 625927674 Znf623 zinc finger protein 623 1 248259602 248268047 + 30032202 116912739 MODEL JAAIVD010000025;XM_032916884 XP_032772775 protein-coding 625927680 Cdh19 cadherin 19 10 85656401 85730890 + 22301074;30032202 116911656 MODEL JAAIVD010000005;XM_032915611 XP_032771502 cadherin-19 protein-coding 625927695 LOC116901258 heterogeneous nuclear ribonucleoprotein A1-like 5 10102577 10103920 + 22301074 116901258 MODEL JAAIVD010000023;XM_032903015 XP_032758906 protein-coding 625927700 LOC116900043 olfactory receptor 1361-like 5 14671154 14672140 - 22301074 116900043 MODEL JAAIVD010000023;XM_032901839 XP_032757730 protein-coding 625927703 Pnisr PNN interacting serine and arginine rich protein FOUND IN nuclear speck (ortholog) 1 121466796 121494119 - 30032202 116902899 MODEL JAAIVD010000025;XM_032905229;XM_032905235 XP_032761120;XP_032761126 arginine/serine-rich protein PNISR protein-coding 625927722 LOC116886318 zinc finger protein 280B-like 17 19544935 19546784 + 30032202 116886318 MODEL JAAIVD010000011;XM_032887760 XP_032743651 protein-coding 625927727 Adamts9 ADAM metallopeptidase with thrombospondin type 1 motif 9 ENCODES a protein that exhibits endopeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN camera-type eye morphogenesis (ortholog); cornea development in camera-type eye (ortholog); lens development in camera-type eye (ortholog); ASSOCIATED WITH type 2 diabetes mellitus (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); extracellular matrix (ortholog) 6 54012232 54183924 + 22301074;30032202 116903485 MODEL JAAIVD010000024;XM_032906059 XP_032761950 A disintegrin and metalloproteinase with thrombospondin motifs 9 protein-coding 625927770 Atxn10 ataxin 10 ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN cilium assembly (ortholog); nervous system development (ortholog); neuron projection development (ortholog); ASSOCIATED WITH genetic disease (ortholog); spinocerebellar ataxia 10 (ortholog); Spinocerebellar Ataxias (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) 1 254700521 254822642 + 30032202 116914627 MODEL JAAIVD010000025;XM_032919020 XP_032774911 ataxin-10 protein-coding 625927786 LOC116888820 complement factor H-related protein 4-like X 89562010 89610433 + 116888820 MODEL JAAIVD010000014;XM_032890098 XP_032745989 protein-coding 625927800 LOC116884338 60S ribosomal protein L23a-like 15 31888931 31889464 - 22301074;30032202 116884338 MODEL JAAIVD010000010;XM_032885472 XP_032741363 protein-coding 625927805 Sv2b synaptic vesicle glycoprotein 2B INVOLVED IN regulation of presynaptic cytosolic calcium ion concentration (ortholog); regulation of synaptic vesicle exocytosis (ortholog); ASSOCIATED WITH kidney disease (ortholog); prostate cancer (ortholog); spinal muscular atrophy (ortholog); FOUND IN glutamatergic synapse (ortholog); synaptic vesicle (ortholog); synaptic vesicle membrane (ortholog) 2 125335326 125408225 + 22301074 116891964 MODEL JAAIVD010000001;XM_032893406 XP_032749297 protein-coding 625927821 LOC116894745 60S ribosomal protein L39-like 2 118835871 118836062 - 22301074;30032202 116894745 MODEL JAAIVD010000001;XM_032896421 XP_032752312 protein-coding 625927824 LOC116887055 olfactory receptor 2H2-like 18 10128848 10129786 - 22301074 116887055 MODEL JAAIVD010000013;XM_032888544 XP_032744435 protein-coding 625927827 LOC116906429 small nucleolar RNA SNORA48 7 18354438 18354581 - 116906429 MODEL JAAIVD010000026;XR_004388690 snorna 625927830 Nasp nuclear autoantigenic sperm protein ENCODES a protein that exhibits histone binding (ortholog); histone chaperone activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN blastocyst development (ortholog); DNA replication-dependent chromatin assembly (ortholog); G1/S transition of mitotic cell cycle (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Female Infertility (ortholog); ovarian cancer (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 1 40241508 40267082 - 30032202 116898382 MODEL JAAIVD010000025;XM_032899685;XM_032899687 XP_032755576;XP_032755578 protein-coding 625927852 LOC116895039 small nucleolar RNA SNORA17 2 201574507 201574633 + 116895039 MODEL JAAIVD010000001;XR_004387225 snorna 625927855 Pon1 paraoxonase 1 ENCODES a protein that exhibits acyl-L-homoserine-lactone lactonohydrolase activity (ortholog); aryldialkylphosphatase activity (ortholog); arylesterase activity (ortholog); INVOLVED IN carboxylic acid catabolic process (ortholog); cholesterol metabolic process (ortholog); lactone catabolic process (ortholog); PARTICIPATES IN clopidogrel pharmacodynamics pathway; clopidogrel pharmacokinetics pathway; organophosphate response pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Coronary Syndrome (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN extracellular region (ortholog); high-density lipoprotein particle (ortholog); spherical high-density lipoprotein particle (ortholog) 6 133399244 133424209 + 22301074;30032202 116902979 MODEL JAAIVD010000024;XM_032905298;XM_032905299 XP_032761189;XP_032761190 serum paraoxonase/arylesterase 1 protein-coding 625927872 Rnf217 ring finger protein 217 ASSOCIATED WITH multiple sclerosis (ortholog) 2 205603681 205701348 - 22301074;30032202 116893546 MODEL JAAIVD010000001;XM_032895264 XP_032751155 probable E3 ubiquitin-protein ligase RNF217 protein-coding 625927882 Alk ALK receptor tyrosine kinase ENCODES a protein that exhibits heparin binding (ortholog); identical protein binding (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN adult behavior (ortholog); brain development (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); anaplastic large cell lymphoma (ortholog); Brain Neoplasms (ortholog); FOUND IN plasma membrane (ortholog); protein-containing complex (ortholog) 7 21317511 21352336 + 22301074;30032202 116905950 MODEL JAAIVD010000026;XM_032908950;XM_032908951 XP_032764841;XP_032764842 ALK tyrosine kinase receptor protein-coding 625927903 LOC116910351 CMRF35-like molecule 3 9 69163045 69165929 - 30032202 116910351 MODEL JAAIVD010000002;XM_032914206 XP_032770097 protein-coding 625927907 Ankrd66 ankyrin repeat domain 66 4 86296262 86306337 + 22301074 116898055 MODEL JAAIVD010000003;XM_032899452 XP_032755343 ankyrin repeat domain-containing protein 66 protein-coding 625927914 Rabgap1 RAB GTPase activating protein 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN regulation of cilium assembly (ortholog); FOUND IN cytosol (ortholog) 5 15212037 15328913 + 116901357 MODEL JAAIVD010000023;XM_032903206;XM_032903207;XM_032903209 XP_032759097;XP_032759098;XP_032759100 rab GTPase-activating protein 1 protein-coding 625927950 LOC116886012 small nucleolar RNA SNORA76 16 24224848 24224964 - 116886012 MODEL JAAIVD010000004;XR_004386081 snorna 625927953 LOC116900870 glutathione S-transferase P-like 1 118588340 118612967 - 22301074;30032202 116900870 MODEL JAAIVD010000025;XM_032902571 XP_032758462 protein-coding 625927957 LOC116914352 putative protein FAM90A7P 13 64505959 64514658 - 116914352 MODEL JAAIVD010000008;XM_032918565 XP_032774456 protein-coding 625927964 LOC116907365 olfactory receptor 143-like 8 32064946 32065902 + 22301074;30032202 116907365 MODEL JAAIVD010000027;XM_032910316 XP_032766207 protein-coding 625927968 LOC116908637 40S ribosomal protein S2-like 1 183662089 183662955 + 116908637 MODEL JAAIVD010000025 pseudo 625927969 Wt1 WT1 transcription factor ENCODES a protein that exhibits C2H2 zinc finger domain binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN adrenal cortex formation (ortholog); adrenal gland development (ortholog); apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); Alzheimer's disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) 5 83050897 83092351 + 22301074;30032202 116900521 MODEL JAAIVD010000023;XM_032902250;XM_032902251;XM_032902252 XP_032758141;XP_032758142;XP_032758143 Wilms tumor protein protein-coding 625927987 LOC116900314 olfactory receptor 8H1-like 5 64162834 64163775 - 22301074;30032202 116900314 MODEL JAAIVD010000023;XM_032902071 XP_032757962 protein-coding 625927990 LOC116894173 olfactory receptor 10A4 INVOLVED IN axon guidance (ortholog) 2 105223276 105224223 + 22301074 116894173 MODEL JAAIVD010000001;XM_032895889 XP_032751780 protein-coding 625927993 LOC116894486 CD177 antigen-like 2 170010307 170015395 + 30032202 116894486 MODEL JAAIVD010000001;XM_032896196 XP_032752087 protein-coding 625928002 Cdin1 CDAN1 interacting nuclease 1 INVOLVED IN erythrocyte differentiation (ortholog); ASSOCIATED WITH congenital dyserythropoietic anemia (ortholog); congenital dyserythropoietic anemia type Ib (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 5 93789085 93987869 + 30032202 116901765 MODEL JAAIVD010000023;XM_032903901 XP_032759792 C5H15orf41 chromosome 5 C15orf41 homolog;protein C15orf41 homolog protein-coding 625928017 Hemgn hemogen INVOLVED IN regulation of osteoblast differentiation (ortholog); FOUND IN nucleoplasm (ortholog) 1 99474317 99492857 - 30032202 116888690 MODEL JAAIVD010000025;XM_032889984 XP_032745875 protein-coding 625928026 Tecpr1 tectonin beta-propeller repeat containing 1 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); macroautophagy (ortholog); ASSOCIATED WITH esophageal atresia/tracheoesophageal fistula (ortholog); FOUND IN autophagosome membrane (ortholog); early endosome membrane (ortholog); lysosomal membrane (ortholog) 16 8968091 8996080 + 22301074 116885244 MODEL JAAIVD010000004;XM_032886482 XP_032742373 tectonin beta-propeller repeat-containing protein 1 protein-coding 625928055 LOC116902549 small nucleolar RNA SNORA48 5 135671936 135672074 - 116902549 MODEL JAAIVD010000023;XR_004388150 snorna 625928058 Gpr146 G protein-coupled receptor 146 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); defense response to virus (ortholog); regulation of cholesterol biosynthetic process (ortholog); FOUND IN plasma membrane (ortholog) 16 13806526 13808109 - 22301074 116885248 MODEL JAAIVD010000004;XM_032886487 XP_032742378 probable G-protein coupled receptor 146 protein-coding 625928063 Sec22c SEC22 homolog C, vesicle trafficking protein 8 112842348 112866470 - 30032202 116907974 MODEL JAAIVD010000027;XM_032911205 XP_032767096 vesicle-trafficking protein SEC22c protein-coding 625928074 Hsh2d hematopoietic SH2 domain containing ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN negative regulation of B cell apoptotic process (ortholog); negative regulation of mitochondrial depolarization (ortholog); T cell activation (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) 13 14021388 14033982 + 30032202 116914885 MODEL JAAIVD010000008;XM_032919325 XP_032775216 hematopoietic SH2 domain-containing protein protein-coding 625928084 Tmem151b transmembrane protein 151B ASSOCIATED WITH polycystic ovary syndrome (ortholog) 4 84346333 84351619 + 116899133 MODEL JAAIVD010000003;XM_032900667 XP_032756558 protein-coding 625928091 LOC116898363 transmembrane protein 258-like 4 58628906 58635903 - 22301074;30032202 116898363 MODEL JAAIVD010000003;XM_032899677 XP_032755568 protein-coding 625928095 LOC116914305 igE-binding protein-like 13 34372212 34375834 - 116914305 MODEL JAAIVD010000008 pseudo 625928096 Cacna1b calcium voltage-gated channel subunit alpha1 B ENCODES a protein that exhibits high voltage-gated calcium channel activity (ortholog); protein phosphatase 2A binding (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion import (ortholog); calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH brain edema (ortholog); Diabetic Nephropathies (ortholog); dystonia 23 (ortholog); FOUND IN axon terminus (ortholog); basolateral plasma membrane (ortholog); dendrite (ortholog) 5 12441945 12605701 + 22301074;30032202 116901335 MODEL JAAIVD010000023;XM_032903164;XM_032903165 XP_032759055;XP_032759056 voltage-dependent N-type calcium channel subunit alpha-1B protein-coding 625928148 Cand1 cullin associated and neddylation dissociated 1 ENCODES a protein that exhibits TBP-class protein binding (ortholog); INVOLVED IN cell differentiation (ortholog); negative regulation of catalytic activity (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN neddylation pathway; ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cullin-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 197155348 197196957 - 30032202 116909393 MODEL JAAIVD010000025;XM_032912957 XP_032768848 cullin-associated NEDD8-dissociated protein 1 protein-coding 625928167 LOC116894882 U6 spliceosomal RNA 2 36595001 36595099 + 116894882 MODEL JAAIVD010000001 pseudo 625928168 LOC116887366 olfactory receptor 1361-like 18 10196897 10197826 - 22301074;30032202 116887366 MODEL JAAIVD010000013;XM_032888962 XP_032744853 protein-coding 625928171 Rab17 RAB17, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTPase activity (ortholog); INVOLVED IN anterograde dendritic transport (ortholog); cilium assembly (ortholog); endocytic recycling (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); dendrite (ortholog) 4 162964689 162971699 - 22301074;30032202 116899632 MODEL JAAIVD010000003;XM_032901606 XP_032757497 ras-related protein Rab-17 protein-coding 625928180 LOC116887296 olfactory receptor 2D2-like 1 38341890 38342828 + 22301074 116887296 MODEL JAAIVD010000025;XM_032888880 XP_032744771 protein-coding 625928183 Orc4 origin recognition complex subunit 4 ENCODES a protein that exhibits DNA replication origin binding (ortholog); nucleotide binding (ortholog); INVOLVED IN DNA replication (ortholog); DNA replication initiation (ortholog); polar body extrusion after meiotic divisions (ortholog); ASSOCIATED WITH genetic disease (ortholog); Meier-Gorlin syndrome (ortholog); Meier-Gorlin syndrome 2 (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); nuclear origin of replication recognition complex (ortholog) 5 26761554 26794170 - 22301074;30032202 116901390 MODEL JAAIVD010000023;XM_032903261 XP_032759152 protein-coding 625928201 Rab14 RAB14, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN apical protein localization (ortholog); body fluid secretion (ortholog); early endosome to Golgi transport (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; FOUND IN alveolar lamellar body (ortholog); apical plasma membrane (ortholog); cilium (ortholog) 5 444327 465193 + 22301074;30032202 116901104 MODEL JAAIVD010000023;XM_032902667 XP_032758558 ras-related protein Rab-14 protein-coding 625928213 LOC116908858 keratin, type I cytoskeletal 15 9 54880310 54884137 - 22301074;30032202 116908858 MODEL JAAIVD010000002;XM_032912295;XM_032912297;XM_032912298 XP_032768186;XP_032768188;XP_032768189 protein-coding 625928232 LOC116894246 olfactory receptor 14A2-like 2 114584051 114584992 - 22301074 116894246 MODEL JAAIVD010000001;XM_032895952 XP_032751843 protein-coding 625928235 Bin1 bridging integrator 1 ENCODES a protein that exhibits actin filament binding (ortholog); aspartic-type endopeptidase inhibitor activity (ortholog); GTPase binding (ortholog); INVOLVED IN endosome to lysosome transport (ortholog); lipid tube assembly (ortholog); muscle cell differentiation (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); autosomal dominant nonsyndromic deafness 22 (ortholog); autosomal recessive centronuclear myopathy (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); axon terminus (ortholog) 15 11805337 11862135 - 22301074;30032202 116885000 MODEL JAAIVD010000010;XM_032886227;XM_032886228;XM_032886229;XM_032886230;XM_032886231;XM_032886232;XM_032886233 XP_032742118;XP_032742119;XP_032742120;XP_032742121;XP_032742122;XP_032742123;XP_032742124 myc box-dependent-interacting protein 1 protein-coding 625928270 LOC116883246 NACHT, LRR and PYD domains-containing protein 4E-like 14 66017522 66018259 + 116883246 MODEL JAAIVD010000009 pseudo 625928271 LOC116905509 glyceraldehyde-3-phosphate dehydrogenase-like 1 150541566 150553211 + 116905509 MODEL JAAIVD010000025 pseudo 625928272 Arhgef40 Rho guanine nucleotide exchange factor 40 ASSOCIATED WITH myoepithelioma (ortholog); prostate cancer (ortholog) 12 71898365 71919834 - 22301074 116914089 MODEL JAAIVD010000007;XM_032918402 XP_032774293 protein-coding 625928300 LOC116888230 dual specificity phosphatase 21 X 2299122 2299965 - 22301074 116888230 MODEL JAAIVD010000014;XM_032889517 XP_032745408 protein-coding 625928305 LOC116910415 60S ribosomal protein L17-like 9 42838209 42838880 + 116910415 MODEL JAAIVD010000002 pseudo 625928306 Rabepk Rab9 effector protein with kelch motifs ASSOCIATED WITH High Myopia (ortholog) 5 852564 872725 + 22301074 116901111 MODEL JAAIVD010000023;XM_032902679 XP_032758570 protein-coding 625928319 Opalin oligodendrocytic myelin paranodal and inner loop protein INVOLVED IN regulation of oligodendrocyte differentiation (ortholog); FOUND IN cell-cell contact zone (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) 2 40184874 40203277 - 30032202 116891158 MODEL JAAIVD010000001;XM_032891951 XP_032747842 protein-coding 625928329 LOC116898210 cytochrome b-c1 complex subunit 6, mitochondrial ENCODES a protein that exhibits protein-containing complex binding (ortholog); quinol-cytochrome-c reductase activity (ortholog); ASSOCIATED WITH Mitochondrial Complex III Deficiency Nuclear Type 11 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex III (ortholog) 1 39747161 39755112 - 22301074;30032202 116898210 MODEL JAAIVD010000025;XM_032899573 XP_032755464 protein-coding 625928337 Nsmce1 NSE1 component of SMC5/6 complex ENCODES a protein that exhibits protein dimerization activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN DNA damage response (ortholog); FOUND IN chromosome, centromeric region (ortholog); mitotic spindle pole (ortholog); nucleoplasm (ortholog) 2 76435377 76461410 + 22301074;30032202 116891538 MODEL JAAIVD010000001;XM_032892693;XM_032892694 XP_032748584;XP_032748585 NSE1 homolog, SMC5-SMC6 complex component;non-structural maintenance of chromosomes element 1 homolog protein-coding 625928352 Prickle2 prickle planar cell polarity protein 2 INVOLVED IN blastocyst formation (ortholog); embryonic brain development (ortholog); establishment or maintenance of epithelial cell apical/basal polarity (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder (ortholog); benign epilepsy with centrotemporal spikes (ortholog); epilepsy (ortholog); FOUND IN apicolateral plasma membrane (ortholog); axon (ortholog); axon initial segment (ortholog) 6 54256174 54592306 + 22301074 116903486 MODEL JAAIVD010000024;XM_032906060;XM_032906061;XM_032906062;XM_032906064 XP_032761951;XP_032761952;XP_032761953;XP_032761955 prickle-like protein 2 protein-coding 625928372 LOC116890613 U1 spliceosomal RNA 1 249596566 249596723 - 116890613 MODEL JAAIVD010000025;XR_004386764 snrna 625928375 Mast4 microtubule associated serine/threonine kinase family member 4 ASSOCIATED WITH Sertoli cell-only syndrome (ortholog); West syndrome (ortholog) 3 193960540 194550657 + 22301074;30032202 116897238 MODEL JAAIVD010000012;XM_032898965;XM_032898966;XM_032898967;XM_032898968 XP_032754856;XP_032754857;XP_032754858;XP_032754859 microtubule-associated serine/threonine-protein kinase 4 protein-coding 625928418 Npvf neuropeptide VF precursor ENCODES a protein that exhibits neuropeptide activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN negative regulation of gonadotropin secretion (ortholog); neuropeptide signaling pathway (ortholog); FOUND IN extracellular region (ortholog) 6 90456427 90460083 + 30032202 116902838 MODEL JAAIVD010000024;XM_032905168 XP_032761059 pro-FMRFamide-related neuropeptide VF protein-coding 625928425 Gpr157 G protein-coupled receptor 157 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN circadian behavior (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); radial glial cell differentiation (ortholog); FOUND IN ciliary membrane (ortholog) 1 10656866 10672405 - 22301074;30032202 116886153 MODEL JAAIVD010000025;XM_032887519 XP_032743410 G-protein coupled receptor 157 protein-coding 625928433 LOC116884526 uncharacterized LOC116884526 15 64767935 64770002 - 116884526 MODEL JAAIVD010000010;XR_004385874 ncrna 625928437 LOC116903799 uncharacterized LOC116903799 6 88812747 88816684 - 116903799 MODEL JAAIVD010000024;XM_032906491;XR_004388296 XP_032762382 uncharacterized protein LOC116903799 protein-coding 625928447 Taf5l TATA-box binding protein associated factor 5 like ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); regulation of somatic stem cell population maintenance (ortholog); regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN nuclear speck (ortholog); nucleus (ortholog); SAGA complex (ortholog) 17 43545912 43565777 - 22301074;30032202 116886092 MODEL JAAIVD010000011;XM_032887416;XM_032887417 XP_032743307;XP_032743308 TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L protein-coding 625928458 LOC116912486 maestro heat-like repeat family member 5 1 246518429 246593200 - 30032202 116912486 MODEL JAAIVD010000025;XM_032916560 XP_032772451 protein-coding 625928492 Cipc CLOCK interacting pacemaker INVOLVED IN negative regulation of circadian rhythm (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 7 101035349 101052267 + 22301074;30032202 116905312 MODEL JAAIVD010000026;XM_032908196;XM_032908197;XM_032908198;XM_032908199;XM_032908200;XM_032908201 XP_032764087;XP_032764088;XP_032764089;XP_032764090;XP_032764091;XP_032764092 CLOCK-interacting pacemaker protein-coding 625928515 Ccdc74b coiled-coil domain containing 74B 4 2893054 2897387 + 116898650 MODEL JAAIVD010000003;XM_032899880 XP_032755771 coiled-coil domain-containing protein 74B protein-coding 625928526 LOC116888158 fibrous sheath-interacting protein 2-like X 113530287 113572523 - 116888158 MODEL JAAIVD010000014;XM_032889482 XP_032745373 protein-coding 625928550 LOC116906999 solute carrier family 5 member 4A-like 8 106962116 107006930 - 22301074;30032202 116906999 MODEL JAAIVD010000027;XM_032909928 XP_032765819 protein-coding 625928570 Esrra estrogen related receptor alpha ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cartilage development (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of cellular response to insulin stimulus (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Breast Neoplasms (ortholog); congestive heart failure (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) 2 872782 882909 + 22301074 116894819 MODEL JAAIVD010000001;XM_032896491 XP_032752382 steroid hormone receptor ERR1 protein-coding 625928581 Fndc5 fibronectin type III domain containing 5 INVOLVED IN positive regulation of brown fat cell differentiation (ortholog); response to muscle activity (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); endomyocardial fibrosis (ortholog); hypertension (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog); plasma membrane (ortholog) 1 28996064 29003346 - 22301074;30032202 116896273 MODEL JAAIVD010000025;XM_032897355 XP_032753246 fibronectin type III domain-containing protein 5 protein-coding 625928591 Cdkn1a cyclin dependent kinase inhibitor 1A ENCODES a protein that exhibits cyclin binding (ortholog); cyclin-dependent protein serine/threonine kinase inhibitor activity (ortholog); molecular function activator activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); cellular response to amino acid starvation (ortholog); cellular response to cell-matrix adhesion (ortholog); PARTICIPATES IN G1/S transition pathway; Notch signaling pathway; nuclear factor, erythroid 2 like 2 signaling pathway; ASSOCIATED WITH acoustic neuroma (ortholog); Acute Experimental Pancreatitis (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN cyclin-dependent protein kinase holoenzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 18 4770865 4776889 - 22301074;30032202 116887218 MODEL JAAIVD010000013;XM_032888778 XP_032744669 cyclin-dependent kinase inhibitor 1 protein-coding 625928598 LOC116890293 U2 spliceosomal RNA 1 107019408 107019591 - 116890293 MODEL JAAIVD010000025;XR_004386534 snrna 625928601 LOC116910951 talin rod domain-containing protein 1-like 10 80640536 80654124 - 116910951 MODEL JAAIVD010000005 pseudo 625928602 LOC116904254 NEDD8-conjugating enzyme Ubc12-like 6 29196894 29207801 + 116904254 MODEL JAAIVD010000024 pseudo 625928603 LOC116895444 heterogeneous nuclear ribonucleoprotein A3-like 3 71146446 71147498 + 116895444 MODEL JAAIVD010000012 pseudo 625928604 LOC116887422 rano class II histocompatibility antigen, B-1 beta chain-like 18 8031857 8036914 - 22301074;30032202 116887422 MODEL JAAIVD010000013;XM_032889038 XP_032744929 protein-coding 625928614 Egr4 early growth response 4 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH middle cerebral artery infarction (ortholog) 6 60690005 60692475 + 30032202 116903570 MODEL JAAIVD010000024;XM_032906189 XP_032762080 early growth response protein 4 protein-coding 625928620 C2H6orf118 chromosome 2 C6orf118 homolog 2 187819887 187843727 + 116894627 MODEL JAAIVD010000001;XM_032896345 XP_032752236 uncharacterized protein C6orf118 homolog protein-coding 625928633 LOC116902875 prolactin-inducible protein homolog 6 98578582 98582888 + 22301074;30032202 116902875 MODEL JAAIVD010000024;XM_032905206 XP_032761097 protein-coding 625928641 Pdcd10 programmed cell death 10 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN cellular response to anoxia (ortholog); cellular response to leukemia inhibitory factor (ortholog); establishment of Golgi localization (ortholog); ASSOCIATED WITH arteriovenous malformations of the brain (ortholog); cavernous hemangioma (ortholog); Central Nervous System Neoplasms (ortholog); FOUND IN cell periphery (ortholog); cytoplasm (ortholog); cytosol (ortholog) 3 78338868 78380945 + 30032202 116896777 MODEL JAAIVD010000012;XM_032898237;XM_032898238 XP_032754128;XP_032754129 programmed cell death protein 10 protein-coding 625928658 LOC116888375 high mobility group protein B4-like X 77975280 77976090 + 116888375 MODEL JAAIVD010000014 pseudo 625928659 Steap3 STEAP3 metalloreductase ENCODES a protein that exhibits cupric reductase (NADH) activity (ortholog); FAD binding (ortholog); ferric-chelate reductase (NADPH) activity (ortholog); INVOLVED IN copper ion import (ortholog); exosomal secretion (ortholog); iron import into cell (ortholog); PARTICIPATES IN iron uptake pathway; ASSOCIATED WITH COVID-19 (ortholog); Hypochromic Microcytic Anemia with Iron Overload (ortholog); Hypochromic Microcytic Anemia with Iron Overload 2 (ortholog); FOUND IN cytoplasm (ortholog); endosome (ortholog); endosome membrane (ortholog) 10 12804380 12844083 - 30032202 116911371 MODEL JAAIVD010000005;XM_032915300;XM_032915301;XM_032915302;XM_032915303 XP_032771191;XP_032771192;XP_032771193;XP_032771194 metalloreductase STEAP3 protein-coding 625928675 LOC116893286 Y-box-binding protein 1-like 2 148116621 148117560 + 116893286 MODEL JAAIVD010000001 pseudo 625928676 Ccdc33 coiled-coil domain containing 33 FOUND IN peroxisome (ortholog) 8 51897208 51996479 - 30032202 116907776 MODEL JAAIVD010000027;XM_032910919 XP_032766810 coiled-coil domain-containing protein 33 protein-coding 625928699 LOC116886466 metallothionein-4 17 1047676 1049752 + 22301074;30032202 116886466 MODEL JAAIVD010000011;XM_032887968 XP_032743859 protein-coding 625928706 Emc8 ER membrane protein complex subunit 8 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); FOUND IN cytoplasm (ortholog); EMC complex (ortholog); endoplasmic reticulum (ortholog) 17 40301345 40311130 - 22301074;30032202 116886099 MODEL JAAIVD010000011;XM_032887428 XP_032743319 protein-coding 625928715 LOC116901520 serine/arginine-rich splicing factor 3-like 5 50660513 50662931 - 116901520 MODEL JAAIVD010000023 pseudo 625928716 Pam peptidylglycine alpha-amidating monooxygenase ENCODES a protein that exhibits calcium ion binding (ortholog); chromatin binding (ortholog); copper ion binding (ortholog); INVOLVED IN fatty acid primary amide biosynthetic process (ortholog); heart development (ortholog); limb development (ortholog); PARTICIPATES IN melanocortin system pathway; ASSOCIATED WITH anxiety disorder (ortholog); Brain Hypoxia (ortholog); Experimental Arthritis (ortholog); FOUND IN cell surface (ortholog); chromatin (ortholog); condensed chromosome (ortholog) 4 168442963 168702758 + 22301074;30032202 116899682 MODEL JAAIVD010000003;XM_032901702 XP_032757593 peptidyl-glycine alpha-amidating monooxygenase protein-coding 625928747 LOC116888363 uncharacterized LOC116888363 X 33359481 33363076 - 116888363 MODEL JAAIVD010000014;XR_004386305 ncrna 625928751 Arg2 arginase 2 ENCODES a protein that exhibits arginase activity (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cellular response to interleukin-4 (ortholog); cellular response to lipopolysaccharide (ortholog); PARTICIPATES IN urea cycle pathway; ASSOCIATED WITH acute kidney failure (ortholog); asthma (ortholog); congestive heart failure (ortholog); FOUND IN mitochondrion (ortholog) 7 93238244 93263293 + 22301074;30032202 116905205 MODEL JAAIVD010000026;XM_032908018 XP_032763909 arginase-2, mitochondrial protein-coding 625928763 Ltk leukocyte receptor tyrosine kinase ENCODES a protein that exhibits protein kinase activity (ortholog); protein tyrosine kinase activity (ortholog); receptor signaling protein tyrosine kinase activator activity (ortholog); INVOLVED IN cell population proliferation (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cellular response to retinoic acid (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) 5 97919114 97927685 - 22301074;30032202 116901820 MODEL JAAIVD010000023;XM_032903978 XP_032759869 leukocyte tyrosine kinase receptor protein-coding 625928787 Spag6 sperm associated antigen 6 FOUND IN axoneme (ortholog); microtubule cytoskeleton (ortholog); sperm end piece (ortholog) 14 5287303 5327854 - 30032202 116883920 MODEL JAAIVD010000009;XM_032885178 XP_032741069 sperm-associated antigen 6 protein-coding 625928800 LOC116906998 stromelysin-1 8 3694511 3707067 + 22301074;30032202 116906998 MODEL JAAIVD010000027;XM_032909927 XP_032765818 protein-coding 625928813 Abca1 ATP binding cassette subfamily A member 1 ENCODES a protein that exhibits apolipoprotein A-I binding (ortholog); apolipoprotein A-I receptor activity (ortholog); apolipoprotein binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cellular response to cholesterol (ortholog); cellular response to cytokine stimulus (ortholog); PARTICIPATES IN altered reverse cholesterol transport pathway; retinol metabolic pathway; reverse cholesterol transport pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); alcohol use disorder (ortholog); Alzheimer's disease (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cell surface (ortholog) 1 96823311 96948806 - 22301074;30032202 116901779 MODEL JAAIVD010000025;XM_032903924;XM_032903933;XM_032903941 XP_032759815;XP_032759824;XP_032759832 phospholipid-transporting ATPase ABCA1 protein-coding 625928872 Prep prolyl endopeptidase ENCODES a protein that exhibits endopeptidase activity (ortholog); metallocarboxypeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN angiotensin maturation (ortholog); protein catabolic process (ortholog); ASSOCIATED WITH amnestic disorder (ortholog); depressive disorder (ortholog); Disease Progression (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) 18 44838582 44933683 + 22301074;30032202 116887087 MODEL JAAIVD010000013;XM_032888595 XP_032744486 protein-coding 625928891 LOC116909048 uncharacterized LOC116909048 9 64729729 64731015 - 116909048 MODEL JAAIVD010000002;XR_004389046 ncrna 625928895 Ptbp3 polypyrimidine tract binding protein 3 INVOLVED IN negative regulation of mRNA splicing, via spliceosome (ortholog); negative regulation of RNA splicing (ortholog); regulation of cell differentiation (ortholog) 1 91886503 91967503 + 22301074;30032202 116901503 MODEL JAAIVD010000025;XM_032903477;XM_032903484;XM_032903491;XM_032903499 XP_032759368;XP_032759375;XP_032759382;XP_032759390 polypyrimidine tract-binding protein 3 protein-coding 625928921 LOC116892019 uncharacterized LOC116892019 2 137720771 137723381 + 116892019 MODEL JAAIVD010000001;XR_004386889 ncrna 625928926 Cep70 centrosomal protein 70 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN acrosome assembly (ortholog); apoptotic process (ortholog); microtubule cytoskeleton organization (ortholog); ASSOCIATED WITH orofacial cleft (ortholog); FOUND IN centrosome (ortholog) 8 90602566 90645917 + 30032202 116907151 MODEL JAAIVD010000027;XM_032910114;XM_032910115 XP_032766005;XP_032766006 centrosomal protein of 70 kDa protein-coding 625928949 Lyplal1 lysophospholipase like 1 ENCODES a protein that exhibits hydrolase activity, acting on ester bonds (ortholog); lipase activity (ortholog); palmitoyl-(protein) hydrolase activity (ortholog); INVOLVED IN negative regulation of cGAS/STING signaling pathway (ortholog); negative regulation of Golgi to plasma membrane protein transport (ortholog); protein depalmitoylation (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) 10 64224507 64256182 - 30032202 116911563 MODEL JAAIVD010000005;XM_032915553 XP_032771444 lysophospholipase-like protein 1 protein-coding 625928958 Trnas-aga transfer RNA serine (anticodon AGA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42524369 42524450 - 116884192 MODEL JAAIVD010000009 trna 625928959 C18H10orf105 chromosome 18 C10orf105 homolog ASSOCIATED WITH autosomal recessive nonsyndromic deafness 12 (ortholog); Usher syndrome (ortholog) 18 26218987 26222578 + 116886926 MODEL JAAIVD010000013;XM_032888407 XP_032744298 uncharacterized protein C10orf105 homolog protein-coding 625928965 Sgo2 shugoshin 2 INVOLVED IN female meiotic nuclear division (ortholog); intracellular protein localization (ortholog); male meiotic nuclear division (ortholog); FOUND IN chromosome, centromeric region (ortholog); condensed chromosome, centromeric region (ortholog); kinetochore (ortholog) 4 134370799 134395226 - 30032202 116899435 MODEL JAAIVD010000003;XM_032901189 XP_032757080 protein-coding 625928978 LOC116909203 transcription factor BTF3 homolog 4-like 9 87778631 87779119 + 116909203 MODEL JAAIVD010000002 pseudo 625928979 Znf783 zinc finger protein 783 ENCODES a protein that exhibits identical protein binding (ortholog) 6 92938887 92944476 - 22301074 116904387 MODEL JAAIVD010000024;XM_032907254 XP_032763145 protein ZNF783;zinc finger family member 783 protein-coding 625928987 LOC116902528 small nucleolar RNA SNORA70 5 134987764 134987882 - 116902528 MODEL JAAIVD010000023 pseudo 625928988 Atf6 activating transcription factor 6 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); enzyme binding (ortholog); INVOLVED IN eye development (ortholog); positive regulation of apoptotic process (ortholog); positive regulation of ATF6-mediated unfolded protein response (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; ASSOCIATED WITH achromatopsia (ortholog); achromatopsia 7 (ortholog); asbestosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); fibrillar center (ortholog) 10 49905781 50060215 - 30032202 116910844 MODEL JAAIVD010000005;XM_032914594 XP_032770485 cyclic AMP-dependent transcription factor ATF-6 alpha protein-coding 625929008 LOC116913250 60S ribosomal protein L12-like 12 80488486 80489046 + 116913250 MODEL JAAIVD010000007 pseudo 625929009 LOC116889692 chaperone protein DnaJ-like 22301074;30032202 116889692 MODEL JAAIVD010000052;XM_032890579 XP_032746470 protein-coding 625929010 LOC116909388 E3 ubiquitin-protein transferase MAEA 1 197083859 197085139 + 22301074;30032202 116909388 MODEL JAAIVD010000025;XM_032912946 XP_032768837 protein-coding 625929015 LOC116902284 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 7-like 5 145543090 145549777 + 22301074;30032202 116902284 MODEL JAAIVD010000023;XM_032904715 XP_032760606 protein-coding 625929022 Dsp desmoplakin ENCODES a protein that exhibits protein kinase C binding (ortholog); scaffold protein binding (ortholog); INVOLVED IN adherens junction organization (ortholog); bundle of His cell-Purkinje myocyte adhesion involved in cell communication (ortholog); cell-cell adhesion (ortholog); ASSOCIATED WITH amyloidosis (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); arrhythmogenic right ventricular dysplasia 1 (ortholog); FOUND IN adherens junction (ortholog); axon (ortholog); basolateral plasma membrane (ortholog) 14 57196761 57244459 + 22301074;30032202 116883396 MODEL JAAIVD010000009;XM_032884523;XM_032884524 XP_032740414;XP_032740415 protein-coding 625929054 Oscar osteoclast associated Ig-like receptor ENCODES a protein that exhibits collagen receptor activity (ortholog); INVOLVED IN Fc-gamma receptor signaling pathway (ortholog); multinuclear osteoclast differentiation (ortholog); osteoclast differentiation (ortholog); ASSOCIATED WITH Alveolar Bone Loss (ortholog); FOUND IN cell surface (ortholog) 2 178193101 178198433 - 30032202 116893452 MODEL JAAIVD010000001;XM_032895217 XP_032751108 osteoclast-associated immunoglobulin-like receptor protein-coding 625929062 Cnksr3 CNKSR family member 3 INVOLVED IN negative regulation of ERK1 and ERK2 cascade (ortholog); negative regulation of peptidyl-serine phosphorylation (ortholog); positive regulation of sodium ion transmembrane transporter activity (ortholog); FOUND IN cytosol (ortholog) 2 195784600 195875824 + 22301074 116892869 MODEL JAAIVD010000001;XM_032894769 XP_032750660 connector enhancer of kinase suppressor of ras 3 protein-coding 625929079 Akip1 A-kinase interacting protein 1 INVOLVED IN substrate adhesion-dependent cell spreading (ortholog); ASSOCIATED WITH COVID-19 (ortholog); diastolic heart failure (ortholog); FOUND IN nucleoplasm (ortholog) 2 91756204 91764089 - 30032202 116891674 MODEL JAAIVD010000001;XM_032892929;XM_032892930;XM_032892931 XP_032748820;XP_032748821;XP_032748822 A-kinase-interacting protein 1 protein-coding 625929095 Nudt15 nudix hydrolase 15 ENCODES a protein that exhibits 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity (ortholog); 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity (ortholog); 8-oxo-dGDP phosphatase activity (ortholog); INVOLVED IN dGTP catabolic process (ortholog); DNA protection (ortholog); mitotic cell cycle (ortholog); ASSOCIATED WITH leukopenia (ortholog); neutropenia (ortholog); pancytopenia (ortholog); FOUND IN nucleoplasm (ortholog) 12 50853008 50856869 + 30032202 116913604 MODEL JAAIVD010000007;XM_032917854 XP_032773745 nucleotide triphosphate diphosphatase NUDT15 protein-coding 625929102 Znf853 zinc finger protein 853 16 9850739 9857077 + 30032202 116885141 MODEL JAAIVD010000004;XM_032886325;XM_032886326;XM_032886327;XM_032886329 XP_032742216;XP_032742217;XP_032742218;XP_032742220 protein-coding 625929120 LOC116894257 olfactory receptor 13G1 2 115398316 115399239 - 22301074 116894257 MODEL JAAIVD010000001;XM_032895962 XP_032751853 protein-coding 625929123 LOC116897576 small nucleolar RNA SNORA17 3 82880926 82881051 + 116897576 MODEL JAAIVD010000012;XR_004387585 snorna 625929126 Trnaa-agc transfer RNA alanine (anticodon AGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 1 10005158 10005229 - 116890640 MODEL JAAIVD010000025 trna 625929127 LOC116897572 small nucleolar RNA SNORA17 3 7936681 7936813 - 116897572 MODEL JAAIVD010000012;XR_004387582 snorna 625929130 LOC116896770 heat shock protein HSP 90-beta-like 3 74767213 74769521 - 22301074;30032202 116896770 MODEL JAAIVD010000012;XM_032898228 XP_032754119 protein-coding 625929134 LOC116888767 olfactory receptor 13F1-like 1 102217414 102218372 - 22301074 116888767 MODEL JAAIVD010000025;XM_032890059 XP_032745950 protein-coding 625929137 Nlrx1 NLR family member X1 INVOLVED IN negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of inflammatory response (ortholog); negative regulation of innate immune response (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); FOUND IN mitochondrion (ortholog) 8 38809671 38823286 - 22301074;30032202 116907440 MODEL JAAIVD010000027;XM_032910411 XP_032766302 protein-coding 625929150 LOC116906972 vomeronasal type-2 receptor 116-like 8 34459264 34486372 - 116906972 MODEL JAAIVD010000027 pseudo 625929151 LOC116896106 loricrin-like 3 576466 578630 - 22301074 116896106 MODEL JAAIVD010000012;XM_032897073 XP_032752964 protein-coding 625929156 Jsrp1 junctional sarcoplasmic reticulum protein 1 INVOLVED IN skeletal muscle contraction (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog) 1 154072371 154077095 + 30032202 116904863 MODEL JAAIVD010000025;XM_032907458;XM_032907466 XP_032763349;XP_032763357 protein-coding 625929171 LOC116907384 olfactory receptor 145-like 8 31738330 31739274 + 22301074;30032202 116907384 MODEL JAAIVD010000027;XM_032910337 XP_032766228 protein-coding 625929174 Ggn gametogenetin ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN double-strand break repair (ortholog); embryo implantation (ortholog); gamete generation (ortholog); ASSOCIATED WITH spermatogenic failure 69 (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); perinuclear region of cytoplasm (ortholog) 2 166820528 166824285 - 22301074;30032202 116892361 MODEL JAAIVD010000001;XM_032894015;XM_032894017 XP_032749906;XP_032749908 protein-coding 625929184 LOC116908095 pleckstrin homology domain-containing family F member 2-like 8 15331457 15332253 - 116908095 MODEL JAAIVD010000027 pseudo 625929185 LOC116884365 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-like 15 41036278 41037896 + 22301074;30032202 116884365 MODEL JAAIVD010000010;XM_032885490 XP_032741381 protein-coding 625929189 LOC116902783 multifunctional protein ADE2-like 6 76610405 76611667 + 116902783 MODEL JAAIVD010000024 pseudo 625929190 Lasp1 LIM and SH3 protein 1 ENCODES a protein that exhibits actin filament binding (ortholog); monoatomic ion transmembrane transporter activity (ortholog); INVOLVED IN monoatomic ion transport (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Endometrial Neoplasms (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cortical actin cytoskeleton (ortholog); cytoplasm (ortholog); focal adhesion (ortholog) 9 56542863 56583020 - 30032202 116909510 MODEL JAAIVD010000002;XM_032913114 XP_032769005 LIM and SH3 domain protein 1 protein-coding 625929201 LOC116906274 40S ribosomal protein S21-like 7 127931054 127979585 + 116906274 MODEL JAAIVD010000026 pseudo 625929202 LOC116883580 histone H3 14 42746614 42747077 + 22301074;30032202 116883580 MODEL JAAIVD010000009;XM_032884760 XP_032740651 protein-coding 625929207 LOC116901051 60S ribosomal protein L38-like 5 134150109 134151041 - 116901051 MODEL JAAIVD010000023 pseudo 625929208 LOC116907110 olfactory receptor 7G2-like 8 14895222 14896187 + 22301074;30032202 116907110 MODEL JAAIVD010000027;XM_032910079 XP_032765970 protein-coding 625929211 LOC116884840 hsc70-interacting protein-like 15 64546465 64547557 - 116884840 MODEL JAAIVD010000010 pseudo 625929212 LOC116892369 uncharacterized LOC116892369 2 167113164 167115795 + 116892369 MODEL JAAIVD010000001;XR_004386948 ncrna 625929217 LOC116906144 ATP synthase subunit d, mitochondrial-like 7 93962051 93962572 - 116906144 MODEL JAAIVD010000026 pseudo 625929218 Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN DNA damage response (ortholog); double-strand break repair via classical nonhomologous end joining (ortholog); positive regulation of DNA repair (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness 1A (ortholog); Cockayne syndrome (ortholog); Cockayne syndrome A (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog); nuclear matrix (ortholog) 3 190253141 190292249 + 22301074;30032202 116897211 MODEL JAAIVD010000012;XM_032898920;XM_032898921 XP_032754811;XP_032754812 DNA excision repair protein ERCC-8 protein-coding 625929237 Vps37c VPS37C subunit of ESCRT-I ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); FOUND IN ESCRT I complex (ortholog); nucleoplasm (ortholog) 2 10167608 10196267 + 30032202 116890968 MODEL JAAIVD010000001;XM_032891630;XM_032891631;XM_032891632;XM_032891633 XP_032747521;XP_032747522;XP_032747523;XP_032747524 vacuolar protein sorting-associated protein 37C protein-coding 625929254 Acy3 aminoacylase 3 ENCODES a protein that exhibits aminoacylase activity (ortholog); identical protein binding (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); membrane (ortholog) 2 3647352 3650572 - 22301074;30032202 116890798 MODEL JAAIVD010000001;XM_032891276;XM_032891277 XP_032747167;XP_032747168 N-acyl-aromatic-L-amino acid amidohydrolase (carboxylate-forming) protein-coding 625929268 Cstb cystatin B ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (ortholog); endopeptidase inhibitor activity (ortholog); protease binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); amyloid fibril formation (ortholog); negative regulation of proteolysis (ortholog); ASSOCIATED WITH benign epilepsy with centrotemporal spikes (ortholog); Dyskinesias (ortholog); dystonia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) 18 1711640 1713738 + 22301074;30032202 116887352 MODEL JAAIVD010000013;XM_032888946 XP_032744837 cystatin-B protein-coding 625929275 LOC116910944 cellular tumor antigen p53-like 10 76160013 76161733 + 116910944 MODEL JAAIVD010000005 pseudo 625929276 Btbd10 BTB domain containing 10 INVOLVED IN positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) 2 88156587 88214108 + 22301074;30032202 116891642 MODEL JAAIVD010000001;XM_032892862;XM_032892863;XM_032892864;XM_032892865;XM_032892866;XM_032892867;XM_032892868;XM_032892869;XM_032892870 XP_032748753;XP_032748754;XP_032748755;XP_032748756;XP_032748757;XP_032748758;XP_032748759;XP_032748760;XP_032748761 BTB/POZ domain-containing protein 10 protein-coding 625929310 Tymp thymidine phosphorylase ENCODES a protein that exhibits protein homodimerization activity (ortholog); thymidine phosphorylase activity (ortholog); INVOLVED IN dTMP catabolic process (ortholog); pyrimidine nucleoside metabolic process (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; capecitabine pharmacodynamics pathway; capecitabine pharmacokinetics pathway; ASSOCIATED WITH 2-aminoadipic 2-oxoadipic aciduria (ortholog); Breast Neoplasms (ortholog); carcinoma (ortholog) 1 258672522 258675666 - 22301074;30032202 116915106 MODEL JAAIVD010000025;XM_032919539 XP_032775430 protein-coding 625929323 Afp alpha fetoprotein INVOLVED IN animal organ regeneration (ortholog); apoptotic process (ortholog); cellular response to retinoic acid (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH Alpha-Fetoprotein Deficiency (ortholog); Alpha-Fetoprotein, Hereditary Persistence of (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog) 11 3934395 3952251 + 22301074;30032202 116912243 MODEL JAAIVD010000006;XM_032916222 XP_032772113 alpha-fetoprotein protein-coding 625929342 LOC116915180 small nucleolar RNA SNORA71 13 2300310 2300440 + 116915180 MODEL JAAIVD010000008;XR_004389839 snorna 625929345 Irag2 inositol 1,4,5-triphosphate receptor associated 2 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN nucleus organization (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); nuclear envelope (ortholog) 6 2895110 2935124 + 30032202 116903668 MODEL JAAIVD010000024;XM_032906328 XP_032762219 lymphoid-restricted membrane protein protein-coding 625929368 LOC116897762 major urinary protein-like 4 58839 62268 - 30032202 116897762 MODEL JAAIVD010000003;XM_032899189;XM_032899191;XM_032899192;XM_032899193;XM_032899194 XP_032755080;XP_032755082;XP_032755083;XP_032755084;XP_032755085 protein-coding 625929403 LOC116910868 josephin-1-like 10 75430638 75431228 - 116910868 MODEL JAAIVD010000005 pseudo 625929404 LOC116888383 40S ribosomal protein S24-like X 2731667 2732246 + 116888383 MODEL JAAIVD010000014 pseudo 625929405 Tmem200c transmembrane protein 200C 4 178453958 178459916 + 116899703 MODEL JAAIVD010000003;XM_032901728 XP_032757619 protein-coding 625929411 LOC116911753 uncharacterized LOC116911753 10 90731500 90744115 + 116911753 MODEL JAAIVD010000005;XR_004389337 ncrna 625929416 LOC116902654 U4 spliceosomal RNA 5 90106941 90107115 + 116902654 MODEL JAAIVD010000023 pseudo 625929417 LOC116913233 adenosylhomocysteinase-like 12 72284593 72285899 + 116913233 MODEL JAAIVD010000007 pseudo 625929418 Slc16a10 solute carrier family 16 member 10 ENCODES a protein that exhibits aromatic amino acid transmembrane transporter activity (ortholog); L-phenylalanine transmembrane transporter activity (ortholog); L-tryptophan transmembrane transporter activity (ortholog); INVOLVED IN aromatic amino acid transport (ortholog); thyroid hormone generation (ortholog); thyroid hormone transport (ortholog); ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell junction (ortholog); plasma membrane (ortholog) 18 39834325 39940245 - 22301074;30032202 116887516 MODEL JAAIVD010000013;XM_032889139 XP_032745030 monocarboxylate transporter 10 protein-coding 625929428 Kcnk1 potassium two pore domain channel subfamily K member 1 ENCODES a protein that exhibits identical protein binding (ortholog); inward rectifier potassium channel activity (ortholog); ligand-gated channel activity (ortholog); INVOLVED IN cellular response to acidic pH (ortholog); chloride transmembrane transport (ortholog); glutamate secretion (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH Chronic Periodontitis (ortholog); Deafness (ortholog); Hyperplasia (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); endosome (ortholog) 17 45508744 45546415 + 22301074;30032202 116886212 MODEL JAAIVD010000011;XM_032887602 XP_032743493 potassium channel subfamily K member 1 protein-coding 625929435 LOC116889506 small nucleolar RNA SNORA17 X 66626523 66626658 - 116889506 MODEL JAAIVD010000014;XR_004386452 snorna 625929438 LOC116905381 serine protease inhibitor A3K 7 115397102 115406016 - 30032202 116905381 MODEL JAAIVD010000026;XM_032908319 XP_032764210 protein-coding 625929447 Slc35f5 solute carrier family 35 member F5 ENCODES a protein that exhibits choline transmembrane transporter activity (ortholog); INVOLVED IN choline transport (ortholog) 10 9435352 9465528 + 22301074;30032202 116911076 MODEL JAAIVD010000005;XM_032914855;XM_032914856;XM_032914858 XP_032770746;XP_032770747;XP_032770749 protein-coding 625929471 LOC116912952 small nucleolar RNA SNORA70 11 5875405 5875541 + 116912952 MODEL JAAIVD010000006;XR_004389519 snorna 625929474 Slc44a3 solute carrier family 44 member 3 3 38326096 38403116 + 22301074;30032202 116896309 MODEL JAAIVD010000012;XM_032897396;XM_032897397 XP_032753287;XP_032753288 choline transporter-like protein 3 protein-coding 625929497 LOC116890548 small nucleolar RNA SNORA17 1 116923670 116923801 + 116890548 MODEL JAAIVD010000025;XR_004386724 snorna 625929500 LOC116890385 U6 spliceosomal RNA 1 265699537 265699636 + 116890385 MODEL JAAIVD010000025 pseudo 625929501 Ramac RNA guanine-7 methyltransferase activating subunit ENCODES a protein that exhibits enzyme activator activity (ortholog); molecular function activator activity (ortholog); RNA binding (ortholog); INVOLVED IN 7-methylguanosine mRNA capping (ortholog); PARTICIPATES IN 5'-end pre-mRNA capping pathway; FOUND IN mRNA cap methyltransferase RNMT:RAMAC complex (ortholog); mRNA capping enzyme complex (ortholog); nucleoplasm (ortholog) 2 118503874 118510675 - 22301074;30032202 116891899 MODEL JAAIVD010000001;XM_032893315 XP_032749206 RNA guanine-N7 methyltransferase activating subunit protein-coding 625929508 Fancb FA complementation group B INVOLVED IN bone marrow development (ortholog); cellular response to camptothecin (ortholog); cellular response to xenobiotic stimulus (ortholog); ASSOCIATED WITH breast cancer (ortholog); Fanconi anemia (ortholog); Fanconi anemia complementation group A (ortholog); FOUND IN chromatin (ortholog); Fanconi anaemia nuclear complex (ortholog) X 25524540 25541340 + 30032202 116889029 MODEL JAAIVD010000014;XM_032890229 XP_032746120 Fanconi anemia group B protein protein-coding 625929521 Krt24 keratin 24 9 55161581 55166497 + 22301074;30032202 116909145 MODEL JAAIVD010000002;XM_032912630 XP_032768521 keratin, type I cytoskeletal 24 protein-coding 625929531 LOC116885422 vomeronasal type-1 receptor 4-like 1 214751173 214752055 - 116885422 MODEL JAAIVD010000025 pseudo 625929532 LOC116898599 zinc finger protein 431-like 4 182340318 182342701 - 30032202 116898599 MODEL JAAIVD010000003;XM_032899793 XP_032755684 protein-coding 625929539 Sntb2 syntrophin beta 2 PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; FOUND IN cytoplasm (ortholog); plasma membrane (ortholog); protein-containing complex (ortholog) 17 26656041 26736625 + 22301074;30032202 116886312 MODEL JAAIVD010000011;XM_032887754 XP_032743645 beta-2-syntrophin protein-coding 625929550 C3 complement C3 ENCODES a protein that exhibits antigen binding (ortholog); C5L2 anaphylatoxin chemotactic receptor binding (ortholog); chemokine activity (ortholog); INVOLVED IN amyloid-beta clearance (ortholog); B cell activation (ortholog); complement activation (ortholog); PARTICIPATES IN classical complement pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); acute myocardial infarction (ortholog); FOUND IN cell surface (ortholog); classical-complement-pathway C3/C5 convertase complex (ortholog); cytoplasmic side of Golgi membrane (ortholog) 4 88610382 88636268 - 22301074;30032202 116899215 MODEL JAAIVD010000003;XM_032900809 XP_032756700 protein-coding 625929595 LOC116905594 phosphate carrier protein, mitochondrial-like 7 7482461 7487146 + 116905594 MODEL JAAIVD010000026 pseudo 625929596 LOC116911335 uncharacterized LOC116911335 10 68174689 68190861 + 116911335 MODEL JAAIVD010000005 pseudo 625929597 Tasl TLR adaptor interacting with endolysosomal SLC15A4 INVOLVED IN positive regulation of innate immune response (ortholog); positive regulation of toll-like receptor 7 signaling pathway (ortholog); positive regulation of toll-like receptor 8 signaling pathway (ortholog); FOUND IN cytosol (ortholog); endolysosome membrane (ortholog); lysosomal membrane (ortholog) X 44264609 44283925 + 22301074;30032202 116888997 MODEL JAAIVD010000014;XM_032890212 XP_032746103 CXHXorf21 chromosome X CXorf21 homolog;protein CXorf21 homolog protein-coding 625929603 Fam3b FAM3 metabolism regulating signaling molecule B INVOLVED IN insulin secretion (ortholog) 4 47063050 47094883 + 30032202 116898939 MODEL JAAIVD010000003;XM_032900355 XP_032756246 protein FAM3B protein-coding 625929615 Kbtbd2 kelch repeat and BTB domain containing 2 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN gene expression (ortholog); glucose metabolic process (ortholog); lipid metabolic process (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 6 84289013 84311464 + 22301074 116903744 MODEL JAAIVD010000024;XM_032906428;XM_032906429;XM_032906430;XM_032906431;XM_032906432;XM_032906434 XP_032762319;XP_032762320;XP_032762321;XP_032762322;XP_032762323;XP_032762325 kelch repeat and BTB domain-containing protein 2 protein-coding 625929635 Ncoa5 nuclear receptor coactivator 5 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN glucose homeostasis (ortholog); negative regulation of insulin receptor signaling pathway (ortholog); FOUND IN actin cytoskeleton (ortholog); nucleoplasm (ortholog) 5 152926965 152959722 + 30032202 116902338 MODEL JAAIVD010000023;XM_032904815 XP_032760706 protein-coding 625929647 Vps53 VPS53 subunit of GARP complex INVOLVED IN endocytic recycling (ortholog); lysosomal transport (ortholog); protein targeting to lysosome (ortholog); ASSOCIATED WITH genetic disease (ortholog); microcephaly (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN EARP complex (ortholog); GARP complex (ortholog); Golgi apparatus (ortholog) 9 94770190 94892496 - 30032202 116910222 MODEL JAAIVD010000002;XM_032914111 XP_032770002 vacuolar protein sorting-associated protein 53 homolog protein-coding 625929673 Tmem59l transmembrane protein 59 like INVOLVED IN branching involved in ureteric bud morphogenesis (ortholog); ASSOCIATED WITH ovarian cyst (ortholog) 13 12738209 12741955 - 116914742 MODEL JAAIVD010000008;XM_032919180;XM_032919181 XP_032775071;XP_032775072 transmembrane protein 59-like protein-coding 625929690 Myo1e myosin IE ENCODES a protein that exhibits actin filament binding (ortholog); ATP hydrolysis activity (ortholog); calmodulin binding (ortholog); INVOLVED IN endocytosis (ortholog); glomerular basement membrane development (ortholog); glomerular filtration (ortholog); ASSOCIATED WITH benign familial hematuria (ortholog); COVID-19 (ortholog); focal segmental glomerulosclerosis (ortholog); FOUND IN adherens junction (ortholog); brush border (ortholog); clathrin-coated endocytic vesicle (ortholog) 8 64571875 64760376 + 22301074;30032202 116906541 MODEL JAAIVD010000027;XM_032909239 XP_032765130 unconventional myosin-Ie protein-coding 625929722 Ift81 intraflagellar transport 81 ENCODES a protein that exhibits tubulin binding (ortholog); INVOLVED IN cilium assembly (ortholog); intraciliary transport involved in cilium assembly (ortholog); regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); ciliopathy (ortholog); Dwarfism (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 16 31208683 31305556 + 30032202 116885493 MODEL JAAIVD010000004;XM_032886783 XP_032742674 intraflagellar transport protein 81 homolog protein-coding 625929745 LOC116900845 60S ribosomal protein L18-like 5 58787992 58788556 - 116900845 MODEL JAAIVD010000023 pseudo 625929746 Tnnt3 troponin T3, fast skeletal type ENCODES a protein that exhibits actin binding (ortholog); calcium-dependent protein binding (ortholog); tropomyosin binding (ortholog); INVOLVED IN positive regulation of calcium-dependent ATPase activity (ortholog); regulation of ATP-dependent activity (ortholog); regulation of striated muscle contraction (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); congenital myopathy (ortholog); distal arthrogryposis (ortholog); FOUND IN troponin complex (ortholog) 2 6960463 6977458 - 22301074;30032202 116890845 MODEL JAAIVD010000001;XM_032891374;XM_032891375;XM_032891376;XM_032891377;XM_032891378;XM_032891379;XM_032891380;XM_032891381;XM_032891382;XM_032891384;XM_032891385;XM_032891386;XM_032891387 XP_032747265;XP_032747266;XP_032747267;XP_032747268;XP_032747269;XP_032747270;XP_032747271;XP_032747272;XP_032747273;XP_032747275;XP_032747276;XP_032747277;XP_032747278 troponin T, fast skeletal muscle protein-coding 625929782 Ndufb8 NADH:ubiquinone oxidoreductase subunit B8 ASSOCIATED WITH acute kidney failure (ortholog); Alzheimer's disease (ortholog); Arsenic Poisoning (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) 2 44053488 44058573 - 22301074;30032202 116891212 MODEL JAAIVD010000001;XM_032892047 XP_032747938 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial protein-coding 625929791 LOC116892575 pregnancy-specific glycoprotein 22-like 2 171946197 171965125 - 30032202 116892575 MODEL JAAIVD010000001;XM_032894355 XP_032750246 protein-coding 625929800 Pgrmc1 progesterone receptor membrane component 1 ENCODES a protein that exhibits heme binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN associative learning (ortholog); axon guidance (ortholog); heme biosynthetic process (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); cataract (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cell body (ortholog); mitochondrial outer membrane (ortholog); neuron projection (ortholog) X 102754337 102762335 + 30032202 116888627 MODEL JAAIVD010000014;XM_032889924 XP_032745815 membrane-associated progesterone receptor component 1 protein-coding 625929807 Lrrc3c leucine rich repeat containing 3C ASSOCIATED WITH allergic asthma (ortholog) 9 55787390 55788157 - 22301074;30032202 116909150 MODEL JAAIVD010000002;XM_032912636 XP_032768527 leucine-rich repeat-containing protein 3C protein-coding 625929810 LOC116914314 prothymosin alpha-like 13 41039800 41040236 + 30032202 116914314 MODEL JAAIVD010000008;XM_032918550 XP_032774441 protein-coding 625929814 Cask calcium/calmodulin dependent serine protein kinase ENCODES a protein that exhibits neurexin family protein binding (ortholog); PDZ domain binding (ortholog); protein kinase C binding (ortholog); INVOLVED IN calcium ion import (ortholog); cerebral cortex development (ortholog); negative regulation of cell-matrix adhesion (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Acholinesterasemia (ortholog); Animal Mammary Neoplasms (ortholog); Brain Injuries (ortholog); FOUND IN apical dendrite (ortholog); basement membrane (ortholog); basolateral plasma membrane (ortholog) X 20506929 20897039 - 22301074;30032202 116889408 MODEL JAAIVD010000014;XM_032890511 XP_032746402 peripheral plasma membrane protein CASK protein-coding 625929845 LOC116889632 histone demethylase UTY-like Y 1964325 1986738 + 30032202 116889632 MODEL JAAIVD010000015;XM_032890545 XP_032746436 protein-coding 625929855 LOC116900881 olfactory receptor 5D13-like 5 69787332 69790223 - 22301074;30032202 116900881 MODEL JAAIVD010000023;XM_032902559 XP_032758450 protein-coding 625929859 Nudt4 nudix hydrolase 4 ENCODES a protein that exhibits 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity (ortholog); diphosphoinositol-polyphosphate diphosphatase activity (ortholog); snoRNA binding (ortholog); FOUND IN cytosol (ortholog) 1 174769754 174785946 - 30032202 116908497 MODEL JAAIVD010000025;XM_032911658;XM_032911669 XP_032767549;XP_032767560 diphosphoinositol polyphosphate phosphohydrolase 2 protein-coding 625929872 Prkcd protein kinase C delta ENCODES a protein that exhibits calcium,diacylglycerol-dependent serine/threonine kinase activity (ortholog); diacylglycerol-dependent, calcium-independent serine/threonine kinase activity (ortholog); enzyme activator activity (ortholog); INVOLVED IN apoptotic process (ortholog); B cell proliferation (ortholog); cell chemotaxis (ortholog); PARTICIPATES IN ceramide signaling pathway; eicosanoid signaling pathway; endothelin signaling pathway; ASSOCIATED WITH autoimmune lymphoproliferative syndrome type 3 (ortholog); brain ischemia (ortholog); Burns (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) 13 6285154 6314774 - 22301074 116914467 MODEL JAAIVD010000008;XM_032918768 XP_032774659 protein kinase C delta type protein-coding 625929894 LOC116906472 small nucleolar RNA SNORA17 7 91906053 91906176 - 116906472 MODEL JAAIVD010000026 pseudo 625929895 LOC116904446 phospholipid scramblase 2-like 6 124905439 124949805 + 116904446 MODEL JAAIVD010000024 pseudo 625929896 Glra1 glycine receptor alpha 1 ENCODES a protein that exhibits extracellularly glycine-gated chloride channel activity (ortholog); extracellularly glycine-gated ion channel activity (ortholog); glycine binding (ortholog); INVOLVED IN acrosome reaction (ortholog); action potential (ortholog); adult walking behavior (ortholog); PARTICIPATES IN Inhibitory synaptic transmission pathway; ASSOCIATED WITH dystonia (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN calyx of Held (ortholog); endoplasmic reticulum (ortholog); external side of plasma membrane (ortholog) 9 37928541 38019496 - 22301074;30032202 116909007 MODEL JAAIVD010000002;XM_032912478;XM_032912479;XM_032912480 XP_032768369;XP_032768370;XP_032768371 glycine receptor subunit alpha-1 protein-coding 625929918 Tpt1 tumor protein, translationally-controlled 1 ENCODES a protein that exhibits calcium ion binding (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN negative regulation of ectoderm development (ortholog); negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); response to virus (ortholog); ASSOCIATED WITH Kidney Neoplasms (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic microtubule (ortholog); cytosol (ortholog) 12 48567468 48570436 - 30032202 116913439 MODEL JAAIVD010000007;XM_032917639 XP_032773530 translationally-controlled tumor protein protein-coding 625929928 Irgc immunity related GTPase cinema INVOLVED IN positive regulation of flagellated sperm motility (ortholog); FOUND IN lipid droplet (ortholog); sperm flagellum (ortholog); sperm mitochondrial sheath (ortholog) 2 170281785 170285487 + 22301074;30032202 116894491 MODEL JAAIVD010000001;XM_032896200 XP_032752091 interferon-inducible GTPase 5 protein-coding 625929934 Fkbp5 FKBP prolyl isomerase 5 ENCODES a protein that exhibits heat shock protein binding (ortholog); peptidyl-prolyl cis-trans isomerase activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); protein folding (ortholog); response to alcohol (ortholog); PARTICIPATES IN aldosterone signaling pathway; cortisol signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol withdrawal syndrome (ortholog); asthma (ortholog) 18 5418543 5460703 + 22301074 116887064 MODEL JAAIVD010000013;XM_032888564 XP_032744455 peptidyl-prolyl cis-trans isomerase FKBP5 protein-coding 625929948 LOC116908019 40S ribosomal protein S11-like 8 95810327 95810813 - 116908019 MODEL JAAIVD010000027 pseudo 625929949 LOC116889414 cyclin-D-binding Myb-like transcription factor 1 X 80819447 80820784 - 30032202 116889414 MODEL JAAIVD010000014;XM_032890516 XP_032746407 protein-coding 625929952 LOC116890062 glyceraldehyde-3-phosphate dehydrogenase-like 1 213327322 213328323 - 116890062 MODEL JAAIVD010000025 pseudo 625929953 LOC116897817 RNA transcription, translation and transport factor protein-like 4 10427901 10556645 + 116897817 MODEL JAAIVD010000003 pseudo 625929954 LOC116894932 small nucleolar RNA SNORD115 2 140314110 140314194 - 116894932 MODEL JAAIVD010000001;XR_004387131 snorna 625929957 LOC116896525 uncharacterized LOC116896525 3 61178293 61179604 + 116896525 MODEL JAAIVD010000012;XR_004387342 ncrna 625929961 Pheta2 PH domain containing endocytic trafficking adaptor 2 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN endosome organization (ortholog); receptor recycling (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN clathrin-coated vesicle (ortholog); early endosome (ortholog); recycling endosome (ortholog) 1 252069448 252074040 + 30032202 116890158 MODEL JAAIVD010000025;XM_032890893 XP_032746784 sesquipedalian-2 protein-coding 625929967 Tcf25 TCF25 ribosome quality control complex subunit INVOLVED IN regulation of protein K48-linked ubiquitination (ortholog); rescue of stalled cytosolic ribosome (ortholog); FOUND IN nucleus (ortholog); RQC complex (ortholog) 17 42981722 43013219 + 22301074;30032202 116886078 MODEL JAAIVD010000011;XM_032887393;XM_032887394;XM_032887395;XM_032887396;XM_032887397;XM_032887398 XP_032743284;XP_032743285;XP_032743286;XP_032743287;XP_032743288;XP_032743289 transcription factor 25 protein-coding 625929998 LOC116886231 acylcarnitine hydrolase-like 17 24795905 24803531 + 30032202 116886231 MODEL JAAIVD010000011;XM_032887637 XP_032743528 protein-coding 625930014 LOC116890059 ferritin light chain 1-like 1 210645705 210646271 + 116890059 MODEL JAAIVD010000025 pseudo 625930015 LOC116885388 cytochrome P450 3A18 16 7650119 7693177 + 22301074;30032202 116885388 MODEL JAAIVD010000004;XM_032886668 XP_032742559 protein-coding 625930030 Mn1 MN1 proto-oncogene, transcriptional regulator INVOLVED IN intramembranous ossification (ortholog); negative regulation of osteoblast proliferation (ortholog); positive regulation of vitamin D receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial heart septal defect (ortholog); CEBALID Syndrome (ortholog); FOUND IN nucleus (ortholog) 16 42521426 42560063 - 30032202 116885403 MODEL JAAIVD010000004;XM_032886686 XP_032742577 transcriptional activator MN1 protein-coding 625930036 Ddx31 DEAD-box helicase 31 INVOLVED IN ribosome biogenesis (ortholog); FOUND IN nucleolus (ortholog) 5 7767216 7831883 - 22301074;30032202 116901224 MODEL JAAIVD010000023;XM_032902952 XP_032758843 probable ATP-dependent RNA helicase DDX31 protein-coding 625930060 LOC116887610 H-2 class I histocompatibility antigen, alpha chain-like 18 9532371 9537907 + 116887610 MODEL JAAIVD010000013 pseudo 625930061 LOC116887846 MLV-related proviral Env polyprotein-like X 41246477 41248409 - 116887846 MODEL JAAIVD010000014 pseudo 625930062 LOC116892790 vomeronasal type-2 receptor 116-like 2 186114844 186139140 + 22301074;30032202 116892790 MODEL JAAIVD010000001;XM_032894663 XP_032750554 protein-coding 625930071 LOC116893979 fMet-Leu-Phe receptor ENCODES a protein that exhibits complement receptor activity (inferred); G protein-coupled receptor activity (inferred); N-formyl peptide receptor activity (inferred); INVOLVED IN chemotaxis (inferred); complement receptor mediated signaling pathway (inferred); G protein-coupled receptor signaling pathway (inferred); FOUND IN membrane (inferred); plasma membrane (inferred) 2 100720464 100721665 + 28652375;30032202 116893979 A0A220QSC5 MODEL JAAIVD010000001;MF175622;XM_032895697 ASK09532;XP_032751588 Fpr1 protein-coding 625930075 Myd88 MYD88 innate immune signal transduction adaptor ENCODES a protein that exhibits ATP-dependent histone chaperone activity (ortholog); identical protein binding (ortholog); interleukin-1 receptor binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); apoptotic process (ortholog); cell surface receptor signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); anemia (ortholog); anogenital venereal wart (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 110570698 110575741 - 22301074;30032202 116907910 MODEL JAAIVD010000027;XM_032911109 XP_032767000 myeloid differentiation primary response protein MyD88 protein-coding 625930086 Elavl2 ELAV like RNA binding protein 2 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); regulation of synapse assembly (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); lung small cell carcinoma (ortholog); FOUND IN cerebellar granule cell to Purkinje cell synapse (ortholog); synapse (ortholog) 1 62004477 62129252 + 22301074 116900236 MODEL JAAIVD010000025;XM_032901990;XM_032901998;XM_032902006;XM_032902012;XM_032902020;XM_032902027;XM_032902034;XM_032902041;XM_032902049;XM_032902056;XM_032902063;XM_032902070 XP_032757881;XP_032757889;XP_032757897;XP_032757903;XP_032757911;XP_032757918;XP_032757925;XP_032757932;XP_032757940;XP_032757947;XP_032757954;XP_032757961 ELAV-like protein 2 protein-coding 625930127 LOC116901628 A-kinase anchor protein 2 1 93685169 93729496 - 116901628 MODEL JAAIVD010000025;XM_032903708;XM_032903717;XM_032903725 XP_032759599;XP_032759608;XP_032759616 protein-coding 625930139 LOC116888076 proteasome subunit beta type-7-like 1 228413139 228413952 + 116888076 MODEL JAAIVD010000025 pseudo 625930140 LOC116902183 ER degradation-enhancing alpha-mannosidase-like protein 2 5 135048725 135076035 - 22301074;30032202 116902183 MODEL JAAIVD010000023;XM_032904546 XP_032760437 protein-coding 625930155 LOC116889442 U6 spliceosomal RNA X 100606758 100606862 + 116889442 MODEL JAAIVD010000014;XR_004386404 snrna 625930158 Psmd8 proteasome 26S subunit, non-ATPase 8 INVOLVED IN regulation of AMPA receptor activity (ortholog); ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog); synaptic vesicle (ortholog) 2 166813461 166820211 + 30032202 116892360 MODEL JAAIVD010000001;XM_032894014 XP_032749905 26S proteasome non-ATPase regulatory subunit 8 protein-coding 625930169 Gls2 glutaminase 2 INVOLVED IN reactive oxygen species metabolic process (ortholog); regulation of apoptotic process (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; argininosuccinic aciduria pathway; carbamoyl phosphate synthetase I deficiency pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN mitochondrion (ortholog) 1 155665285 155682703 + 22301074;30032202 116905897 MODEL JAAIVD010000025;XM_032908890;XM_032908897;XM_032908900;XM_032908907 XP_032764781;XP_032764788;XP_032764791;XP_032764798 glutaminase liver isoform, mitochondrial protein-coding 625930202 LOC116887882 uncharacterized LOC116887882 X 49308711 49311489 - 116887882 MODEL JAAIVD010000014 pseudo 625930203 Ttll2 tubulin tyrosine ligase like 2 2 186626651 186628429 + 30032202 116894620 MODEL JAAIVD010000001;XM_032896334 XP_032752225 probable tubulin polyglutamylase TTLL2 protein-coding 625930207 Cdc42ep4 CDC42 effector protein 4 INVOLVED IN cellular response to type II interferon (ortholog); positive regulation of pseudopodium assembly (ortholog); regulation of cell shape (ortholog); FOUND IN actin cytoskeleton (ortholog); adherens junction (ortholog); cytoplasm (ortholog) 9 75554318 75578874 + 116909333 MODEL JAAIVD010000002;XM_032912873;XM_032912874;XM_032912875 XP_032768764;XP_032768765;XP_032768766 protein-coding 625930220 LOC116899905 small nucleolar RNA SNORD66 4 5505814 5505888 + 116899905 MODEL JAAIVD010000003;XR_004387877 snorna 625930223 Ism1 isthmin 1 INVOLVED IN negative regulation of angiogenesis (ortholog) 5 119004487 119082467 + 30032202 116902026 MODEL JAAIVD010000023;XM_032904301;XM_032904302 XP_032760192;XP_032760193 isthmin-1 protein-coding 625930236 LOC116907926 atherin-like 8 111128630 111133268 - 116907926 MODEL JAAIVD010000027;XM_032911138 XP_032767029 protein-coding 625930242 Tmem132c transmembrane protein 132C ASSOCIATED WITH megacolon (ortholog) 16 26372880 26480067 - 116885255 MODEL JAAIVD010000004;XM_032886493 XP_032742384 protein-coding 625930253 LOC116898375 small nuclear ribonucleoprotein E-like 4 66240900 66241169 + 116898375 MODEL JAAIVD010000003 pseudo 625930254 LOC116904648 U6 spliceosomal RNA 6 33359672 33359780 - 116904648 MODEL JAAIVD010000024;XR_004388351 snrna 625930257 Ube3c ubiquitin protein ligase E3C ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN protein K29-linked ubiquitination (ortholog); protein K48-linked ubiquitination (ortholog); protein polyubiquitination (ortholog); ASSOCIATED WITH NEURODEVELOPMENTAL DISORDER WITH ABSENT SPEECH AND MOVEMENT AND BEHAVIORAL ABNORMALITIES (ortholog); systemic juvenile rheumatoid arthritis (ortholog) 6 158840443 158940469 - 22301074;30032202 116904248 MODEL JAAIVD010000024;XM_032907206 XP_032763097 ubiquitin-protein ligase E3C protein-coding 625930284 Sae1 SUMO1 activating enzyme subunit 1 ENCODES a protein that exhibits ATP-dependent protein binding (ortholog); protein heterodimerization activity (ortholog); small protein activating enzyme binding (ortholog); INVOLVED IN positive regulation of protein localization to mitochondrion (ortholog); positive regulation of protein sumoylation (ortholog); protein sumoylation (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); SUMO activating enzyme complex (ortholog) 2 172681357 172734736 + 30032202 116892598 MODEL JAAIVD010000001;XM_032894379 XP_032750270 SUMO-activating enzyme subunit 1 protein-coding 625930297 A4gnt alpha-1,4-N-acetylglucosaminyltransferase ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); INVOLVED IN glycoprotein biosynthetic process (ortholog); negative regulation of epithelial cell proliferation (ortholog); protein O-linked glycosylation (ortholog); ASSOCIATED WITH genetic disease (ortholog); pancreatic cancer (ortholog) 8 90955560 90963880 + 30032202 116907759 MODEL JAAIVD010000027;XM_032910896;XM_032910897 XP_032766787;XP_032766788 protein-coding 625930306 LOC116912786 uncharacterized LOC116912786 11 7317236 7317746 - 116912786 MODEL JAAIVD010000006;XR_004389479 ncrna 625930310 Fgf6 fibroblast growth factor 6 INVOLVED IN cartilage condensation (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); myoblast differentiation (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; syndecan signaling pathway; ASSOCIATED WITH Acute Otitis Media (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); prostate carcinoma in situ (ortholog); FOUND IN sarcolemma (ortholog) 6 20877514 20886026 - 22301074;30032202 116904579 MODEL JAAIVD010000024;XM_032907376 XP_032763267 protein-coding 625930316 Sult6b1 sulfotransferase family 6B member 1 7 14329672 14354433 + 22301074;30032202 116905898 MODEL JAAIVD010000026;XM_032908888 XP_032764779 sulfotransferase 6B1 protein-coding 625930326 LOC116902948 vomeronasal type-1 receptor 97 6 124051256 124053448 + 22301074;30032202 116902948 MODEL JAAIVD010000024;XM_032905273 XP_032761164 protein-coding 625930331 LOC116891281 39S ribosomal protein L2, mitochondrial-like 2 52470513 52471466 + 116891281 MODEL JAAIVD010000001 pseudo 625930332 Rapgef6 Rap guanine nucleotide exchange factor 6 ENCODES a protein that exhibits GTP-dependent protein binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); phosphatidic acid binding (ortholog); INVOLVED IN establishment of endothelial intestinal barrier (ortholog); positive regulation of microvillus assembly (ortholog); FOUND IN apical plasma membrane (ortholog); cytosol (ortholog); endocytic vesicle (ortholog) 9 36974253 37137180 + 22301074;30032202 116908663 MODEL JAAIVD010000002;XM_032911940;XM_032911941;XM_032911943;XM_032911944;XM_032911945;XM_032911946;XM_032911947 XP_032767831;XP_032767832;XP_032767834;XP_032767835;XP_032767836;XP_032767837;XP_032767838 protein-coding 625930378 LOC116914468 60S ribosomal protein L13a-like 13 59230175 59230823 + 116914468 MODEL JAAIVD010000008;XR_004389749 pseudo 625930381 LOC116896014 annexin-2 receptor-like 3 176951484 176952096 + 116896014 MODEL JAAIVD010000012 pseudo 625930382 Mindy4 MINDY lysine 48 deubiquitinase 4 FOUND IN cytosol (ortholog) 6 85756866 85861403 - 30032202 116903759 MODEL JAAIVD010000024;XM_032906447 XP_032762338 probable ubiquitin carboxyl-terminal hydrolase MINDY-4 protein-coding 625930404 LOC116893663 40S ribosomal protein S4, X isoform-like 2 11870792 11871542 + 116893663 MODEL JAAIVD010000001 pseudo 625930405 LOC116905724 pantothenate kinase 3-like 7 269885 272132 - 116905724 MODEL JAAIVD010000026 pseudo 625930406 Fgf1 fibroblast growth factor 1 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); growth factor activity (ortholog); heparin binding (ortholog); INVOLVED IN activation of protein kinase B activity (ortholog); branch elongation involved in ureteric bud branching (ortholog); cellular response to heat (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); brain ischemia (ortholog); cleft lip (ortholog); FOUND IN cytosol (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) 15 6070376 6094010 + 22301074;30032202 116884682 MODEL JAAIVD010000010;XM_032885859;XM_032885860;XM_032885862 XP_032741750;XP_032741751;XP_032741753 protein-coding 625930420 Rnf169 ring finger protein 169 ENCODES a protein that exhibits K63-linked polyubiquitin modification-dependent protein binding (ortholog); nucleosome binding (ortholog); ubiquitin-modified histone reader activity (ortholog); INVOLVED IN DNA damage response (ortholog); double-strand break repair via homologous recombination (ortholog); negative regulation of double-strand break repair (ortholog); FOUND IN cytosol (ortholog); nuclear body (ortholog); nucleolus (ortholog) 2 98207591 98266323 - 30032202 116891732 MODEL JAAIVD010000001;XM_032893031 XP_032748922 E3 ubiquitin-protein ligase RNF169 protein-coding 625930430 LOC116885041 small nucleolar RNA SNORA17 15 42390264 42390395 - 116885041 MODEL JAAIVD010000010;XR_004385927 snorna 625930433 LOC116890113 uncharacterized protein CXorf49 homolog 1 234511094 234512821 - 116890113 MODEL JAAIVD010000025;XM_032890855 XP_032746746 protein-coding 625930438 Bcl3 BCL3 transcription coactivator ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); histone deacetylase binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN antimicrobial humoral response (ortholog); canonical NF-kappaB signal transduction (ortholog); defense response to bacterium (ortholog); PARTICIPATES IN nuclear factor kappa B signaling pathway; ASSOCIATED WITH atherosclerosis (ortholog); Dyslipidemias (ortholog); prion disease (ortholog); FOUND IN Bcl3-Bcl10 complex (ortholog); Bcl3/NF-kappaB2 complex (ortholog); cytoplasm (ortholog) 2 170786463 170802258 + 22301074 116892509 MODEL JAAIVD010000001;XM_032894262;XM_032894263;XM_032894264 XP_032750153;XP_032750154;XP_032750155 B-cell lymphoma 3 protein protein-coding 625930457 Supt5h SPT5 homolog, DSIF elongation factor subunit ENCODES a protein that exhibits enzyme binding (ortholog); protein heterodimerization activity (ortholog); RNA polymerase inhibitor activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription, elongation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of DNA-templated transcription, elongation (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription elongation pathway; FOUND IN DSIF complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 167669750 167697705 + 22301074;30032202 116892398 MODEL JAAIVD010000001;XM_032894070;XM_032894071;XM_032894073 XP_032749961;XP_032749962;XP_032749964 transcription elongation factor SPT5 protein-coding 625930496 Ift57 intraflagellar transport 57 INVOLVED IN apoptotic process (ortholog); heart looping (ortholog); left/right pattern formation (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Huntington's disease (ortholog); orofaciodigital syndrome XVIII (ortholog); FOUND IN axoneme (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 4 34112317 34168202 + 30032202 116898887 MODEL JAAIVD010000003;XM_032900264 XP_032756155 intraflagellar transport protein 57 homolog protein-coding 625930511 LOC116913690 40S ribosomal protein S11-like 12 19643573 19644054 + 116913690 MODEL JAAIVD010000007 pseudo 625930512 LOC116888278 ubiquitin-like protein 4A X 32838042 32838580 + 116888278 MODEL JAAIVD010000014 pseudo 625930513 LOC116911020 uncharacterized LOC116911020 10 34938484 34941465 - 116911020 MODEL JAAIVD010000005;XR_004389300 ncrna 625930518 Armc8 armadillo repeat containing 8 FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 8 90820288 90913982 - 22301074;30032202 116907183 MODEL JAAIVD010000027;XM_032910142;XM_032910143;XM_032910144 XP_032766033;XP_032766034;XP_032766035 armadillo repeat-containing protein 8 protein-coding 625930547 LOC116901946 small nuclear ribonucleoprotein F-like 5 106974809 106975098 - 116901946 MODEL JAAIVD010000023 pseudo 625930548 LOC116885932 coiled-coil domain-containing protein 121-like 16 41528578 41530067 - 116885932 MODEL JAAIVD010000004;XM_032887245 XP_032743136 protein-coding 625930552 Jup junction plakoglobin ENCODES a protein that exhibits alpha-catenin binding (ortholog); cadherin binding (ortholog); cell adhesion molecule binding (ortholog); INVOLVED IN bundle of His cell-Purkinje myocyte adhesion involved in cell communication (ortholog); cell adhesion (ortholog); cell migration (ortholog); PARTICIPATES IN E-cadherin signaling pathway; N-cadherin signaling pathway; ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); arrhythmogenic right ventricular dysplasia 12 (ortholog); Breast Neoplasms (ortholog); FOUND IN actin cytoskeleton (ortholog); adherens junction (ortholog); apicolateral plasma membrane (ortholog) 9 59673791 59700113 - 22301074;30032202 116908819 MODEL JAAIVD010000002;XM_032912236;XM_032912237;XM_032912238 XP_032768127;XP_032768128;XP_032768129 protein-coding 625930576 LOC116905013 60S ribosomal protein L31-like 1 154284377 154286333 + 116905013 MODEL JAAIVD010000025 pseudo 625930577 Sbk1 SH3 domain binding kinase 1 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN peptidyl-serine phosphorylation (ortholog); peptidyl-threonine phosphorylation (ortholog) 2 75654042 75698494 - 22301074;30032202 116891531 MODEL JAAIVD010000001;XM_032892680;XM_032892681 XP_032748571;XP_032748572 serine/threonine-protein kinase SBK1 protein-coding 625930588 Fam237a family with sequence similarity 237 member A FOUND IN extracellular region (ortholog) 4 137568044 137572216 + 116898198 MODEL JAAIVD010000003;XM_032899560 XP_032755451 protein FAM237A protein-coding 625930592 LOC116887321 colipase 18 5298426 5300796 + 22301074;30032202 116887321 MODEL JAAIVD010000013;XM_032888914;XM_032888915 XP_032744805;XP_032744806 protein-coding 625930603 Trnar-ucg transfer RNA arginine (anticodon UCG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889680 MODEL JAAIVD010000048 trna 625930604 Rnf149 ring finger protein 149 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN cellular response to xenobiotic stimulus (ortholog); negative regulation of MAPK cascade (ortholog); regulation of protein stability (ortholog) 4 115792775 115819453 - 116899321 MODEL JAAIVD010000003;XM_032900987 XP_032756878 E3 ubiquitin-protein ligase RNF149 protein-coding 625930615 Scoc short coiled-coil protein INVOLVED IN positive regulation of macroautophagy (ortholog); regulation of protein complex stability (ortholog); FOUND IN endosome (ortholog); Golgi apparatus (ortholog); trans-Golgi network (ortholog) 17 16785475 16813141 + 30032202 116886279 MODEL JAAIVD010000011;XM_032887703;XM_032887704;XM_032887705;XM_032887706 XP_032743594;XP_032743595;XP_032743596;XP_032743597 protein-coding 625930631 LOC116905491 uncharacterized LOC116905491 7 129160536 129164625 - 116905491 MODEL JAAIVD010000026;XR_004388544 ncrna 625930635 Twf1 twinfilin actin binding protein 1 ENCODES a protein that exhibits actin binding (ortholog); actin monomer binding (ortholog); ATP binding (ortholog); INVOLVED IN barbed-end actin filament capping (ortholog); conditioned place preference (ortholog); negative regulation of actin filament polymerization (ortholog); ASSOCIATED WITH lymphoma (ortholog); FOUND IN actin cytoskeleton (ortholog); cell-cell junction (ortholog); cytosol (ortholog) 1 267465470 267475678 - 30032202 116884330 MODEL JAAIVD010000025;XM_032885467 XP_032741358 twinfilin-1 protein-coding 625930648 LOC116892054 NHP2-like protein 1 1 60243085 60246011 - 22301074;30032202 116892054 MODEL JAAIVD010000025;XM_032893557 XP_032749448 protein-coding 625930652 Trnaq-cug transfer RNA glutamine (anticodon CUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41695453 41695524 + 116884211 MODEL JAAIVD010000009 trna 625930653 Msantd3 Myb/SANT DNA binding domain containing 3 1 101608531 101632307 + 116902083 MODEL JAAIVD010000025;XM_032904385;XM_032904390;XM_032904397 XP_032760276;XP_032760281;XP_032760288 myb/SANT-like DNA-binding domain-containing protein 3 protein-coding 625930666 Gabrb2 gamma-aminobutyric acid type A receptor subunit beta2 ENCODES a protein that exhibits chloride channel activity (ortholog); GABA receptor activity (ortholog); GABA-A receptor activity (ortholog); INVOLVED IN cellular response to histamine (ortholog); chloride transmembrane transport (ortholog); cochlea development (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Cerebral Visual Impairment and Intellectual Disability (ortholog); developmental and epileptic encephalopathy 92 (ortholog); FOUND IN dendritic spine (ortholog); GABA receptor complex (ortholog); GABA-A receptor complex (ortholog) 9 25286309 25493196 + 22301074;30032202 116909759 MODEL JAAIVD010000002;XM_032913444 XP_032769335 gamma-aminobutyric acid receptor subunit beta-2 protein-coding 625930681 Map3k20 mitogen-activated protein kinase kinase kinase 20 ENCODES a protein that exhibits ATP binding (ortholog); JUN kinase kinase kinase activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN cellular response to gamma radiation (ortholog); cellular response to UV-B (ortholog); cytoskeleton organization (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH centronuclear myopathy (ortholog); centronuclear myopathy 6 with fiber-type disproportion (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 5 49597289 49756609 + 22301074;30032202 116901512 MODEL JAAIVD010000023;XM_032903486 XP_032759377 protein-coding 625930705 LOC116913038 U6 spliceosomal RNA 11 14927802 14927908 + 116913038 MODEL JAAIVD010000006;XR_004389575 snrna 625930708 LOC116908217 Y-box-binding protein 1-like 8 73227635 73310585 - 116908217 MODEL JAAIVD010000027 pseudo 625930709 Kat2b lysine acetyltransferase 2B ENCODES a protein that exhibits acetyltransferase activity (ortholog); chromatin binding (ortholog); cyclin-dependent protein serine/threonine kinase inhibitor activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); cellular response to oxidative stress (ortholog); cellular response to parathyroid hormone stimulus (ortholog); PARTICIPATES IN cortisol signaling pathway; histone modification pathway; p53 signaling pathway; ASSOCIATED WITH breast cancer (ortholog); Coronary Disease (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN A band (ortholog); actomyosin (ortholog); ATAC complex (ortholog) 4 90593304 90698762 + 22301074;30032202 116899226 MODEL JAAIVD010000003;XM_032900827 XP_032756718 histone acetyltransferase KAT2B protein-coding 625930731 LOC116895958 igE-binding protein-like 3 142654308 142655948 + 22301074 116895958 MODEL JAAIVD010000012;XM_032897009 XP_032752900 protein-coding 625930735 LOC116899968 60S ribosomal protein L6-like 5 114301663 114308098 + 116899968 MODEL JAAIVD010000023 pseudo 625930736 Tlr2 toll like receptor 2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); diacyl lipopeptide binding (ortholog); identical protein binding (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); cell surface pattern recognition receptor signaling pathway (ortholog); cellular response to bacterial lipopeptide (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome 1 (ortholog); acne (ortholog); acute kidney failure (ortholog); FOUND IN cell body (ortholog); cell projection (ortholog); cell surface (ortholog) 3 69727695 69733850 + 22301074;30032202 116896742 MODEL JAAIVD010000012;XM_032898180;XM_032898181 XP_032754071;XP_032754072 toll-like receptor 2 protein-coding 625930746 LOC116885992 60S ribosomal protein L27-like 1 4216575 4216958 + 116885992 MODEL JAAIVD010000025 pseudo 625930747 Col11a2 collagen type XI alpha 2 chain INVOLVED IN cartilage development (ortholog); chondrocyte differentiation (ortholog); collagen fibril organization (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH autosomal dominant nonsyndromic deafness 13 (ortholog); autosomal dominant nonsyndromic deafness 33 (ortholog); autosomal recessive nonsyndromic deafness 53 (ortholog); FOUND IN collagen trimer (ortholog) 18 8258095 8287355 - 22301074 116887438 MODEL JAAIVD010000013;XM_032889051 XP_032744942 collagen alpha-2(XI) chain protein-coding 625930817 LOC116912702 endogenous retrovirus group K member 10 Pro protein-like 11 19678221 19678970 - 116912702 MODEL JAAIVD010000006 pseudo 625930818 Slc44a1 solute carrier family 44 member 1 ENCODES a protein that exhibits choline transmembrane transporter activity (ortholog); ethanolamine transmembrane transporter activity (ortholog); INVOLVED IN choline transport (ortholog); ethanolamine transport (ortholog); transmembrane transport (ortholog); ASSOCIATED WITH Childhood-onset Neurodegeneration with Ataxia, Tremor, Optic Atrophy, and Cognitive Decline (ortholog); high grade glioma (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); mitochondrial outer membrane (ortholog) 1 97219802 97346586 + 22301074;30032202 116901796 MODEL JAAIVD010000025;XM_032903954 XP_032759845 choline transporter-like protein 1 protein-coding 625930838 Ccdc166 coiled-coil domain containing 166 1 248299497 248301120 - 116912841 MODEL JAAIVD010000025;XM_032917049 XP_032772940 coiled-coil domain-containing protein 166 protein-coding 625930844 Wbp1l WW domain binding protein 1 like ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN CXCL12-activated CXCR4 signaling pathway (ortholog); hemopoiesis (ortholog); positive regulation of protein ubiquitination (ortholog); ASSOCIATED WITH nevoid basal cell carcinoma syndrome (ortholog) 2 46070045 46125883 + 116891254 MODEL JAAIVD010000001;XM_032892134;XM_032892135 XP_032748025;XP_032748026 WW domain binding protein 1-like protein-coding 625930855 LOC116911954 uncharacterized LOC116911954 11 90649399 90689548 - 116911954 MODEL JAAIVD010000006;XR_004389412 ncrna 625930860 KEG97_t22 tRNA-Pro MT 15340 15407 - 64988248 trna 625930861 LOC116900413 olfactory receptor 4S2 5 70307689 70308645 + 22301074 116900413 MODEL JAAIVD010000023;XM_032902157 XP_032758048 protein-coding 625930864 LOC116896900 uncharacterized LOC116896900 3 108940835 108945801 + 116896900 MODEL JAAIVD010000012;XR_004387377 ncrna 625930869 LOC116915140 small nucleolar RNA SNORA17 13 15685564 15685683 + 116915140 MODEL JAAIVD010000008 pseudo 625930870 Noto notochord homeobox ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN determination of left/right symmetry (ortholog); dorsal/ventral pattern formation (ortholog); embryonic pattern specification (ortholog) 6 60774704 60779409 - 22301074;30032202 116902969 MODEL JAAIVD010000024;XM_032905288 XP_032761179 homeobox protein notochord protein-coding 625930875 LOC116912686 40S ribosomal protein S11-like 11 16774126 16802140 - 30032202 116912686 MODEL JAAIVD010000006;XM_032916821 XP_032772712 protein-coding 625930879 Ms4a1 membrane spanning 4-domains A1 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); identical protein binding (ortholog); immunoglobulin binding (ortholog); INVOLVED IN B cell activation (ortholog); B cell differentiation (ortholog); B cell receptor signaling pathway (ortholog); ASSOCIATED WITH B-Cell Chronic Lymphocytic Leukemia (ortholog); common variable immunodeficiency (ortholog); common variable immunodeficiency 5 (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) 2 10716829 10730820 - 30032202 116893642 MODEL JAAIVD010000001;XM_032895356;XM_032895357;XM_032895358 XP_032751247;XP_032751248;XP_032751249 B-lymphocyte antigen CD20 protein-coding 625930899 LOC116898545 cofilin-1-like 4 150226924 150227420 + 116898545 MODEL JAAIVD010000003 pseudo 625930900 LOC116909451 histone deacetylase 1-like 9 14282027 14283490 + 116909451 MODEL JAAIVD010000002 pseudo 625930901 LOC116888199 igE-binding protein-like X 126092011 126092648 - 116888199 MODEL JAAIVD010000014 pseudo 625930902 LOC116913042 U6 spliceosomal RNA 11 33964503 33964609 + 116913042 MODEL JAAIVD010000006;XR_004389578 snrna 625930905 Ndufa1 NADH:ubiquinone oxidoreductase subunit A1 PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH genetic disease (ortholog); mitochondrial complex I deficiency (ortholog); nuclear type mitochondrial complex I deficiency 12 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) X 103357029 103359089 - 116888600 MODEL JAAIVD010000014;XM_032889896 XP_032745787 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 protein-coding 625930912 LOC116905015 Ig heavy chain V region 102-like 7 62495179 62505515 - 116905015 MODEL JAAIVD010000026 pseudo 625930913 LOC116884843 arfaptin-2-like 15 39900059 39901031 - 116884843 MODEL JAAIVD010000010 pseudo 625930914 Smad1 SMAD family member 1 ENCODES a protein that exhibits co-SMAD binding (ortholog); DEAD/H-box RNA helicase binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN anti-Mullerian hormone receptor signaling pathway (ortholog); BMP signaling pathway (ortholog); bone development (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH Cocaine-Related Disorders (ortholog); COVID-19 (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 17 20704883 20766033 + 22301074;30032202 116886114 MODEL JAAIVD010000011;XM_032887446;XM_032887448;XM_032887449 XP_032743337;XP_032743339;XP_032743340 mothers against decapentaplegic homolog 1 protein-coding 625930934 LOC116883329 histone deacetylase 1-like 14 55088095 55089408 + 116883329 MODEL JAAIVD010000009 pseudo 625930935 Mrpl41 mitochondrial ribosomal protein L41 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN translation (ortholog); FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog); ribonucleoprotein complex (ortholog) 5 12219022 12219915 + 22301074;30032202 116901329 MODEL JAAIVD010000023;XM_032903145 XP_032759036 39S ribosomal protein L41, mitochondrial protein-coding 625930941 LOC116898206 gamma-crystallin E 4 138940872 138943406 - 30032202 116898206 MODEL JAAIVD010000003;XM_032899564;XM_032899565 XP_032755455;XP_032755456 protein-coding 625930951 LOC116892879 nesprin-1-like 2 197277406 197459908 + 30032202 116892879 MODEL JAAIVD010000001;XM_032894789 XP_032750680 protein-coding 625930987 LOC116885949 uncharacterized LOC116885949 16 40653263 40654244 + 116885949 MODEL JAAIVD010000004;XR_004386050 ncrna 625930991 Trnan-guu transfer RNA asparagine (anticodon GUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 5441374 5441447 + 116884149 MODEL JAAIVD010000009 trna 625930992 Osbpl6 oxysterol binding protein like 6 INVOLVED IN intermembrane phospholipid transfer (ortholog); regulation of cholesterol transport (ortholog); FOUND IN cytosol (ortholog); early endosome membrane (ortholog); endoplasmic reticulum membrane (ortholog) 5 53848969 53945533 + 30032202 116901545 MODEL JAAIVD010000023;XM_032903529;XM_032903530 XP_032759420;XP_032759421 oxysterol-binding protein-related protein 6 protein-coding 625931027 LOC116885783 40S ribosomal protein S2-like 1 39738357 39739233 + 116885783 MODEL JAAIVD010000025 pseudo 625931028 LOC116887431 patr class II histocompatibility antigen, DO beta chain-like 18 8053528 8058460 - 22301074;30032202 116887431 MODEL JAAIVD010000013;XM_032889046 XP_032744937 protein-coding 625931035 Cxcr2 C-X-C motif chemokine receptor 2 ENCODES a protein that exhibits C-X-C chemokine receptor activity (ortholog); chemokine receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); cell surface receptor signaling pathway (ortholog); cellular defense response (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); acute pyelonephritis (ortholog); allergic disease (ortholog); FOUND IN cell surface (ortholog); mast cell granule (ortholog); membrane (ortholog) 4 147603054 147609383 + 22301074;30032202 116898222 MODEL JAAIVD010000003;XM_032899577 XP_032755468 C-X-C chemokine receptor type 2 protein-coding 625931041 LOC116890365 U6 spliceosomal RNA 1 59811518 59811629 - 116890365 MODEL JAAIVD010000025;XR_004386583 snrna 625931044 Timmdc1 translocase of inner mitochondrial membrane domain containing 1 ASSOCIATED WITH Leigh disease (ortholog); nuclear type mitochondrial complex I deficiency 1 (ortholog); nuclear type mitochondrial complex I deficiency 31 (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) 4 23449205 23474285 - 30032202 116898846 MODEL JAAIVD010000003;XM_032900201 XP_032756092 complex I assembly factor TIMMDC1, mitochondrial protein-coding 625931055 LOC116904328 peroxiredoxin-6-like 6 64447187 64454510 + 116904328 MODEL JAAIVD010000024 pseudo 625931056 Trnak-cuu transfer RNA lysine (anticodon CUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 7 84628158 84628230 - 116906527 MODEL JAAIVD010000026 trna 625931057 Kcnk6 potassium two pore domain channel subfamily K member 6 ENCODES a protein that exhibits potassium channel activity (ortholog); INVOLVED IN negative regulation of systemic arterial blood pressure (ortholog); positive regulation of NLRP3 inflammasome complex assembly (ortholog); regulation of lysosome size (ortholog); ASSOCIATED WITH brain infarction (ortholog); FOUND IN late endosome membrane (ortholog); lysosomal membrane (ortholog) 2 166713351 166722198 + 22301074;30032202 116892357 MODEL JAAIVD010000001;XM_032894013 XP_032749904 potassium channel subfamily K member 6 protein-coding 625931064 LOC116890093 60S ribosomal protein L13-like 1 230499937 230500561 + 116890093 MODEL JAAIVD010000025 pseudo 625931065 LOC116904819 U6 spliceosomal RNA 6 22020008 22020114 - 116904819 MODEL JAAIVD010000024;XR_004388470 snrna 625931068 LOC116903794 HCLS1-associated protein X-1-like 6 17905606 17906864 - 116903794 MODEL JAAIVD010000024 pseudo 625931069 LOC116906946 zinc finger protein 709-like 1 157826140 157845713 - 30032202 116906946 MODEL JAAIVD010000025;XM_032909871 XP_032765762 protein-coding 625931077 Dnai3 dynein axonemal intermediate chain 3 ENCODES a protein that exhibits Arp2/3 complex binding (ortholog); INVOLVED IN negative regulation of Arp2/3 complex-mediated actin nucleation (ortholog); negative regulation of cell migration (ortholog); positive regulation of osteoblast differentiation (ortholog); ASSOCIATED WITH Encephalocele (ortholog); FOUND IN axonemal dynein complex (ortholog); cytoplasm (ortholog) 3 14800144 14858898 + 30032202 116896174 MODEL JAAIVD010000012;XM_032897212 XP_032753103 Wdr63 WD repeat domain 63;WD repeat-containing protein 63 protein-coding 625931104 Megf6 multiple EGF like domains 6 1 6449633 6468563 - 22301074 116890000 MODEL JAAIVD010000025;XM_032890787 XP_032746678 multiple epidermal growth factor-like domains protein 6 protein-coding 625931135 LOC116885531 2'-5'-oligoadenylate synthase-like protein 2 16 38914255 38926193 - 22301074;30032202 116885531 MODEL JAAIVD010000004;XM_032886829 XP_032742720 protein-coding 625931145 LOC116914200 small nucleolar RNA SNORA70 12 90004592 90004719 - 116914200 MODEL JAAIVD010000007 pseudo 625931146 LOC116905371 uncharacterized LOC116905371 7 114696582 114699902 - 116905371 MODEL JAAIVD010000026;XR_004388518 ncrna 625931150 Pfkm phosphofructokinase, muscle ENCODES a protein that exhibits 6-phosphofructokinase activity (ortholog); AMP binding (ortholog); ATP binding (ortholog); INVOLVED IN canonical glycolysis (ortholog); fructose 1,6-bisphosphate metabolic process (ortholog); fructose 6-phosphate metabolic process (ortholog); PARTICIPATES IN Fanconi syndrome pathway; glycogen storage disease type VII pathway; glycolysis pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); genetic disease (ortholog); glycogen storage disease (ortholog); FOUND IN 6-phosphofructokinase complex (ortholog); apical plasma membrane (ortholog); cytosol (ortholog) 1 270920090 270943768 + 22301074;30032202 116884663 MODEL JAAIVD010000025;XM_032885836 XP_032741727 ATP-dependent 6-phosphofructokinase, muscle type protein-coding 625931177 Cks1b CDC28 protein kinase regulatory subunit 1B INVOLVED IN cell population proliferation (ortholog); mitotic cell cycle phase transition (ortholog); regulation of DNA-templated transcription (ortholog) 3 64247682 64251411 + 30032202 116896641 MODEL JAAIVD010000012;XM_032897961 XP_032753852 cyclin-dependent kinases regulatory subunit 1 protein-coding 625931184 LOC116890006 olfactory receptor 6C4-like 1 183902805 183903743 - 22301074;30032202 116890006 MODEL JAAIVD010000025;XM_032890791 XP_032746682 protein-coding 625931187 Lmnb2 lamin B2 ENCODES a protein that exhibits identical protein binding (ortholog); structural constituent of cytoskeleton (ortholog); ASSOCIATED WITH autosomal dominant primary microcephaly 27 (ortholog); Myoclonic Epilepsies (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN lamin filament (ortholog); nuclear envelope (ortholog); nuclear lamina (ortholog) 1 153965498 153983162 + 116904711 MODEL JAAIVD010000025;XM_032907441;XM_032907442 XP_032763332;XP_032763333 lamin-B2 protein-coding 625931206 Spidr scaffold protein involved in DNA repair INVOLVED IN cellular response to camptothecin (ortholog); cellular response to hydroxyurea (ortholog); cellular response to ionizing radiation (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); ovarian dysgenesis 9 (ortholog); primary ovarian insufficiency 16 (ortholog); FOUND IN nuclear chromosome (ortholog); nucleoplasm (ortholog) 4 1226067 1448030 + 30032202 116898609 MODEL JAAIVD010000003;XM_032899807 XP_032755698 DNA repair-scaffolding protein protein-coding 625931230 Rhno1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); cellular response to UV (ortholog); DNA damage checkpoint signaling (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); nucleus (ortholog) 6 19337463 19343212 + 22301074;30032202 116903215 MODEL JAAIVD010000024;XM_032905591;XM_032905592;XM_032905593 XP_032761482;XP_032761483;XP_032761484 RAD9, HUS1, RAD1-interacting nuclear orphan protein 1 protein-coding 625931243 LOC116899365 serine/arginine-rich splicing factor 7-like 4 122413845 122416393 + 116899365 MODEL JAAIVD010000003;XR_004387720 pseudo 625931246 Rnasek ribonuclease K ENCODES a protein that exhibits RNA endonuclease activity (ortholog); INVOLVED IN endosomal lumen acidification (ortholog); proton transmembrane transport (ortholog); receptor-mediated endocytosis (ortholog); FOUND IN membrane (ortholog) 9 49840595 49842337 - 30032202 116909464 MODEL JAAIVD010000002;XM_032913054 XP_032768945 ribonuclease kappa protein-coding 625931253 LOC116894018 putative olfactory receptor 52P1 2 101898195 101899142 + 22301074 116894018 MODEL JAAIVD010000001;XM_032895733 XP_032751624 protein-coding 625931256 Med27 mediator complex subunit 27 ENCODES a protein that exhibits transcription coactivator activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN protein ubiquitination (ortholog); regulation of transcription by RNA polymerase II (ortholog); stem cell population maintenance (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); NEURODEVELOPMENTAL DISORDER WITH SPASTICITY, CATARACTS, AND CEREBELLAR HYPOPLASIA (ortholog); FOUND IN mediator complex (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 5 7201861 7374320 - 22301074;30032202 116901218 MODEL JAAIVD010000023;XM_032902936 XP_032758827 mediator of RNA polymerase II transcription subunit 27 protein-coding 625931268 LOC116894764 transmembrane protein 127-like 2 195230004 195230784 - 116894764 MODEL JAAIVD010000001 pseudo 625931269 LOC116893776 tear acid lipase-like protein 2 33432444 33442882 - 30032202 116893776 MODEL JAAIVD010000001;XM_032895475 XP_032751366 protein-coding 625931280 LOC116898942 Down syndrome cell adhesion molecule homolog 4 47418583 47956376 + 30032202 116898942 MODEL JAAIVD010000003;XM_032900358;XM_032900359 XP_032756249;XP_032756250 protein-coding 625931302 LOC116907773 olfactory receptor 151-like 8 33888367 33889296 - 22301074;30032202 116907773 MODEL JAAIVD010000027;XM_032910914 XP_032766805 protein-coding 625931305 Carm1 coactivator associated arginine methyltransferase 1 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); histone H3R17 methyltransferase activity (ortholog); histone H3R2 methyltransferase activity (ortholog); INVOLVED IN endochondral bone morphogenesis (ortholog); estrogen receptor signaling pathway (ortholog); gene expression (ortholog); PARTICIPATES IN androgen signaling pathway; estrogen signaling pathway; histone modification pathway; ASSOCIATED WITH asthma (ortholog); estrogen-receptor positive breast cancer (ortholog); hepatocellular adenoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear replication fork (ortholog) 8 17816644 17859717 + 22301074;30032202 116908134 MODEL JAAIVD010000027;XM_032911424;XM_032911426;XM_032911427 XP_032767315;XP_032767317;XP_032767318 histone-arginine methyltransferase CARM1 protein-coding 625931328 Aco2 aconitase 2 ENCODES a protein that exhibits 3 iron, 4 sulfur cluster binding (ortholog); 4 iron, 4 sulfur cluster binding (ortholog); aconitate hydratase activity (ortholog); INVOLVED IN citrate metabolic process (ortholog); isocitrate metabolic process (ortholog); liver development (ortholog); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; mitochondrial complex II deficiency pathway; ASSOCIATED WITH acute intermittent porphyria (ortholog); adult respiratory distress syndrome (ortholog); COVID-19 (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 1 251610086 251651782 + 22301074;30032202 116914088 MODEL JAAIVD010000025;XM_032918399 XP_032774290 aconitate hydratase, mitochondrial protein-coding 625931350 LOC116887498 uncharacterized LOC116887498 18 9228012 9265359 + 116887498 MODEL JAAIVD010000013;XR_004386224 ncrna 625931354 LOC116903756 26S proteasome non-ATPase regulatory subunit 12-like 1 141008663 141110602 - 116903756 MODEL JAAIVD010000025 pseudo 625931355 LOC116915006 ESF1 homolog 13 32639648 32641197 + 116915006 MODEL JAAIVD010000008 pseudo 625931356 LOC116889621 aspartate aminotransferase, mitochondrial-like 1 142324133 142325436 - 116889621 MODEL JAAIVD010000025;XR_004386505 pseudo 625931359 LOC116886447 dnaJ homolog subfamily C member 2-like 17 16779804 16781084 - 30032202 116886447 MODEL JAAIVD010000011;XM_032887947 XP_032743838 protein-coding 625931364 LOC116890441 small nucleolar RNA SNORA70 1 272060539 272060670 - 116890441 MODEL JAAIVD010000025;XR_004386637 snorna 625931367 LOC116893229 RING finger and CHY zinc finger domain-containing protein 1-like 2 116484710 116486659 + 116893229 MODEL JAAIVD010000001 pseudo 625931368 LOC116893057 tear acid lipase-like protein 2 33521749 33551534 - 30032202 116893057 MODEL JAAIVD010000001;XM_032895018 XP_032750909 protein-coding 625931379 LOC116896818 vomeronasal type-2 receptor 1-like 3 91026816 91057823 + 22301074;30032202 116896818 MODEL JAAIVD010000012;XM_032898293 XP_032754184 protein-coding 625931387 LOC116886717 5S ribosomal RNA 17 43146780 43146898 - 116886717 MODEL JAAIVD010000011;XR_004386129 rrna 625931390 LOC116905058 uncharacterized LOC116905058 7 68479667 68482767 + 116905058 MODEL JAAIVD010000026;XR_004388481 ncrna 625931394 LOC116892712 zinc finger protein 773-like 2 179038562 179044682 + 22301074 116892712 MODEL JAAIVD010000001;XM_032894578 XP_032750469 protein-coding 625931402 Ccser2 coiled-coil serine rich protein 2 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN microtubule bundle formation (ortholog); FOUND IN microtubule cytoskeleton (ortholog) 13 15333141 15440867 - 30032202 116914793 MODEL JAAIVD010000008;XM_032919239;XM_032919240 XP_032775130;XP_032775131 serine-rich coiled-coil domain-containing protein 2 protein-coding 625931422 Trnar-ucu transfer RNA arginine (anticodon UCU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41794351 41794436 + 116884219 MODEL JAAIVD010000009 trna 625931423 Pi4k2b phosphatidylinositol 4-kinase type 2 beta ENCODES a protein that exhibits 1-phosphatidylinositol 4-kinase activity (ortholog); INVOLVED IN phosphatidylinositol phosphate biosynthetic process (ortholog); ASSOCIATED WITH autistic disorder (ortholog); FOUND IN cytosol (ortholog); early endosome membrane (ortholog); endoplasmic reticulum membrane (ortholog) 11 53379885 53408473 - 30032202 116912246 MODEL JAAIVD010000006;XM_032916228 XP_032772119 phosphatidylinositol 4-kinase type 2-beta protein-coding 625931437 LOC116896097 ras GTPase-activating-like protein IQGAP2 3 222523558 222566084 + 30032202 116896097 MODEL JAAIVD010000012;XM_032897069 XP_032752960 protein-coding 625931448 LOC116908714 uncharacterized LOC116908714 9 64945892 64947690 - 116908714 MODEL JAAIVD010000002;XR_004389014 ncrna 625931452 Rorb RAR related orphan receptor B ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN amacrine cell differentiation (ortholog); cellular response to retinoic acid (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH endometriosis (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 2 18977850 19149422 - 22301074;30032202 116891020 MODEL JAAIVD010000001;XM_032891700;XM_032891701 XP_032747591;XP_032747592 nuclear receptor ROR-beta protein-coding 625931469 Trnak-cuu transfer RNA lysine (anticodon CUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 37619155 37619230 - 116895141 MODEL JAAIVD010000001 trna 625931470 Plat plasminogen activator, tissue type ENCODES a protein that exhibits phosphoprotein binding (ortholog); serine-type endopeptidase activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); cellular response to luteinizing hormone stimulus (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute promyelocytic leukemia (ortholog); Acute Traumatic Coagulopathy (ortholog); FOUND IN apical part of cell (ortholog); cell surface (ortholog); cytoplasm (ortholog) 13 63641452 63665486 - 22301074;30032202 116914579 MODEL JAAIVD010000008;XM_032918938 XP_032774829 tissue-type plasminogen activator protein-coding 625931488 LOC116885497 disintegrin and metalloproteinase domain-containing protein 1 16 32286491 32289560 + 22301074;30032202 116885497 MODEL JAAIVD010000004;XM_032886789 XP_032742680 protein-coding 625931493 LOC116903298 vomeronasal type-2 receptor 26-like 6 23809709 23828620 - 22301074;30032202 116903298 MODEL JAAIVD010000024;XM_032905721 XP_032761612 protein-coding 625931501 Mmp12 matrix metallopeptidase 12 ENCODES a protein that exhibits calcium ion binding (ortholog); collagen binding (ortholog); core promoter sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to virus (ortholog); elastin catabolic process (ortholog); lung alveolus development (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Alport syndrome (ortholog); anti-basement membrane glomerulonephritis (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); nucleus (ortholog) 8 3638233 3646822 + 22301074;30032202 116906975 MODEL JAAIVD010000027;XM_032909895 XP_032765786 macrophage metalloelastase protein-coding 625931513 LOC116902508 small nucleolar RNA SNORD36 5 9741660 9741727 - 116902508 MODEL JAAIVD010000023;XR_004388118 snorna 625931516 LOC116888526 60 kDa heat shock protein, mitochondrial-like X 55386273 55388109 + 116888526 MODEL JAAIVD010000014 pseudo 625931517 LOC116887566 frataxin, mitochondrial-like 18 42101392 42104234 + 116887566 MODEL JAAIVD010000013 pseudo 625931518 Engase endo-beta-N-acetylglucosaminidase ENCODES a protein that exhibits mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity (ortholog); INVOLVED IN protein deglycosylation (ortholog) 9 65573366 65587278 - 22301074;30032202 116909474 MODEL JAAIVD010000002;XM_032913064;XM_032913065;XM_032913066;XM_032913067;XM_032913068 XP_032768955;XP_032768956;XP_032768957;XP_032768958;XP_032768959 cytosolic endo-beta-N-acetylglucosaminidase protein-coding 625931552 Pclaf PCNA clamp associated factor ENCODES a protein that exhibits chromatin binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN centrosome cycle (ortholog); DNA damage response (ortholog); DNA replication (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog); nucleus (ortholog); perinuclear region of cytoplasm (ortholog) 8 60211429 60224491 + 30032202 116906645 MODEL JAAIVD010000027;XM_032909422 XP_032765313 PCNA-associated factor protein-coding 625931560 Zscan29 zinc finger and SCAN domain containing 29 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog) 5 99320064 99324058 - 116901858 MODEL JAAIVD010000023;XM_032904055 XP_032759946 zinc finger and SCAN domain-containing protein 29 protein-coding 625931566 LOC116911600 E3 ubiquitin-protein ligase RNF138-like 10 22587140 22620282 - 116911600 MODEL JAAIVD010000005 pseudo 625931567 LOC116895076 small nucleolar RNA SNORA12 2 43646366 43646511 - 116895076 MODEL JAAIVD010000001;XR_004387245 snorna 625931570 Rgs3 regulator of G protein signaling 3 PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH bladder disease (ortholog); Experimental Liver Cirrhosis (ortholog); lesion of sciatic nerve (ortholog); FOUND IN nucleus (ortholog); plasma membrane (ortholog) 1 90824171 90946971 - 22301074;30032202 116901325 MODEL JAAIVD010000025;XM_032903143;XM_032903152;XM_032903161;XM_032903169;XM_032903178;XM_032903188;XM_032903197 XP_032759034;XP_032759043;XP_032759052;XP_032759060;XP_032759069;XP_032759079;XP_032759088 regulator of G-protein signaling 3 protein-coding 625931617 Anxa7 annexin A7 ENCODES a protein that exhibits calcium-dependent phospholipid binding (ortholog); calcium-dependent protein binding (ortholog); GTPase-dependent fusogenic activity (ortholog); INVOLVED IN autophagy (ortholog); cell population proliferation (ortholog); epithelial cell differentiation (ortholog); ASSOCIATED WITH breast cancer (ortholog); colon adenocarcinoma (ortholog); Liver Neoplasms (ortholog); FOUND IN alveolar lamellar body (ortholog); chromaffin granule membrane (ortholog); cytosol (ortholog) 12 90260984 90288574 - 22301074;30032202 116913383 MODEL JAAIVD010000007;XM_032917559;XM_032917560;XM_032917561;XM_032917562 XP_032773450;XP_032773451;XP_032773452;XP_032773453 protein-coding 625931645 Med24 mediator complex subunit 24 ENCODES a protein that exhibits histone acetyltransferase activity (ortholog); nuclear thyroid hormone receptor binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription initiation by RNA polymerase II (ortholog); protein ubiquitination (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH Dwarfism (ortholog); FOUND IN mediator complex (ortholog); nucleus (ortholog); ubiquitin ligase complex (ortholog) 9 55706326 55731651 + 22301074;30032202 116909739 MODEL JAAIVD010000002;XM_032913417 XP_032769308 mediator of RNA polymerase II transcription subunit 24 protein-coding 625931676 LOC116894100 olfactory receptor 688-like 2 103462467 103463434 + 116894100 MODEL JAAIVD010000001 pseudo 625931677 Mtif2 mitochondrial translational initiation factor 2 ENCODES a protein that exhibits translation initiation factor activity (ortholog); INVOLVED IN formation of translation preinitiation complex (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN mitochondrion (ortholog) 11 97145951 97164764 + 22301074 116912164 MODEL JAAIVD010000006;XM_032916084 XP_032771975 translation initiation factor IF-2, mitochondrial protein-coding 625931695 Cbx1 chromobox 1 ENCODES a protein that exhibits enzyme binding (ortholog); histone H1K26me1 reader activity (ortholog); histone H1K26me2 reader activity (ortholog); INVOLVED IN DNA damage response (ortholog); gene expression (ortholog); heterochromatin formation (ortholog); ASSOCIATED WITH prostate cancer (ortholog); Prostatic Neoplasms (ortholog); FOUND IN chromatin (ortholog); chromocenter (ortholog); chromosome, centromeric region (ortholog) 9 57578583 57598864 - 22301074;30032202 116909253 MODEL JAAIVD010000002;XM_032912776;XM_032912777 XP_032768667;XP_032768668 chromobox protein homolog 1 protein-coding 625931706 Ctcf CCCTC-binding factor ENCODES a protein that exhibits chromatin binding (ortholog); chromatin insulator sequence binding (ortholog); chromatin loop anchoring activity (ortholog); INVOLVED IN cardiac muscle cell development (ortholog); cardiac muscle cell differentiation (ortholog); chromatin looping (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 21 (ortholog); basal cell carcinoma (ortholog); breast cancer (ortholog); FOUND IN chromosome, centromeric region (ortholog); condensed chromosome (ortholog); dense fibrillar component (ortholog) 17 25368857 25417192 + 30032202 116886444 MODEL JAAIVD010000011;XM_032887938;XM_032887939;XM_032887940;XM_032887941 XP_032743829;XP_032743830;XP_032743831;XP_032743832 transcriptional repressor CTCF protein-coding 625931729 LOC116884540 cyclin-dependent kinase 1-like 15 3081195 3082058 - 116884540 MODEL JAAIVD010000010 pseudo 625931730 LOC116897423 U6 spliceosomal RNA 3 64579966 64580072 + 116897423 MODEL JAAIVD010000012;XR_004387465 snrna 625931733 Pcyox1l prenylcysteine oxidase 1 like ENCODES a protein that exhibits prenylcysteine oxidase activity (ortholog); INVOLVED IN neutrophil-mediated killing of bacterium (ortholog); FOUND IN extracellular region (ortholog) 15 70248535 70259287 + 22301074;30032202 116884684 MODEL JAAIVD010000010;XM_032885864 XP_032741755 prenylcysteine oxidase-like protein-coding 625931743 C1H1orf232 chromosome 1 C1orf232 homolog 1 23993985 23997153 - 116886751 MODEL JAAIVD010000025;XM_032888230 XP_032744121 uncharacterized protein C1orf232 homolog protein-coding 625931750 Lmnb1 lamin B1 ENCODES a protein that exhibits double-stranded DNA binding (ortholog); phospholipase binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cellular response to 2,3,7,8-tetrachlorodibenzodioxine (ortholog); cellular response to corticosterone stimulus (ortholog); cellular response to L-glutamate (ortholog); ASSOCIATED WITH adult onset demyelinating leukodystrophy (ortholog); Animal Disease Models (ortholog); autosomal dominant primary microcephaly 26 (ortholog); FOUND IN lamin filament (ortholog); nuclear envelope (ortholog); nuclear inner membrane (ortholog) 15 75083432 75125925 - 116884531 MODEL JAAIVD010000010;XM_032885666 XP_032741557 lamin-B1 protein-coding 625931765 LOC116900081 protein crumbs homolog 1-like 5 17334944 17378530 - 116900081 MODEL JAAIVD010000023 pseudo 625931766 LOC116895388 cofilin-1-like 3 57279625 57280233 - 116895388 MODEL JAAIVD010000012 pseudo 625931767 Ndst1 N-deacetylase and N-sulfotransferase 1 ENCODES a protein that exhibits deacetylase activity (ortholog); heparan sulfate N-deacetylase activity (ortholog); heparan sulfate N-sulfotransferase activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); aorta development (ortholog); cardiac septum development (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 46 (ortholog); complex cortical dysplasia with other brain malformations (ortholog); congenital diaphragmatic hernia (ortholog); FOUND IN Golgi apparatus (ortholog); trans-Golgi network membrane (ortholog) 15 71234350 71258398 + 22301074;30032202 116884410 MODEL JAAIVD010000010;XM_032885509 XP_032741400 bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 protein-coding 625931784 Kank3 KN motif and ankyrin repeat domains 3 ASSOCIATED WITH COVID-19 (ortholog) 1 158593247 158600388 - 22301074;30032202 116907004 MODEL JAAIVD010000025;XM_032909940;XR_004388795 XP_032765831 KN motif and ankyrin repeat domain-containing protein 3 protein-coding 625931802 Cmas cytidine monophosphate N-acetylneuraminic acid synthetase ENCODES a protein that exhibits N-acylneuraminate cytidylyltransferase activity (ortholog); INVOLVED IN CMP-N-acetylneuraminate biosynthetic process (ortholog); N-acetylneuraminate metabolic process (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; sialic acid storage disease pathway; ASSOCIATED WITH focal segmental glomerulosclerosis (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 6 523597 542285 + 30032202 116903070 MODEL JAAIVD010000024;XM_032905369 XP_032761260 N-acylneuraminate cytidylyltransferase protein-coding 625931814 LOC116908123 uncharacterized LOC116908123 8 99260570 99264247 + 116908123 MODEL JAAIVD010000027;XM_032911413 XP_032767304 uncharacterized protein LOC116908123 protein-coding 625931818 LOC116906935 zinc finger protein 709-like 1 157786317 157801306 + 30032202 116906935 MODEL JAAIVD010000025;XM_032909862 XP_032765753 protein-coding 625931826 LOC116902155 high mobility group protein B1-like 5 133656406 133657140 + 116902155 MODEL JAAIVD010000023 pseudo 625931827 Mlh1 mutL homolog 1 ENCODES a protein that exhibits chromatin binding (ortholog); enzyme activator activity (ortholog); enzyme binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); double-strand break repair via nonhomologous end joining (ortholog); PARTICIPATES IN altered mismatch repair pathway; colorectal cancer pathway; endometrial cancer pathway; ASSOCIATED WITH bile duct cancer (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chiasma (ortholog); chromosome (ortholog); condensed chromosome (ortholog) 8 101794931 101834789 - 22301074;30032202 116907702 MODEL JAAIVD010000027;XM_032910825 XP_032766716 DNA mismatch repair protein Mlh1 protein-coding 625931850 LOC116889065 solute carrier family 25 member 39-like X 23679018 23679908 - 116889065 MODEL JAAIVD010000014 pseudo 625931851 Crnn cornulin INVOLVED IN cell-cell adhesion (ortholog); keratinocyte activation (ortholog); response to heat (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog) 3 120459854 120462164 + 22301074;30032202 116895536 MODEL JAAIVD010000012;XM_032896781 XP_032752672 protein-coding 625931855 Unc93b1 unc-93B1 regulator of TLR signaling ENCODES a protein that exhibits Toll-like receptor binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); cell morphogenesis (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Experimental Liver Cirrhosis (ortholog); Herpes Simplex Encephalitis (ortholog); FOUND IN early phagosome (ortholog); endoplasmic reticulum (ortholog); endosome (ortholog) 2 3703387 3714253 - 30032202 116890799 MODEL JAAIVD010000001;XM_032891278 XP_032747169 protein unc-93 homolog B1;unc-93 homolog B1, TLR signaling regulator protein-coding 625931869 LOC116908187 thrombospondin type-1 domain-containing protein 4-like 8 54692138 54818518 - 30032202 116908187 MODEL JAAIVD010000027;XM_032911474 XP_032767365 protein-coding 625931877 Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 INVOLVED IN brain development (ortholog); cerebral cortex radially oriented cell migration (ortholog); dopamine metabolic process (ortholog); ASSOCIATED WITH acute megakaryocytic leukemia (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); dendrite (ortholog) 18 3974914 4034840 + 22301074;30032202 116887015 MODEL JAAIVD010000013;XM_032888503 XP_032744394 MAM domain-containing glycosylphosphatidylinositol anchor protein 1 protein-coding 625931898 LOC116903489 uncharacterized LOC116903489 6 54778868 54779859 + 116903489 MODEL JAAIVD010000024;XR_004388280 ncrna 625931902 LOC116887605 alpha/beta hydrolase domain-containing protein 17C-like 18 9402769 9403968 - 116887605 MODEL JAAIVD010000013 pseudo 625931903 LOC116904572 killer cell lectin-like receptor subfamily B member 1A 6 19070136 19081565 + 116904572 MODEL JAAIVD010000024;XM_032907370;XM_032907371 XP_032763261;XP_032763262 protein-coding 625931914 LOC116886363 40S ribosomal protein S16-like 17 31753778 31754254 + 116886363 MODEL JAAIVD010000011 pseudo 625931915 Wdr37 WD repeat domain 37 INVOLVED IN corpus callosum development (ortholog); lymphocyte homeostasis (ortholog); ASSOCIATED WITH cerebellar hypoplasia (ortholog); coloboma (ortholog); Developmental Disabilities (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 14 22517600 22572256 - 22301074;30032202 116884039 MODEL JAAIVD010000009;XM_032885283;XM_032885284 XP_032741174;XP_032741175 WD repeat-containing protein 37 protein-coding 625931936 Cmc1 C-X9-C motif containing 1 ENCODES a protein that exhibits protein folding chaperone (ortholog); INVOLVED IN mitochondrial respiratory chain complex IV assembly (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) 8 109330323 109394346 - 30032202 116907887 MODEL JAAIVD010000027;XM_032911076 XP_032766967 COX assembly mitochondrial protein homolog protein-coding 625931944 LOC116907276 forkhead box protein K2-like 8 16245102 16258545 + 116907276 MODEL JAAIVD010000027 pseudo 625931945 Ucp3 uncoupling protein 3 ENCODES a protein that exhibits calcium ion transmembrane transporter activity (ortholog); oxidative phosphorylation uncoupler activity (ortholog); proton transmembrane transporter activity (ortholog); INVOLVED IN cellular response to hormone stimulus (ortholog); fatty acid metabolic process (ortholog); lipid hydroperoxide transport (ortholog); ASSOCIATED WITH congestive heart failure (ortholog); coronary restenosis (ortholog); diabetes mellitus (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 2 98769576 98782637 + 22301074;30032202 116893966 MODEL JAAIVD010000001;XM_032895685 XP_032751576 mitochondrial uncoupling protein 3 protein-coding 625931956 LOC116900285 40S ribosomal protein S2-like 5 63535972 63536807 + 116900285 MODEL JAAIVD010000023 pseudo 625931957 Cog8 component of oligomeric golgi complex 8 INVOLVED IN Golgi organization (ortholog); retrograde transport, vesicle recycling within Golgi (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation type IIh (ortholog); genetic disease (ortholog); FOUND IN COG complex (ortholog); Golgi apparatus (ortholog) 17 26772948 26783929 - 22301074;30032202 116886633 MODEL JAAIVD010000011;XM_032888138 XP_032744029 conserved oligomeric Golgi complex subunit 8 protein-coding 625931966 LOC116906621 40S ribosomal protein S2-like 8 10214736 10225117 - 116906621 MODEL JAAIVD010000027 pseudo 625931967 LOC116895022 U1 spliceosomal RNA 2 30092791 30092952 + 116895022 MODEL JAAIVD010000001;XR_004387208 snrna 625931970 Vash1 vasohibin 1 ENCODES a protein that exhibits actin binding (ortholog); metallocarboxypeptidase activity (ortholog); INVOLVED IN angiogenesis (ortholog); labyrinthine layer blood vessel development (ortholog); negative regulation of angiogenesis (ortholog); ASSOCIATED WITH liver cirrhosis (ortholog); portal hypertension (ortholog); FOUND IN apical part of cell (ortholog); cytoplasm (ortholog); cytosol (ortholog) 7 100767763 100781077 + 22301074;30032202 116905307 MODEL JAAIVD010000026;XM_032908191 XP_032764082 tubulinyl-Tyr carboxypeptidase 1 protein-coding 625931981 Tecrl trans-2,3-enoyl-CoA reductase like ASSOCIATED WITH catecholaminergic polymorphic ventricular tachycardia (ortholog); catecholaminergic polymorphic ventricular tachycardia 3 (ortholog); long QT syndrome (ortholog); FOUND IN endoplasmic reticulum (ortholog) 11 39776772 39840986 - 22301074;30032202 116912513 MODEL JAAIVD010000006;XM_032916600 XP_032772491 trans-2,3-enoyl-CoA reductase-like protein-coding 625931997 LOC116910292 alpha-enolase-like 9 46256670 46260375 - 116910292 MODEL JAAIVD010000002 pseudo 625931998 LOC116894054 olfactory receptor 51F2-like 2 102735917 102736867 + 22301074 116894054 MODEL JAAIVD010000001;XM_032895776 XP_032751667 protein-coding 625932001 LOC116889285 rhox homeobox family member 2-like X 103751141 103753244 + 22301074 116889285 MODEL JAAIVD010000014;XM_032890420 XP_032746311 protein-coding 625932009 LOC116887441 RT1 class I histocompatibility antigen, AA alpha chain-like 18 8664294 8667809 + 30032202 116887441 MODEL JAAIVD010000013;XM_032889055 XP_032744946 protein-coding 625932020 LOC116907270 inosine-5'-monophosphate dehydrogenase 2-like 8 15511226 15512223 + 116907270 MODEL JAAIVD010000027 pseudo 625932021 Il3ra interleukin 3 receptor subunit alpha ENCODES a protein that exhibits interleukin-3 binding (ortholog); interleukin-3 receptor activity (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); interleukin-3-mediated signaling pathway (ortholog); monocyte differentiation (ortholog); PARTICIPATES IN interleukin-3 signaling pathway; FOUND IN membrane (ortholog) 16 14905199 14910664 - 22301074 116885897 MODEL JAAIVD010000004;XM_032887216 XP_032743107 interleukin-3 receptor subunit alpha protein-coding 625932037 Nup93 nucleoporin 93 ENCODES a protein that exhibits structural constituent of nuclear pore (ortholog); INVOLVED IN nuclear envelope organization (ortholog); nuclear pore complex assembly (ortholog); positive regulation of SMAD protein signal transduction (ortholog); ASSOCIATED WITH focal segmental glomerulosclerosis (ortholog); genetic disease (ortholog); nephrotic syndrome (ortholog); FOUND IN centrosome (ortholog); nuclear envelope (ortholog); nuclear membrane (ortholog) 17 1119436 1222497 + 22301074;30032202 116886594 MODEL JAAIVD010000011;XM_032888116 XP_032744007 nuclear pore complex protein Nup93 protein-coding 625932063 Selenoh selenoprotein H ASSOCIATED WITH colorectal adenoma (ortholog); colorectal carcinoma (ortholog) 5 62050426 62051966 - 30032202 116901582 MODEL JAAIVD010000023;XM_032903595;XM_032903596 XP_032759486;XP_032759487 protein-coding 625932073 LOC116890805 histone-lysine N-methyltransferase KMT5B 2 3872295 3909047 - 22301074;30032202 116890805 MODEL JAAIVD010000001;XM_032891289 XP_032747180 protein-coding 625932086 LOC116894538 leukocyte immunoglobulin-like receptor subfamily B member 4 2 176514752 176520081 - 30032202 116894538 MODEL JAAIVD010000001;XM_032896241;XM_032896242;XM_032896243 XP_032752132;XP_032752133;XP_032752134 protein-coding 625932103 C10H2orf76 chromosome 10 C2orf76 homolog 10 12696984 12766958 + 116911227 MODEL JAAIVD010000005;XM_032915125;XM_032915126;XM_032915127;XM_032915128 XP_032771016;XP_032771017;XP_032771018;XP_032771019 UPF0538 protein C2orf76 homolog protein-coding 625932126 Man2b1 mannosidase alpha class 2B member 1 ENCODES a protein that exhibits alpha-mannosidase activity (ortholog); D-mannose binding (ortholog); INVOLVED IN glycoprotein catabolic process (ortholog); learning or memory (ortholog); mannose metabolic process (ortholog); ASSOCIATED WITH alpha-mannosidosis (ortholog); Craniosynostosis Syndrome, Autosomal Recessive (ortholog); genetic disease (ortholog); FOUND IN extracellular region (ortholog); lysosomal lumen (ortholog) 17 15189264 15208905 - 22301074;30032202 116886238 MODEL JAAIVD010000011;XM_032887646;XM_032887647;XM_032887648;XM_032887649 XP_032743537;XP_032743538;XP_032743539;XP_032743540 lysosomal alpha-mannosidase protein-coding 625932161 LOC116906102 poly(rC)-binding protein 2-like 7 75030075 75031030 + 116906102 MODEL JAAIVD010000026 pseudo 625932162 Dnajb7 DnaJ heat shock protein family (Hsp40) member B7 ENCODES a protein that exhibits protein-folding chaperone binding (ortholog) 1 251159546 251160835 - 30032202 116913961 MODEL JAAIVD010000025;XM_032918233 XP_032774124 dnaJ homolog subfamily B member 7 protein-coding 625932167 Pdia3 protein disulfide isomerase family A member 3 ENCODES a protein that exhibits identical protein binding (ortholog); lncRNA binding (ortholog); MHC class I protein binding (ortholog); INVOLVED IN cellular response to interleukin-7 (ortholog); cellular response to nonylphenol (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); asphyxia neonatorum (ortholog); autoimmune hepatitis (ortholog); FOUND IN acrosomal vesicle (ortholog); apical plasma membrane (ortholog); cell surface (ortholog) 5 99567550 99592299 + 22301074;30032202 116901863 MODEL JAAIVD010000023;XM_032904061 XP_032759952 protein disulfide-isomerase A3 protein-coding 625932184 LOC116885063 small nucleolar RNA SNORA17 15 73206486 73206607 + 116885063 MODEL JAAIVD010000010 pseudo 625932185 LOC116910939 histone-lysine N-methyltransferase SMYD3-like 10 75177601 75179894 - 116910939 MODEL JAAIVD010000005 pseudo 625932186 LOC116884904 importin subunit alpha-1-like 15 4140569 4145064 + 116884904 MODEL JAAIVD010000010 pseudo 625932187 LOC116889546 U6atac minor spliceosomal RNA X 81715021 81715124 + 116889546 MODEL JAAIVD010000014 pseudo 625932188 Tesk1 testis associated actin remodelling kinase 1 ENCODES a protein that exhibits protein kinase activity (ortholog); protein kinase binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN establishment of vesicle localization (ortholog); negative regulation of cilium assembly (ortholog); nuclear-transcribed mRNA catabolic process, no-go decay (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) 1 3050260 3056241 - 22301074;30032202 116891087 MODEL JAAIVD010000025;XM_032891805 XP_032747696 dual specificity testis-specific protein kinase 1 protein-coding 625932202 Prkcsh PRKCSH beta subunit of glucosidase II ENCODES a protein that exhibits calcium ion binding (ortholog); phosphoprotein binding (ortholog); protein kinase C binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); liver development (ortholog); N-glycan processing (ortholog); ASSOCIATED WITH genetic disease (ortholog); hepatitis B (ortholog); liver disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); glucosidase II complex (ortholog) 8 18253309 18264767 + 22301074;30032202 116908072 MODEL JAAIVD010000027;XM_032911345;XM_032911346 XP_032767236;XP_032767237 glucosidase 2 subunit beta;protein kinase C substrate 80K-H protein-coding 625932226 Tjp3 tight junction protein 3 INVOLVED IN regulation of G1/S transition of mitotic cell cycle (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); COVID-19 (ortholog); Prostatic Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); bicellular tight junction (ortholog); cell junction (ortholog) 1 153600396 153618800 + 22301074;30032202 116904430 MODEL JAAIVD010000025;XM_032907264;XM_032907268 XP_032763155;XP_032763159 tight junction protein ZO-3 protein-coding 625932254 LOC116886191 60S ribosomal protein L27-like 17 24926469 24927165 - 116886191 MODEL JAAIVD010000011 pseudo 625932255 Zfp64 ZFP64 zinc finger protein INVOLVED IN mesenchymal cell differentiation (ortholog); positive regulation of mRNA splicing, via spliceosome (ortholog); FOUND IN cytoplasm (ortholog); megasporocyte nucleus (ortholog); nucleus (ortholog) 5 148985102 149044425 + 116902296 MODEL JAAIVD010000023;XM_032904733 XP_032760624 zinc finger protein 64 protein-coding 625932268 LOC116891299 zinc finger protein 844-like 2 55039759 55048344 + 116891299 MODEL JAAIVD010000001 pseudo 625932269 Tmem185b transmembrane protein 185B 10 12111326 12113414 + 116911367 MODEL JAAIVD010000005;XM_032915296 XP_032771187 protein-coding 625932274 Bcl2l13 BCL2 like 13 INVOLVED IN apoptotic process (ortholog); ATP biosynthetic process (ortholog); canonical glycolysis (ortholog); FOUND IN membrane (ortholog); mitochondrion (ortholog) 6 25859713 25903232 - 22301074;30032202 116903324 MODEL JAAIVD010000024;XM_032905761;XM_032905763;XM_032905764;XM_032905765 XP_032761652;XP_032761654;XP_032761655;XP_032761656 bcl-2-like protein 13 protein-coding 625932293 Lingo4 leucine rich repeat and Ig domain containing 4 INVOLVED IN positive regulation of synapse assembly (ortholog); ASSOCIATED WITH polymicrogyria (ortholog) 3 62772733 62776950 - 22301074;30032202 116895414 MODEL JAAIVD010000012;XM_032896696 XP_032752587 leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4 protein-coding 625932298 Heg1 heart development protein with EGF like domains 1 INVOLVED IN cardiac atrium morphogenesis (ortholog); cardiac muscle tissue growth (ortholog); cell-cell junction organization (ortholog); FOUND IN cell surface (ortholog); cell-cell junction (ortholog); external side of plasma membrane (ortholog) 4 18476572 18557619 + 22301074;30032202 116898795 MODEL JAAIVD010000003;XM_032900146 XP_032756037 protein HEG homolog 1 protein-coding 625932317 LOC116886211 60S ribosomal protein L36-like 1 13623762 13624240 - 22301074;30032202 116886211 MODEL JAAIVD010000025;XM_032887604 XP_032743495 protein-coding 625932321 LOC116893081 CWF19-like protein 2 2 50815150 50822368 - 116893081 MODEL JAAIVD010000001 pseudo 625932322 Galk2 galactokinase 2 ENCODES a protein that exhibits galactokinase activity (ortholog) 5 104187980 104304452 + 22301074;30032202 116901910 MODEL JAAIVD010000023;XM_032904123;XM_032904124;XM_032904125 XP_032760014;XP_032760015;XP_032760016 N-acetylgalactosamine kinase protein-coding 625932342 LOC116897820 adenosylhomocysteinase-like 4 8176866 8178156 - 116897820 MODEL JAAIVD010000003 pseudo 625932343 Notum notum, palmitoleoyl-protein carboxylesterase ENCODES a protein that exhibits lipase activity (ortholog); palmitoleyl hydrolase activity (ortholog); protein-containing complex destabilizing activity (ortholog); INVOLVED IN bone development (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of Wnt signaling pathway (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog) 9 63362387 63368920 + 22301074;30032202 116910121 MODEL JAAIVD010000002;XM_032913955 XP_032769846 palmitoleoyl-protein carboxylesterase NOTUM protein-coding 625932358 Kif21a kinesin family member 21A ENCODES a protein that exhibits ankyrin repeat binding (ortholog); plus-end-directed microtubule motor activity (ortholog); INVOLVED IN anterograde axonal transport (ortholog); cortical microtubule organization (ortholog); regulation of axon guidance (ortholog); ASSOCIATED WITH aniridia (ortholog); congenital fibrosis of the extraocular muscles (ortholog); congenital fibrosis of the extraocular muscles 1 (ortholog); FOUND IN axonal growth cone (ortholog); presynapse (ortholog) 1 263931106 264046797 - 22301074;30032202 116884140 MODEL JAAIVD010000025;XM_032885321 XP_032741212 kinesin-like protein KIF21A protein-coding 625932400 Ier3ip1 immediate early response 3 interacting protein 1 INVOLVED IN brain development (ortholog); cell maturation (ortholog); chromatin organization (ortholog); ASSOCIATED WITH benign epilepsy with centrotemporal spikes (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN cytoplasmic vesicle (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 15 55123813 55133967 - 30032202 116884469 MODEL JAAIVD010000010;XM_032885579 XP_032741470 immediate early response 3-interacting protein 1 protein-coding 625932407 LOC116915139 small nucleolar RNA SNORA17 13 61770754 61770878 - 116915139 MODEL JAAIVD010000008 pseudo 625932408 LOC116895102 28S ribosomal RNA 2 155452233 155456756 + 116895102 MODEL JAAIVD010000001 pseudo 625932409 LOC116909039 40S ribosomal protein S3a-like 9 7849493 7850094 + 22301074;30032202 116909039 MODEL JAAIVD010000002;XM_032912520 XP_032768411 protein-coding 625932413 LOC116901046 uncharacterized LOC116901046 5 133318544 133330245 + 22301074 116901046 MODEL JAAIVD010000023;XM_032902628 XP_032758519 uncharacterized protein LOC116901046 protein-coding 625932425 Lbh LBH regulator of WNT signaling pathway INVOLVED IN mammary gland development (ortholog); mammary gland epithelial cell differentiation (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) 7 20290064 20313990 - 30032202 116905948 MODEL JAAIVD010000026;XM_032908945 XP_032764836 protein LBH protein-coding 625932432 LOC116897866 stefin-3-like 4 21131414 21139007 + 116897866 MODEL JAAIVD010000003 pseudo 625932433 LOC116884741 trafficking protein particle complex subunit 8-like 15 22185345 22198174 - 30032202 116884741 MODEL JAAIVD010000010;XM_032885959 XP_032741850 protein-coding 625932439 Numbl NUMB like endocytic adaptor protein INVOLVED IN adherens junction organization (ortholog); axonogenesis (ortholog); cytokine-mediated signaling pathway (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog) 2 168662317 168686998 - 116892436 MODEL JAAIVD010000001;XM_032894125 XP_032750016 numb-like protein protein-coding 625932453 LOC116908118 60S ribosomal protein L7-like 8 59060346 59061640 + 116908118 MODEL JAAIVD010000027 pseudo 625932454 Mxi1 MAX interactor 1, dimerization protein ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN blastocyst formation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH breast adenocarcinoma (ortholog); esophageal cancer (ortholog); kidney disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) 2 52760845 52801616 + 22301074;30032202 116891283 MODEL JAAIVD010000001;XM_032892187 XP_032748078 max-interacting protein 1 protein-coding 625932464 Art4 ADP-ribosyltransferase 4 (inactive) (Dombrock blood group) 6 12579005 12589561 + 22301074;30032202 116904534 MODEL JAAIVD010000024;XM_032907326 XP_032763217 ADP-ribosyltransferase 4 (Dombrock blood group);ecto-ADP-ribosyltransferase 4 protein-coding 625932471 Dennd4c DENN domain containing 4C ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); protein localization to plasma membrane (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); insulin-responsive compartment (ortholog) 1 67167909 67261295 - 22301074;30032202 116900482 MODEL JAAIVD010000025;XM_032902220 XP_032758111 DENN domain-containing protein 4C protein-coding 625932508 LOC116885915 charged multivesicular body protein 5-like 16 19488799 19489795 - 116885915 MODEL JAAIVD010000004 pseudo 625932509 LOC116902578 small nucleolar RNA SNORA17 5 138490697 138490828 + 116902578 MODEL JAAIVD010000023;XR_004388171 snorna 625932512 Cby2 chibby family member 2 ENCODES a protein that exhibits identical protein binding (ortholog); FOUND IN cytoplasmic vesicle (ortholog) 12 48796209 48811642 + 116913558 MODEL JAAIVD010000007;XM_032917766 XP_032773657 spermatid-associated protein protein-coding 625932519 Fam20c FAM20C golgi associated secretory pathway kinase ENCODES a protein that exhibits calcium ion binding (ortholog); manganese ion binding (ortholog); protease binding (ortholog); INVOLVED IN biomineral tissue development (ortholog); dentinogenesis (ortholog); enamel mineralization (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); COVID-19 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); Golgi apparatus (ortholog) 16 14388818 14446072 - 30032202 116885431 MODEL JAAIVD010000004;XM_032886717 XP_032742608 extracellular serine/threonine protein kinase FAM20C protein-coding 625932533 Mc5r melanocortin 5 receptor ENCODES a protein that exhibits corticotropin receptor activity (ortholog); hormone binding (ortholog); melanocortin receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); negative regulation of immune response (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphas family; melanocortin system pathway; ASSOCIATED WITH Acute-Phase Reaction (ortholog); FOUND IN plasma membrane (ortholog) 15 62932277 62937029 - 22301074;30032202 116884763 MODEL JAAIVD010000010;XM_032885979 XP_032741870 melanocortin receptor 5 protein-coding 625932540 Selenov selenoprotein V 2 167726322 167733054 + 30032202 116894472 MODEL JAAIVD010000001;XM_032896184;XR_004387027 XP_032752075 protein-coding 625932551 Larp7 La ribonucleoprotein 7, transcriptional regulator ENCODES a protein that exhibits 7SK snRNA binding (ortholog); U6 snRNA binding (ortholog); INVOLVED IN box C/D sno(s)RNA 3'-end processing (ortholog); germ cell proliferation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Alazami Syndrome (ortholog); Alazami-Yuan Syndrome (ortholog); generalized epilepsy (ortholog); FOUND IN 7SK snRNP (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 3 31794313 31809706 + 22301074;30032202 116896276 MODEL JAAIVD010000012;XM_032897357 XP_032753248 la-related protein 7 protein-coding 625932568 Sik2 salt inducible kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein serine kinase activity (ortholog); INVOLVED IN insulin receptor signaling pathway (ortholog); intracellular signal transduction (ortholog); negative regulation of transcription from RNA polymerase II promoter by glucose (ortholog); ASSOCIATED WITH Disease Progression (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); nucleus (ortholog) 8 45347285 45444070 - 22301074;30032202 116906791 MODEL JAAIVD010000027;XM_032909652;XM_032909654;XM_032909655;XM_032909656 XP_032765543;XP_032765545;XP_032765546;XP_032765547 serine/threonine-protein kinase SIK2 protein-coding 625932597 LOC116909934 uncharacterized LOC116909934 9 49505632 49510539 - 22301074;30032202 116909934 MODEL JAAIVD010000002;XM_032913704;XM_032913705;XM_032913706;XM_032913707;XM_032913708;XR_004389112 XP_032769595;XP_032769596;XP_032769597;XP_032769598;XP_032769599 uncharacterized protein LOC116909934 protein-coding 625932620 LOC116906466 small nucleolar RNA SNORA17 7 80317182 80317320 - 116906466 MODEL JAAIVD010000026 pseudo 625932621 LOC116892382 60S ribosomal protein L32-like 2 167251294 167251797 + 22301074;30032202 116892382 MODEL JAAIVD010000001;XM_032894046 XP_032749937 protein-coding 625932626 Epha3 EPH receptor A3 ENCODES a protein that exhibits ephrin receptor activity (ortholog); GPI-linked ephrin receptor activity (ortholog); growth factor binding (ortholog); INVOLVED IN cell migration (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); cellular response to interleukin-1 (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH atrial fibrillation (ortholog); Fever (ortholog); pancreatic cancer (ortholog); FOUND IN early endosome (ortholog); GABA-ergic synapse (ortholog); plasma membrane (ortholog) 4 78541273 78867160 + 22301074;30032202 116899058 MODEL JAAIVD010000003;XM_032900527;XM_032900528 XP_032756418;XP_032756419 ephrin type-A receptor 3 protein-coding 625932651 LOC116888637 protein max-like X 2674120 2674573 - 116888637 MODEL JAAIVD010000014 pseudo 625932652 LOC116887326 olfactory receptor 1361-like 18 10406694 10407626 + 22301074;30032202 116887326 MODEL JAAIVD010000013;XM_032888919 XP_032744810 protein-coding 625932655 LOC116902923 hyaluronidase PH-20 6 114527936 114538076 - 22301074;30032202 116902923 MODEL JAAIVD010000024;XM_032905247 XP_032761138 protein-coding 625932663 LOC116887353 olfactory receptor 14J1-like 18 10790468 10791433 + 22301074;30032202 116887353 MODEL JAAIVD010000013;XM_032888947 XP_032744838 protein-coding 625932666 LOC116895335 glyceraldehyde-3-phosphate dehydrogenase-like 3 37519528 37520472 - 116895335 MODEL JAAIVD010000012 pseudo 625932667 LOC116910731 small nucleolar RNA SNORA76 9 72621428 72621560 - 116910731 MODEL JAAIVD010000002;XR_004389249 snorna 625932670 LOC116901194 wee1-like protein kinase 2 1 121341521 121342199 + 116901194 MODEL JAAIVD010000025 pseudo 625932671 Gpat3 glycerol-3-phosphate acyltransferase 3 ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); glycerol-3-phosphate O-acyltransferase activity (ortholog); INVOLVED IN glycerol-3-phosphate metabolic process (ortholog); phospholipid biosynthetic process (ortholog); regulation of TOR signaling (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 11 11073944 11122859 + 30032202 116912583 MODEL JAAIVD010000006;XM_032916697 XP_032772588 protein-coding 625932687 LOC116886719 small nucleolar RNA SNORD43 17 42887007 42887070 + 116886719 MODEL JAAIVD010000011;XR_004386131 snorna 625932690 LOC116911648 alpha-enolase-like 10 36120420 36130059 - 116911648 MODEL JAAIVD010000005 pseudo 625932691 LOC116888881 eukaryotic translation initiation factor 4B-like X 84395013 84396976 + 116888881 MODEL JAAIVD010000014;XR_004386352 pseudo 625932694 Slc22a14 solute carrier family 22 member 14 ENCODES a protein that exhibits riboflavin transmembrane transporter activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); sperm capacitation (ortholog); FOUND IN mitochondrial inner membrane (ortholog); sperm principal piece (ortholog) 8 110411703 110432567 - 22301074 116907630 MODEL JAAIVD010000027;XM_032910690;XM_032910691 XP_032766581;XP_032766582 protein-coding 625932716 LOC116912417 uncharacterized LOC116912417 11 53926746 53946335 - 116912417 MODEL JAAIVD010000006;XR_004389459 ncrna 625932721 LOC116900167 taste receptor type 2 member 134 5 29427434 29428429 + 22301074;30032202 116900167 MODEL JAAIVD010000023;XM_032901928 XP_032757819 protein-coding 625932724 LOC116900150 voltage-dependent anion-selective channel protein 2-like 5 17179506 17180680 - 116900150 MODEL JAAIVD010000023 pseudo 625932725 Lrrc61 leucine rich repeat containing 61 6 92397827 92417412 - 22301074;30032202 116903856 MODEL JAAIVD010000024;XM_032906595 XP_032762486 leucine-rich repeat-containing protein 61 protein-coding 625932731 Mex3a mex-3 RNA binding family member A ENCODES a protein that exhibits RNA binding (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); P-body (ortholog) 3 65026433 65031471 - 22301074;30032202 116896684 MODEL JAAIVD010000012;XM_032898068 XP_032753959 RNA-binding protein MEX3A protein-coding 625932737 LOC116885921 heterogeneous nuclear ribonucleoprotein Q-like 16 24295157 24297601 - 116885921 MODEL JAAIVD010000004;XR_004386048 pseudo 625932741 LOC116906993 olfactory receptor 8B3-like 8 32282160 32283092 + 22301074;30032202 116906993 MODEL JAAIVD010000027;XM_032909920 XP_032765811 protein-coding 625932744 Snurf SNRPN upstream open reading frame ENCODES a protein that exhibits ATPase binding (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) 2 139950291 139968314 + 30032202 116892030 MODEL JAAIVD010000001;XM_032893488 XP_032749379 SNRPN upstream reading frame;SNRPN upstream reading frame protein protein-coding 625932753 Trnat-cgu transfer RNA threonine (anticodon CGU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 8500954 8501025 + 116910823 MODEL JAAIVD010000002 trna 625932754 LOC116889674 ribosome-recycling factor-like 30032202 116889674 MODEL JAAIVD010000048;XM_032890564 XP_032746455 protein-coding 625932755 LOC116897454 U6 spliceosomal RNA 3 64864758 64864867 + 116897454 MODEL JAAIVD010000012;XR_004387485 snrna 625932758 Pdcl3 phosducin like 3 ENCODES a protein that exhibits protein folding chaperone (ortholog); vascular endothelial growth factor receptor 2 binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); angiogenesis (ortholog); cellular response to heat (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 4 115193918 115203465 + 30032202 116899314 MODEL JAAIVD010000003;XM_032900980;XM_032900981 XP_032756871;XP_032756872 phosducin-like protein 3 protein-coding 625932771 Ggh gamma-glutamyl hydrolase ENCODES a protein that exhibits gamma-glutamyl-peptidase activity (ortholog); INVOLVED IN response to ethanol (ortholog); response to insulin (ortholog); response to xenobiotic stimulus (ortholog); PARTICIPATES IN folate cycle metabolic pathway; folate metabolic pathway; hereditary folate malabsorption pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Colorectal Neoplasms (ortholog); COVID-19 (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog) 1 122963764 122987103 - 30032202 116903001 MODEL JAAIVD010000025;XM_032905315 XP_032761206 protein-coding 625932784 LOC116894708 60S ribosomal protein L7a-like 2 227136891 227137695 - 116894708 MODEL JAAIVD010000001 pseudo 625932785 LOC116913553 dual specificity protein phosphatase 13 12 91525836 91528465 - 22301074;30032202 116913553 MODEL JAAIVD010000007;XM_032917761 XP_032773652 protein-coding 625932790 Prr9 proline rich 9 3 616674 617989 - 116896112 MODEL JAAIVD010000012;XM_032897076 XP_032752967 proline-rich protein 9 protein-coding 625932796 LOC116900854 olfactory receptor 5M11-like 5 63259953 63262044 + 22301074;30032202 116900854 MODEL JAAIVD010000023;XM_032902542 XP_032758433 protein-coding 625932800 LOC116900863 olfactory receptor 1052-like 5 64234176 64236948 - 116900863 MODEL JAAIVD010000023 pseudo 625932801 Slc4a1 solute carrier family 4 member 1 (Diego blood group) ENCODES a protein that exhibits actin binding (ortholog); ankyrin binding (ortholog); bicarbonate transmembrane transporter activity (ortholog); INVOLVED IN bicarbonate transport (ortholog); blood coagulation (ortholog); chloride transmembrane transport (ortholog); ASSOCIATED WITH acanthocytosis (ortholog); Alkalosis (ortholog); autoimmune hemolytic anemia (ortholog); FOUND IN ankyrin-1 complex (ortholog); basolateral plasma membrane (ortholog); cell surface (ortholog) 9 61646785 61658882 - 22301074;30032202 116909920 MODEL JAAIVD010000002;XM_032913683 XP_032769574 band 3 anion transport protein protein-coding 625932823 LOC116911848 small nucleolar RNA SNORA40 10 50465612 50465694 + 116911848 MODEL JAAIVD010000005 pseudo 625932824 LOC116893910 40S ribosomal protein S15a-like 2 77195330 77195772 - 116893910 MODEL JAAIVD010000001 pseudo 625932825 Padi6 peptidyl arginine deiminase 6 ENCODES a protein that exhibits identical protein binding (ortholog); protein-arginine deiminase activity (ortholog); structural constituent of cytoplasmic lattice (ortholog); INVOLVED IN cytoplasm organization (ortholog); cytoskeleton organization (ortholog); embryonic cleavage (ortholog); ASSOCIATED WITH genetic disease (ortholog); Oocyte/Zygote/Embryo Maturation Arrest 16 (ortholog); primary ovarian insufficiency (ortholog); FOUND IN cortical granule (ortholog); cytoplasm (ortholog); cytoplasmic lattice (ortholog) 1 17406567 17421097 + 22301074;30032202 116886489 MODEL JAAIVD010000025;XM_032887995 XP_032743886 protein-arginine deiminase type-6 protein-coding 625932844 LOC116895174 COMM domain-containing protein 6-like 3 88975497 88986834 + 116895174 MODEL JAAIVD010000012;XM_032896529 XP_032752420 protein-coding 625932848 LOC116888210 MLV-related proviral Env polyprotein-like X 127977065 127978566 - 116888210 MODEL JAAIVD010000014 pseudo 625932849 Rbm17 RNA binding motif protein 17 INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Spinocerebellar Ataxias (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) 14 17618080 17635544 - 22301074;30032202 116883617 MODEL JAAIVD010000009;XM_032884808;XM_032884809 XP_032740699;XP_032740700 splicing factor 45 protein-coding 625932868 LOC116910206 olfactory receptor 2V2-like 9 31592688 31593668 - 22301074 116910206 MODEL JAAIVD010000002;XM_032914071 XP_032769962 protein-coding 625932871 LOC116908751 uncharacterized LOC116908751 9 72788845 72790977 - 116908751 MODEL JAAIVD010000002;XR_004389018 ncrna 625932875 LOC116906516 U4 spliceosomal RNA 7 9954162 9954327 + 116906516 MODEL JAAIVD010000026 pseudo 625932876 Rfx4 regulatory factor X4 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cerebellar cortex morphogenesis (ortholog); cilium assembly (ortholog); dorsal spinal cord development (ortholog); FOUND IN nucleus (ortholog) 1 163536935 163693793 - 30032202 116907445 MODEL JAAIVD010000025;XM_032910419;XM_032910429 XP_032766310;XP_032766320 transcription factor RFX4 protein-coding 625932901 Lrrc47 leucine rich repeat containing 47 1 6696525 6706360 - 22301074;30032202 116892162 MODEL JAAIVD010000025;XM_032893662 XP_032749553 leucine-rich repeat-containing protein 47 protein-coding 625932912 LOC116913767 uncharacterized LOC116913767 12 13382252 13559261 + 116913767 MODEL JAAIVD010000007;XR_004389639 ncrna 625932918 Nudt1 nudix hydrolase 1 ENCODES a protein that exhibits 2-hydroxy-ATP hydrolase activity (ortholog); 2-hydroxy-dATP hydrolase activity (ortholog); 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity (ortholog); INVOLVED IN DNA protection (ortholog); male gonad development (ortholog); purine nucleoside catabolic process (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Cadmium Poisoning (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); cytosol (ortholog) 16 12857143 12863598 - 22301074;30032202 116885679 MODEL JAAIVD010000004;XM_032886986 XP_032742877 7,8-dihydro-8-oxoguanine triphosphatase protein-coding 625932926 LOC116886895 elongation factor 1-alpha 1-like 18 24267238 24268738 + 116886895 MODEL JAAIVD010000013 pseudo 625932927 LOC116907100 olfactory receptor 7G2-like 8 14343939 14344892 + 22301074;30032202 116907100 MODEL JAAIVD010000027;XM_032910068 XP_032765959 protein-coding 625932931 LOC116908923 olfactory receptor 1468 9 31681954 31682898 - 22301074;30032202 116908923 MODEL JAAIVD010000002;XM_032912381 XP_032768272 protein-coding 625932934 LOC116894573 vomeronasal type-2 receptor 116-like 2 178866969 178890133 + 22301074;30032202 116894573 MODEL JAAIVD010000001;XM_032896291;XM_032896292;XM_032896293 XP_032752182;XP_032752183;XP_032752184 protein-coding 625932947 Spp1 secreted phosphoprotein 1 ENCODES a protein that exhibits calcium ion binding (ortholog); extracellular matrix binding (ortholog); integrin binding (ortholog); INVOLVED IN androgen catabolic process (ortholog); bone mineralization (ortholog); calcium ion homeostasis (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; diabetic nephropathy pathway; fibroblast growth factor signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); adenocarcinoma (ortholog); Albuminuria (ortholog); FOUND IN apical part of cell (ortholog); cell projection (ortholog); cytoplasm (ortholog) 11 14489504 14495504 + 22301074;30032202 116912551 MODEL JAAIVD010000006;XM_032916651 XP_032772542 osteopontin protein-coding 625932958 LOC116890291 tissue-resident T-cell transcription regulator protein ZNF683-like 1 24186385 24188261 - 116890291 MODEL JAAIVD010000025;XM_032891002 XP_032746893 protein-coding 625932964 Ergic1 endoplasmic reticulum-golgi intermediate compartment 1 INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); Contracture (ortholog); neurogenic-type arthrogryposis multiplex congenita-2 (ortholog); FOUND IN endoplasmic reticulum-Golgi intermediate compartment (ortholog); nucleoplasm (ortholog) 9 4796332 4911342 - 30032202 116909184 MODEL JAAIVD010000002;XM_032912675 XP_032768566 endoplasmic reticulum-Golgi intermediate compartment protein 1 protein-coding 625932978 Aldh1a1 aldehyde dehydrogenase 1 family member A1 ENCODES a protein that exhibits 3-chloroallyl aldehyde dehydrogenase activity (ortholog); 3-deoxyglucosone dehydrogenase activity (ortholog); aldehyde dehydrogenase (NAD+) activity (ortholog); INVOLVED IN 9-cis-retinoic acid biosynthetic process (ortholog); 9-cis-retinoic acid metabolic process (ortholog); cellular detoxification of aldehyde (ortholog); PARTICIPATES IN cyclophosphamide pharmacodynamics pathway; cyclophosphamide pharmacokinetics pathway; ifosfamide pharmacodynamics pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Creutzfeldt-Jakob disease (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN axon (ortholog); cytosol (ortholog); synapse (ortholog) 2 20626239 20676233 + 30032202 116891024 MODEL JAAIVD010000001;XM_032891705 XP_032747596 retinal dehydrogenase 1 protein-coding 625932996 LOC116893262 presenilins-associated rhomboid-like protein, mitochondrial 2 138625010 138673328 + 22301074;30032202 116893262 MODEL JAAIVD010000001;XM_032895118 XP_032751009 protein-coding 625933003 LOC116898802 kxDL motif-containing protein 1-like 4 19614601 19615068 - 30032202 116898802 MODEL JAAIVD010000003;XM_032900152 XP_032756043 protein-coding 625933006 LOC116885260 cytochrome c oxidase subunit 7A2, mitochondrial-like 16 30025330 30026126 + 116885260 MODEL JAAIVD010000004 pseudo 625933007 LOC116888587 heat shock cognate 71 kDa protein-like X 77543548 77545472 + 116888587 MODEL JAAIVD010000014 pseudo 625933008 LOC116892739 zinc finger protein 471-like 2 179746181 179760715 - 30032202 116892739 MODEL JAAIVD010000001;XM_032894613 XP_032750504 protein-coding 625933016 Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 ENCODES a protein that exhibits eukaryotic translation initiation factor 2alpha kinase activity (ortholog); protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to cold (ortholog); cellular response to starvation (ortholog); ASSOCIATED WITH amino acid metabolic disorder (ortholog); genetic disease (ortholog); hair disease (ortholog); FOUND IN cytoplasm (ortholog) 5 96541024 96627722 + 22301074 116901777 MODEL JAAIVD010000023;XM_032903918 XP_032759809 eIF-2-alpha kinase GCN2 protein-coding 625933059 LOC116905106 Fanconi anemia group M protein homolog 7 78778628 78792213 + 22301074;30032202 116905106 MODEL JAAIVD010000026;XM_032907843 XP_032763734 protein-coding 625933066 LOC116884749 RNA-binding motif, single-stranded-interacting protein 2-like 15 34320176 34321184 + 116884749 MODEL JAAIVD010000010 pseudo 625933067 LOC116893498 sperm motility kinase Y-like 2 183271175 183292185 + 116893498 MODEL JAAIVD010000001 pseudo 625933068 LOC116899609 uncharacterized LOC116899609 4 159637191 159653934 - 116899609 MODEL JAAIVD010000003;XR_004387745 ncrna 625933073 Bend7 BEN domain containing 7 14 11064178 11145685 + 22301074 116883725 MODEL JAAIVD010000009;XM_032884955;XM_032884957;XM_032884958 XP_032740846;XP_032740848;XP_032740849 BEN domain-containing protein 7 protein-coding 625933091 Arl4c ARF like GTPase 4C ENCODES a protein that exhibits alpha-tubulin binding (ortholog); INVOLVED IN endocytic recycling (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 4 160731172 160739089 - 22301074;30032202 116899625 MODEL JAAIVD010000003;XM_032901588;XM_032901589 XP_032757479;XP_032757480 ADP ribosylation factor like GTPase 4C;ADP-ribosylation factor-like protein 4C protein-coding 625933100 LOC116885383 cytochrome P450 3A1-like 16 7943472 7976132 - 22301074;30032202 116885383 MODEL JAAIVD010000004;XM_032886662 XP_032742553 protein-coding 625933116 LOC116910974 heterogeneous nuclear ribonucleoprotein A1-like 10 89012658 89013774 - 116910974 MODEL JAAIVD010000005 pseudo 625933117 LOC116908453 small nucleolar RNA SNORD14 8 35404236 35404321 + 116908453 MODEL JAAIVD010000027;XR_004388971 snorna 625933120 LOC116901096 60S ribosomal protein L8-like 5 156435129 156443303 + 116901096 MODEL JAAIVD010000023 pseudo 625933121 Prr14l proline rich 14 like 11 71990639 72050930 + 116912886 MODEL JAAIVD010000006;XM_032917128;XM_032917129;XM_032917130;XM_032917131;XM_032917132;XM_032917133 XP_032773019;XP_032773020;XP_032773021;XP_032773022;XP_032773023;XP_032773024 protein PRR14L protein-coding 625933147 LOC116893287 serine/arginine-rich splicing factor 3-like 2 148137147 148137606 + 116893287 MODEL JAAIVD010000001 pseudo 625933148 LOC116897784 uncharacterized LOC116897784 4 3483036 3484950 + 116897784 MODEL JAAIVD010000003;XR_004387626 ncrna 625933152 LOC116886007 small nucleolar RNA SNORA17 16 35558621 35558750 - 116886007 MODEL JAAIVD010000004;XR_004386078 snorna 625933155 Spdl1 spindle apparatus coiled-coil protein 1 ENCODES a protein that exhibits enzyme binding (ortholog); kinetochore binding (ortholog); INVOLVED IN cell migration (ortholog); establishment of mitotic spindle orientation (ortholog); mitotic metaphase chromosome alignment (ortholog); ASSOCIATED WITH Perinatal Death (ortholog); FOUND IN nucleus (ortholog); outer kinetochore (ortholog); spindle pole (ortholog) 9 7483073 7505301 - 22301074;30032202 116909966 MODEL JAAIVD010000002;XM_032913741 XP_032769632 protein Spindly protein-coding 625933170 LOC116900696 40S ribosomal protein S10-like 5 131849889 131850364 + 116900696 MODEL JAAIVD010000023 pseudo 625933171 Drosha drosha ribonuclease III ENCODES a protein that exhibits DEAD/H-box RNA helicase binding (ortholog); lipopolysaccharide binding (ortholog); primary miRNA binding (ortholog); INVOLVED IN defense response to Gram-negative bacterium (ortholog); defense response to Gram-positive bacterium (ortholog); miRNA metabolic process (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH esophageal atresia (ortholog); hepatoblastoma (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN glutamatergic synapse (ortholog); microprocessor complex (ortholog); nucleoplasm (ortholog) 3 168154861 168263632 - 22301074;30032202 116897114 MODEL JAAIVD010000012;XM_032898756;XM_032898758 XP_032754647;XP_032754649 ribonuclease 3 protein-coding 625933210 LOC116910964 transcription factor 4-like 10 84942628 84944132 - 116910964 MODEL JAAIVD010000005 pseudo 625933211 LOC116907338 olfactory receptor 143-like 8 31973978 31974894 + 116907338 MODEL JAAIVD010000027 pseudo 625933212 LOC116894385 olfactory receptor 13A1-like 2 156805555 156806505 - 22301074 116894385 MODEL JAAIVD010000001;XM_032896091 XP_032751982 protein-coding 625933216 LOC116895205 voltage-dependent anion-selective channel protein 1-like 3 1893441 1983143 + 116895205 MODEL JAAIVD010000012 pseudo 625933217 LOC116910970 zinc finger protein 431-like 1 215243654 215258744 + 22301074 116910970 MODEL JAAIVD010000025;XM_032914690 XP_032770581 protein-coding 625933225 LOC116909348 angiotensin-converting enzyme 9 73121467 73141725 - 22301074;30032202 116909348 MODEL JAAIVD010000002;XM_032912897 XP_032768788 protein-coding 625933254 LOC116904151 ubiquitin-conjugating enzyme E2 variant 1-like 1 152913682 152914147 + 116904151 MODEL JAAIVD010000025 pseudo 625933255 LOC116915005 alpha-enolase-like 13 32061963 32066465 - 116915005 MODEL JAAIVD010000008 pseudo 625933256 LOC116885875 protein sidekick-1-like 16 11568482 11937494 - 30032202 116885875 MODEL JAAIVD010000004;XM_032887199 XP_032743090 protein-coding 625933264 Zdhhc14 zDHHC palmitoyltransferase 14 ENCODES a protein that exhibits palmitoyltransferase activity (ortholog); INVOLVED IN peptidyl-L-cysteine S-palmitoylation (ortholog); FOUND IN endoplasmic reticulum (ortholog) 2 193047653 193316042 - 30032202 116892858 MODEL JAAIVD010000001;XM_032894752;XM_032894754;XM_032894755 XP_032750643;XP_032750645;XP_032750646 probable palmitoyltransferase ZDHHC14;zinc finger DHHC-type palmitoyltransferase 14 protein-coding 625933285 LOC116884923 putative 60S ribosomal protein L37a-like protein 15 12120172 12130999 + 116884923 MODEL JAAIVD010000010 pseudo 625933286 LOC116894545 uncharacterized protein C19orf85-like 2 177484073 177490877 - 116894545 MODEL JAAIVD010000001;XM_032896253 XP_032752144 protein-coding 625933291 LOC116893038 jupiter microtubule associated homolog 2-like 2 229283438 229284658 + 116893038 MODEL JAAIVD010000001 pseudo 625933292 Top2b DNA topoisomerase II beta ENCODES a protein that exhibits chromatin binding (ortholog); DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity (ortholog); ribonucleoprotein complex binding (ortholog); INVOLVED IN axonogenesis (ortholog); B cell differentiation (ortholog); cellular response to ATP (ortholog); PARTICIPATES IN doxorubicin pharmacodynamics pathway; doxorubicin response pathway; etoposide pharmacodynamics pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); B-Cell Immunodeficiency, Distal Limb Anomalies, and Urogenital Malformations (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); heterochromatin (ortholog); nucleolus (ortholog) 12 85716248 85777056 + 22301074;30032202 116913833 MODEL JAAIVD010000007;XM_032918145 XP_032774036 DNA topoisomerase 2-beta protein-coding 625933332 Zbtb41 zinc finger and BTB domain containing 41 10 19784170 19813420 + 22301074;30032202 116911014 MODEL JAAIVD010000005;XM_032914742;XM_032914743;XM_032914744;XM_032914746 XP_032770633;XP_032770634;XP_032770635;XP_032770637 zinc finger and BTB domain-containing protein 41 protein-coding 625933356 Nrg1 neuregulin 1 ENCODES a protein that exhibits chemorepellent activity (ortholog); ErbB-2 class receptor binding (ortholog); ErbB-3 class receptor binding (ortholog); INVOLVED IN activation of protein kinase B activity (ortholog); cardiac conduction system development (ortholog); cardiac muscle cell apoptotic process (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; glypican signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Alzheimer's disease (ortholog); amblyopia (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); axon (ortholog) 13 54887582 55072895 + 22301074;30032202 116914548 MODEL JAAIVD010000008;XM_032918882;XM_032918883;XM_032918884;XM_032918885;XM_032918887;XM_032918888;XM_032918889;XM_032918890;XM_032918891;XM_032918892;XM_032918893;XM_032918894;XM_032918895;XM_032918896 XP_032774773;XP_032774774;XP_032774775;XP_032774776;XP_032774778;XP_032774779;XP_032774780;XP_032774781;XP_032774782;XP_032774783;XP_032774784;XP_032774785;XP_032774786;XP_032774787 pro-neuregulin-1, membrane-bound isoform protein-coding 625933398 Chic1 cysteine rich hydrophobic domain 1 ASSOCIATED WITH COVID-19 (ortholog); prostate cancer (ortholog) X 68413100 68455348 - 116888389 MODEL JAAIVD010000014;XM_032889663 XP_032745554 cysteine-rich hydrophobic domain-containing protein 1 protein-coding 625933408 Brsk2 BR serine/threonine kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); ATPase binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); axonogenesis (ortholog); ERAD pathway (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 11 (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); distal axon (ortholog) 2 7518917 7571635 - 22301074;30032202 116890852 MODEL JAAIVD010000001;XM_032891401;XM_032891402;XM_032891403;XM_032891404;XM_032891405;XM_032891407;XM_032891408;XM_032891409;XM_032891410;XM_032891411;XM_032891412;XM_032891413;XM_032891414;XM_032891415;XM_032891416;XR_004386788;XR_004386789 XP_032747292;XP_032747293;XP_032747294;XP_032747295;XP_032747296;XP_032747298;XP_032747299;XP_032747300;XP_032747301;XP_032747302;XP_032747303;XP_032747304;XP_032747305;XP_032747306;XP_032747307 serine/threonine-protein kinase BRSK2 protein-coding 625933465 Trnai-gau transfer RNA isoleucine (anticodon GAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889686 MODEL JAAIVD010000051 trna 625933466 LOC116894155 olfactory receptor 2D3-like 2 104894629 104895555 - 22301074 116894155 MODEL JAAIVD010000001;XM_032895872 XP_032751763 protein-coding 625933469 G0s2 G0/G1 switch 2 INVOLVED IN extrinsic apoptotic signaling pathway (ortholog); positive regulation of cold-induced thermogenesis (ortholog); positive regulation of extrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); COVID-19 (ortholog); FOUND IN mitochondrion (ortholog) 10 71259255 71260200 - 30032202 116911168 MODEL JAAIVD010000005;XM_032915030 XP_032770921 G0/G1 switch protein 2 protein-coding 625933475 Glo1 glyoxalase I ENCODES a protein that exhibits lactoylglutathione lyase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN glutathione metabolic process (ortholog); methylglyoxal metabolic process (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN glyoxalase metabolic pathway; Leigh disease pathway; primary hyperoxaluria type 2 pathway; ASSOCIATED WITH anxiety disorder (ortholog); autistic disorder (ortholog); depressive disorder (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 18 3267002 3287125 + 22301074 116887200 MODEL JAAIVD010000013;XM_032888756 XP_032744647 lactoylglutathione lyase protein-coding 625933485 Resp18 regulated endocrine specific protein 18 INVOLVED IN in utero embryonic development (ortholog); ASSOCIATED WITH hypertension (ortholog); renal fibrosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); perikaryon (ortholog); rough endoplasmic reticulum lumen (ortholog) 4 148627434 148634111 - 30032202 116899530 MODEL JAAIVD010000003;XM_032901400 XP_032757291 regulated endocrine-specific protein 18 protein-coding 625933495 LOC116911635 contactin-associated protein like 5-1 10 77335566 78246434 - 116911635 MODEL JAAIVD010000005;XM_032915594 XP_032771485 protein-coding 625933524 LOC116903902 phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 2 protein-like 1 145886401 145959409 + 30032202 116903902 MODEL JAAIVD010000025;XM_032906673 XP_032762564 protein-coding 625933535 Acadm acyl-CoA dehydrogenase medium chain ENCODES a protein that exhibits acyl-CoA dehydrogenase activity (ortholog); flavin adenine dinucleotide binding (ortholog); identical protein binding (ortholog); INVOLVED IN cardiac muscle cell differentiation (ortholog); carnitine biosynthetic process (ortholog); carnitine metabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH Congenital Hydrocephalus 2, with or without Brain or Eye Anomalies (ortholog); genetic disease (ortholog); Liver Failure (ortholog); FOUND IN axon (ortholog); mitochondrial matrix (ortholog); mitochondrial membrane (ortholog) 3 7699251 7723798 + 22301074;30032202 116896143 MODEL JAAIVD010000012;XM_032897127 XP_032753018 medium-chain specific acyl-CoA dehydrogenase, mitochondrial protein-coding 625933551 LOC116906422 small nucleolar RNA SNORA21 7 37828854 37828982 + 116906422 MODEL JAAIVD010000026;XR_004388684 snorna 625933554 Tfdp1 transcription factor Dp-1 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN anoikis (ortholog); epidermis development (ortholog); negative regulation of fat cell proliferation (ortholog); ASSOCIATED WITH mismatch repair cancer syndrome (ortholog); systemic juvenile rheumatoid arthritis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) 13 70328528 70366935 - 22301074;30032202 116914403 MODEL JAAIVD010000008;XM_032918633;XM_032918635;XM_032918636;XM_032918637;XM_032918638;XM_032918639;XM_032918640;XM_032918641 XP_032774524;XP_032774526;XP_032774527;XP_032774528;XP_032774529;XP_032774530;XP_032774531;XP_032774532 protein-coding 625933594 F9 coagulation factor IX ENCODES a protein that exhibits calcium ion binding (ortholog); endopeptidase activity (ortholog); metal ion binding (ortholog); INVOLVED IN blood coagulation (ortholog); blood coagulation, intrinsic pathway (ortholog); proteolysis (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH autosomal hemophilia A (ortholog); blood coagulation disease (ortholog); factor VIII deficiency (ortholog); FOUND IN extracellular region (ortholog); membrane (ortholog) X 119094482 119123402 + 22301074;30032202 116888583 MODEL JAAIVD010000014;XM_032889882;XM_032889883 XP_032745773;XP_032745774 protein-coding 625933608 LOC116886554 uncharacterized LOC116886554 17 16094120 16101420 + 116886554 MODEL JAAIVD010000011;XR_004386113;XR_004386114 ncrna 625933616 LOC116910260 nuclear envelope pore membrane protein POM 121-like 9 32201655 32203898 - 116910260 MODEL JAAIVD010000002;XM_032914145 XP_032770036 protein-coding 625933619 Znf644 zinc finger protein 644 ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); transcription corepressor binding (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Myopia 21, Autosomal Dominant (ortholog) 11 16334694 16412913 - 30032202 116912840 MODEL JAAIVD010000006;XM_032917034;XM_032917036;XM_032917037;XM_032917038;XM_032917039;XM_032917040;XM_032917041;XM_032917042;XM_032917043;XM_032917044;XM_032917045 XP_032772925;XP_032772927;XP_032772928;XP_032772929;XP_032772930;XP_032772931;XP_032772932;XP_032772933;XP_032772934;XP_032772935;XP_032772936 protein-coding 625933659 LOC116895762 39S ribosomal protein L30, mitochondrial-like 3 45809909 45810867 + 116895762 MODEL JAAIVD010000012 pseudo 625933660 LOC116891421 PRAME family member 12-like 1 52738145 52740828 + 116891421 MODEL JAAIVD010000025 pseudo 625933661 LOC116899735 U2 spliceosomal RNA 4 532843 532970 + 116899735 MODEL JAAIVD010000003 pseudo 625933662 Myo1f myosin IF INVOLVED IN defense response to Gram-positive bacterium (ortholog); negative regulation of cell adhesion (ortholog); neutrophil degranulation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); sensorineural hearing loss (ortholog); FOUND IN cortical actin cytoskeleton (ortholog); cytosol (ortholog); filamentous actin (ortholog) 1 158783124 158834709 - 22301074;30032202 116907145 MODEL JAAIVD010000025;XM_032910113 XP_032766004 unconventional myosin-If protein-coding 625933694 Ccnj cyclin J 2 39959525 39977803 + 30032202 116891154 MODEL JAAIVD010000001;XM_032891943;XM_032891944;XM_032891945;XM_032891946;XM_032891947 XP_032747834;XP_032747835;XP_032747836;XP_032747837;XP_032747838 cyclin-J protein-coding 625933714 Naxd NAD(P)HX dehydratase ENCODES a protein that exhibits ATP-dependent NAD(P)H-hydrate dehydratase activity (ortholog); INVOLVED IN metabolite repair (ortholog); ASSOCIATED WITH Disease Progression (ortholog); Early-Onset Progressive Encephalopathy with Brain Edema and/or Leukoencephalopathy 2 (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); mitochondrion (ortholog) 13 72346355 72364388 - 30032202 116914280 MODEL JAAIVD010000008;XM_032918502;XM_032918503 XP_032774393;XP_032774394 ATP-dependent (S)-NAD(P)H-hydrate dehydratase protein-coding 625933731 Tnfrsf18 TNF receptor superfamily member 18 INVOLVED IN positive regulation of cell adhesion (ortholog); positive regulation of leukocyte migration (ortholog); positive regulation of tyrosine phosphorylation of STAT protein (ortholog); ASSOCIATED WITH anogenital venereal wart (ortholog); HTLV-1-associated myelopathy/tropical spastic paraparesis (ortholog); leishmaniasis (ortholog); FOUND IN external side of plasma membrane (ortholog) 1 4625343 4627966 - 22301074;30032202 116891677 MODEL JAAIVD010000025;XM_032892937 XP_032748828 tumor necrosis factor receptor superfamily member 18 protein-coding 625933740 LOC116895120 U4 spliceosomal RNA 2 67340258 67340420 + 116895120 MODEL JAAIVD010000001 pseudo 625933741 LOC116885241 uncharacterized LOC116885241 16 29044402 29068403 - 116885241 MODEL JAAIVD010000004;XR_004385998 ncrna 625933747 Bbs10 Bardet-Biedl syndrome 10 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN chaperone-mediated protein complex assembly (ortholog); cone retinal bipolar cell differentiation (ortholog); DNA damage response (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl syndrome 10 (ortholog) 1 189469378 189472497 + 22301074;30032202 116908879 MODEL JAAIVD010000025;XM_032912326 XP_032768217 Bardet-Biedl syndrome 10 protein protein-coding 625933753 LOC116895627 60S ribosomal protein L31-like 3 173011818 173012192 + 116895627 MODEL JAAIVD010000012 pseudo 625933754 Rapgef3 Rap guanine nucleotide exchange factor 3 ENCODES a protein that exhibits cAMP binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN artery development (ortholog); associative learning (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN adenosine signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); amyloidosis (ortholog); Arterial Injury (ortholog); FOUND IN apical part of cell (ortholog); axon terminus (ortholog); basal plasma membrane (ortholog) 1 270559170 270581161 - 22301074;30032202 116884539 MODEL JAAIVD010000025;XM_032885678 XP_032741569 protein-coding 625933785 Trnan-guu transfer RNA asparagine (anticodon GUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60839413 60839486 - 116897684 MODEL JAAIVD010000012 trna 625933786 Evx1 even-skipped homeobox 1 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN embryo development ending in birth or egg hatching (ortholog); interneuron migration (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN axon (ortholog); cell body (ortholog) 6 88744112 88747472 - 22301074;30032202 116902829 MODEL JAAIVD010000024;XM_032905162 XP_032761053 homeobox even-skipped homolog protein 1 protein-coding 625933792 Slc51a solute carrier family 51 member A ENCODES a protein that exhibits bile acid transmembrane transporter activity (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); bile acid secretion (ortholog); ASSOCIATED WITH cholestasis (ortholog); cognitive disorder (ortholog); Diabetes Complications (ortholog); FOUND IN basolateral plasma membrane (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) 4 17283983 17297951 - 30032202 116898777 MODEL JAAIVD010000003;XM_032900114 XP_032756005 organic solute transporter subunit alpha;solute carrier family 51 subunit alpha protein-coding 625933805 LOC116912962 small Cajal body-specific RNA 4 11 5280580 5280709 + 116912962 MODEL JAAIVD010000006;XR_004389529 ncrna 625933808 Fbl fibrillarin rRNA 2'-O-methyltransferase ENCODES a protein that exhibits ATPase binding (ortholog); histone H2AQ104 methyltransferase activity (ortholog); RNA binding (ortholog); INVOLVED IN ribosomal small subunit biogenesis (ortholog); rRNA methylation (ortholog); sno(s)RNA metabolic process (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Animal Disease Models (ortholog); autoimmune disease (ortholog); Breast Neoplasms (ortholog); FOUND IN Cajal body (ortholog); chromosome (ortholog); dense fibrillar component (ortholog) 2 167802409 167811525 - 22301074;30032202 116892404 MODEL JAAIVD010000001;XM_032894082 XP_032749973 fibrillarin;rRNA 2'-O-methyltransferase fibrillarin APPROVED protein-coding 625933820 LOC116893218 olfactory receptor 5A2-like 2 114629596 114631053 - 116893218 MODEL JAAIVD010000001 pseudo 625933821 Itih4 inter-alpha-trypsin inhibitor heavy chain 4 INVOLVED IN acute-phase response (ortholog); response to cytokine (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Bacteremia (ortholog); Chronic Hepatitis B (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); plasma membrane (ortholog) 13 6590140 6605499 + 116914275 MODEL JAAIVD010000008;XM_032918498 XP_032774389 inter-alpha-trypsin inhibitor heavy chain H4 protein-coding 625933848 Dusp2 dual specificity phosphatase 2 ENCODES a protein that exhibits mitogen-activated protein kinase binding (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN protein dephosphorylation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); systemic juvenile rheumatoid arthritis (ortholog); FOUND IN nuclear membrane (ortholog); nucleoplasm (ortholog) 5 106119404 106121724 + 22301074;30032202 116900617 MODEL JAAIVD010000023;XM_032902336 XP_032758227 dual specificity protein phosphatase 2 protein-coding 625933856 LOC116893024 eukaryotic initiation factor 4A-I-like 2 226770081 226771292 - 116893024 MODEL JAAIVD010000001 pseudo 625933857 LOC116890075 olfactory receptor 6C2-like 1 215122369 215123307 - 22301074;30032202 116890075 MODEL JAAIVD010000025;XM_032890838 XP_032746729 protein-coding 625933860 LOC116889890 60S acidic ribosomal protein P1-like 1 158662711 158663067 - 22301074;30032202 116889890 MODEL JAAIVD010000025;XM_032890714;XM_032890715 XP_032746605;XP_032746606 protein-coding 625933867 Arhgap9 Rho GTPase activating protein 9 ENCODES a protein that exhibits GTPase activator activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); ASSOCIATED WITH coronary artery vasospasm (ortholog); Experimental Liver Cirrhosis (ortholog) 1 205757271 205765281 + 22301074;30032202 116910034 MODEL JAAIVD010000025;XM_032913824;XM_032913831 XP_032769715;XP_032769722 rho GTPase-activating protein 9 protein-coding 625933891 LOC116893478 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1-like 2 180662981 180670102 - 116893478 MODEL JAAIVD010000001 pseudo 625933892 Zswim2 zinc finger SWIM-type containing 2 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN positive regulation of extrinsic apoptotic signaling pathway via death domain receptors (ortholog); protein polyubiquitination (ortholog) 5 61354431 61376640 - 22301074;30032202 116900222 MODEL JAAIVD010000023;XM_032901975 XP_032757866 E3 ubiquitin-protein ligase ZSWIM2 protein-coding 625933904 Kera keratocan INVOLVED IN cornea development in camera-type eye (ortholog); ASSOCIATED WITH arcus senilis (ortholog); cornea plana (ortholog); Cornea Plana 2 (ortholog) 1 176795652 176806583 + 22301074;30032202 116913321 MODEL JAAIVD010000025;XM_032917500 XP_032773391 protein-coding 625933910 LOC116897949 olfactory receptor 187-like 4 43105815 43106747 + 22301074;30032202 116897949 MODEL JAAIVD010000003;XM_032899349 XP_032755240 protein-coding 625933914 Trnap-agg transfer RNA proline (anticodon AGG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 1 29781665 29781737 - 116890641 MODEL JAAIVD010000025 trna 625933915 LOC116892098 serum amyloid A-3 protein 2 152662200 152665684 + 22301074 116892098 MODEL JAAIVD010000001;XM_032893575 XP_032749466 protein-coding 625933923 Gfod2 Gfo/Idh/MocA-like oxidoreductase domain containing 2 INVOLVED IN extracellular matrix organization (ortholog); FOUND IN extracellular matrix (ortholog) 17 25450031 25462933 - 22301074;30032202 116886290 MODEL JAAIVD010000011;XM_032887722;XM_032887723 XP_032743613;XP_032743614 glucose-fructose oxidoreductase domain containing 2;glucose-fructose oxidoreductase domain-containing protein 2 protein-coding 625933934 LOC116888715 small nuclear ribonucleoprotein E X 115850695 115851136 - 22301074;30032202 116888715 MODEL JAAIVD010000014;XM_032890001 XP_032745892 protein-coding 625933939 LOC116895736 zinc finger protein 844-like 3 28600642 28601307 + 116895736 MODEL JAAIVD010000012 pseudo 625933940 LOC116890497 small nucleolar RNA SNORA48 1 181779105 181779248 + 116890497 MODEL JAAIVD010000025;XR_004386683 snorna 625933943 Lin9 lin-9 DREAM MuvB core complex component FOUND IN nucleoplasm (ortholog) 10 58969345 59013944 + 30032202 116911419 MODEL JAAIVD010000005;XM_032915381;XM_032915382;XM_032915383;XM_032915384 XP_032771272;XP_032771273;XP_032771274;XP_032771275 protein lin-9 homolog protein-coding 625933972 LOC116906936 high mobility group nucleosome-binding domain-containing protein 5-like 8 111120914 111121869 + 22301074;30032202 116906936 MODEL JAAIVD010000027;XM_032909860 XP_032765751 protein-coding 625933977 LOC116883454 elongation factor 1-alpha 1-like 14 46373288 46374681 - 116883454 MODEL JAAIVD010000009 pseudo 625933978 LOC116883807 uncharacterized LOC116883807 14 78501434 78506188 + 116883807 MODEL JAAIVD010000009;XR_004385791 ncrna 625933982 LOC116885083 U6 spliceosomal RNA 15 27565722 27565826 + 116885083 MODEL JAAIVD010000010;XR_004385956 snrna 625933985 LOC116892916 protein SOGA3 2 203617059 203627286 - 22301074 116892916 MODEL JAAIVD010000001;XM_032894842;XM_032894843 XP_032750733;XP_032750734 protein-coding 625933998 LOC116888827 SEC23-interacting protein-like X 79316960 79320320 + 22301074;30032202 116888827 MODEL JAAIVD010000014;XM_032890103 XP_032745994 protein-coding 625934002 LOC116892417 zinc finger protein 60-like 2 168173606 168184416 - 30032202 116892417 MODEL JAAIVD010000001;XM_032894098 XP_032749989 protein-coding 625934008 Fam76a family with sequence similarity 76 member A FOUND IN nucleoplasm (ortholog) 1 25313395 25340928 + 116895358 MODEL JAAIVD010000025;XM_032896659 XP_032752550 protein FAM76A protein-coding 625934021 Bap1 BRCA1 associated deubiquitinase 1 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); cysteine-type deubiquitinase activity (ortholog); INVOLVED IN cell population proliferation (ortholog); common myeloid progenitor cell proliferation (ortholog); erythrocyte differentiation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH adrenocortical carcinoma (ortholog); basal cell carcinoma (ortholog); Bone Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 13 6954481 6963034 + 22301074;30032202 116914239 MODEL JAAIVD010000008;XM_032918447 XP_032774338 BRCA1 associated protein 1;ubiquitin carboxyl-terminal hydrolase BAP1 protein-coding 625934042 LOC116888724 putative P2Y purinoceptor 10 X 64548234 64570189 - 22301074;30032202 116888724 MODEL JAAIVD010000014;XM_032890015 XP_032745906 protein-coding 625934048 LOC116889734 S-adenosylmethionine synthase-like 22301074;30032202 116889734 MODEL JAAIVD010000068;XM_032890607 XP_032746498 protein-coding 625934049 Pianp PILR alpha associated neural protein ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN cerebellum development (ortholog); dentate gyrus development (ortholog); gamma-aminobutyric acid signaling pathway (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN basolateral plasma membrane (ortholog); presynapse (ortholog) 6 22892488 22898646 - 30032202 116903266 MODEL JAAIVD010000024;XM_032905676 XP_032761567 PILR alpha-associated neural protein protein-coding 625934059 LOC116883571 histone H2B type 1-C/E/F/G/I 14 42566042 42566446 - 22301074;30032202 116883571 MODEL JAAIVD010000009;XM_032884753 XP_032740644 protein-coding 625934063 Ccdc60 coiled-coil domain containing 60 16 37545818 37703992 + 116885510 MODEL JAAIVD010000004;XM_032886802;XM_032886803 XP_032742693;XP_032742694 coiled-coil domain-containing protein 60 protein-coding 625934087 LOC116900414 olfactory receptor 4C16-like 5 70317868 70318790 - 116900414 MODEL JAAIVD010000023 pseudo 625934088 LOC116897459 small nucleolar RNA SNORA71 3 50220257 50220388 - 116897459 MODEL JAAIVD010000012;XR_004387489 snorna 625934091 Itm2c integral membrane protein 2C ENCODES a protein that exhibits amyloid-beta binding (ortholog); ATP binding (ortholog); INVOLVED IN negative regulation of neuron projection development (ortholog); neuron differentiation (ortholog); positive regulation of extrinsic apoptotic signaling pathway (ortholog); FOUND IN Golgi apparatus (ortholog); lysosome (ortholog); perinuclear region of cytoplasm (ortholog) 4 158036517 158050220 + 30032202 116899584 MODEL JAAIVD010000003;XM_032901523 XP_032757414 protein-coding 625934101 Pmpca peptidase, mitochondrial processing subunit alpha ENCODES a protein that exhibits endopeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN protein processing (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 2 (ortholog); cerebellar ataxia (ortholog); genetic disease (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 5 10691511 10700976 - 22301074;30032202 116901270 MODEL JAAIVD010000023;XM_032903034;XM_032903035 XP_032758925;XP_032758926 mitochondrial-processing peptidase subunit alpha protein-coding 625934121 Emc6 ER membrane protein complex subunit 6 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); FOUND IN EMC complex (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) 9 42335560 42336426 + 30032202 116908902 MODEL JAAIVD010000002;XM_032912357 XP_032768248 protein-coding 625934127 Asmt acetylserotonin O-methyltransferase ENCODES a protein that exhibits acetylserotonin O-methyltransferase activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN melatonin biosynthetic process (ortholog); negative regulation of male gonad development (ortholog); PARTICIPATES IN methionine cycle/metabolic pathway; tryptophan metabolic pathway; ASSOCIATED WITH autistic disorder (ortholog); Wilson disease (ortholog) 16 14891895 14897203 - 30032202 116885896 MODEL JAAIVD010000004;XM_032887215 XP_032743106 protein-coding 625934139 Fnbp1 formin binding protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN nervous system development (ortholog); FOUND IN plasma membrane (ortholog) 5 4484881 4599148 + 22301074 116901168 MODEL JAAIVD010000023;XM_032902816;XM_032902817;XM_032902818;XM_032902819;XM_032902820;XM_032902821;XM_032902822;XM_032902823;XM_032902824;XM_032902825;XM_032902826 XP_032758707;XP_032758708;XP_032758709;XP_032758710;XP_032758711;XP_032758712;XP_032758713;XP_032758714;XP_032758715;XP_032758716;XP_032758717 formin-binding protein 1 protein-coding 625934176 LOC116895539 TD and POZ domain-containing protein 5-like 3 120852603 120859293 - 30032202 116895539 MODEL JAAIVD010000012;XM_032896782;XR_004387283 XP_032752673 protein-coding 625934186 Nt5c 5', 3'-nucleotidase, cytosolic ENCODES a protein that exhibits 5'-nucleotidase activity (ortholog); identical protein binding (ortholog); nucleotidase activity (ortholog); INVOLVED IN dAMP catabolic process (ortholog); dCMP catabolic process (ortholog); deoxyribonucleotide catabolic process (ortholog); PARTICIPATES IN gemcitabine pharmacodynamics pathway; gemcitabine pharmacokinetics pathway; lamivudine pharmacokinetics pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 9 68599188 68601202 + 22301074;30032202 116909646 MODEL JAAIVD010000002;XM_032913294 XP_032769185 5'(3')-deoxyribonucleotidase, cytosolic type protein-coding 625934195 Cmtm3 CKLF like MARVEL transmembrane domain containing 3 INVOLVED IN blastocyst hatching (ortholog); positive regulation of B cell receptor signaling pathway (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) 17 12624735 12631729 + 22301074 116886672 MODEL JAAIVD010000011;XM_032888164 XP_032744055 CKLF-like MARVEL transmembrane domain-containing protein 3 protein-coding 625934204 Cd180 CD180 molecule ENCODES a protein that exhibits lipopolysaccharide immune receptor activity (ortholog); INVOLVED IN B cell proliferation (ortholog); B cell proliferation involved in immune response (ortholog); cellular response to lipopolysaccharide (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN plasma membrane (ortholog) 3 194577609 194589645 - 22301074;30032202 116895666 MODEL JAAIVD010000012;XM_032896872 XP_032752763 CD180 antigen protein-coding 625934211 LOC116899335 uncharacterized LOC116899335 4 118803947 118848728 - 116899335 MODEL JAAIVD010000003;XR_004387709;XR_004387710;XR_004387711;XR_004387712;XR_004387713;XR_004387714;XR_004387715;XR_004387716;XR_004387717 ncrna 625934236 LOC116885110 small nucleolar RNA SNORD63 15 9422533 9422600 + 116885110 MODEL JAAIVD010000010;XR_004385975 snorna 625934239 LOC116914354 beta-defensin 15-like 13 64563682 64566317 + 22301074 116914354 MODEL JAAIVD010000008;XM_032918568 XP_032774459 protein-coding 625934243 Fam124b family with sequence similarity 124 member B FOUND IN nucleoplasm (ortholog) 4 153226260 153242252 - 30032202 116898241 MODEL JAAIVD010000003;XM_032899592 XP_032755483 protein FAM124B protein-coding 625934247 LOC116912114 solute carrier family 25 member 51-like 11 22186111 22188035 + 116912114 MODEL JAAIVD010000006;XM_032916018 XP_032771909 protein-coding 625934252 Znf366 zinc finger protein 366 ENCODES a protein that exhibits nuclear estrogen receptor binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN negative regulation of intracellular estrogen receptor signaling pathway (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); response to estrogen (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); COVID-19 (ortholog); DiGeorge syndrome (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 3 197330711 197350428 - 30032202 116895672 MODEL JAAIVD010000012;XM_032896876 XP_032752767 protein-coding 625934259 LOC116895247 olfactory receptor 149-like 3 60661 61596 + 22301074 116895247 MODEL JAAIVD010000012;XM_032896567 XP_032752458 protein-coding 625934262 Mier2 MIER family member 2 ENCODES a protein that exhibits histone deacetylase activity (ortholog); histone deacetylase binding (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Salivary Gland Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) 1 155319174 155334896 + 30032202 116905785 MODEL JAAIVD010000025;XM_032908764 XP_032764655 mesoderm induction early response protein 2 protein-coding 625934280 LOC116909589 uncharacterized LOC116909589 9 66529100 66562460 + 116909589 MODEL JAAIVD010000002;XR_004389083 ncrna 625934285 Slc8a1 solute carrier family 8 member A1 ENCODES a protein that exhibits ankyrin binding (ortholog); calcium ion binding (ortholog); calcium:monoatomic cation antiporter activity involved in regulation of postsynaptic cytosolic calcium ion concentration (ortholog); INVOLVED IN calcium ion export (ortholog); calcium ion homeostasis (ortholog); calcium ion import (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); brain ischemia (ortholog); Cardiomegaly (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); basolateral plasma membrane (ortholog) 7 11343528 11680513 + 22301074;30032202 116905831 MODEL JAAIVD010000026;XM_032908797;XM_032908798;XM_032908799;XM_032908800;XM_032908801;XM_032908802;XM_032908803;XM_032908804;XM_032908805;XM_032908807;XM_032908808 XP_032764688;XP_032764689;XP_032764690;XP_032764691;XP_032764692;XP_032764693;XP_032764694;XP_032764695;XP_032764696;XP_032764698;XP_032764699 sodium/calcium exchanger 1 protein-coding 625934320 LOC116907444 small nuclear ribonucleoprotein G 8 60051641 60052029 + 22301074;30032202 116907444 MODEL JAAIVD010000027;XM_032910416 XP_032766307 protein-coding 625934325 LOC116912284 NACHT and WD repeat domain-containing protein 2-like 11 20678115 20777848 + 116912284 MODEL JAAIVD010000006;XM_032916279 XP_032772170 protein-coding 625934332 Fip1l1 factor interacting with PAPOLA and CPSF1 INVOLVED IN mRNA 3'-end processing (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; ASSOCIATED WITH congestive heart failure (ortholog); Eosinophilia (ortholog); hypereosinophilic syndrome (ortholog); FOUND IN mRNA cleavage and polyadenylation specificity factor complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 11 31308878 31369541 + 30032202 116912074 MODEL JAAIVD010000006;XM_032915942;XM_032915943;XM_032915944;XM_032915945;XM_032915946;XM_032915947;XM_032915948;XM_032915949;XM_032915950;XM_032915951;XM_032915952;XM_032915954 XP_032771833;XP_032771834;XP_032771835;XP_032771836;XP_032771837;XP_032771838;XP_032771839;XP_032771840;XP_032771841;XP_032771842;XP_032771843;XP_032771845 pre-mRNA 3'-end-processing factor FIP1 protein-coding 625934381 LOC116892651 leukocyte immunoglobulin-like receptor subfamily B member 4 2 176993059 177010866 - 116892651 MODEL JAAIVD010000001;XM_032894472 XP_032750363 protein-coding 625934392 LOC116907670 olfactory receptor 148 8 82408484 82409419 + 22301074 116907670 MODEL JAAIVD010000027;XM_032910764 XP_032766655 protein-coding 625934396 LOC116892484 uncharacterized LOC116892484 2 170128876 170129854 + 116892484 MODEL JAAIVD010000001;XR_004386952 ncrna 625934401 Atg3 autophagy related 3 ENCODES a protein that exhibits Atg12 transferase activity (ortholog); Atg8-family conjugating enzyme activity (ortholog); Atg8-family ligase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); macroautophagy (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH alcoholic cardiomyopathy (ortholog); alcoholic hepatitis (ortholog); FOUND IN Atg12-Atg5-Atg16 complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 4 29921959 29950113 + 30032202 116898871 MODEL JAAIVD010000003;XM_032900240 XP_032756131 ubiquitin-like-conjugating enzyme ATG3 protein-coding 625934416 Pard3b par-3 family cell polarity regulator beta ASSOCIATED WITH autism spectrum disorder (ortholog); Neurodevelopmental Disorders (ortholog); schizophrenia (ortholog); FOUND IN cell junction (ortholog); protein-containing complex (ortholog) 4 135664792 136651677 + 22301074;30032202 116899439 MODEL JAAIVD010000003;XM_032901196 XP_032757087 partitioning defective 3 homolog B protein-coding 625934443 Ndufaf6 NADH:ubiquinone oxidoreductase complex assembly factor 6 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); ASSOCIATED WITH Fanconi renotubular syndrome 5 (ortholog); genetic disease (ortholog); Leigh disease (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 1 132634192 132657442 + 22301074;30032202 116903455 MODEL JAAIVD010000025;XM_032906009 XP_032761900 NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 protein-coding 625934456 Mmp27 matrix metallopeptidase 27 FOUND IN endoplasmic reticulum (ortholog) 8 3803664 3813520 + 22301074;30032202 116907226 MODEL JAAIVD010000027;XM_032910189 XP_032766080 matrix metalloproteinase-27 protein-coding 625934470 LOC116902614 small nucleolar RNA SNORA40 5 31258012 31258132 + 116902614 MODEL JAAIVD010000023 pseudo 625934471 LOC116904299 60S ribosomal protein L30-like 6 44123918 44124283 - 116904299 MODEL JAAIVD010000024 pseudo 625934472 Tulp3 TUB like protein 3 ENCODES a protein that exhibits enzyme binding (ortholog); G protein-coupled receptor binding (ortholog); intraciliary transport particle A binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); bone development (ortholog); brain development (ortholog); ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); genetic disease (ortholog); HEPATORENOCARDIAC DEGENERATIVE FIBROSIS (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); axoneme (ortholog); ciliary base (ortholog) 6 19344979 19383274 + 30032202 116903218 MODEL JAAIVD010000024;XM_032905594;XM_032905595 XP_032761485;XP_032761486 tubby-related protein 3 protein-coding 625934490 LOC116888524 ralBP1-associated Eps domain-containing protein 2 X 20934679 20989051 - 22301074;30032202 116888524 MODEL JAAIVD010000014;XM_032889822 XP_032745713 protein-coding 625934505 LOC116887908 60S ribosomal protein L34-like X 53963057 53966698 + 22301074;30032202 116887908 MODEL JAAIVD010000014;XM_032889381 XP_032745272 protein-coding 625934510 LOC116889979 uncharacterized LOC116889979 1 172192436 172207140 - 116889979 MODEL JAAIVD010000025;XR_004386518;XR_004386519 ncrna 625934517 Myoz3 myozenin 3 FOUND IN Z disc (ortholog) 15 71354004 71370601 + 22301074;30032202 116884717 MODEL JAAIVD010000010;XM_032885903 XP_032741794 myozenin-3 protein-coding 625934525 LOC116904555 killer cell lectin-like receptor subfamily I member 1 6 17872501 17903020 + 30032202 116904555 MODEL JAAIVD010000024;XM_032907350 XP_032763241 protein-coding 625934536 LOC116906401 small nucleolar RNA SNORD113/SNORD114 family 7 127218380 127218450 + 116906401 MODEL JAAIVD010000026;XR_004388667 snorna 625934539 Plin5 perilipin 5 ENCODES a protein that exhibits identical protein binding (ortholog); lipase binding (ortholog); INVOLVED IN cell activation (ortholog); gene expression (ortholog); intracellular signaling cassette (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lipid droplet (ortholog) 4 87501087 87506708 - 30032202 116898060 MODEL JAAIVD010000003;XM_032899456 XP_032755347 perilipin-5 protein-coding 625934551 LOC116911200 protein SMG5-like 1 219238730 219356554 + 22301074;30032202 116911200 MODEL JAAIVD010000025;XM_032915077;XM_032915085;XM_032915092;XM_032915103;XM_032915112;XM_032915121 XP_032770968;XP_032770976;XP_032770983;XP_032770994;XP_032771003;XP_032771012 protein-coding 625934572 Tmem59 transmembrane protein 59 ENCODES a protein that exhibits endopeptidase activity (ortholog); INVOLVED IN glycoprotein biosynthetic process (ortholog); negative regulation of protein localization to plasma membrane (ortholog); positive regulation of autophagy (ortholog); ASSOCIATED WITH Estrogen Resistance (ortholog); FOUND IN Golgi cis cisterna (ortholog); Golgi medial cisterna (ortholog); Golgi trans cisterna (ortholog) 1 47610346 47631582 - 30032202 116899305 MODEL JAAIVD010000025;XM_032900966 XP_032756857 protein-coding 625934584 Atp2b4 ATPase plasma membrane Ca2+ transporting 4 ENCODES a protein that exhibits calcium ion transmembrane transporter activity (ortholog); calmodulin binding (ortholog); nitric-oxide synthase binding (ortholog); INVOLVED IN calcium ion export (ortholog); calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH dystonia (ortholog); gestational diabetes (ortholog); pre-eclampsia (ortholog); FOUND IN basolateral plasma membrane (ortholog); glutamatergic synapse (ortholog); membrane (ortholog) 10 1888633 1986273 + 22301074;30032202 116911096 MODEL JAAIVD010000005;XM_032914927 XP_032770818 plasma membrane calcium-transporting ATPase 4 protein-coding 625934609 LOC116892722 zinc finger protein 583 2 179803072 179823709 + 30032202 116892722 MODEL JAAIVD010000001;XM_032894590;XM_032894591;XM_032894592;XM_032894593 XP_032750481;XP_032750482;XP_032750483;XP_032750484 protein-coding 625934629 Stpg2 sperm tail PG-rich repeat containing 2 3 19715779 19944332 - 116895228 MODEL JAAIVD010000012;XM_032896555 XP_032752446 sperm-tail PG-rich repeat-containing protein 2 protein-coding 625934647 LOC116887831 60S ribosomal protein L7-like 1 X 36819798 36820590 + 116887831 MODEL JAAIVD010000014 pseudo 625934648 LOC116913074 PHD finger protein 11-like 12 64982735 64986155 + 116913074 MODEL JAAIVD010000007;XM_032917207 XP_032773098 protein-coding 625934656 LOC116889524 U1 spliceosomal RNA X 11855973 11856134 - 116889524 MODEL JAAIVD010000014;XR_004386466 snrna 625934659 LOC116900847 WW domain-binding protein 1-like 5 61062475 61063266 - 116900847 MODEL JAAIVD010000023 pseudo 625934660 Cnot6l CCR4-NOT transcription complex subunit 6 like ENCODES a protein that exhibits poly(A)-specific ribonuclease activity (ortholog); INVOLVED IN mRNA destabilization (ortholog); nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay (ortholog); positive regulation of cell population proliferation (ortholog); PARTICIPATES IN microRNA pathway; FOUND IN CCR4-NOT complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 11 8083319 8174256 + 22301074;30032202 116912871 MODEL JAAIVD010000006;XM_032917091;XM_032917092;XM_032917093;XM_032917094 XP_032772982;XP_032772983;XP_032772984;XP_032772985 CCR4-NOT transcription complex subunit 6-like protein-coding 625934685 Atp8b3 ATPase phospholipid transporting 8B3 INVOLVED IN binding of sperm to zona pellucida (ortholog); phospholipid translocation (ortholog); FOUND IN acrosomal vesicle (ortholog); membrane (ortholog) 1 154349331 154366327 + 22301074;30032202 116906739 MODEL JAAIVD010000025;XM_032909601 XP_032765492 phospholipid-transporting ATPase IK protein-coding 625934715 LOC116900566 olfactory receptor 4F3/4F16/4F29-like 5 90219742 90220644 + 116900566 MODEL JAAIVD010000023 pseudo 625934716 LOC116886159 40S ribosomal protein S2-like 1 10901540 10903605 - 116886159 MODEL JAAIVD010000025 pseudo 625934717 Dcbld2 discoidin, CUB and LCCL domain containing 2 INVOLVED IN negative regulation of cell growth (ortholog); wound healing (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog); Stomach Neoplasms (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) 4 42400402 42459228 + 116898913 MODEL JAAIVD010000003;XM_032900322 XP_032756213 discoidin, CUB and LCCL domain-containing protein 2 protein-coding 625934737 LOC116909832 olfactory receptor 56-like 9 39770387 39771334 + 22301074 116909832 MODEL JAAIVD010000002;XM_032913549 XP_032769440 protein-coding 625934740 Elavl3 ELAV like RNA binding protein 3 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog) 8 18268199 18302289 - 22301074 116908074 MODEL JAAIVD010000027;XM_032911349 XP_032767240 ELAV-like protein 3 protein-coding 625934751 LOC116893123 60S ribosomal protein L18-like 2 75150866 75168886 - 116893123 MODEL JAAIVD010000001 pseudo 625934752 LOC116898840 cytochrome c oxidase copper chaperone ENCODES a protein that exhibits copper chaperone activity (ortholog); copper ion binding (ortholog); cuprous ion binding (ortholog); INVOLVED IN heart development (ortholog); mitochondrial respiratory chain complex IV assembly (ortholog); ASSOCIATED WITH Chronic Hepatitis (ortholog); Lung Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) 4 23296148 23301941 + 22301074;30032202 116898840 MODEL JAAIVD010000003;XM_032900194 XP_032756085 protein-coding 625934759 LOC116896432 uncharacterized LOC116896432 1 30939439 30953011 - 116896432 MODEL JAAIVD010000025;XR_004387337 ncrna 625934764 LOC116895804 heterogeneous nuclear ribonucleoprotein F-like 3 65976879 65978186 - 116895804 MODEL JAAIVD010000012 pseudo 625934765 Amigo3 adhesion molecule with Ig like domain 3 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN heterophilic cell-cell adhesion (ortholog); negative regulation of neuron projection development (ortholog); nervous system development (ortholog); ASSOCIATED WITH Optic Nerve Injuries (ortholog); sciatic neuropathy (ortholog); Spinal Cord Compression (ortholog) 8 99381095 99384239 + 22301074;30032202 116907564 MODEL JAAIVD010000027;XM_032910588 XP_032766479 amphoterin-induced protein 3 protein-coding 625934770 Ngdn neuroguidin INVOLVED IN negative regulation of protein localization to plasma membrane (ortholog); postsynaptic modulation of chemical synaptic transmission (ortholog); regulation of translation at postsynapse (ortholog); FOUND IN glutamatergic synapse (ortholog); nucleolus (ortholog); perforant pathway to dendrate granule cell synapse (ortholog) 12 69972120 69979325 - 30032202 116913689 MODEL JAAIVD010000007;XM_032917980;XM_032917981;XM_032917982 XP_032773871;XP_032773872;XP_032773873 protein-coding 625934791 LOC116893383 ornithine decarboxylase-like 2 167660640 167663642 - 116893383 MODEL JAAIVD010000001 pseudo 625934792 Psmd7 proteasome 26S subunit, non-ATPase 7 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN regulation of AMPA receptor activity (ortholog); FOUND IN proteasome complex (ortholog); proteasome regulatory particle (ortholog); synaptic vesicle (ortholog) 17 27304449 27312029 - 22301074;30032202 116886384 MODEL JAAIVD010000011;XM_032887851 XP_032743742 26S proteasome non-ATPase regulatory subunit 7 protein-coding 625934803 LOC116913841 eukaryotic translation initiation factor 1-like 12 26340364 26340656 - 116913841 MODEL JAAIVD010000007 pseudo 625934804 Angpt4 angiopoietin 4 ENCODES a protein that exhibits receptor ligand activity (ortholog); receptor tyrosine kinase binding (ortholog); transmembrane receptor protein tyrosine kinase activator activity (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to hypoxia (ortholog); endothelial cell proliferation (ortholog); FOUND IN extracellular region (ortholog) 5 131278411 131311201 + 30032202 116900691 MODEL JAAIVD010000023;XM_032902393 XP_032758284 angiopoietin-4 protein-coding 625934817 Usp48 ubiquitin specific peptidase 48 ENCODES a protein that exhibits deubiquitinase activity (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); autosomal dominant nonsyndromic deafness 85 (ortholog); prostate cancer (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 1 20564494 20635693 - 22301074;30032202 116894143 MODEL JAAIVD010000025;XM_032895865 XP_032751756 ubiquitin carboxyl-terminal hydrolase 48 protein-coding 625934849 LOC116888798 superoxide dismutase [Mn], mitochondrial-like 1 102695001 102695546 + 116888798 MODEL JAAIVD010000025 pseudo 625934850 LOC116909544 phosphoglycerate mutase 1-like 9 90282256 90283700 - 22301074;30032202 116909544 MODEL JAAIVD010000002;XM_032913159 XP_032769050 protein-coding 625934855 Trnar-ccu transfer RNA arginine (anticodon CCU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 865032 865104 - 116910826 MODEL JAAIVD010000002 trna 625934856 Tas2r3 taste 2 receptor member 3 ENCODES a protein that exhibits bitter taste receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog) 6 99318248 99319532 - 22301074;30032202 116903915 MODEL JAAIVD010000024;XM_032906679 XP_032762570 taste receptor type 2 member 3 protein-coding 625934861 Arl1 ARF like GTPase 1 ENCODES a protein that exhibits enzyme activator activity (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN Golgi organization (ortholog); Golgi vesicle transport (ortholog); protein localization to Golgi apparatus (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); trans-Golgi network (ortholog) 1 167782332 167794504 + 22301074;30032202 116907805 MODEL JAAIVD010000025;XM_032910967 XP_032766858 ADP ribosylation factor like GTPase 1;ADP-ribosylation factor-like protein 1 protein-coding 625934871 Abcc12 ATP binding cassette subfamily C member 12 ASSOCIATED WITH bone marrow disease (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); FOUND IN endoplasmic reticulum (ortholog) 17 13836575 13907935 - 22301074;30032202 116886237 MODEL JAAIVD010000011;XM_032887643;XM_032887644;XM_032887645 XP_032743534;XP_032743535;XP_032743536 multidrug resistance-associated protein 9 protein-coding 625934913 LOC116885064 small nucleolar RNA SNORA17 15 32586393 32586494 + 116885064 MODEL JAAIVD010000010 pseudo 625934914 LOC116902467 U6 spliceosomal RNA 5 84080657 84080763 + 116902467 MODEL JAAIVD010000023;XR_004388085 snrna 625934917 LOC116883538 cathepsin L1 14 75206430 75213226 + 30032202 116883538 MODEL JAAIVD010000009;XM_032884709 XP_032740600 protein-coding 625934929 LOC116893757 peptidyl-prolyl cis-trans isomerase D-like 2 28104172 28105284 - 116893757 MODEL JAAIVD010000001 pseudo 625934930 LOC116907302 60S ribosomal protein L30-like 8 26215362 26237738 + 116907302 MODEL JAAIVD010000027 pseudo 625934931 Tsks testis specific serine kinase substrate ENCODES a protein that exhibits protein kinase binding (ortholog); ASSOCIATED WITH myoepithelioma (ortholog); FOUND IN centriole (ortholog) 2 154586047 154599944 - 30032202 116892182 MODEL JAAIVD010000001;XM_032893702;XM_032893703 XP_032749593;XP_032749594 testis-specific serine kinase substrate protein-coding 625934947 Creb3l4 cAMP responsive element binding protein 3 like 4 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); spermatogenesis (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; ASSOCIATED WITH Neoplasm Recurrence, Local (ortholog); prostate adenocarcinoma (ortholog); prostate carcinoma in situ (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) 3 63399376 63405137 + 30032202 116896616 MODEL JAAIVD010000012;XM_032897876;XM_032897877 XP_032753767;XP_032753768 cyclic AMP-responsive element-binding protein 3-like protein 4 protein-coding 625934963 LOC116904773 small nucleolar RNA SNORA17 6 41990889 41991025 + 116904773 MODEL JAAIVD010000024;XR_004388440 snorna 625934966 Lrrc8c leucine rich repeat containing 8 VRAC subunit C ENCODES a protein that exhibits volume-sensitive anion channel activity (ortholog); INVOLVED IN aspartate transmembrane transport (ortholog); cellular response to osmotic stress (ortholog); cyclic-GMP-AMP transmembrane import across plasma membrane (ortholog); ASSOCIATED WITH multiple sclerosis (ortholog); TIMES Syndrome (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); monoatomic ion channel complex (ortholog) 11 15242452 15329634 + 22301074 116912237 MODEL JAAIVD010000006;XM_032916213;XM_032916214;XM_032916215 XP_032772104;XP_032772105;XP_032772106 volume-regulated anion channel subunit LRRC8C protein-coding 625934978 LOC116915176 U6 spliceosomal RNA 13 70423973 70424072 + 116915176 MODEL JAAIVD010000008 pseudo 625934979 Incenp inner centromere protein ENCODES a protein that exhibits molecular function activator activity (ortholog); INVOLVED IN chromosome segregation (ortholog); mitotic cytokinesis (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); melanoma (ortholog); nephronophthisis (ortholog); FOUND IN central element (ortholog); chromocenter (ortholog); chromosome, centromeric region (ortholog) 2 151309992 151337311 + 30032202 116892081 MODEL JAAIVD010000001;XM_032893551;XM_032893552;XM_032893553;XM_032893554;XM_032893555 XP_032749442;XP_032749443;XP_032749444;XP_032749445;XP_032749446 protein-coding 625935017 Adm adrenomedullin ENCODES a protein that exhibits adrenomedullin receptor binding (ortholog); hormone activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adrenomedullin receptor signaling pathway (ortholog); androgen metabolic process (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; p38 MAPK signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acidoses (ortholog); Albuminuria (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog) 2 90815292 90817518 - 22301074;30032202 116891660 MODEL JAAIVD010000001;XM_032892911 XP_032748802 protein-coding 625935025 LOC116894890 U6 spliceosomal RNA 2 8295240 8295335 + 116894890 MODEL JAAIVD010000001 pseudo 625935026 LOC116896406 chitinase-like protein 3 3 51921490 51942487 - 22301074;30032202 116896406 MODEL JAAIVD010000012;XM_032897549 XP_032753440 protein-coding 625935039 Gins2 GINS complex subunit 2 INVOLVED IN DNA replication (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Salivary Gland Neoplasms (ortholog); FOUND IN nucleus (ortholog) 17 40217425 40229483 - 22301074;30032202 116886691 MODEL JAAIVD010000011;XM_032888188;XM_032888189 XP_032744079;XP_032744080 DNA replication complex GINS protein PSF2 protein-coding 625935053 Ppp2r5e protein phosphatase 2 regulatory subunit B'epsilon ASSOCIATED WITH Chromosomal Instability (ortholog); Micronuclei, Chromosome-Defective (ortholog); transient cerebral ischemia (ortholog); FOUND IN cytosol (ortholog) 7 89616683 89765223 - 22301074;30032202 116905173 MODEL JAAIVD010000026;XM_032907946;XM_032907947 XP_032763837;XP_032763838 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform protein-coding 625935073 LOC116900902 adaptin ear-binding coat-associated protein 1-like 5 76165698 76364684 + 116900902 MODEL JAAIVD010000023 pseudo 625935074 Ttyh2 tweety family member 2 ENCODES a protein that exhibits calcium ion binding (ortholog); chloride channel activity (ortholog); volume-sensitive anion channel activity (ortholog); INVOLVED IN L-glutamate transmembrane transport (ortholog); FOUND IN plasma membrane (ortholog) 9 74604667 74648274 - 30032202 116909650 MODEL JAAIVD010000002;XM_032913303 XP_032769194 protein tweety homolog 2 protein-coding 625935092 Arl6ip1 ARL6 interacting reticulophagy regulator 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cotranslational protein targeting to membrane (ortholog); endoplasmic reticulum tubular network formation (ortholog); endoplasmic reticulum tubular network membrane organization (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary spastic paraplegia 61 (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 2 83510577 83520164 + 116891614 MODEL JAAIVD010000001;XM_032892822 XP_032748713 ADP ribosylation factor like GTPase 6 interacting protein 1;ADP-ribosylation factor-like protein 6-interacting protein 1;ARF like GTPase 6 interacting protein 1 protein-coding 625935102 Ccdc175 coiled-coil domain containing 175 7 85775868 86240077 - 116905147 MODEL JAAIVD010000026;XM_032907915 XP_032763806 coiled-coil domain-containing protein 175 protein-coding 625935127 Pde3b phosphodiesterase 3B ENCODES a protein that exhibits 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); 3',5'-cyclic-GMP phosphodiesterase activity (ortholog); 3',5'-cyclic-nucleotide phosphodiesterase activity (ortholog); INVOLVED IN endocrine pancreas development (ortholog); glucose homeostasis (ortholog); insulin receptor signaling pathway (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); guanyl-nucleotide exchange factor complex (ortholog) 2 87016316 87135460 - 22301074;30032202 116893136 MODEL JAAIVD010000001;XM_032895065 XP_032750956 cGMP-inhibited 3',5'-cyclic phosphodiesterase B protein-coding 625935148 LOC116888079 60S acidic ribosomal protein P0-like X 90416933 90435853 - 116888079 MODEL JAAIVD010000014 pseudo 625935149 Necap2 NECAP endocytosis associated 2 ASSOCIATED WITH prostate cancer (ortholog); FOUND IN clathrin vesicle coat (ortholog) 1 17069413 17081578 + 22301074;30032202 116893464 MODEL JAAIVD010000025;XM_032895227;XM_032895231 XP_032751118;XP_032751122 adaptin ear-binding coat-associated protein 2 protein-coding 625935165 Sfxn2 sideroflexin 2 INVOLVED IN mitochondrial transmembrane transport (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 2 46046027 46067344 + 22301074;30032202 116891253 MODEL JAAIVD010000001;XM_032892133 XP_032748024 sideroflexin-2 protein-coding 625935181 Mpp1 MAGUK p55 scaffold protein 1 INVOLVED IN regulation of neutrophil chemotaxis (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); Lung Neoplasms (ortholog); FOUND IN cortical cytoskeleton (ortholog); membrane (ortholog); plasma membrane (ortholog) X 302067 310291 + 30032202 116888889 MODEL JAAIVD010000014;XM_032890151 XP_032746042 55 kDa erythrocyte membrane protein;membrane palmitoylated protein 1 protein-coding 625935197 Moxd1 monooxygenase DBH like 1 ASSOCIATED WITH silicosis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 2 210310853 210391410 + 22301074;30032202 116892945 MODEL JAAIVD010000001;XM_032894895 XP_032750786 DBH-like monooxygenase protein 1 protein-coding 625935212 LOC116906518 U4 spliceosomal RNA 7 99199818 99199926 - 116906518 MODEL JAAIVD010000026 pseudo 625935213 Rbbp4 RB binding protein 4, chromatin remodeling factor ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); histone binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); DNA replication-dependent chromatin assembly (ortholog); regulation of DNA-templated transcription (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; Hedgehog signaling pathway; ISWI family mediated chromatin remodeling pathway; FOUND IN CAF-1 complex (ortholog); chromatin (ortholog); chromosome, telomeric region (ortholog) 1 28813792 28833107 + 30032202 116896195 MODEL JAAIVD010000025;XM_032897246 XP_032753137 histone-binding protein RBBP4 protein-coding 625935229 Afdn afadin, adherens junction formation factor ENCODES a protein that exhibits actin filament binding (ortholog); cell adhesion molecule binding (ortholog); LIM domain binding (ortholog); INVOLVED IN adherens junction maintenance (ortholog); bicellular tight junction assembly (ortholog); brain morphogenesis (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); breast carcinoma (ortholog); Parkinson's disease (ortholog); FOUND IN adherens junction (ortholog); apical junction complex (ortholog); apical part of cell (ortholog) 2 183478953 183499338 - 30032202 116892775 MODEL JAAIVD010000001;XM_032894650 XP_032750541 afadin protein-coding 625935240 LOC116886984 cyclin-dependent kinase 2-interacting protein-like 18 45375978 45376614 - 116886984 MODEL JAAIVD010000013 pseudo 625935241 LOC116906134 60S ribosomal protein L23a-like 7 87276807 87279481 - 22301074;30032202 116906134 MODEL JAAIVD010000026;XM_032909126 XP_032765017 protein-coding 625935245 LOC116884132 U6 spliceosomal RNA 14 81737497 81737605 + 116884132 MODEL JAAIVD010000009;XR_004385856 snrna 625935248 LOC116894750 DNA polymerase epsilon subunit 3-like 2 142755042 142755496 + 116894750 MODEL JAAIVD010000001 pseudo 625935249 LOC116890590 U1 spliceosomal RNA 1 19372396 19372552 + 116890590 MODEL JAAIVD010000025;XR_004386749 snrna 625935252 LOC116893564 40S ribosomal protein S6-like 2 217548019 217697576 + 116893564 MODEL JAAIVD010000001 pseudo 625935253 LOC116897933 olfactory receptor 183 4 42872066 42872998 + 22301074;30032202 116897933 MODEL JAAIVD010000003;XM_032899333 XP_032755224 protein-coding 625935257 Npff neuropeptide FF-amide peptide precursor ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); neuropeptide activity (ortholog); neuropeptide hormone activity (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); excitatory postsynaptic potential (ortholog); maternal process involved in female pregnancy (ortholog); ASSOCIATED WITH Inflammation (ortholog); FOUND IN axon terminus (ortholog); dendrite (ortholog); extracellular region (ortholog) 1 260557197 260560602 + 22301074;30032202 116883342 MODEL JAAIVD010000025;XM_032884421 XP_032740312 pro-FMRFamide-related neuropeptide FF protein-coding 625935264 LOC116902539 small nucleolar RNA SNORA19 5 103900776 103900907 - 116902539 MODEL JAAIVD010000023;XR_004388142 snorna 625935267 Cmya5 cardiomyopathy associated 5 ENCODES a protein that exhibits identical protein binding (ortholog); protein phosphatase inhibitor activity (ortholog); INVOLVED IN negative regulation of calcineurin-NFAT signaling cascade (ortholog); regulation of skeletal muscle adaptation (ortholog); FOUND IN costamere (ortholog) 3 203183448 203276296 + 22301074 116897295 MODEL JAAIVD010000012;XM_032899030 XP_032754921 cardiomyopathy-associated protein 5 protein-coding 625935285 LOC116906106 glyceraldehyde-3-phosphate dehydrogenase-like 7 76463245 76464002 + 116906106 MODEL JAAIVD010000026 pseudo 625935286 Usp2 ubiquitin specific peptidase 2 ENCODES a protein that exhibits cyclin binding (ortholog); cysteine-type deubiquitinase activity (ortholog); identical protein binding (ortholog); INVOLVED IN circadian behavior (ortholog); circadian regulation of gene expression (ortholog); entrainment of circadian clock by photoperiod (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Muscle Hypotonia (ortholog); FOUND IN cell cortex (ortholog); centrosome (ortholog); cytoplasm (ortholog) 8 38629076 38657190 + 22301074;30032202 116907038 MODEL JAAIVD010000027;XM_032909984;XM_032909985;XM_032909986 XP_032765875;XP_032765876;XP_032765877 ubiquitin carboxyl-terminal hydrolase 2 protein-coding 625935309 LOC116897513 small Cajal body-specific RNA 4 3 64865190 64865317 - 116897513 MODEL JAAIVD010000012;XR_004387532 ncrna 625935312 LOC116890092 60S ribosomal protein L7-like 1 229519403 229520189 - 116890092 MODEL JAAIVD010000025 pseudo 625935313 LOC116906762 glyceraldehyde-3-phosphate dehydrogenase-like 8 8850322 8851290 + 116906762 MODEL JAAIVD010000027 pseudo 625935314 Tmem35b transmembrane protein 35B 1 31152309 31155718 - 116886980 MODEL JAAIVD010000025;XM_032888470 XP_032744361 protein-coding 625935321 LOC116890666 potassium voltage-gated channel subfamily KQT member 1-like 2 6272393 6370963 - 22301074;30032202 116890666 MODEL JAAIVD010000001;XM_032891071 XP_032746962 protein-coding 625935330 LOC116900883 olfactory receptor 5D13-like 5 69814023 69850930 - 22301074;30032202 116900883 MODEL JAAIVD010000023;XM_032902560 XP_032758451 protein-coding 625935338 LOC116910775 U6 spliceosomal RNA 9 67496139 67496246 - 116910775 MODEL JAAIVD010000002;XR_004389283 snrna 625935341 LOC116897555 small nucleolar RNA SNORA17 3 116166398 116166534 + 116897555 MODEL JAAIVD010000012;XR_004387568 snorna 625935344 Lrrc49 leucine rich repeat containing 49 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN microtubule cytoskeleton organization (ortholog); FOUND IN centriolar satellite (ortholog); microtubule (ortholog) 8 54881283 54987753 - 22301074 116908189 MODEL JAAIVD010000027;XM_032911477 XP_032767368 leucine-rich repeat-containing protein 49 protein-coding 625935365 Rnf32 ring finger protein 32 FOUND IN aggresome (ortholog); cytosol (ortholog); endosome (ortholog) 6 157698664 157744299 - 22301074 116904243 MODEL JAAIVD010000024;XM_032907193;XM_032907194;XM_032907195;XM_032907196;XM_032907197;XM_032907198 XP_032763084;XP_032763085;XP_032763086;XP_032763087;XP_032763088;XP_032763089 protein-coding 625935388 Ctnna2 catenin alpha 2 ENCODES a protein that exhibits actin filament binding (ortholog); identical protein binding (ortholog); INVOLVED IN axonogenesis (ortholog); brain morphogenesis (ortholog); dendrite morphogenesis (ortholog); ASSOCIATED WITH complex cortical dysplasia with other brain malformations 9 (ortholog); genetic disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN adherens junction (ortholog); axon (ortholog); basolateral plasma membrane (ortholog) 6 68377281 69461297 + 22301074;30032202 116903665 MODEL JAAIVD010000024;XM_032906321;XM_032906322;XM_032906323;XM_032906324 XP_032762212;XP_032762213;XP_032762214;XP_032762215 catenin alpha-2 protein-coding 625935419 Znf821 zinc finger protein 821 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); FOUND IN nuclear speck (ortholog) 17 29425921 29443527 + 30032202 116886196 MODEL JAAIVD010000011;XM_032887574;XM_032887575;XM_032887576;XM_032887577;XM_032887578 XP_032743465;XP_032743466;XP_032743467;XP_032743468;XP_032743469 protein-coding 625935442 Celf4 CUGBP Elav-like family member 4 ENCODES a protein that exhibits mRNA binding (ortholog); pre-mRNA binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); in utero embryonic development (ortholog); mRNA splice site recognition (ortholog); ASSOCIATED WITH Developmental Disease (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 15 18115625 18391795 + 30032202 116884315 MODEL JAAIVD010000010;XM_032885424;XM_032885425;XM_032885426;XM_032885427;XM_032885428;XM_032885430;XM_032885431;XM_032885432;XM_032885433;XM_032885434;XM_032885435;XM_032885436;XM_032885437;XM_032885438;XM_032885439;XM_032885440;XM_032885441;XM_032885442;XM_032885443;XM_032885444;XM_032885445;XM_032885446;XM_032885447;XM_032885448 XP_032741315;XP_032741316;XP_032741317;XP_032741318;XP_032741319;XP_032741321;XP_032741322;XP_032741323;XP_032741324;XP_032741325;XP_032741326;XP_032741327;XP_032741328;XP_032741329;XP_032741330;XP_032741331;XP_032741332;XP_032741333;XP_032741334;XP_032741335;XP_032741336;XP_032741337;XP_032741338;XP_032741339 protein-coding 625935492 Ubiad1 UbiA prenyltransferase domain containing 1 ENCODES a protein that exhibits antioxidant activity (ortholog); menadiol geranylgeranyltransferase activity (ortholog); prenyltransferase activity (ortholog); INVOLVED IN menaquinone biosynthetic process (ortholog); ubiquinone biosynthetic process (ortholog); vitamin K biosynthetic process (ortholog); ASSOCIATED WITH Cardiac Edema (ortholog); Intracranial Hemorrhages (ortholog); Schnyder corneal dystrophy (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 1 12326928 12338076 + 22301074;30032202 116892809 MODEL JAAIVD010000025;XM_032894690 XP_032750581 ubiA prenyltransferase domain-containing protein 1 protein-coding 625935498 Ddrgk1 DDRGK domain containing 1 ENCODES a protein that exhibits ubiquitin-like protein ligase binding (ortholog); UFM1-modified protein reader activity (ortholog); INVOLVED IN cartilage development (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH genetic disease (ortholog); Spondyloepimetaphyseal Dysplasia, Shohat Type (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 5 110395351 110405971 - 116901974 MODEL JAAIVD010000023;XM_032904220 XP_032760111 DDRGK domain-containing protein 1 protein-coding 625935511 LOC116897509 small nucleolar RNA SNORA42/SNORA80 family 3 128366192 128366332 - 116897509 MODEL JAAIVD010000012;XR_004387529 snorna 625935514 LOC116886168 ubiquitin-conjugating enzyme E2 R1-like 17 33268717 33271129 - 116886168 MODEL JAAIVD010000011 pseudo 625935515 LOC116888565 protein PRRC2C-like X 17939598 17940081 - 30032202 116888565 MODEL JAAIVD010000014;XM_032889869 XP_032745760 protein-coding 625935520 LOC116911965 phospholipid hydroperoxide glutathione peroxidase-like 11 29685796 29686451 - 116911965 MODEL JAAIVD010000006 pseudo 625935521 LOC116895371 40S ribosomal protein S23-like 3 53019444 53019882 + 116895371 MODEL JAAIVD010000012 pseudo 625935522 Spz1 spermatogenic leucine zipper 1 ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); E-box binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Stomach Neoplasms (ortholog); FOUND IN nucleus (ortholog) 3 203723989 203725585 + 30032202 116895690 MODEL JAAIVD010000012;XM_032896891 XP_032752782 spermatogenic leucine zipper protein 1 protein-coding 625935527 LOC116900400 olfactory receptor 4P4-like 5 70035637 70036573 - 116900400 MODEL JAAIVD010000023 pseudo 625935528 Cntrob centrobin, centriole duplication and spindle assembly protein ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN centriole replication (ortholog); centrosome separation (ortholog); mitotic cytokinetic process (ortholog); ASSOCIATED WITH male infertility due to acephalic spermatozoa (ortholog); polycystic ovary syndrome (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 9 48909851 48934071 - 30032202 116909788 MODEL JAAIVD010000002;XM_032913483;XM_032913484 XP_032769374;XP_032769375 centrobin protein-coding 625935554 Kcnv1 potassium voltage-gated channel modifier subfamily V member 1 ENCODES a protein that exhibits potassium channel activity (ortholog); FOUND IN plasma membrane (ortholog) 1 219633097 219640739 + 22301074;30032202 116911269 MODEL JAAIVD010000025;XM_032915177 XP_032771068 potassium voltage-gated channel subfamily V member 1 protein-coding 625935562 C7H14orf132 chromosome 7 C14orf132 homolog 7 123114478 123146272 + 116906266 MODEL JAAIVD010000026;XM_032909156 XP_032765047 uncharacterized protein C14orf132 homolog protein-coding 625935568 LOC116889818 proteasome subunit beta type-3-like 1 239205228 239212775 - 116889818 MODEL JAAIVD010000025 pseudo 625935569 Fam221a family with sequence similarity 221 member A 6 131152263 131173559 - 116902972 MODEL JAAIVD010000024;XM_032905292 XP_032761183 protein FAM221A protein-coding 625935580 LOC116904497 60S ribosomal protein L37-like 6 157437335 157437630 + 116904497 MODEL JAAIVD010000024 pseudo 625935581 LOC116913033 U4 spliceosomal RNA 11 86043387 86043573 - 116913033 MODEL JAAIVD010000006 pseudo 625935582 LOC116895020 small nucleolar RNA SNORA17 2 82355954 82356086 + 116895020 MODEL JAAIVD010000001;XR_004387206 snorna 625935585 LOC116883412 uncharacterized LOC116883412 14 9949882 9952341 - 116883412 MODEL JAAIVD010000009;XM_032884539 XP_032740430 uncharacterized protein LOC116883412 protein-coding 625935591 LOC116902393 aldo-keto reductase family 1 member B1-like 5 155465555 155466497 + 116902393 MODEL JAAIVD010000023 pseudo 625935592 LOC116890603 small nucleolar RNA SNORA53 1 170192992 170193237 - 116890603 MODEL JAAIVD010000025;XR_004386754 snorna 625935595 Osbpl10 oxysterol binding protein like 10 ENCODES a protein that exhibits cholesterol binding (ortholog); phosphatidylserine binding (ortholog); phosphatidylserine-phosphatidylinositol-4-phosphate exchange activity (ortholog); INVOLVED IN lysosomal membrane organization (ortholog); phospholipid homeostasis (ortholog); phospholipid transfer to membrane (ortholog); FOUND IN endoplasmic reticulum-endosome membrane contact site (ortholog); endoplasmic reticulum-trans-Golgi network membrane contact site (ortholog); intermembrane lipid transporter complex (ortholog) 8 105592125 105839906 + 30032202 116907839 MODEL JAAIVD010000027;XM_032911025;XM_032911026 XP_032766916;XP_032766917 oxysterol-binding protein-related protein 10 protein-coding 625935614 LOC116909289 microfibrillar-associated protein 1-like 9 48239880 48241316 - 30032202 116909289 MODEL JAAIVD010000002;XM_032912828 XP_032768719 protein-coding 625935619 LOC116887952 selenoprotein K-like X 63781648 63782007 - 116887952 MODEL JAAIVD010000014 pseudo 625935620 LOC116893112 collagen alpha-1(I) chain-like 2 68721908 68736237 - 116893112 MODEL JAAIVD010000001;XM_032895050 XP_032750941 protein-coding 625935627 LOC116900956 glyceraldehyde-3-phosphate dehydrogenase-like 5 96272857 96282208 - 116900956 MODEL JAAIVD010000023 pseudo 625935628 Chd2 chromodomain helicase DNA binding protein 2 ENCODES a protein that exhibits histone binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN DNA damage response (ortholog); gene expression (ortholog); hematopoietic stem cell differentiation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); benign epilepsy with centrotemporal spikes (ortholog); FOUND IN nucleus (ortholog) 2 126955367 127067636 + 22301074;30032202 116891971 MODEL JAAIVD010000001;XM_032893412 XP_032749303 chromodomain-helicase-DNA-binding protein 2 protein-coding 625935671 Pou2f3 POU class 2 homeobox 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN cell differentiation (ortholog); epidermis development (ortholog); keratinocyte differentiation (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) 8 37699525 37780272 - 22301074;30032202 116906867 MODEL JAAIVD010000027;XM_032909771 XP_032765662 POU domain, class 2, transcription factor 3 protein-coding 625935688 LOC116886731 small nucleolar RNA SNORA17 17 31105370 31105498 + 116886731 MODEL JAAIVD010000011;XR_004386141 snorna 625935691 LOC116890967 pepsin A-5 2 10151310 10160308 - 22301074;30032202 116890967 MODEL JAAIVD010000001;XM_032891629 XP_032747520 protein-coding 625935703 LOC116908049 40S ribosomal protein S19-like 8 27647991 27648425 + 116908049 MODEL JAAIVD010000027 pseudo 625935704 LOC116911004 carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein-like 10 49507934 49794661 - 30032202 116911004 MODEL JAAIVD010000005;XM_032914730;XM_032914731;XM_032914732 XP_032770621;XP_032770622;XP_032770623 uncharacterized protein C1orf226-like protein-coding 625935725 Ptgs2 prostaglandin-endoperoxide synthase 2 ENCODES a protein that exhibits enzyme binding (ortholog); oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (ortholog); oxidoreductase activity, acting on single donors with incorporation of molecular oxygen (ortholog); INVOLVED IN angiogenesis (ortholog); bone mineralization (ortholog); brown fat cell differentiation (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Abscess (ortholog); acute kidney failure (ortholog); FOUND IN caveola (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) 10 29593573 29601879 + 22301074;30032202 116911410 A0A8A1UA99 MODEL JAAIVD010000005;XM_032915374 XP_032771265 prostaglandin G/H synthase 2 protein-coding 625935739 LOC116895468 protein tyrosine phosphatase type IVA 1-like 3 85058808 85059317 + 116895468 MODEL JAAIVD010000012 pseudo 625935740 Septin11 septin 11 INVOLVED IN regulation of synapse organization (ortholog); ASSOCIATED WITH autosomal recessive cerebellar ataxia (ortholog); methylmalonic acidemia (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); postsynapse (ortholog) 11 5894014 5979781 + 22301074;30032202 116912329 MODEL JAAIVD010000006;XM_032916366;XM_032916367;XM_032916368;XM_032916370;XM_032916371;XM_032916372;XM_032916373;XR_004389446 XP_032772257;XP_032772258;XP_032772259;XP_032772261;XP_032772262;XP_032772263;XP_032772264 septin-11 protein-coding 625935769 Nr3c1 nuclear receptor subfamily 3 group C member 1 ENCODES a protein that exhibits chromatin binding (ortholog); core promoter sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN adrenal gland development (ortholog); associative learning (ortholog); astrocyte differentiation (ortholog); PARTICIPATES IN cortisol signaling pathway; forkhead class A signaling pathway; prednisolone pharmacodynamics pathway; ASSOCIATED WITH 46, XX Disorders of Sex Development (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 15 5431948 5522978 + 22301074 116884713 MODEL JAAIVD010000010;XM_032885898 XP_032741789 glucocorticoid receptor protein-coding 625935782 Lemd2 LEM domain nuclear envelope protein 2 INVOLVED IN heart formation (ortholog); negative regulation of MAPK cascade (ortholog); negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); cataract (ortholog); cataract 46 juvenile-onset (ortholog); FOUND IN chromatin (ortholog); endoplasmic reticulum (ortholog); nuclear envelope (ortholog) 18 6609294 6623419 + 30032202 116887010 MODEL JAAIVD010000013;XM_032888495 XP_032744386 LEM domain-containing protein 2 protein-coding 625935795 Lrrc4b leucine rich repeat containing 4B ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN positive regulation of synapse assembly (ortholog); regulation of postsynaptic density assembly (ortholog); regulation of presynapse assembly (ortholog); FOUND IN cerebellar mossy fiber (ortholog); glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog) 2 155069781 155103243 - 22301074;30032202 116892212 MODEL JAAIVD010000001;XM_032893771;XM_032893772 XP_032749662;XP_032749663 leucine-rich repeat-containing protein 4B protein-coding 625935807 Hesx1 HESX homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN brain development (ortholog); camera-type eye development (ortholog); canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH amenorrhea (ortholog); combined or isolated pituitary hormone deficiency 1 (ortholog); combined pituitary hormone deficiency (ortholog); FOUND IN nucleus (ortholog) 13 2732090 2734202 + 30032202 116915057 MODEL JAAIVD010000008;XM_032919475 XP_032775366 homeobox expressed in ES cells 1 protein-coding 625935815 LOC116889263 60S ribosomal protein L35a-like X 38610498 38610907 - 116889263 MODEL JAAIVD010000014 pseudo 625935816 Dhx16 DEAH-box helicase 16 ENCODES a protein that exhibits molecular adaptor activity (ortholog); pattern recognition receptor activity (ortholog); ubiquitin binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 18 9089487 9102188 + 22301074;30032202 116887476 MODEL JAAIVD010000013;XM_032889092 XP_032744983 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 protein-coding 625935840 Map7d1 MAP7 domain containing 1 INVOLVED IN microtubule cytoskeleton organization (ortholog); FOUND IN centrosome (ortholog); microtubule cytoskeleton (ortholog); spindle (ortholog) 1 32032727 32057420 + 22301074;30032202 116896654 MODEL JAAIVD010000025;XM_032897990;XM_032897998;XM_032898009;XM_032898020;XM_032898029;XM_032898038 XP_032753881;XP_032753889;XP_032753900;XP_032753911;XP_032753920;XP_032753929 MAP7 domain-containing protein 1 protein-coding 625935871 Slc4a4 solute carrier family 4 member 4 ENCODES a protein that exhibits identical protein binding (ortholog); sodium:bicarbonate symporter activity (ortholog); symporter activity (ortholog); INVOLVED IN bicarbonate transport (ortholog); metanephric proximal tubule development (ortholog); positive regulation of glycolytic process (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); autosomal recessive proximal renal tubular acidosis (ortholog); cataract (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell surface (ortholog); membrane (ortholog) 11 2384266 2715917 + 22301074;30032202 116912197 MODEL JAAIVD010000006;XM_032916131 XP_032772022 electrogenic sodium bicarbonate cotransporter 1 protein-coding 625935902 Col6a3 collagen type VI alpha 3 chain INVOLVED IN neuron apoptotic process (ortholog); phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); response to glucose (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH autosomal recessive distal hereditary motor neuronopathy (ortholog); Bethlem myopathy (ortholog); Bethlem myopathy 1A (ortholog); FOUND IN collagen trimer (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) 4 162773965 162853191 - 22301074 116899630 MODEL JAAIVD010000003;XM_032901603 XP_032757494 collagen alpha-3(VI) chain protein-coding 625935949 LOC116888098 nuclear receptor subfamily 5 group A member 2-like X 98078155 98092002 + 116888098 MODEL JAAIVD010000014 pseudo 625935950 Hoxa4 homeobox A4 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic skeletal system morphogenesis (ortholog); FOUND IN nuclear body (ortholog) 6 88870945 88873021 + 22301074;30032202 116903806 MODEL JAAIVD010000024;XM_032906507 XP_032762398 homeobox protein Hox-A4 protein-coding 625935956 Defb130b defensin beta 130B FOUND IN cytosol (ortholog) 12 61370937 61374143 - 30032202 116913122 MODEL JAAIVD010000007;XM_032917278 XP_032773169 beta-defensin 130B protein-coding 625935961 LOC116905740 60S ribosomal protein L11-like 7 81550090 81550620 - 116905740 MODEL JAAIVD010000026 pseudo 625935962 Ctdp1 CTD phosphatase subunit 1 ENCODES a protein that exhibits RNA polymerase II CTD heptapeptide repeat phosphatase activity (ortholog); Tat protein binding (ortholog); TFIIF-class transcription factor complex binding (ortholog); INVOLVED IN exit from mitosis (ortholog); host-mediated activation of viral transcription (ortholog); negative regulation of cell growth involved in cardiac muscle cell development (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); Congenital Cataracts, Facial Dysmorphism, and Neuropathy (ortholog); FOUND IN centrosome (ortholog); midbody (ortholog); nucleoplasm (ortholog) 15 51760106 51801640 + 22301074;30032202 116884295 MODEL JAAIVD010000010;XM_032885393 XP_032741284 RNA polymerase II subunit A C-terminal domain phosphatase protein-coding 625935977 LOC116897524 small nucleolar RNA SNORA48 3 148016842 148016989 + 116897524 MODEL JAAIVD010000012;XR_004387540 snorna 625935980 LOC116888037 fructose-bisphosphate aldolase A-like X 84546343 84549483 - 116888037 MODEL JAAIVD010000014 pseudo 625935981 Akap14 A-kinase anchoring protein 14 ENCODES a protein that exhibits protein kinase A binding (ortholog); protein kinase A regulatory subunit binding (ortholog); INVOLVED IN spermatogenesis (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; FOUND IN axoneme (ortholog); cAMP-dependent protein kinase complex (ortholog); sperm fibrous sheath (ortholog) X 103327503 103343473 - 30032202 116888557 MODEL JAAIVD010000014;XM_032889863 XP_032745754 A-kinase anchor protein 14 protein-coding 625935991 LOC116896105 succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial-like 3 2327571 2328329 + 116896105 MODEL JAAIVD010000012 pseudo 625935992 LOC116888876 small ubiquitin-related modifier 2-like 1 107903942 107904244 + 30032202 116888876 MODEL JAAIVD010000025;XM_032890143 XP_032746034 protein-coding 625935996 LOC116894859 U6 spliceosomal RNA 2 185869339 185869445 + 116894859 MODEL JAAIVD010000001;XR_004387073 snrna 625935999 Olfm2 olfactomedin 2 INVOLVED IN locomotory behavior (ortholog); neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); positive regulation of smooth muscle cell differentiation (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); cytoplasm (ortholog); extracellular region (ortholog) 8 16934731 17010976 - 30032202 116906706 MODEL JAAIVD010000027;XM_032909510;XM_032909511 XP_032765401;XP_032765402 noelin-2 protein-coding 625936012 Defb136 defensin beta 136 ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); antifungal innate immune response (ortholog); defense response to Gram-negative bacterium (ortholog); ASSOCIATED WITH thoracic aortic aneurysm (ortholog) 12 61315623 61316667 - 22301074;30032202 116913144 MODEL JAAIVD010000007;XM_032917349 XP_032773240 beta-defensin 136 protein-coding 625936016 Znf654 zinc finger protein 654 7 109588116 109653049 + 30032202 116905340 MODEL JAAIVD010000026;XM_032908238 XP_032764129 protein-coding 625936029 Rnf183 ring finger protein 183 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway (ortholog); protein autoubiquitination (ortholog); protein polyubiquitination (ortholog); FOUND IN cis-Golgi network membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 1 91107043 91108075 + 30032202 116888409 MODEL JAAIVD010000025;XM_032889686 XP_032745577 E3 ubiquitin-protein ligase RNF183 protein-coding 625936033 LOC116905732 voltage-dependent anion-selective channel protein 1-like 7 78936034 78936978 + 116905732 MODEL JAAIVD010000026 pseudo 625936034 LOC116908325 U6 spliceosomal RNA 8 113963625 113963726 - 116908325 MODEL JAAIVD010000027;XR_004388882 snrna 625936037 LOC116912592 high mobility group protein B3-like 11 76960962 76965921 + 30032202 116912592 MODEL JAAIVD010000006;XM_032916712 XP_032772603 protein-coding 625936046 Klhl20 kelch like family member 20 ENCODES a protein that exhibits type II interferon binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN Golgi to endosome transport (ortholog); negative regulation of apoptotic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH intellectual disability (ortholog); Neurodevelopmental Disorders (ortholog); prostate cancer (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 10 40384454 40428780 - 22301074 116911120 MODEL JAAIVD010000005;XM_032914966;XM_032914967;XR_004389315 XP_032770857;XP_032770858 kelch-like protein 20 protein-coding 625936069 LOC116903721 CLK4-associating serine/arginine rich protein-like 6 81607522 81609114 + 116903721 MODEL JAAIVD010000024;XM_032906399;XM_032906400;XM_032906401 XP_032762290;XP_032762291;XP_032762292 uncharacterized protein LOC116903721 protein-coding 625936082 LOC116895502 eukaryotic translation initiation factor 4E-like 1 78737189 78737830 - 116895502 MODEL JAAIVD010000025 pseudo 625936083 Cdh2 cadherin 2 ENCODES a protein that exhibits alpha-catenin binding (ortholog); beta-catenin binding (ortholog); calcium ion binding (ortholog); INVOLVED IN blood vessel morphogenesis (ortholog); brain morphogenesis (ortholog); calcium-dependent cell-cell adhesion (ortholog); PARTICIPATES IN cadherin mediated signaling pathway; fibroblast growth factor signaling pathway; N-cadherin signaling pathway; ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); agenesis of corpus callosum, cardiac, ocular, and genital syndrome (ortholog); Animal Disease Models (ortholog); FOUND IN adherens junction (ortholog); apical plasma membrane (ortholog); apicolateral plasma membrane (ortholog) 15 27138853 27350424 + 22301074;30032202 116884434 MODEL JAAIVD010000010;XM_032885522 XP_032741413 cadherin-2 protein-coding 625936103 Pierce2 piercer of microtubule wall 2 INVOLVED IN axoneme assembly (ortholog); cilium movement (ortholog); determination of left/right symmetry (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); sperm flagellum (ortholog) 8 67316381 67321040 - 22301074;30032202 116908290 MODEL JAAIVD010000027;XM_032911552 XP_032767443 C8H15orf65 chromosome 8 C15orf65 homolog;uncharacterized protein C15orf65 homolog protein-coding 625936109 Edaradd EDAR associated via death domain INVOLVED IN hair follicle development (ortholog); odontogenesis of dentin-containing tooth (ortholog); positive regulation of non-canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH ectodermal dysplasia (ortholog); ectodermal dysplasia 10A (ortholog); ectodermal dysplasia 10B (ortholog) 14 40817269 40846966 - 22301074 116883749 MODEL JAAIVD010000009;XM_032884993 XP_032740884 EDAR associated death domain;ectodysplasin-A receptor-associated adapter protein protein-coding 625936118 LOC116914997 calcium-binding mitochondrial carrier protein Aralar2-like 13 28615012 28781419 + 116914997 MODEL JAAIVD010000008 pseudo 625936119 Tmem223 transmembrane protein 223 ENCODES a protein that exhibits mitochondrial ribosome binding (ortholog); INVOLVED IN mitochondrial respiratory chain complex IV assembly (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 2 9171267 9172678 - 30032202 116890930 MODEL JAAIVD010000001;XM_032891573 XP_032747464 protein-coding 625936125 LOC116904244 ribosome biogenesis protein NSA2 homolog 6 157917366 157918129 - 116904244 MODEL JAAIVD010000024 pseudo 625936126 Rad51d RAD51 paralog D ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); ATP-dependent DNA damage sensor activity (ortholog); four-way junction DNA binding (ortholog); INVOLVED IN chromosome organization (ortholog); DNA damage response (ortholog); DNA strand invasion (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; ASSOCIATED WITH Chromosome Deletion (ortholog); hereditary breast ovarian cancer syndrome (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN centrosome (ortholog); chromosome, telomeric region (ortholog); cytoplasm (ortholog) 9 87625302 87644249 + 22301074;30032202 116910051 MODEL JAAIVD010000002;XM_032913848;XM_032913849;XM_032913850;XM_032913851 XP_032769739;XP_032769740;XP_032769741;XP_032769742 DNA repair protein RAD51 homolog 4 protein-coding 625936147 LOC116906430 small nucleolar RNA SNORA48 7 49933910 49934050 + 116906430 MODEL JAAIVD010000026;XR_004388691 snorna 625936150 LOC116914800 annexin A8 13 9851902 9867116 + 22301074;30032202 116914800 MODEL JAAIVD010000008;XM_032919251 XP_032775142 protein-coding 625936166 Pcsk5 proprotein convertase subtilisin/kexin type 5 ENCODES a protein that exhibits endopeptidase activity (ortholog); endopeptidase inhibitor activity (ortholog); peptidase activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); cardiac septum development (ortholog); cellular response to platelet-derived growth factor stimulus (ortholog); ASSOCIATED WITH amenorrhea (ortholog); Anorectal Malformations (ortholog); bone development disease (ortholog); FOUND IN extracellular region (ortholog); Golgi apparatus (ortholog); Golgi medial cisterna (ortholog) 2 17525179 17934302 - 22301074;30032202 116891013 MODEL JAAIVD010000001;XM_032891692;XM_032891693 XP_032747583;XP_032747584 protein-coding 625936211 Birc5 baculoviral IAP repeat containing 5 ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity involved in apoptotic process (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN cell division (ortholog); cellular response to ethanol (ortholog); cellular response to stem cell factor stimulus (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute megakaryocytic leukemia (ortholog); acute necrotizing pancreatitis (ortholog); acute pancreatitis (ortholog); FOUND IN apical plasma membrane (ortholog); centriole (ortholog); chromosome passenger complex (ortholog) 9 66204836 66212679 - 116910161 MODEL JAAIVD010000002;XM_032914019 XP_032769910 baculoviral IAP repeat-containing protein 5 protein-coding 625936219 Med8 mediator complex subunit 8 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN protein ubiquitination (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; FOUND IN mediator complex (ortholog); nucleus (ortholog); ubiquitin ligase complex (ortholog) 1 38611917 38617588 - 22301074;30032202 116897816 MODEL JAAIVD010000025;XM_032899234 XP_032755125 mediator of RNA polymerase II transcription subunit 8 protein-coding 625936230 Pde4c phosphodiesterase 4C ENCODES a protein that exhibits 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); INVOLVED IN negative regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; FOUND IN cilium (ortholog) 13 12988229 12992590 + 22301074;30032202 116914421 MODEL JAAIVD010000008;XM_032918691 XP_032774582 cAMP-specific 3',5'-cyclic phosphodiesterase 4C protein-coding 625936244 Ube2e3 ubiquitin conjugating enzyme E2 E3 ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN protein K11-linked ubiquitination (ortholog); protein K48-linked ubiquitination (ortholog); protein K63-linked ubiquitination (ortholog); FOUND IN nucleus (ortholog) 5 56119013 56176540 + 30032202 116901557 MODEL JAAIVD010000023;XM_032903552;XM_032903553 XP_032759443;XP_032759444 ubiquitin-conjugating enzyme E2 E3 protein-coding 625936257 LOC116900432 olfactory receptor 4C15-like 5 70670634 70671569 - 22301074 116900432 MODEL JAAIVD010000023;XM_032902173 XP_032758064 protein-coding 625936260 Dysf dysferlin ENCODES a protein that exhibits alpha-tubulin binding (ortholog); calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to osmotic stress (ortholog); fat cell differentiation (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2B (ortholog); autosomal recessive nonsyndromic deafness (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); early endosome (ortholog) 6 62040315 62234970 - 22301074;30032202 116903590 MODEL JAAIVD010000024;XM_032906212;XM_032906213;XM_032906214;XM_032906215;XM_032906216;XM_032906217;XM_032906219;XM_032906220;XM_032906221;XM_032906222;XM_032906223;XM_032906224;XM_032906225;XM_032906226;XM_032906227 XP_032762103;XP_032762104;XP_032762105;XP_032762106;XP_032762107;XP_032762108;XP_032762110;XP_032762111;XP_032762112;XP_032762113;XP_032762114;XP_032762115;XP_032762116;XP_032762117;XP_032762118 protein-coding 625936339 LOC116899896 small nucleolar RNA SNORA17 4 98288896 98288977 - 116899896 MODEL JAAIVD010000003 pseudo 625936340 LOC116893080 glutamine-dependent NAD(+) synthetase-like 2 48777727 48783544 - 116893080 MODEL JAAIVD010000001 pseudo 625936341 Ghrh growth hormone releasing hormone ENCODES a protein that exhibits growth hormone-releasing hormone activity (ortholog); growth hormone-releasing hormone receptor binding (ortholog); INVOLVED IN adenohypophysis development (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); autoimmune polyendocrine syndrome type 1 (ortholog); breast cancer (ortholog); FOUND IN axon terminus (ortholog); extracellular region (ortholog); perikaryon (ortholog) 5 136673159 136693103 - 22301074;30032202 116900727 MODEL JAAIVD010000023;XM_032902433;XM_032902434;XM_032902435 XP_032758324;XP_032758325;XP_032758326 somatoliberin protein-coding 625936358 LOC116899769 U6 spliceosomal RNA 4 23843814 23843914 + 116899769 MODEL JAAIVD010000003 pseudo 625936359 LOC116908925 keratin-associated protein 4-12-like 9 54463269 54463805 - 22301074;30032202 116908925 MODEL JAAIVD010000002;XM_032912383;XM_032912385 XP_032768274;XP_032768276 keratin-associated protein 4-6-like protein-coding 625936365 Acsf3 acyl-CoA synthetase family member 3 ENCODES a protein that exhibits malonyl-CoA synthetase activity (ortholog); very long-chain fatty acid-CoA ligase activity (ortholog); INVOLVED IN fatty acid biosynthetic process (ortholog); fatty acid metabolic process (ortholog); malonate catabolic process (ortholog); ASSOCIATED WITH combined malonic and methylmalonic acidemia (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) 17 42410203 42449632 + 30032202 116886338 MODEL JAAIVD010000011;XM_032887791;XM_032887792 XP_032743682;XP_032743683 malonate--CoA ligase ACSF3, mitochondrial protein-coding 625936382 Tmprss3 transmembrane serine protease 3 ENCODES a protein that exhibits sodium channel regulator activity (ortholog); INVOLVED IN intracellular sodium ion homeostasis (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 8 (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); neuronal cell body (ortholog) 18 2680961 2700434 + 22301074;30032202 116887229 MODEL JAAIVD010000013;XM_032888791 XP_032744682 transmembrane protease serine 3 protein-coding 625936398 LOC116914140 small nucleolar RNA SNORA17 12 83240920 83241050 - 116914140 MODEL JAAIVD010000007;XR_004389699 snorna 625936401 LOC116904423 phosphoglycerate kinase 1-like 6 109596667 109598261 - 116904423 MODEL JAAIVD010000024 pseudo 625936402 LOC116908004 U8 snoRNA-decapping enzyme-like 8 96438019 96439685 - 30032202 116908004 MODEL JAAIVD010000027;XM_032911261 XP_032767152 protein-coding 625936409 Dnah9 dynein axonemal heavy chain 9 INVOLVED IN cerebrospinal fluid circulation (ortholog); cilium movement (ortholog); mucociliary clearance (ortholog); ASSOCIATED WITH Cardiovascular Abnormalities (ortholog); congenital heart disease (ortholog); genetic disease (ortholog); FOUND IN 9+2 motile cilium (ortholog); axoneme (ortholog); centriole (ortholog) 9 45437131 45780196 - 22301074;30032202 116910516 MODEL JAAIVD010000002;XM_032914418 XP_032770309 dynein heavy chain 9, axonemal protein-coding 625936482 Nmb neuromedin B ENCODES a protein that exhibits neuromedin B receptor binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); arachidonate secretion (ortholog); Leydig cell proliferation (ortholog); ASSOCIATED WITH obesity (ortholog); Pruritus (ortholog); FOUND IN extracellular region (ortholog); neuron projection (ortholog) 2 119332376 119335224 + 22301074;30032202 116894270 MODEL JAAIVD010000001;XM_032895981;XM_032895982 XP_032751872;XP_032751873 neuromedin-B protein-coding 625936494 LOC116914321 cytochrome P450 2D10-like 1 252124838 252129322 - 22301074;30032202 116914321 MODEL JAAIVD010000025;XM_032918553 XP_032774444 protein-coding 625936507 LOC116900332 olfactory receptor 142-like 5 64568431 64569354 - 22301074 116900332 MODEL JAAIVD010000023;XM_032902088 XP_032757979 protein-coding 625936510 LOC116890372 U6 spliceosomal RNA 1 134316657 134316762 - 116890372 MODEL JAAIVD010000025;XR_004386587 snrna 625936513 Sh3rf2 SH3 domain containing ring finger 2 ENCODES a protein that exhibits phosphatase binding (ortholog); protein phosphatase 1 binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of JNK cascade (ortholog); negative regulation of protein ubiquitination (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 15 3227129 3332798 + 30032202 116884688 MODEL JAAIVD010000010;XM_032885871 XP_032741762 E3 ubiquitin-protein ligase SH3RF2 protein-coding 625936526 LOC116888865 heterogeneous nuclear ribonucleoprotein A3-like X 113486519 113487587 + 116888865 MODEL JAAIVD010000014 pseudo 625936527 LOC116896230 60S ribosomal protein L10-like 3 25356008 25356525 - 22301074;30032202 116896230 MODEL JAAIVD010000012;XM_032897292 XP_032753183 protein-coding 625936532 LOC116889060 uncharacterized LOC116889060 X 14043962 14054206 + 116889060 MODEL JAAIVD010000014;XR_004386363 ncrna 625936537 Klf4 KLF transcription factor 4 ENCODES a protein that exhibits beta-catenin binding (ortholog); chromatin DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cell differentiation (ortholog); cellular response to endothelin (ortholog); ASSOCIATED WITH Carotid Artery Injuries (ortholog); Congenital Abnormalities (ortholog); congenital heart disease (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); euchromatin (ortholog) 1 96004619 96009625 + 30032202;37952156 116901744 MODEL JAAIVD010000025;XM_032903884 XP_032759775 Krueppel-like factor 4;Kruppel like factor 4 protein-coding 625936546 LOC116912921 U6 spliceosomal RNA 11 7153951 7154057 - 116912921 MODEL JAAIVD010000006;XR_004389494 snrna 625936549 C1H12orf42 chromosome 1 C12orf42 homolog 1 166223119 166352832 + 116911593 MODEL JAAIVD010000025;XM_032915592 XP_032771483 uncharacterized protein C12orf42 homolog protein-coding 625936557 Cnp 2'',3''-cyclic nucleotide 3'' phosphodiesterase ENCODES a protein that exhibits 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity (ortholog); cyclic nucleotide binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); axonogenesis (ortholog); forebrain development (ortholog); ASSOCIATED WITH achondroplasia (ortholog); alcoholic liver cirrhosis (ortholog); Alzheimer's disease (ortholog); FOUND IN cell projection (ortholog); cytoplasm (ortholog); extracellular region (ortholog) 9 59876598 59883302 + 22301074;30032202 116909161 MODEL JAAIVD010000002;XM_032912648;XM_032912649;XM_032912650 XP_032768539;XP_032768540;XP_032768541 2',3'-cyclic nucleotide 3' phosphodiesterase;2',3'-cyclic-nucleotide 3'-phosphodiesterase protein-coding 625936571 Cmtm4 CKLF like MARVEL transmembrane domain containing 4 INVOLVED IN glycoprotein biosynthetic process (ortholog); immune response (ortholog); intracellular protein localization (ortholog) 17 12636343 12680309 - 22301074 116886671 MODEL JAAIVD010000011;XM_032888163 XP_032744054 CKLF-like MARVEL transmembrane domain-containing protein 4 protein-coding 625936579 Arhgef9 Cdc42 guanine nucleotide exchange factor 9 INVOLVED IN receptor clustering (ortholog); regulation of postsynaptic specialization assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); developmental and epileptic encephalopathy 1 (ortholog); FOUND IN cell cortex (ortholog); cytosol (ortholog); GABA-ergic synapse (ortholog) X 53257613 53338173 + 22301074 116889388 MODEL JAAIVD010000014;XM_032890490 XP_032746381 rho guanine nucleotide exchange factor 9 protein-coding 625936593 Pten phosphatase and tensin homolog ENCODES a protein that exhibits anaphase-promoting complex binding (ortholog); beta-catenin binding (ortholog); enzyme binding (ortholog); INVOLVED IN adult behavior (ortholog); angiogenesis (ortholog); apoptotic process (ortholog); PARTICIPATES IN altered phosphatidylinositol 3-kinase signaling pathway; altered phosphatidylinositol 3-kinase-Akt signaling pathway; endometrial cancer pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute megakaryocytic leukemia (ortholog); acute myocardial infarction (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) 2 32794056 32865407 + 30032202 116891096 MODEL JAAIVD010000001;XM_032891811 XP_032747702 phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN protein-coding 625936605 LOC116889581 U6 spliceosomal RNA X 59518245 59518351 - 116889581 MODEL JAAIVD010000014;XR_004386497 snrna 625936608 Bmi1 BMI1 proto-oncogene, polycomb ring finger ENCODES a protein that exhibits chromatin binding (ortholog); promoter-specific chromatin binding (ortholog); RING-like zinc finger domain binding (ortholog); INVOLVED IN brain development (ortholog); cellular response to dexamethasone stimulus (ortholog); cellular response to interleukin-1 (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute pancreatitis (ortholog); chronic pancreatitis (ortholog); FOUND IN heterochromatin (ortholog); nuclear body (ortholog); nucleus (ortholog) 14 5349014 5363043 - 30032202 116883346 MODEL JAAIVD010000009;XM_032884423;XM_032884424;XM_032884425 XP_032740314;XP_032740315;XP_032740316 polycomb complex protein BMI-1 protein-coding 625936632 LOC116885052 small nucleolar RNA SNORA17 15 54408164 54408289 - 116885052 MODEL JAAIVD010000010;XR_004385937 snorna 625936635 LOC116889896 polycomb group RING finger protein 2-like 1 159919748 159920759 - 30032202 116889896 MODEL JAAIVD010000025;XM_032890719 XP_032746610 protein-coding 625936638 LOC116895207 forkhead box protein E1-like 3 2406628 2407655 - 116895207 MODEL JAAIVD010000012 pseudo 625936639 LOC116912433 ribonucleoside-diphosphate reductase large subunit-like 11 66576315 66578654 + 116912433 MODEL JAAIVD010000006 pseudo 625936640 LOC116901081 60S ribosomal protein L27a-like 5 145690449 145690913 + 30032202 116901081 MODEL JAAIVD010000023;XM_032902646 XP_032758537 protein-coding 625936643 Adap2 ArfGAP with dual PH domains 2 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); inositol 1,3,4,5 tetrakisphosphate binding (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); INVOLVED IN heart development (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial envelope (ortholog); plasma membrane (ortholog) 9 90246575 90273998 - 22301074;30032202 116910162 MODEL JAAIVD010000002;XM_032914020 XP_032769911 arf-GAP with dual PH domain-containing protein 2 protein-coding 625936658 Pms1 PMS1 homolog 1, mismatch repair system component ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN mismatch repair (ortholog); response to xenobiotic stimulus (ortholog); PARTICIPATES IN altered mismatch repair pathway; colorectal cancer pathway; mismatch repair pathway; ASSOCIATED WITH breast cancer (ortholog); Colonic Polyps (ortholog); colorectal cancer (ortholog); FOUND IN nucleus (ortholog) 4 121982929 122070659 + 22301074;30032202 116899361 MODEL JAAIVD010000003;XM_032901070;XM_032901071;XM_032901072 XP_032756961;XP_032756962;XP_032756963 PMS1 protein homolog 1 protein-coding 625936681 LOC116907436 60S ribosomal protein L27-like 8 96325562 96325962 - 116907436 MODEL JAAIVD010000027 pseudo 625936682 Asic5 acid sensing ion channel subunit family member 5 ENCODES a protein that exhibits bile acid-gated sodium channel activity (ortholog); ligand-gated sodium channel activity (ortholog); proton channel activity (ortholog); INVOLVED IN neuronal action potential (ortholog); sodium ion import across plasma membrane (ortholog); sodium ion transmembrane transport (ortholog); ASSOCIATED WITH Habitual Abortions (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog) 3 71543506 71572009 - 22301074;30032202 116895446 MODEL JAAIVD010000012;XM_032896723 XP_032752614 acid-sensing ion channel 5 protein-coding 625936697 LOC116897927 olfactory receptor Olfr180-like 4 42750862 42751791 - 22301074;30032202 116897927 MODEL JAAIVD010000003;XM_032899328 XP_032755219 protein-coding 625936700 LOC116901754 twinfilin-2-like 5 91921469 91922911 - 116901754 MODEL JAAIVD010000023 pseudo 625936701 Cebpa CCAAT enhancer binding protein alpha ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN acute-phase response (ortholog); animal organ regeneration (ortholog); brown fat cell differentiation (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); Acute-Phase Reaction (ortholog); FOUND IN CHOP-C/EBP complex (ortholog); nuclear matrix (ortholog); nucleolus (ortholog) 2 163560712 163563479 - 30032202 116892275 MODEL JAAIVD010000001;XM_032893864 XP_032749755 CCAAT/enhancer-binding protein alpha protein-coding 625936706 LOC116912984 U1 spliceosomal RNA 11 80993598 80993745 - 116912984 MODEL JAAIVD010000006 pseudo 625936707 Snapc2 small nuclear RNA activating complex polypeptide 2 PARTICIPATES IN RNA polymerase III transcription pathway; FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) 16 2386180 2389382 + 22301074;30032202 116885218 MODEL JAAIVD010000004;XM_032886454 XP_032742345 snRNA-activating protein complex subunit 2 protein-coding 625936716 LOC116894117 olfactory receptor 52N4-like 2 103737202 103738167 - 22301074 116894117 MODEL JAAIVD010000001;XM_032895835 XP_032751726 protein-coding 625936719 LOC116906188 serine protease inhibitor A3N-like 7 115355260 115359578 + 116906188 MODEL JAAIVD010000026 pseudo 625936720 LOC116909969 olfactory receptor 1361-like 9 33617264 33618211 + 22301074;30032202 116909969 MODEL JAAIVD010000002;XM_032913747 XP_032769638 protein-coding 625936723 LOC116890066 ribosomal L1 domain-containing protein 1-like 1 214755895 214756866 + 116890066 MODEL JAAIVD010000025 pseudo 625936724 Vax1 ventral anterior homeobox 1 ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN axon guidance (ortholog); brain development (ortholog); camera-type eye development (ortholog); ASSOCIATED WITH microphthalmia (ortholog); syndromic microphthalmia 11 (ortholog); FOUND IN nucleus (ortholog) 2 56938241 56943333 + 22301074;30032202 116893835 MODEL JAAIVD010000001;XM_032895551 XP_032751442 protein-coding 625936730 Mis12 MIS12 kinetochore complex component INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); chromosome segregation (ortholog); kinetochore assembly (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN kinetochore (ortholog); MIS12/MIND type complex (ortholog); nucleus (ortholog) 9 50642360 50651294 + 22301074;30032202 116908638 MODEL JAAIVD010000002;XM_032911894;XM_032911895;XR_004389005 XP_032767785;XP_032767786 protein MIS12 homolog protein-coding 625936742 LOC116888131 SR-related and CTD-associated factor 8-like X 105786349 105794398 + 116888131 MODEL JAAIVD010000014 pseudo 625936743 LOC116910486 cytochrome c, somatic-like 9 73834578 73834931 + 116910486 MODEL JAAIVD010000002 pseudo 625936744 LOC116904444 uncharacterized LOC116904444 6 124294562 124369622 + 116904444 MODEL JAAIVD010000024 pseudo 625936745 LOC116898506 olfactory receptor 6C2-like 4 129023708 129024663 - 116898506 MODEL JAAIVD010000003 pseudo 625936746 LOC116902949 vomeronasal type-1 receptor 98 6 124065324 124066274 + 22301074;30032202 116902949 MODEL JAAIVD010000024;XM_032905275 XP_032761166 protein-coding 625936750 Angptl8 angiopoietin like 8 INVOLVED IN cell maturation (ortholog); fat cell differentiation (ortholog); glucose metabolic process (ortholog); FOUND IN extracellular region (ortholog) 8 18100024 18102072 + 30032202 116906818 MODEL JAAIVD010000027;XM_032909698;XR_004388772 XP_032765589 angiopoietin-like protein 8 protein-coding 625936760 Map2k2 mitogen-activated protein kinase kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); MAP kinase kinase activity (ortholog); MAP kinase scaffold activity (ortholog); INVOLVED IN epithelial cell proliferation involved in lung morphogenesis (ortholog); ERBB2-ERBB3 signaling pathway (ortholog); ERK1 and ERK2 cascade (ortholog); PARTICIPATES IN adenosine signaling pathway; ceramide signaling pathway; endothelin signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); breast cancer (ortholog); cardiofaciocutaneous syndrome (ortholog); FOUND IN cell cortex (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) 1 153764327 153784203 - 22301074 116904575 MODEL JAAIVD010000025;XM_032907375;XM_032907381 XP_032763266;XP_032763272 dual specificity mitogen-activated protein kinase kinase 2 protein-coding 625936779 Dnaaf1 dynein axonemal assembly factor 1 ENCODES a protein that exhibits dynein complex binding (ortholog); INVOLVED IN axonemal dynein complex assembly (ortholog); cilium assembly (ortholog); cilium movement (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Kartagener syndrome (ortholog); primary ciliary dyskinesia (ortholog); FOUND IN axoneme (ortholog) 17 39222766 39242143 + 22301074;30032202 116886391 MODEL JAAIVD010000011;XM_032887858 XP_032743749 dynein assembly factor 1, axonemal protein-coding 625936794 LOC116898374 60S ribosomal protein L35a-like 4 65261016 65261449 - 116898374 MODEL JAAIVD010000003 pseudo 625936795 LOC116883910 40S ribosomal protein SA-like 14 742841 743581 + 116883910 MODEL JAAIVD010000009 pseudo 625936796 LOC116888900 eukaryotic peptide chain release factor GTP-binding subunit ERF3B-like X 53754972 53757466 + 22301074;30032202 116888900 MODEL JAAIVD010000014;XM_032890159 XP_032746050 protein-coding 625936801 Klf15 KLF transcription factor 15 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cardiac muscle hypertrophy in response to stress (ortholog); cellular response to endothelin (ortholog); glial cell differentiation (ortholog); ASSOCIATED WITH aortic aneurysm (ortholog); Cardiac Fibrosis (ortholog); endomyocardial fibrosis (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 6 56445069 56457768 - 30032202 116903508 MODEL JAAIVD010000024;XM_032906113;XM_032906114 XP_032762004;XP_032762005 Krueppel-like factor 15;Kruppel like factor 15 protein-coding 625936813 Col23a1 collagen type XXIII alpha 1 chain ENCODES a protein that exhibits heparin binding (ortholog); identical protein binding (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); Familial Prostate Cancer (ortholog); pre-malignant neoplasm (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog) 9 33880474 34170888 + 116910514 MODEL JAAIVD010000002;XM_032914417 XP_032770308 collagen alpha-1(XXIII) chain protein-coding 625936846 LOC116900538 olfactory receptor 4K3-like 5 89602935 89608245 - 22301074 116900538 MODEL JAAIVD010000023;XM_032902264;XM_032902265 XP_032758155;XP_032758156 protein-coding 625936853 LOC116897773 histone H3.3A-like 4 7864121 7866640 + 116897773 MODEL JAAIVD010000003 pseudo 625936854 LOC116883224 serpin B6-like 14 52384685 52388507 - 30032202 116883224 MODEL JAAIVD010000009;XM_032884239 XP_032740130 protein-coding 625936860 LOC116908300 40S ribosomal protein S8-like 8 27707648 27708199 - 116908300 MODEL JAAIVD010000027 pseudo 625936861 LOC116894753 UPF0462 protein C4orf33 homolog 2 151220059 151221083 - 116894753 MODEL JAAIVD010000001 pseudo 625936862 LOC116905870 alpha-1-antitrypsin 1-6-like 7 114954555 114960720 - 30032202 116905870 MODEL JAAIVD010000026;XM_032908859 XP_032764750 protein-coding 625936872 Cnot2 CCR4-NOT transcription complex subunit 2 ENCODES a protein that exhibits poly(A)-specific ribonuclease activity (ortholog); transcription corepressor binding (ortholog); INVOLVED IN negative regulation of intracellular estrogen receptor signaling pathway (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of cytoplasmic mRNA processing body assembly (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH genetic disease (ortholog); Intellectual Developmental Disorder with Nasal Speech, Dysmorphic Facies, and Variable Skeletal Anomalies (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN CCR4-NOT complex (ortholog); cytoplasm (ortholog) 1 194637396 194728411 - 22301074;30032202 116909154 MODEL JAAIVD010000025;XM_032912642;XM_032912651;XM_032912658;XM_032912664;XM_032912673 XP_032768533;XP_032768542;XP_032768549;XP_032768555;XP_032768564 protein-coding 625936901 LOC116911990 PRAME family member 20-like 11 48547173 48553429 + 22301074;30032202 116911990 MODEL JAAIVD010000006;XM_032915896 XP_032771787 protein-coding 625936908 Ngly1 N-glycanase 1 ENCODES a protein that exhibits peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity (ortholog); INVOLVED IN glycoprotein catabolic process (ortholog); ASSOCIATED WITH congenital disorder of deglycosylation (ortholog); congenital disorder of deglycosylation 1 (ortholog); Developmental Disabilities (ortholog); FOUND IN cytoplasm (ortholog) 12 85622419 85673966 + 22301074;30032202 116913077 MODEL JAAIVD010000007;XM_032917209;XM_032917210 XP_032773100;XP_032773101 peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase protein-coding 625936927 Mtmr14 myotubularin related protein 14 ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity (ortholog); phosphatidylinositol-3-phosphate phosphatase activity (ortholog); ASSOCIATED WITH autosomal dominant centronuclear myopathy (ortholog); centronuclear myopathy 1 (ortholog); congenital structural myopathy (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog); ruffle (ortholog) 6 33253318 33296085 - 22301074;30032202 116903424 MODEL JAAIVD010000024;XM_032905957;XM_032905958;XM_032905959;XM_032905960;XM_032905961;XM_032905962;XM_032905963 XP_032761848;XP_032761849;XP_032761850;XP_032761851;XP_032761852;XP_032761853;XP_032761854 myotubularin-related protein 14 protein-coding 625936966 LOC116903206 uncharacterized LOC116903206 6 18716981 18721364 - 116903206 MODEL JAAIVD010000024;XR_004388259 ncrna 625936970 LOC116884137 U7 small nuclear RNA 14 40961397 40961459 + 116884137 MODEL JAAIVD010000009;XR_004385858 snrna 625936973 LOC116884075 small nucleolar RNA SNORA17 14 24837325 24837460 - 116884075 MODEL JAAIVD010000009;XR_004385821 snorna 625936976 Trim40 tripartite motif containing 40 INVOLVED IN negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of protein catabolic process (ortholog); negative regulation of protein localization to nucleus (ortholog); ASSOCIATED WITH irritant dermatitis (ortholog); FOUND IN IkappaB kinase complex (ortholog) 18 9852521 9862235 - 22301074 116887713 MODEL JAAIVD010000013;XM_032889312 XP_032745203 tripartite motif-containing protein 40 protein-coding 625936986 Plxnb2 plexin B2 ENCODES a protein that exhibits semaphorin receptor activity (ortholog); signaling receptor activity (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN brain development (ortholog); excitatory synapse assembly (ortholog); homophilic cell-cell adhesion (ortholog); FOUND IN plasma membrane (ortholog) 1 258459406 258484980 - 22301074;30032202 116915022 MODEL JAAIVD010000025;XM_032919433 XP_032775324 plexin-B2 protein-coding 625937029 Fam149b1 family with sequence similarity 149 member B1 INVOLVED IN cilium assembly (ortholog); protein localization to cilium (ortholog); ASSOCIATED WITH Joubert syndrome (ortholog); Joubert Syndrome 36 (ortholog) 12 90144514 90182733 + 30032202 116914067 MODEL JAAIVD010000007;XM_032918370;XM_032918371;XM_032918372;XM_032918373;XM_032918374;XM_032918375 XP_032774261;XP_032774262;XP_032774263;XP_032774264;XP_032774265;XP_032774266 protein FAM149B1 protein-coding 625937064 Trnai-aau transfer RNA isoleucine (anticodon AAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 1 39718080 39718153 + 116890652 MODEL JAAIVD010000025 trna 625937065 LOC116908094 uncharacterized LOC116908094 8 109589792 109592969 + 116908094 MODEL JAAIVD010000027;XR_004388874 ncrna 625937070 LOC116899957 cation-dependent mannose-6-phosphate receptor-like 5 39377492 39385491 + 116899957 MODEL JAAIVD010000023 pseudo 625937071 Klf17 KLF transcription factor 17 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN gamete generation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog) 1 39246212 39251663 + 116914391 MODEL JAAIVD010000025;XM_032919019 XP_032774910 Krueppel-like factor 17;Kruppel like factor 17 protein-coding 625937075 Rhoc ras homolog family member C INVOLVED IN apical junction assembly (ortholog); mitotic cytokinesis (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH breast cancer (ortholog); Myocardial Ischemia (ortholog); Neoplasm Metastasis (ortholog); FOUND IN cleavage furrow (ortholog); nucleus (ortholog); plasma membrane (ortholog) 3 53319981 53326207 - 22301074;30032202 116896427 MODEL JAAIVD010000012;XM_032897574;XM_032897575 XP_032753465;XP_032753466 rho-related GTP-binding protein RhoC protein-coding 625937087 LOC116905435 immunoglobulin heavy variable 3-73-like 7 122425724 122426184 - 116905435 MODEL JAAIVD010000026 pseudo 625937088 LOC116897584 U1 spliceosomal RNA 3 114046339 114046494 - 116897584 MODEL JAAIVD010000012;XR_004387590 snrna 625937091 LOC116897075 cytochrome c, somatic-like 3 156828374 156829254 - 22301074;30032202 116897075 MODEL JAAIVD010000012;XM_032898701 XP_032754592 protein-coding 625937096 LOC116887414 RT1 class I histocompatibility antigen, AA alpha chain-like 18 8522108 8524940 - 116887414 MODEL JAAIVD010000013;XR_004386211 pseudo 625937104 LOC116910152 disabled homolog 1-like 9 85650176 85653446 + 116910152 MODEL JAAIVD010000002 pseudo 625937105 LOC116893186 olfactory receptor 52N2-like 2 103833986 103837753 - 116893186 MODEL JAAIVD010000001 pseudo 625937106 Pgpep1 pyroglutamyl-peptidase I ENCODES a protein that exhibits peptidase activity (ortholog); INVOLVED IN protein catabolic process (ortholog); ASSOCIATED WITH prostate cancer (ortholog) 13 12900955 12910978 - 22301074;30032202 116914758 MODEL JAAIVD010000008;XM_032919208;XM_032919209;XM_032919210 XP_032775099;XP_032775100;XP_032775101 pyroglutamyl-peptidase 1 protein-coding 625937121 Rps12 ribosomal protein S12 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN positive regulation of canonical Wnt signaling pathway (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Hypertriglyceridemia (ortholog); FOUND IN cytosol (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog) 2 209856443 209858643 - 22301074;30032202 116892942 MODEL JAAIVD010000001;XM_032894892 XP_032750783 40S ribosomal protein S12 protein-coding 625937131 LOC116890278 interferon-induced transmembrane protein 2-like 1 20638922 20639774 + 116890278 MODEL JAAIVD010000025 pseudo 625937132 Ssu72 SSU72 homolog, RNA polymerase II CTD phosphatase ENCODES a protein that exhibits RNA polymerase II CTD heptapeptide repeat phosphatase activity (ortholog); INVOLVED IN co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH autosomal recessive osteopetrosis 4 (ortholog); liver disease (ortholog) 1 4894437 4924214 - 22301074;30032202 116891744 MODEL JAAIVD010000025;XM_032893056 XP_032748947 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 protein-coding 625937141 LOC116903957 uncharacterized LOC116903957 6 28832309 28834222 + 116903957 MODEL JAAIVD010000024 pseudo 625937142 LOC116915177 U6 spliceosomal RNA 13 53047149 53047250 - 116915177 MODEL JAAIVD010000008;XR_004389836 snrna 625937145 LOC116890437 U7 small nuclear RNA 1 235307396 235307461 - 116890437 MODEL JAAIVD010000025 pseudo 625937146 LOC116909961 high mobility group protein B1-like 9 57528454 57529270 - 116909961 MODEL JAAIVD010000002;XR_004389116 pseudo 625937149 LOC116898386 uncharacterized protein C4orf46 homolog 4 72507609 72574023 + 116898386 MODEL JAAIVD010000003 pseudo 625937150 LOC116888992 proteasome subunit beta type-3-like X 12962431 12963601 - 116888992 MODEL JAAIVD010000014 pseudo 625937151 Appl2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN adiponectin-activated signaling pathway (ortholog); cellular response to hepatocyte growth factor stimulus (ortholog); cold acclimation (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); substance-related disorder (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); early phagosome (ortholog) 1 164855509 164907613 + 22301074;30032202 116907499 MODEL JAAIVD010000025;XM_032910498 XP_032766389 DCC-interacting protein 13-beta protein-coding 625937176 Gopc golgi associated PDZ and coiled-coil motif containing ENCODES a protein that exhibits frizzled binding (ortholog); GTPase regulator activity (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of anion channel activity (ortholog); negative regulation of protein localization to cell surface (ortholog); spermatid nucleus differentiation (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); azoospermia (ortholog); epilepsy (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); membrane (ortholog) 18 29586592 29609233 + 30032202 116887669 MODEL JAAIVD010000013;XM_032889264 XP_032745155 Golgi-associated PDZ and coiled-coil motif-containing protein protein-coding 625937182 LOC116894945 small nucleolar RNA Z195/SNORD33/SNORD32 family 2 154417089 154417173 + 116894945 MODEL JAAIVD010000001;XR_004387142 snorna 625937185 Gpr149 G protein-coupled receptor 149 INVOLVED IN antral ovarian follicle growth (ortholog); negative regulation of ovulation (ortholog); preantral ovarian follicle growth (ortholog); ASSOCIATED WITH hypertrophic cardiomyopathy (ortholog) 3 92635923 92693292 + 22301074;30032202 116896829 MODEL JAAIVD010000012;XM_032898311 XP_032754202 probable G-protein coupled receptor 149 protein-coding 625937193 LOC116909047 protein UXT-like 9 37965887 37968885 + 116909047 MODEL JAAIVD010000002 pseudo 625937194 Msi1 musashi RNA binding protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); molecular condensate scaffold activity (ortholog); poly(U) RNA binding (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); response to hormone (ortholog); ASSOCIATED WITH brain infarction (ortholog); brain ischemia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 16 38370700 38397229 - 22301074;30032202 116885357 MODEL JAAIVD010000004;XM_032886631 XP_032742522 RNA-binding protein Musashi homolog 1 protein-coding 625937213 LOC116902921 sorting nexin-11-like 6 113038736 113039516 - 116902921 MODEL JAAIVD010000024 pseudo 625937214 Fcsk fucose kinase ENCODES a protein that exhibits fucokinase activity (ortholog); INVOLVED IN carbohydrate phosphorylation (ortholog); GDP-L-fucose salvage (ortholog); response to dopamine (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructosuria pathway; hereditary fructose intolerance syndrome pathway; ASSOCIATED WITH Congenital Disorder of Glycosylation with Defective Fucosylation (ortholog); Congenital Disorder of Glycosylation with Defective Fucosylation 2 (ortholog); Neurodevelopmental Disorders (ortholog) 17 30588202 30608100 - 22301074;30032202 116886455 MODEL JAAIVD010000011;XM_032887956 XP_032743847 L-fucose kinase protein-coding 625937242 LOC116897305 60S ribosomal protein L37-like 3 205134796 205135082 + 116897305 MODEL JAAIVD010000012 pseudo 625937243 LOC116891102 death effector domain-containing protein-like 2 33862926 33863883 + 116891102 MODEL JAAIVD010000001 pseudo 625937244 LOC116896734 uncharacterized LOC116896734 3 68797808 68800908 + 116896734 MODEL JAAIVD010000012;XR_004387364 ncrna 625937248 Ccdc134 coiled-coil domain containing 134 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); cerebellar granule cell differentiation (ortholog); cerebellum development (ortholog); ASSOCIATED WITH Bone Fractures (ortholog); Liver Neoplasms (ortholog); osteogenesis imperfecta type 22 (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum lumen (ortholog) 1 251858785 251871903 + 116914203 MODEL JAAIVD010000025;XM_032918415 XP_032774306 coiled-coil domain-containing protein 134 protein-coding 625937259 Rfk riboflavin kinase ENCODES a protein that exhibits riboflavin kinase activity (ortholog); INVOLVED IN apoptotic process (ortholog); positive regulation of NAD(P)H oxidase activity (ortholog); reactive oxygen species metabolic process (ortholog); PARTICIPATES IN riboflavin metabolic pathway; ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); mitochondrion (ortholog) 2 17487915 17495341 + 22301074;30032202 116891010 MODEL JAAIVD010000001;XM_032891691 XP_032747582 protein-coding 625937267 LOC116906374 small nucleolar RNA SNORD113/SNORD114 family 7 127245217 127245291 + 116906374 MODEL JAAIVD010000026;XR_004388643 snorna 625937270 Dpcd deleted in primary ciliary dyskinesia homolog (mouse) INVOLVED IN determination of left/right symmetry (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH hydrocephalus (ortholog); primary ciliary dyskinesia (ortholog) 2 45041956 45059320 + 116891228 MODEL JAAIVD010000001;XM_032892075;XM_032892076;XM_032892077 XP_032747966;XP_032747967;XP_032747968 protein DPCD protein-coding 625937288 Arglu1 arginine and glutamate rich 1 ENCODES a protein that exhibits pre-mRNA binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN regulation of alternative mRNA splicing, via spliceosome (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog) 13 75091126 75114549 + 30032202 116914377 MODEL JAAIVD010000008;XM_032918580;XM_032918581 XP_032774471;XP_032774472 arginine and glutamate-rich protein 1 protein-coding 625937299 LOC116907395 olfactory receptor 145-like 8 31572383 31573327 + 22301074;30032202 116907395 MODEL JAAIVD010000027;XM_032910348 XP_032766239 protein-coding 625937302 LOC116909718 uncharacterized LOC116909718 9 67395560 67397873 - 116909718 MODEL JAAIVD010000002;XR_004389092 ncrna 625937306 LOC116895051 small nucleolar RNA SNORA17 2 113592409 113592540 + 116895051 MODEL JAAIVD010000001;XR_004387234 snorna 625937309 Skor1 SKI family transcriptional corepressor 1 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); SMAD binding (ortholog); INVOLVED IN negative regulation of BMP signaling pathway (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog); nucleus (ortholog) 8 57428139 57436353 - 22301074;30032202 116906852 MODEL JAAIVD010000027;XM_032909746 XP_032765637 protein-coding 625937321 Gjd3 gap junction protein delta 3 ENCODES a protein that exhibits gap junction channel activity (ortholog); gap junction channel activity involved in AV node cell-bundle of His cell electrical coupling (ortholog); monoatomic ion channel activity (ortholog); INVOLVED IN AV node cell to bundle of His cell communication by electrical coupling (ortholog); cell communication involved in cardiac conduction (ortholog); gap junction assembly (ortholog); ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); FOUND IN cell surface (ortholog); connexin complex (ortholog); gap junction (ortholog) 9 55461444 55463460 + 22301074;30032202 116909799 MODEL JAAIVD010000002;XM_032913493 XP_032769384 gap junction delta-3 protein protein-coding 625937327 Isx intestine specific homeobox ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN negative regulation of intestinal absorption (ortholog); regulation of transcription by RNA polymerase II (ortholog); regulation of vitamin A metabolic process (ortholog); ASSOCIATED WITH B-lymphoblastic leukemia/lymphoma (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) 17 4236452 4255812 + 22301074;30032202 116886418 MODEL JAAIVD010000011;XM_032887899;XM_032887900 XP_032743790;XP_032743791 intestine-specific homeobox protein-coding 625937338 LOC116889110 60S ribosomal protein L9-like 1 121682176 121682741 + 22301074;30032202 116889110 MODEL JAAIVD010000025;XM_032890278 XP_032746169 protein-coding 625937341 Ark2n arkadia (RNF111) N-terminal like PKA signaling regulator 2N ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN negative regulation of viral life cycle (ortholog); protein phosphorylation (ortholog); response to activity (ortholog); FOUND IN chromatin (ortholog) 15 54378524 54464947 + 30032202 116884586 MODEL JAAIVD010000010;XM_032885728;XM_032885729;XM_032885730 XP_032741619;XP_032741620;XP_032741621 C15H18orf25 chromosome 15 C18orf25 homolog;uncharacterized protein C18orf25 homolog protein-coding 625937354 LOC116892867 uncharacterized LOC116892867 2 195449071 195479190 - 116892867 MODEL JAAIVD010000001;XR_004386982 ncrna 625937359 LOC116888154 MICOS complex subunit Mic26-like X 113277341 113314516 + 22301074;30032202 116888154 MODEL JAAIVD010000014;XM_032889481 XP_032745372 protein-coding 625937367 LOC116888078 heat shock protein HSP 90-beta-like X 90213130 90215340 + 116888078 MODEL JAAIVD010000014 pseudo 625937368 LOC116899936 U2 spliceosomal RNA 4 145817130 145817320 + 116899936 MODEL JAAIVD010000003;XR_004387903 snrna 625937371 Epsti1 epithelial stromal interaction 1 INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to type II interferon (ortholog); gene expression (ortholog); ASSOCIATED WITH COVID-19 (ortholog); prostate cancer (ortholog) 12 46411098 46509093 - 116913780 MODEL JAAIVD010000007;XM_032918086 XP_032773977 epithelial-stromal interaction protein 1 protein-coding 625937389 LOC116896537 60S ribosomal protein L7a-like 1 31399159 31399957 - 116896537 MODEL JAAIVD010000025 pseudo 625937390 Gimap6 GTPase, IMAP family member 6 INVOLVED IN autophagy (ortholog); cell redox homeostasis (ortholog); defense response to bacterium (ortholog); ASSOCIATED WITH primary immunodeficiency disease (ortholog); FOUND IN cytosol (ortholog) 6 92262884 92269346 + 22301074;30032202 116903848 MODEL JAAIVD010000024;XM_032906580 XP_032762471 GTPase IMAP family member 6 protein-coding 625937397 LOC116912976 small nucleolar RNA SNORA17 11 74496640 74496771 - 116912976 MODEL JAAIVD010000006;XR_004389541 snorna 625937400 Arl13b ARF like GTPase 13B INVOLVED IN cilium assembly (ortholog); determination of left/right symmetry (ortholog); dorsal/ventral pattern formation (ortholog); ASSOCIATED WITH cystic kidney disease (ortholog); genetic disease (ortholog); Joubert syndrome (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); axoneme (ortholog); ciliary base (ortholog) 1 214598668 214639147 - 22301074;30032202 116910938 MODEL JAAIVD010000025;XM_032914681;XM_032914684;XR_004389290 XP_032770572;XP_032770575 ADP ribosylation factor like GTPase 13B;ADP-ribosylation factor-like protein 13B protein-coding 625937419 Ppif peptidylprolyl isomerase F ENCODES a protein that exhibits cyclosporin A binding (ortholog); enzyme inhibitor activity (ortholog); peptide binding (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); apoptotic process (ortholog); cellular response to arsenic-containing substance (ortholog); ASSOCIATED WITH COVID-19 (ortholog); intestinal disease (ortholog); Ulcer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrial permeability transition pore complex (ortholog) 13 1798959 1805378 + 22301074;30032202 116914675 MODEL JAAIVD010000008;XM_032919081 XP_032774972 peptidyl-prolyl cis-trans isomerase F, mitochondrial protein-coding 625937429 Rnaseh2c ribonuclease H2 subunit C INVOLVED IN RNA catabolic process (ortholog); ASSOCIATED WITH Aicardi-Goutieres syndrome (ortholog); Aicardi-Goutieres Syndrome 3 (ortholog); genetic disease (ortholog); FOUND IN ribonuclease H2 complex (ortholog) 2 2083654 2085458 - 22301074;30032202 116890725 MODEL JAAIVD010000001;XM_032891179 XP_032747070 protein-coding 625937437 Txndc2 thioredoxin domain containing 2 ENCODES a protein that exhibits protein disulfide isomerase activity (ortholog); thioredoxin-disulfide reductase (NADPH) activity (ortholog); INVOLVED IN cellular response to reactive oxygen species (ortholog); flagellated sperm motility (ortholog); FOUND IN cytoplasm (ortholog); outer dense fiber (ortholog); sperm flagellum (ortholog) 4 175620662 175622873 - 116898289 MODEL JAAIVD010000003;XM_032899641 XP_032755532 thioredoxin domain-containing protein 2 protein-coding 625937441 LOC116890508 small nucleolar RNA SNORA48 1 191270504 191270647 - 116890508 MODEL JAAIVD010000025;XR_004386692 snorna 625937444 Nprl3 NPR3 like, GATOR1 complex subunit INVOLVED IN aorta morphogenesis (ortholog); cardiac muscle tissue development (ortholog); cellular response to amino acid starvation (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH epilepsy (ortholog); familial focal epilepsy with variable foci 1 (ortholog); familial focal epilepsy with variable foci 3 (ortholog); FOUND IN GATOR1 complex (ortholog); lysosomal membrane (ortholog) 9 3612670 3650781 + 30032202 116908768 MODEL JAAIVD010000002;XM_032912132 XP_032768023 GATOR complex protein NPRL3 protein-coding 625937462 LOC116898306 ferritin light chain-like 4 32090088 32090767 - 116898306 MODEL JAAIVD010000003 pseudo 625937463 Eps8l2 EPS8 signaling adaptor L2 ENCODES a protein that exhibits actin binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN positive regulation of ruffle assembly (ortholog); regulation of Rho protein signal transduction (ortholog); Rho protein signal transduction (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 106 (ortholog); Meniere's disease (ortholog); FOUND IN cytosol (ortholog); protein-containing complex (ortholog); ruffle membrane (ortholog) 2 8114676 8139087 - 30032202 116890874 MODEL JAAIVD010000001;XM_032891456 XP_032747347 EPS8 like 2;epidermal growth factor receptor kinase substrate 8-like protein 2 protein-coding 625937488 Lrrc8a leucine rich repeat containing 8 VRAC subunit A ENCODES a protein that exhibits cyclic-GMP-AMP transmembrane transporter activity (ortholog); identical protein binding (ortholog); monoatomic anion channel activity (ortholog); INVOLVED IN aspartate transmembrane transport (ortholog); cell volume homeostasis (ortholog); chloride transmembrane transport (ortholog); ASSOCIATED WITH agammaglobulinemia (ortholog); agammaglobulinemia 5 (ortholog); FOUND IN cell surface (ortholog); lysosomal membrane (ortholog); membrane (ortholog) 5 5367012 5394268 - 22301074 116901188 MODEL JAAIVD010000023;XM_032902872;XM_032902873;XM_032902874;XM_032902875;XM_032902876;XM_032902877 XP_032758763;XP_032758764;XP_032758765;XP_032758766;XP_032758767;XP_032758768 volume-regulated anion channel subunit LRRC8A protein-coding 625937510 LOC116908128 sperm motility kinase 2B-like 8 13246282 13248368 - 22301074;30032202 116908128 MODEL JAAIVD010000027;XM_032911415 XP_032767306 protein-coding 625937515 LOC116906878 olfactory receptor 145 8 31493549 31494505 + 22301074;30032202 116906878 MODEL JAAIVD010000027;XM_032909790 XP_032765681 protein-coding 625937519 LOC116901009 T-complex protein 1 subunit theta-like 5 113995822 114102199 - 116901009 MODEL JAAIVD010000023 pseudo 625937520 Cpa5 carboxypeptidase A5 ENCODES a protein that exhibits peptidase activity (ortholog) 6 108929378 108947976 - 22301074;30032202 116902908 MODEL JAAIVD010000024;XM_032905233;XM_032905234 XP_032761124;XP_032761125 protein-coding 625937539 Pin1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); cis-trans isomerase activity (ortholog); cytoskeletal motor activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); microtubule polymerization (ortholog); negative regulation of amyloid-beta formation (ortholog); PARTICIPATES IN altered p53 signaling pathway; p53 signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); asthma (ortholog); Breast Neoplasms (ortholog); FOUND IN ciliary basal body (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 16919829 16931022 + 22301074;30032202 116907116 MODEL JAAIVD010000027;XM_032910090 XP_032765981 peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 protein-coding 625937547 Naa16 N-alpha-acetyltransferase 16, NatA auxiliary subunit ENCODES a protein that exhibits ribosome binding (ortholog); INVOLVED IN protein maturation (ortholog); FOUND IN cytosol (ortholog); NatA complex (ortholog) 12 44962390 45020919 + 22301074;30032202 116913335 MODEL JAAIVD010000007;XM_032917483;XR_004389605;XR_004389606 XP_032773374 protein-coding 625937577 Taok2 TAO kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); MAP kinase kinase kinase activity (ortholog); mitogen-activated protein kinase kinase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); axonogenesis (ortholog); basal dendrite arborization (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN actin cytoskeleton (ortholog); axon (ortholog); axonal growth cone (ortholog) 2 75011553 75030543 + 22301074 116891499 MODEL JAAIVD010000001;XM_032892612;XM_032892613;XM_032892615;XM_032892616;XM_032892617;XR_004386841 XP_032748503;XP_032748504;XP_032748506;XP_032748507;XP_032748508 serine/threonine-protein kinase TAO2 protein-coding 625937616 Chrnb1 cholinergic receptor nicotinic beta 1 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN behavioral response to nicotine (ortholog); monoatomic cation transport (ortholog); muscle cell development (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 2A (ortholog); congenital myasthenic syndrome 2C (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); neuromuscular junction (ortholog); plasma membrane (ortholog) 9 49390259 49402044 - 22301074;30032202 116908973 MODEL JAAIVD010000002;XM_032912436 XP_032768327 acetylcholine receptor subunit beta protein-coding 625937631 Pabpc4 poly(A) binding protein cytoplasmic 4 ENCODES a protein that exhibits mRNA binding (ortholog); poly(A) binding (ortholog); poly(C) RNA binding (ortholog); INVOLVED IN myeloid cell development (ortholog); regulation of mRNA stability (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) 1 34962187 34977933 - 30032202 116897020 MODEL JAAIVD010000025;XM_032898631;XM_032898640 XP_032754522;XP_032754531 polyadenylate-binding protein 4 protein-coding 625937654 LOC116895381 60S ribosomal protein L9-like 3 55773086 55773666 + 116895381 MODEL JAAIVD010000012 pseudo 625937655 LOC116889030 60S ribosomal protein L35-like X 18520414 18520769 - 116889030 MODEL JAAIVD010000014 pseudo 625937656 Ebf2 EBF transcription factor 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN adipose tissue development (ortholog); brown fat cell differentiation (ortholog); cell fate determination (ortholog) 12 57056016 57255955 - 30032202 116913391 MODEL JAAIVD010000007;XM_032917568;XM_032917569;XM_032917570;XM_032917571;XM_032917572;XM_032917573;XM_032917574 XP_032773459;XP_032773460;XP_032773461;XP_032773462;XP_032773463;XP_032773464;XP_032773465 transcription factor COE2 protein-coding 625937689 LOC116890618 U1 spliceosomal RNA 1 228782204 228782347 + 116890618 MODEL JAAIVD010000025 pseudo 625937690 Lrp2bp LRP2 binding protein 13 41869434 41886508 - 22301074 116914613 MODEL JAAIVD010000008;XM_032918976 XP_032774867 LRP2-binding protein protein-coding 625937703 Ca9 carbonic anhydrase 9 ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); molecular function activator activity (ortholog); zinc ion binding (ortholog); INVOLVED IN response to hypoxia (ortholog); response to testosterone (ortholog); response to xenobiotic stimulus (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH Anaplasia (ortholog); breast carcinoma (ortholog); chronic myelogenous leukemia, BCR-ABL1 positive (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) 1 2983635 2989642 - 22301074;30032202 116891079 MODEL JAAIVD010000025;XM_032891794 XP_032747685 protein-coding 625937717 LOC116900840 ubiquitin-60S ribosomal protein L40-like 5 52149270 52160874 + 116900840 MODEL JAAIVD010000023;XR_004387955 pseudo 625937721 LOC116908464 U6 spliceosomal RNA 8 15098334 15098439 + 116908464 MODEL JAAIVD010000027;XR_004388982 snrna 625937724 LOC116905865 zinc finger protein 431-like 7 13545880 13547335 - 22301074 116905865 MODEL JAAIVD010000026;XM_032908852;XM_032908853 XP_032764743;XP_032764744 protein-coding 625937734 LOC116890555 U1 spliceosomal RNA 1 209701472 209701634 + 116890555 MODEL JAAIVD010000025;XR_004386729 snrna 625937737 LOC116906338 U6 spliceosomal RNA 7 68056536 68056632 + 116906338 MODEL JAAIVD010000026 pseudo 625937738 LOC116892048 uncharacterized LOC116892048 2 143586790 143589055 - 116892048 MODEL JAAIVD010000001;XR_004386907 ncrna 625937742 Tm4sf5 transmembrane 4 L six family member 5 ENCODES a protein that exhibits arginine binding (ortholog); INVOLVED IN regulation of G1/S transition of mitotic cell cycle (ortholog); FOUND IN lysosomal membrane (ortholog); plasma membrane (ortholog) 9 50119308 50125784 + 22301074;30032202 116910444 MODEL JAAIVD010000002;XM_032914295 XP_032770186 transmembrane 4 L6 family member 5 protein-coding 625937751 Col6a6 collagen type VI alpha 6 chain FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) 8 96982242 97079065 - 30032202 116906925 MODEL JAAIVD010000027;XM_032909852 XP_032765743 collagen alpha-6(VI) chain protein-coding 625937790 LOC116886632 eukaryotic translation initiation factor 2 subunit 1-like 17 17525891 17529620 - 22301074;30032202 116886632 MODEL JAAIVD010000011;XM_032888137 XP_032744028 protein-coding 625937795 LOC116907348 vomeronasal type-1 receptor 4-like 8 33968736 33969591 - 116907348 MODEL JAAIVD010000027 pseudo 625937796 C13H19orf44 chromosome 13 C19orf44 homolog 13 14267258 14282807 + 116914295 MODEL JAAIVD010000008;XM_032918536;XM_032918537;XM_032918538 XP_032774427;XP_032774428;XP_032774429 uncharacterized protein C19orf44 homolog protein-coding 625937818 Anxa13 annexin A13 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); phosphatidylcholine binding (ortholog); INVOLVED IN negative regulation of Golgi to plasma membrane protein transport (ortholog); positive regulation of Golgi to plasma membrane protein transport (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); exocytic vesicle (ortholog) 1 232886347 232938569 - 22301074;30032202 116890105 MODEL JAAIVD010000025;XM_032890852 XP_032746743 protein-coding 625937833 LOC116914132 small nucleolar RNA SNORA17 12 22454611 22454740 + 116914132 MODEL JAAIVD010000007;XR_004389693 snorna 625937836 Trim21 tripartite motif containing 21 ENCODES a protein that exhibits identical protein binding (ortholog); transcription coactivator activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); innate immune response (ortholog); negative regulation of innate immune response (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nucleus (ortholog) 2 102493797 102507898 - 22301074 116891803 MODEL JAAIVD010000001;XM_032893159 XP_032749050 E3 ubiquitin-protein ligase TRIM21 protein-coding 625937847 Hibadh 3-hydroxyisobutyrate dehydrogenase ENCODES a protein that exhibits 3-hydroxyisobutyrate dehydrogenase activity (ortholog); INVOLVED IN L-valine catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; FOUND IN mitochondrion (ortholog) 6 88426486 88525901 + 22301074;30032202 116903787 MODEL JAAIVD010000024;XM_032906481 XP_032762372 3-hydroxyisobutyrate dehydrogenase, mitochondrial protein-coding 625937859 Ankra2 ankyrin repeat family A member 2 ENCODES a protein that exhibits histone deacetylase binding (ortholog); low-density lipoprotein particle receptor binding (ortholog); protein kinase binding (ortholog); INVOLVED IN regulation of protein-containing complex assembly (ortholog); FOUND IN 3M complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 3 198323943 198334541 - 22301074;30032202 116897259 MODEL JAAIVD010000012;XM_032898994;XM_032898995 XP_032754885;XP_032754886 ankyrin repeat family A protein 2 protein-coding 625937875 LOC116894016 olfactory receptor 52A5-like 2 101866858 101867808 + 22301074 116894016 MODEL JAAIVD010000001;XM_032895731 XP_032751622 protein-coding 625937878 Abcd4 ATP binding cassette subfamily D member 4 ENCODES a protein that exhibits ABC-type vitamin B12 transporter activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); cobalamin metabolic process (ortholog); cobalamin transport (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); Disease Progression (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); lysosomal membrane (ortholog); peroxisome (ortholog) 7 98709268 98723467 - 22301074;30032202 116905275 MODEL JAAIVD010000026;XM_032908135 XP_032764026 ATP-binding cassette sub-family D member 4 protein-coding 625937901 Sybu syntabulin ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN anterograde neuronal dense core vesicle transport (ortholog); axonal transport of mitochondrion (ortholog); positive regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); PARTICIPATES IN mitochondria transport pathway; FOUND IN dense body (ortholog); microtubule (ortholog); mitochondrion (ortholog) 1 219167785 219238680 - 30032202 116911229 MODEL JAAIVD010000025;XM_032915132;XM_032915139;XM_032915147;XM_032915151;XM_032915159;XM_032915167 XP_032771023;XP_032771030;XP_032771038;XP_032771042;XP_032771050;XP_032771058 protein-coding 625937925 LOC116887861 interleukin-1 receptor accessory protein-like 1 X 44851212 44895571 + 22301074;30032202 116887861 MODEL JAAIVD010000014;XM_032889359 XP_032745250 protein-coding 625937933 Proz protein Z, vitamin K dependent plasma glycoprotein INVOLVED IN blood coagulation (ortholog); PARTICIPATES IN coagulation cascade pathway; ASSOCIATED WITH Behcet's disease (ortholog); blood coagulation disease (ortholog); brain ischemia (ortholog); FOUND IN extracellular region (ortholog) 13 70614505 70626102 - 22301074;30032202 116914606 MODEL JAAIVD010000008;XM_032918970 XP_032774861 vitamin K-dependent protein Z protein-coding 625937945 Nars1 asparaginyl-tRNA synthetase 1 ENCODES a protein that exhibits asparagine-tRNA ligase activity (ortholog); CCR3 chemokine receptor binding (ortholog); protein dimerization activity (ortholog); INVOLVED IN asparaginyl-tRNA aminoacylation (ortholog); cell migration (ortholog); cerebral cortex development (ortholog); PARTICIPATES IN Canavan disease pathway; ASSOCIATED WITH Developmental Disease (ortholog); Neurodevelopmental Disorder with Microcephaly, Impaired Language, and Gait Abnormalities (ortholog); Neurodevelopmental Disorder with Microcephaly, Impaired Language, Epilepsy, and Gait Abnormalities (ortholog); FOUND IN cytosol (ortholog) 15 66755464 66771394 + 22301074;30032202 116884535 MODEL JAAIVD010000010;XM_032885670;XM_032885671 XP_032741561;XP_032741562 asparagine--tRNA ligase, cytoplasmic protein-coding 625937968 LOC116913968 olfactory receptor 4E1 12 71426948 71427880 + 22301074 116913968 MODEL JAAIVD010000007;XM_032918236 XP_032774127 protein-coding 625937971 LOC116905688 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like 7 52783020 52784163 - 116905688 MODEL JAAIVD010000026 pseudo 625937972 LOC116893862 olfactory receptor 226-like 2 61707929 61708867 + 22301074 116893862 MODEL JAAIVD010000001;XM_032895582 XP_032751473 protein-coding 625937975 Iqub IQ motif and ubiquitin domain containing INVOLVED IN cilium assembly (ortholog); flagellated sperm motility (ortholog); mating (ortholog); FOUND IN 9+2 motile cilium (ortholog); acrosomal vesicle (ortholog); motile cilium (ortholog) 6 114820184 114873885 + 30032202 116904035 MODEL JAAIVD010000024;XM_032906870 XP_032762761 IQ and ubiquitin-like domain-containing protein protein-coding 625937991 LOC116900288 olfactory receptor 8K5 5 63586924 63587865 - 22301074;30032202 116900288 MODEL JAAIVD010000023;XM_032902043 XP_032757934 protein-coding 625937994 LOC116893929 eukaryotic translation initiation factor 3 subunit K-like 2 83601919 83602567 - 116893929 MODEL JAAIVD010000001 pseudo 625937995 LOC116914284 sperm motility kinase-like 13 58950682 58952607 + 22301074;30032202 116914284 MODEL JAAIVD010000008;XM_032918508;XM_032918509 XP_032774399;XP_032774400 protein-coding 625938001 Smarcd2 SWI/SNF related BAF chromatin remodeling complex subunit D2 ENCODES a protein that exhibits ATP-dependent chromatin remodeler activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); PARTICIPATES IN SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH genetic disease (ortholog); myeloid leukemia (ortholog); neutropenia (ortholog); FOUND IN nucleoplasm (ortholog); SWI/SNF complex (ortholog) 9 72849140 72857825 + 30032202 116908756 MODEL JAAIVD010000002;XM_032912107 XP_032767998 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2;SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 protein-coding 625938018 LOC116908467 U6 spliceosomal RNA 8 73805264 73805369 + 116908467 MODEL JAAIVD010000027;XR_004388984 snrna 625938021 LOC116894004 olfactory receptor 51Q1-like 2 101643334 101644299 - 22301074 116894004 MODEL JAAIVD010000001;XM_032895720 XP_032751611 protein-coding 625938024 Ubr1 ubiquitin protein ligase E3 component n-recognin 1 ENCODES a protein that exhibits L-leucine binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to L-leucine (ortholog); negative regulation of TOR signaling (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH atherosclerosis (ortholog); cardiovascular system disease (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); proteasome complex (ortholog); ubiquitin ligase complex (ortholog) 5 98983091 99094560 - 22301074;30032202 116901847 MODEL JAAIVD010000023;XM_032904035 XP_032759926 E3 ubiquitin-protein ligase UBR1 protein-coding 625938075 LOC116887443 RT1 class I histocompatibility antigen, AA alpha chain-like 18 7866083 7869482 + 116887443 MODEL JAAIVD010000013;XR_004386215 pseudo 625938083 Gnb4 G protein subunit beta 4 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN substantia nigra development (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease dominant intermediate F (ortholog); FOUND IN cell body (ortholog); heterotrimeric G-protein complex (ortholog); synapse (ortholog) 3 122378758 122416578 + 22301074;30032202 116896963 MODEL JAAIVD010000012;XM_032898541 XP_032754432 guanine nucleotide-binding protein subunit beta-4 protein-coding 625938097 LOC116895607 60S ribosomal protein L22-like 1 3 157898116 157898564 + 116895607 MODEL JAAIVD010000012 pseudo 625938098 LOC116913073 PHD finger protein 11-like 12 64977641 64981878 + 30032202 116913073 MODEL JAAIVD010000007;XM_032917205 XP_032773096 protein-coding 625938105 LOC116913997 60S ribosomal protein L35a-like 1 251359853 251360298 - 116913997 MODEL JAAIVD010000025 pseudo 625938106 Cep135 centrosomal protein 135 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN centriole replication (ortholog); centriole-centriole cohesion (ortholog); positive regulation of establishment of protein localization (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 9 (ortholog); genetic disease (ortholog); primary autosomal recessive microcephaly 8 (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog) 11 33326842 33394874 + 116912447 MODEL JAAIVD010000006;XM_032916516 XP_032772407 centrosomal protein of 135 kDa protein-coding 625938136 Cfap90 cilia and flagella associated protein 90 INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal B tubule inner sheath (ortholog); axoneme (ortholog); ciliary basal body (ortholog) 2 199918667 199947013 + 116892902 MODEL JAAIVD010000001;XM_032894821 XP_032750712 C2H5orf49 chromosome 2 C5orf49 homolog;uncharacterized protein C5orf49 homolog protein-coding 625938143 Mdc1 mediator of DNA damage checkpoint 1 ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); histone reader activity (ortholog); INVOLVED IN DNA damage response (ortholog); DNA replication checkpoint signaling (ortholog); protein localization to site of double-strand break (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; histone modification pathway; ASSOCIATED WITH breast carcinoma (ortholog); cervical cancer (ortholog); lung carcinoma (ortholog); FOUND IN chromosome (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 18 9054470 9068903 + 22301074;30032202 116887470 MODEL JAAIVD010000013;XM_032889078 XP_032744969 mediator of DNA damage checkpoint protein 1 protein-coding 625938163 Zyg11b zyg-11 family member B, cell cycle regulator INVOLVED IN positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); protein quality control for misfolded or incompletely synthesized proteins (ortholog); ASSOCIATED WITH Goldenhar syndrome (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog) 1 46557910 46609551 + 22301074;30032202 116899175 MODEL JAAIVD010000025;XM_032900749 XP_032756640 protein zyg-11 homolog B protein-coding 625938181 LOC116911306 complement factor H-related protein 1-like 10 20038796 20071376 - 116911306 MODEL JAAIVD010000005;XM_032915220;XM_032915221 XP_032771111;XP_032771112 complement factor H-related protein 2-like protein-coding 625938195 Slc10a2 solute carrier family 10 member 2 ENCODES a protein that exhibits bile acid:sodium symporter activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); response to bacterium (ortholog); ASSOCIATED WITH cognitive disorder (ortholog); Diabetes Complications (ortholog); intestinal disease (ortholog); FOUND IN apical plasma membrane (ortholog); microvillus (ortholog); proteasome complex (ortholog) 13 78272879 78291925 - 30032202 116914612 MODEL JAAIVD010000008;XM_032918974 XP_032774865 ileal sodium/bile acid cotransporter protein-coding 625938205 LOC116890102 olfactory receptor 6C6 1 232510686 232511630 - 22301074;30032202 116890102 MODEL JAAIVD010000025;XM_032890849 XP_032746740 protein-coding 625938208 LOC116898208 transcription factor 19-like protein 4 139392614 139393355 + 116898208 MODEL JAAIVD010000003 pseudo 625938209 Smpdl3b sphingomyelin phosphodiesterase acid like 3B ENCODES a protein that exhibits phosphoric diester hydrolase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN lipid catabolic process (ortholog); negative regulation of inflammatory response (ortholog); negative regulation of toll-like receptor signaling pathway (ortholog); FOUND IN plasma membrane (ortholog) 1 25481200 25503967 + 22301074 116895402 MODEL JAAIVD010000025;XM_032896690 XP_032752581 acid sphingomyelinase-like phosphodiesterase 3b protein-coding 625938221 LOC116898036 uncharacterized LOC116898036 4 81823763 81829409 + 116898036 MODEL JAAIVD010000003;XM_032899428 XP_032755319 uncharacterized protein LOC116898036 protein-coding 625938227 Tctn1 tectonic family member 1 INVOLVED IN central nervous system interneuron axonogenesis (ortholog); cilium assembly (ortholog); dorsal/ventral neural tube patterning (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Developmental Disabilities (ortholog); Developmental Disease (ortholog); FOUND IN ciliary transition zone (ortholog); extracellular region (ortholog); membrane (ortholog) 16 31585406 31613408 + 30032202 116885428 MODEL JAAIVD010000004;XM_032886714 XP_032742605 tectonic-1 protein-coding 625938246 Foxb1 forkhead box B1 ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN axon target recognition (ortholog); cell migration in diencephalon (ortholog); epithelial cell differentiation involved in mammary gland alveolus development (ortholog); FOUND IN nucleus (ortholog) 8 64102620 64103597 - 30032202 116907375 MODEL JAAIVD010000027;XM_032910328 XP_032766219 forkhead box protein B1 protein-coding 625938249 LOC116902597 small nucleolar RNA SNORA17 5 60875829 60875958 - 116902597 MODEL JAAIVD010000023;XR_004388186 snorna 625938252 Idua alpha-L-iduronidase ENCODES a protein that exhibits L-iduronidase activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); adult walking behavior (ortholog); bone development (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); gastric ulcer (ortholog); genetic disease (ortholog); FOUND IN extracellular region (ortholog); lysosomal lumen (ortholog); lysosome (ortholog) 11 18447896 18475544 + 22301074;30032202 116912170 MODEL JAAIVD010000006;XM_032916096;XR_004389429 XP_032771987 protein-coding 625938276 Cblif cobalamin binding intrinsic factor ENCODES a protein that exhibits cargo receptor ligand activity (ortholog); cobalamin binding (ortholog); molecular carrier activity (ortholog); INVOLVED IN cobalamin transport (ortholog); ASSOCIATED WITH congenital intrinsic factor deficiency (ortholog); gastric ulcer (ortholog); gastritis (ortholog); FOUND IN apical plasma membrane (ortholog); endosome (ortholog); extracellular region (ortholog) 2 11107188 11121159 - 22301074;30032202 116890982 MODEL JAAIVD010000001;XM_032891656 XP_032747547 protein-coding 625938288 LOC116902946 vomeronasal type-1 receptor 44-like 6 124002428 124003657 + 22301074;30032202 116902946 MODEL JAAIVD010000024;XM_032905271 XP_032761162 protein-coding 625938292 LOC116884386 endothelial differentiation-related factor 1-like 15 57529112 57533458 + 116884386 MODEL JAAIVD010000010 pseudo 625938293 LOC116904803 U4 spliceosomal RNA 6 73614063 73614220 - 116904803 MODEL JAAIVD010000024 pseudo 625938294 LOC116914312 macrophage migration inhibitory factor-like 13 39867353 39867806 + 116914312 MODEL JAAIVD010000008 pseudo 625938295 Akr1a1 aldo-keto reductase family 1 member A1 ENCODES a protein that exhibits aldose reductase (NADPH) activity (ortholog); all-trans-retinol dehydrogenase (NAD+) activity (ortholog); glucuronolactone reductase activity (ortholog); INVOLVED IN aldehyde catabolic process (ortholog); cellular detoxification of aldehyde (ortholog); D-glucuronate catabolic process (ortholog); PARTICIPATES IN doxorubicin pharmacokinetics pathway; prostaglandin biosynthetic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); breast cancer (ortholog); Carcinogenesis (ortholog); FOUND IN apical plasma membrane (ortholog); cytosol (ortholog); synapse (ortholog) 1 40276661 40293160 - 22301074;30032202 116898434 MODEL JAAIVD010000025;XM_032899708 XP_032755599 protein-coding 625938308 Htr3a 5-hydroxytryptamine receptor 3A ENCODES a protein that exhibits identical protein binding (ortholog); ligand-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); serotonin binding (ortholog); INVOLVED IN behavioral response to ethanol (ortholog); cellular response to growth factor stimulus (ortholog); positive regulation of ion transmembrane transporter activity (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); amphetamine abuse (ortholog); autistic disorder (ortholog); FOUND IN axon (ortholog); cleavage furrow (ortholog); glutamatergic synapse (ortholog) 8 43389669 43401573 - 22301074;30032202;7565620 116907881 MODEL D49395;JAAIVD010000027;XM_032911070 BAA08388;XP_032766961 serotonin 5-HT3 receptor protein-coding 625938321 LOC116906394 small nucleolar RNA SNORD113/SNORD114 family 7 127214824 127214895 + 116906394 MODEL JAAIVD010000026;XR_004388662 snorna 625938324 Rpl38 ribosomal protein L38 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN 90S preribosome assembly (ortholog); axial mesoderm development (ortholog); cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH otitis media (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic large ribosomal subunit (ortholog) 9 74652405 74656051 - 1840484;22301074;30032202 116910028 MODEL JAAIVD010000002;X57007;XM_032913811 CAA40328;XP_032769702 60S ribosomal protein L38 protein-coding 625938333 LOC116883966 Ig kappa chain V-II region 26-10-like 14 25551858 25552700 + 116883966 MODEL JAAIVD010000009 pseudo 625938334 LOC116903641 disks large homolog 5-like 6 137224113 137239372 + 116903641 MODEL JAAIVD010000024 pseudo 625938335 Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha ENCODES a protein that exhibits 1-phosphatidylinositol-3-kinase activity (ortholog); 1-phosphatidylinositol-4,5-bisphosphate 3-kinase activity (ortholog); insulin receptor substrate binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); adipose tissue development (ortholog); autosome genomic imprinting (ortholog); PARTICIPATES IN adenosine signaling pathway; altered phosphatidylinositol 3-kinase signaling pathway; altered phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); adenoid cystic carcinoma (ortholog); Agenesis of Corpus Callosum (ortholog); FOUND IN intercalated disc (ortholog); lamellipodium (ortholog); phosphatidylinositol 3-kinase complex (ortholog) 3 122534305 122612749 - 22301074;30032202 116896968 MODEL JAAIVD010000012;XM_032898544 XP_032754435 phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform protein-coding 625938360 LOC116897316 cytochrome c oxidase subunit 7C, mitochondrial ASSOCIATED WITH Alzheimer's disease (ortholog); obesity (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) 3 210649331 210651339 + 22301074;30032202 116897316 MODEL JAAIVD010000012;XM_032899072 XP_032754963 protein-coding 625938367 LOC116907223 60S ribosomal protein L35a-like 8 99740350 99740775 + 22301074;30032202 116907223 MODEL JAAIVD010000027;XM_032910187 XP_032766078 protein-coding 625938372 Ciao3 cytosolic iron-sulfur assembly component 3 INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); intracellular oxygen homeostasis (ortholog); iron-sulfur cluster assembly (ortholog); PARTICIPATES IN cytosolic iron-sulfur cluster protein assembly pathway; ASSOCIATED WITH hereditary hemorrhagic telangiectasia (ortholog); High Myopia (ortholog); FOUND IN cytosolic [4Fe-4S] assembly targeting complex (ortholog) 9 3039241 3048122 + 30032202 116908653 MODEL JAAIVD010000002;XM_032911923 XP_032767814 protein-coding 625938387 Tmem203 transmembrane protein 203 INVOLVED IN intracellular calcium ion homeostasis (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH epilepsy (ortholog); FOUND IN endoplasmic reticulum (ortholog) 5 11925871 11926847 - 30032202 116901314 MODEL JAAIVD010000023;XM_032903125 XP_032759016 protein-coding 625938392 LOC116888143 receptor-binding cancer antigen expressed on SiSo cells-like X 109281072 109309560 - 116888143 MODEL JAAIVD010000014 pseudo 625938393 Mad2l1bp MAD2L1 binding protein INVOLVED IN deactivation of mitotic spindle assembly checkpoint (ortholog); regulation of exit from mitosis (ortholog); ASSOCIATED WITH Zellweger syndrome (ortholog); FOUND IN cytoplasm (ortholog); nuclear membrane (ortholog); nucleolus (ortholog) 4 83717559 83721807 + 22301074;30032202 116899122 MODEL JAAIVD010000003;XM_032900647 XP_032756538 MAD2L1-binding protein protein-coding 625938400 Sohlh1 spermatogenesis and oogenesis specific basic helix-loop-helix 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN cell differentiation (ortholog); oocyte differentiation (ortholog); oogenesis (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); hypogonadism (ortholog); ovarian dysgenesis 5 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 5 11239196 11243398 + 22301074;30032202 116900083 MODEL JAAIVD010000023;XM_032901865 XP_032757756 spermatogenesis- and oogenesis-specific basic helix-loop-helix-containing protein 1 protein-coding 625938411 LOC116890099 40S ribosomal protein S10-like 1 232414637 232415110 + 116890099 MODEL JAAIVD010000025 pseudo 625938412 Prdx5 peroxiredoxin 5 ENCODES a protein that exhibits antioxidant activity (ortholog); cysteine-type endopeptidase inhibitor activity involved in apoptotic process (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to reactive oxygen species (ortholog); hydrogen peroxide catabolic process (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH alopecia areata (ortholog); brucellosis (ortholog); Chronic Hepatitis C (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) 2 884170 887111 + 22301074;30032202 116894820 MODEL JAAIVD010000001;XM_032896492 XP_032752383 peroxiredoxin-5, mitochondrial protein-coding 625938422 Opcml opioid binding protein/cell adhesion molecule like INVOLVED IN negative regulation of glial cell proliferation (ortholog); positive regulation of cell size (ortholog); positive regulation of synapse assembly (ortholog); ASSOCIATED WITH ovarian cancer (ortholog); Ovarian Neoplasms (ortholog); schizophrenia (ortholog); FOUND IN apical dendrite (ortholog); dendritic spine (ortholog); neuronal cell body (ortholog) 8 23654966 24759599 + 30032202 116906666 MODEL JAAIVD010000027;XM_032909449;XM_032909450;XM_032909451;XM_032909452;XM_032909453;XM_032909454 XP_032765340;XP_032765341;XP_032765342;XP_032765343;XP_032765344;XP_032765345 opioid-binding protein/cell adhesion molecule protein-coding 625938445 Shank3 SH3 and multiple ankyrin repeat domains 3 ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); identical protein binding (ortholog); ionotropic glutamate receptor binding (ortholog); INVOLVED IN adult behavior (ortholog); AMPA glutamate receptor clustering (ortholog); associative learning (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); autosomal recessive intellectual developmental disorder 37 (ortholog); FOUND IN ciliary membrane (ortholog); glutamatergic synapse (ortholog); neuron projection (ortholog) 1 258806611 258867266 + 30032202 116915211 MODEL JAAIVD010000025;XM_032919588 XP_032775479 SH3 and multiple ankyrin repeat domains protein 3 protein-coding 625938470 LOC116906688 uncharacterized LOC116906688 8 40304150 40318740 + 116906688 MODEL JAAIVD010000027;XR_004388762 ncrna 625938475 LOC116908441 U2 spliceosomal RNA 8 63944119 63944289 + 116908441 MODEL JAAIVD010000027 pseudo 625938476 Aplf aprataxin and PNKP like factor ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); ADP-D-ribose modification-dependent protein binding (ortholog); DNA endonuclease activity (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); DNA repair-dependent chromatin remodeling (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; histone modification pathway; non-homologous end joining pathway of double-strand break repair; FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 6 58652364 58697262 + 22301074;30032202 116903538 MODEL JAAIVD010000024;XM_032906152 XP_032762043 aprataxin and PNK-like factor protein-coding 625938490 LOC116893242 YEATS domain-containing protein 4-like 2 125775393 125792924 + 116893242 MODEL JAAIVD010000001 pseudo 625938491 Tex30 testis expressed 30 4 120153104 120161943 - 116899347 MODEL JAAIVD010000003;XM_032901038;XM_032901039;XM_032901040;XM_032901041;XM_032901042 XP_032756929;XP_032756930;XP_032756931;XP_032756932;XP_032756933 testis-expressed protein 30 protein-coding 625938509 LOC116898974 carbonyl reductase [NADPH] 1 4 51008591 51011253 - 30032202 116898974 MODEL JAAIVD010000003;XM_032900398;XM_032900399 XP_032756289;XP_032756290 protein-coding 625938521 LOC116901516 uncharacterized LOC116901516 5 50460524 50481296 + 116901516 MODEL JAAIVD010000023 pseudo 625938522 Aldh6a1 aldehyde dehydrogenase 6 family member A1 ENCODES a protein that exhibits methylmalonate-semialdehyde dehydrogenase (acylating, NAD) activity (ortholog); thiolester hydrolase activity (ortholog); INVOLVED IN beta-alanine catabolic process (ortholog); brown fat cell differentiation (ortholog); L-valine catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); autism spectrum disorder (ortholog); Methylmalonate Semialdehyde Dehydrogenase Deficiency (ortholog); FOUND IN mitochondrion (ortholog) 7 98542743 98563214 - 22301074;30032202 116905270 MODEL JAAIVD010000026;XM_032908122 XP_032764013 methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial protein-coding 625938538 Csrp3 cysteine and glycine rich protein 3 ENCODES a protein that exhibits actinin binding (ortholog); identical protein binding (ortholog); MRF binding (ortholog); INVOLVED IN blood vessel remodeling (ortholog); cardiac muscle contraction (ortholog); cardiac muscle hypertrophy (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); cardiomyopathy (ortholog); congestive heart failure (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 2 151011169 151021283 + 30032202 116894320 MODEL JAAIVD010000001;XM_032896012;XM_032896013;XM_032896014;XM_032896015 XP_032751903;XP_032751904;XP_032751905;XP_032751906 cysteine and glycine-rich protein 3 protein-coding 625938558 LOC116907792 olfactory receptor 8D1-like 8 32627963 32628889 + 22301074;30032202 116907792 MODEL JAAIVD010000027;XM_032910934 XP_032766825 protein-coding 625938561 Cbln4 cerebellin 4 precursor INVOLVED IN inhibitory synapse assembly (ortholog); protein secretion (ortholog); trans-synaptic signaling, modulating synaptic transmission (ortholog); FOUND IN extracellular region (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) 5 145958620 145965939 + 22301074 116902289 MODEL JAAIVD010000023;XM_032904724 XP_032760615 cerebellin-4 protein-coding 625938568 Spatc1 spermatogenesis and centriole associated 1 ENCODES a protein that exhibits gamma-tubulin binding (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog) 1 248595804 248619247 + 116890149 MODEL JAAIVD010000025;XM_032890884 XP_032746775 speriolin protein-coding 625938577 Msx2 msh homeobox 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN activation of meiosis (ortholog); anterior/posterior pattern specification (ortholog); BMP signaling pathway (ortholog); ASSOCIATED WITH Craniofacial Abnormalities (ortholog); craniosynostosis (ortholog); craniosynostosis 2 (ortholog); FOUND IN nuclear speck (ortholog); transcription regulator complex (ortholog) 14 71809062 71814731 - 22301074;30032202 116883451 MODEL JAAIVD010000009;XM_032884597 XP_032740488 homeobox protein MSX-2 protein-coding 625938583 LOC116910199 schlafen family member 12-like 9 87468587 87474661 - 116910199 MODEL JAAIVD010000002;XM_032914060;XM_032914061 XP_032769951;XP_032769952 protein-coding 625938592 LOC116892068 60S ribosomal protein L31-like 2 149575117 149575532 - 116892068 MODEL JAAIVD010000001 pseudo 625938593 LOC116897470 U7 small nuclear RNA 3 208316652 208316712 + 116897470 MODEL JAAIVD010000012;XR_004387496 snrna 625938596 Trpv4 transient receptor potential cation channel subfamily V member 4 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); alpha-tubulin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament organization (ortholog); ATP export (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 5 (ortholog); Auditory Neuropathy (ortholog); autosomal dominant distal hereditary motor neuronopathy (ortholog); FOUND IN adherens junction (ortholog); apical plasma membrane (ortholog); cell surface (ortholog) 16 39303726 39328667 + 22301074;30032202 116885478 A0A8A1UED4 MODEL JAAIVD010000004;XM_032886767 XP_032742658 protein-coding 625938614 Dazap1 DAZ associated protein 1 ENCODES a protein that exhibits poly(G) binding (ortholog); poly(U) RNA binding (ortholog); RNA stem-loop binding (ortholog); INVOLVED IN cell population proliferation (ortholog); maternal placenta development (ortholog); positive regulation of mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Monoclonal B-Cell Lymphocytosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 1 154595528 154620913 - 22301074;30032202 116905224 MODEL JAAIVD010000025;XM_032908041;XM_032908051;XM_032908058;XM_032908066 XP_032763932;XP_032763942;XP_032763949;XP_032763957 DAZ-associated protein 1 protein-coding 625938640 LOC116907133 intercellular adhesion molecule 5 8 17294238 17301272 + 22301074;30032202 116907133 MODEL JAAIVD010000027;XM_032910108 XP_032765999 protein-coding 625938655 LOC116909771 olfactory receptor 6C3-like 1 160841476 160842426 + 22301074;30032202 116909771 MODEL JAAIVD010000025;XM_032913494 XP_032769385 protein-coding 625938658 Lat linker for activation of T cells ENCODES a protein that exhibits molecular condensate scaffold activity (ortholog); protein kinase binding (ortholog); signaling adaptor activity (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); gene expression (ortholog); homeostasis of number of cells (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); IgG4-related disease (ortholog); immunodeficiency 52 (ortholog); FOUND IN cell-cell junction (ortholog); COP9 signalosome (ortholog); immunological synapse (ortholog) 2 75564901 75570037 + 22301074;30032202 116891530 MODEL JAAIVD010000001;XM_032892679;XR_004386843;XR_004386844 XP_032748570 linker for activation of T-cells family member 1 protein-coding 625938675 LOC116913891 transcription elongation factor A protein-like 8 12 19312897 19313226 + 116913891 MODEL JAAIVD010000007 pseudo 625938676 Zrsr2 zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2 ENCODES a protein that exhibits identical protein binding (ortholog); pre-mRNA 3'-splice site binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); spliceosomal complex assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Chromosome 8, Trisomy (ortholog); congenital heart disease (ortholog); FOUND IN nucleolus (ortholog); U12-type spliceosomal complex (ortholog) X 24524827 24549333 - 22301074;30032202 116888477 MODEL JAAIVD010000014;XM_032889754 XP_032745645 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 protein-coding 625938691 LOC116892794 zinc finger protein 501-like 2 186071857 186078886 + 30032202 116892794 MODEL JAAIVD010000001;XM_032894665;XM_032894666 XP_032750556;XP_032750557 zinc finger protein OZF-like protein-coding 625938701 LOC116895954 histone deacetylase 1-like 3 142078033 142107752 + 116895954 MODEL JAAIVD010000012 pseudo 625938702 Ddah2 DDAH family member 2, ADMA-independent ENCODES a protein that exhibits dimethylargininase activity (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); pre-eclampsia (ortholog); FOUND IN mitochondrion (ortholog) 18 7656749 7659852 + 30032202 116887089 MODEL JAAIVD010000013;XM_032888598;XM_032888599 XP_032744489;XP_032744490 N(G),N(G)-dimethylarginine dimethylaminohydrolase 2;dimethylarginine dimethylaminohydrolase 2 protein-coding 625938716 Mmab metabolism of cobalamin associated B ENCODES a protein that exhibits cobalamin binding (ortholog); corrinoid adenosyltransferase activity (ortholog); transferase activity, transferring alkyl or aryl (other than methyl) groups (ortholog); INVOLVED IN cobalamin metabolic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); glycogen storage disease I (ortholog); glycogen storage disease Ia (ortholog); FOUND IN mitochondrion (ortholog) 16 39510528 39521203 + 30032202 116885741 MODEL JAAIVD010000004;XM_032887048 XP_032742939 corrinoid adenosyltransferase protein-coding 625938729 LOC116885314 60S ribosomal protein L32-like 16 31126979 31127448 + 116885314 MODEL JAAIVD010000004 pseudo 625938730 LOC116910248 mesothelin-like protein 9 3001190 3013197 + 30032202 116910248 MODEL JAAIVD010000002;XM_032914139 XP_032770030 protein-coding 625938750 Jpt1 Jupiter microtubule associated homolog 1 FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 9 68579242 68597099 + 30032202 116909270 MODEL JAAIVD010000002;XM_032912798 XP_032768689 protein-coding 625938759 Rita1 RBPJ interacting and tubulin associated 1 ENCODES a protein that exhibits tubulin binding (ortholog); INVOLVED IN negative regulation of Notch signaling pathway (ortholog); nuclear export (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 16 33215780 33218507 + 22301074;30032202 116885298 MODEL JAAIVD010000004;XM_032886547 XP_032742438 RBPJ-interacting and tubulin-associated protein 1 protein-coding 625938765 LOC116895797 oligosaccharyltransferase complex subunit OSTC-like 3 63171090 63178270 + 30032202 116895797 MODEL JAAIVD010000012;XM_032896937 XP_032752828 protein-coding 625938769 C6H2orf42 chromosome 6 C2orf42 homolog FOUND IN nucleoplasm (ortholog) 6 59834347 59862500 - 30032202 116903551 MODEL JAAIVD010000024;XM_032906164;XM_032906165;XM_032906166;XM_032906167 XP_032762055;XP_032762056;XP_032762057;XP_032762058 uncharacterized protein C2orf42 homolog protein-coding 625938791 Proca1 protein interacting with cyclin A1 ENCODES a protein that exhibits cyclin binding (ortholog) 9 92232414 92245395 - 22301074 116909951 MODEL JAAIVD010000002;XM_032913726 XP_032769617 protein PROCA1 protein-coding 625938799 LOC116888647 ubiquitin-conjugating enzyme E2 L3-like 1 98718575 98719112 - 116888647 MODEL JAAIVD010000025 pseudo 625938800 Abcg8 ATP binding cassette subfamily G member 8 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); ATPase-coupled transmembrane transporter activity (ortholog); INVOLVED IN cholesterol efflux (ortholog); cholesterol homeostasis (ortholog); negative regulation of intestinal cholesterol absorption (ortholog); ASSOCIATED WITH arteriosclerosis (ortholog); atherosclerosis (ortholog); cholestasis (ortholog); FOUND IN apical plasma membrane (ortholog); ATP-binding cassette (ABC) transporter complex (ortholog); plasma membrane (ortholog) 7 8208242 8224441 - 22301074;30032202 116905687 A0A8A1U9B8;A0A8A1UHJ8 MODEL JAAIVD010000026;XM_032908672;XM_032908673 XP_032764563;XP_032764564 ATP-binding cassette sub-family G member 8 protein-coding 625938817 LOC116907267 olfactory receptor 7G2-like 8 15063338 15064312 + 116907267 MODEL JAAIVD010000027 pseudo 625938818 LOC116900949 lys-63-specific deubiquitinase BRCC36-like 5 90189575 90191325 + 22301074;30032202 116900949 MODEL JAAIVD010000023;XM_032902589 XP_032758480 protein-coding 625938823 Rbm10 RNA binding motif protein 10 ENCODES a protein that exhibits identical protein binding (ortholog); miRNA binding (ortholog); single-stranded RNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); cardiac muscle cell myoblast differentiation (ortholog); mRNA stabilization (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); colorectal cancer (ortholog); congestive heart failure (ortholog); FOUND IN nuclear speck (ortholog); nucleolus (ortholog); nucleus (ortholog) X 3193431 3225618 - 22301074;30032202 116888315 MODEL JAAIVD010000014;XM_032889588 XP_032745479 RNA-binding protein 10 protein-coding 625938851 LOC116901415 28S ribosomal protein S21, mitochondrial-like 5 32585469 32585746 - 116901415 MODEL JAAIVD010000023 pseudo 625938852 LOC116895105 U2 spliceosomal RNA 2 9211013 9211212 - 116895105 MODEL JAAIVD010000001;XR_004387262 snrna 625938855 LOC116903640 protein LLP homolog 6 132481034 132486109 - 116903640 MODEL JAAIVD010000024 pseudo 625938856 LOC116897076 uncharacterized LOC116897076 3 157166985 157193767 - 116897076 MODEL JAAIVD010000012;XR_004387394 ncrna 625938861 Hdac9 histone deacetylase 9 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); histone deacetylase activity (ortholog); histone deacetylase binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); cholesterol homeostasis (ortholog); determination of adult lifespan (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH atherosclerosis (ortholog); Auriculocondylar Syndrome 4 (ortholog); middle cerebral artery infarction (ortholog); FOUND IN cytoplasm (ortholog); histone methyltransferase complex (ortholog); nucleus (ortholog) 7 47379423 48136354 - 22301074;30032202 116904968 MODEL JAAIVD010000026;XM_032907639;XM_032907640;XM_032907641;XM_032907643;XM_032907644;XM_032907645;XM_032907646;XM_032907647 XP_032763530;XP_032763531;XP_032763532;XP_032763534;XP_032763535;XP_032763536;XP_032763537;XP_032763538 protein-coding 625938906 LOC116884098 small nucleolar RNA U13 14 62323045 62323147 + 116884098 MODEL JAAIVD010000009;XR_004385837 snorna 625938909 Pomgnt1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity (ortholog); manganese ion binding (ortholog); INVOLVED IN basement membrane organization (ortholog); brain development (ortholog); dentate gyrus development (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2O (ortholog); congenital muscular dystrophy (ortholog); congenital muscular dystrophy-dystroglycanopathy type A3 (ortholog); FOUND IN Golgi membrane (ortholog); membrane (ortholog) 1 39833765 39843335 + 30032202 116898253 MODEL JAAIVD010000025;XM_032899607;XM_032899614 XP_032755498;XP_032755505 protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1 protein-coding 625938938 Trim31 tripartite motif containing 31 ENCODES a protein that exhibits transcription coactivator activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); defense response to virus (ortholog); host-mediated suppression of symbiont invasion (ortholog); ASSOCIATED WITH irritant dermatitis (ortholog); FOUND IN mitochondrion (ortholog) 18 9871281 9881870 + 22301074 116887718 MODEL JAAIVD010000013;XM_032889316 XP_032745207 E3 ubiquitin-protein ligase TRIM31 protein-coding 625938950 Slc22a15 solute carrier family 22 member 15 ENCODES a protein that exhibits amino-acid betaine transmembrane transporter activity (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) 3 56146523 56212625 + 22301074 116896458 MODEL JAAIVD010000012;XM_032897618 XP_032753509 protein-coding 625938966 LOC116907604 60S ribosomal protein L35a-like 1 165554347 165554695 + 22301074;30032202 116907604 MODEL JAAIVD010000025;XM_032910659 XP_032766550 protein-coding 625938970 Spast spastin ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-tubulin binding (ortholog); microtubule binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); axonal transport of mitochondrion (ortholog); cytokinetic process (ortholog); ASSOCIATED WITH cerebral palsy (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN axon (ortholog); centrosome (ortholog); cytoplasm (ortholog) 7 18860333 18911276 - 22301074;30032202 116905936 MODEL JAAIVD010000026;XM_032908925;XM_032908926;XM_032908927;XM_032908928 XP_032764816;XP_032764817;XP_032764818;XP_032764819 protein-coding 625939000 LOC116914943 ral guanine nucleotide dissociation stimulator-like 13 11544228 11545979 - 116914943 MODEL JAAIVD010000008;XM_032919366 XP_032775257 protein-coding 625939005 LOC116907729 olfactory receptor 867-like 8 16050272 16051268 - 22301074;30032202 116907729 MODEL JAAIVD010000027;XM_032910854 XP_032766745 protein-coding 625939008 Naa15 N-alpha-acetyltransferase 15, NatA auxiliary subunit ENCODES a protein that exhibits acetyltransferase activity (ortholog); N-acetyltransferase activity (ortholog); ribosome binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); protein maturation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); autosomal dominant intellectual developmental disorder 50 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); NatA complex (ortholog) 3 102980383 103042076 - 22301074;30032202 116896890 MODEL JAAIVD010000012;XM_032898436 XP_032754327 protein-coding 625939032 LOC116886424 zinc finger protein ZFPM1-like 17 41913630 41939292 + 116886424 MODEL JAAIVD010000011;XM_032887910 XP_032743801 protein-coding 625939039 LOC116888850 olfactory receptor 6C2-like 1 232626510 232631612 - 116888850 MODEL JAAIVD010000025 pseudo 625939040 Tmem216 transmembrane protein 216 INVOLVED IN cilium assembly (ortholog); positive regulation of cilium assembly (ortholog); positive regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); Joubert syndrome (ortholog); FOUND IN ciliary transition zone (ortholog); cilium (ortholog); MKS complex (ortholog) 2 10027768 10033083 - 30032202 116890959 MODEL JAAIVD010000001;XM_032891617;XM_032891618 XP_032747508;XP_032747509 protein-coding 625939052 LOC116899974 activator of basal transcription 1-like 5 130620280 130621078 - 116899974 MODEL JAAIVD010000023 pseudo 625939053 LOC116893278 polyribonucleotide 5'-hydroxyl-kinase Clp1-like 2 145325463 145326569 - 116893278 MODEL JAAIVD010000001 pseudo 625939054 LOC116913423 uncharacterized LOC116913423 12 9336396 9388173 - 116913423 MODEL JAAIVD010000007;XR_004389615 ncrna 625939058 Auh AU RNA binding methylglutaconyl-CoA hydratase ENCODES a protein that exhibits enoyl-CoA hydratase activity (ortholog); methylglutaconyl-CoA hydratase activity (ortholog); mRNA 3'-UTR binding (ortholog); INVOLVED IN L-leucine catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH 3-methylglutaconic aciduria type 1 (ortholog); genetic disease (ortholog); renal tubular transport disease (ortholog); FOUND IN mitochondrion (ortholog) 14 71147090 71241264 - 30032202 116883339 MODEL JAAIVD010000009;XM_032884411;XM_032884412 XP_032740302;XP_032740303 methylglutaconyl-CoA hydratase, mitochondrial protein-coding 625939075 Ctnnbip1 catenin beta interacting protein 1 ENCODES a protein that exhibits armadillo repeat domain binding (ortholog); beta-catenin binding (ortholog); transcription coactivator binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); branching involved in ureteric bud morphogenesis (ortholog); canonical Wnt signaling pathway (ortholog); FOUND IN beta-catenin destruction complex (ortholog); beta-catenin-ICAT complex (ortholog); cytoplasm (ortholog) 1 11205202 11232014 - 22301074;30032202 116892599 MODEL JAAIVD010000025;XM_032894384 XP_032750275 beta-catenin-interacting protein 1 protein-coding 625939083 LOC116906449 small nucleolar RNA SNORA17 7 96905983 96906105 - 116906449 MODEL JAAIVD010000026 pseudo 625939084 LOC116892984 tubulin beta-4B chain-like 2 217489401 217490956 + 116892984 MODEL JAAIVD010000001 pseudo 625939085 Ca6 carbonic anhydrase 6 INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN extracellular region (ortholog) 1 10554298 10572504 + 22301074;30032202 116886147 MODEL JAAIVD010000025;XM_032887507 XP_032743398 protein-coding 625939096 Stpg4 sperm-tail PG-rich repeat containing 4 ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); INVOLVED IN epigenetic programing of male pronucleus (ortholog); pyrimidine-containing compound catabolic process (ortholog); FOUND IN cytoplasm (ortholog); female pronucleus (ortholog); germinal vesicle (ortholog) 7 5549417 5583559 + 30032202 116905748 MODEL JAAIVD010000026;XM_032908717 XP_032764608 protein STPG4 protein-coding 625939107 LOC116910961 magnesium transporter MRS2 homolog, mitochondrial-like 1 38047766 38049080 + 116910961 MODEL JAAIVD010000025 pseudo 625939108 Shisal2b shisa like 2B 3 192497542 192513382 + 116895664 MODEL JAAIVD010000012;XM_032896871 XP_032752762 protein shisa-like-2B protein-coding 625939115 LOC116900963 olfactory receptor 6C1-like 5 102141706 102142665 - 116900963 MODEL JAAIVD010000023 pseudo 625939116 LOC116889323 protein transport protein Sec61 subunit gamma-like X 99110167 99110373 + 116889323 MODEL JAAIVD010000014 pseudo 625939117 Stmn3 stathmin 3 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN blastocyst hatching (ortholog); cellular response to nerve growth factor stimulus (ortholog); cytoplasmic microtubule organization (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 5 158403151 158411453 - 22301074;30032202 116902435 MODEL JAAIVD010000023;XM_032904971 XP_032760862 stathmin-3 protein-coding 625939126 LOC116895099 small nucleolar RNA U109 2 126506219 126506350 + 116895099 MODEL JAAIVD010000001;XR_004387260 snorna 625939129 LOC116912999 small nucleolar RNA SNORA17 11 91853616 91853722 - 116912999 MODEL JAAIVD010000006 pseudo 625939130 Ldlrap1 low density lipoprotein receptor adaptor protein 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); AP-1 adaptor complex binding (ortholog); AP-2 adaptor complex binding (ortholog); INVOLVED IN amyloid precursor protein metabolic process (ortholog); cellular response to cytokine stimulus (ortholog); cholesterol homeostasis (ortholog); ASSOCIATED WITH autosomal recessive hypercholesterolemia (ortholog); familial hypercholesterolemia (ortholog); Hypercholesterolemia (ortholog); FOUND IN axon (ortholog); basal plasma membrane (ortholog); cytoplasm (ortholog) 1 23487123 23508185 + 30032202 116894661 MODEL JAAIVD010000025;XM_032896367 XP_032752258 low density lipoprotein receptor adapter protein 1 protein-coding 625939143 Eif1ad eukaryotic translation initiation factor 1A domain containing ASSOCIATED WITH melanoma (ortholog); FOUND IN nucleoplasm (ortholog) 2 2303564 2307570 - 22301074;30032202 116890723 MODEL JAAIVD010000001;XM_032891177 XP_032747068 probable RNA-binding protein EIF1AD protein-coding 625939153 LOC116909661 uncharacterized LOC116909661 9 80146891 80149671 - 116909661 MODEL JAAIVD010000002;XR_004389088 ncrna 625939157 Psmd4 proteasome 26S subunit ubiquitin receptor, non-ATPase 4 ENCODES a protein that exhibits identical protein binding (ortholog); molecular adaptor activity (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog) 3 62207553 62216598 + 30032202 116896571 MODEL JAAIVD010000012;XM_032897782;XM_032897783 XP_032753673;XP_032753674 26S proteasome non-ATPase regulatory subunit 4;proteasome 26S subunit, non-ATPase 4 protein-coding 625939172 Mark2 microtubule affinity regulating kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein serine kinase activity (ortholog); INVOLVED IN axon development (ortholog); establishment of cell polarity (ortholog); establishment or maintenance of cell polarity regulating cell shape (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN actin filament (ortholog); basal cortex (ortholog); cytoplasm (ortholog) 2 452083 517501 + 22301074;30032202 116894796 MODEL JAAIVD010000001;XM_032896448;XM_032896449;XM_032896450;XM_032896451;XM_032896452;XM_032896453;XM_032896454;XM_032896455;XM_032896457 XP_032752339;XP_032752340;XP_032752341;XP_032752342;XP_032752343;XP_032752344;XP_032752345;XP_032752346;XP_032752348 serine/threonine-protein kinase MARK2 protein-coding 625939215 LOC116910007 CMRF-35-like molecule 4 9 69248466 69252923 + 30032202 116910007 MODEL JAAIVD010000002;XM_032913793 XP_032769684 protein-coding 625939222 LOC116903277 uncharacterized LOC116903277 6 23058168 23080210 - 116903277 MODEL JAAIVD010000024;XR_004388265 ncrna 625939227 Plscr5 phospholipid scramblase family member 5 8 83879196 83895748 + 22301074;30032202 116908235 MODEL JAAIVD010000027;XM_032911496 XP_032767387 protein-coding 625939238 Sema6d semaphorin 6D ENCODES a protein that exhibits receptor ligand activity (ortholog); semaphorin receptor binding (ortholog); INVOLVED IN negative regulation of axon extension (ortholog); negative regulation of smooth muscle cell migration (ortholog); positive regulation of smooth muscle cell migration (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); substance-related disorder (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog) 5 102942545 102999495 + 30032202 116901898 MODEL JAAIVD010000023;XM_032904107;XM_032904108 XP_032759998;XP_032759999 semaphorin-6D protein-coding 625939265 LOC116904178 ADP-ribosylation factor 1-like 6 151030528 151031385 - 22301074;30032202 116904178 MODEL JAAIVD010000024;XM_032907087 XP_032762978 protein-coding 625939270 LOC116908968 keratin-associated protein 9-7-like 9 54632676 54633218 + 22301074 116908968 MODEL JAAIVD010000002;XM_032912430 XP_032768321 protein-coding 625939273 LOC116903222 sentrin-specific protease 2-like 6 19621573 19622995 + 116903222 MODEL JAAIVD010000024 pseudo 625939274 Gpatch1 G-patch domain containing 1 FOUND IN catalytic step 2 spliceosome (ortholog) 2 163351249 163399794 + 22301074;30032202 116892269 MODEL JAAIVD010000001;XM_032893858 XP_032749749 G patch domain-containing protein 1 protein-coding 625939298 LOC116890226 transcription factor BTF3-like 1 270221872 270222401 + 116890226 MODEL JAAIVD010000025 pseudo 625939299 LOC116887691 thioredoxin-like protein 4A 18 23996735 23997193 + 22301074;30032202 116887691 MODEL JAAIVD010000013;XM_032889287 XP_032745178 protein-coding 625939303 LOC116885238 39S ribosomal protein L23, mitochondrial-like 16 27381013 27381443 + 116885238 MODEL JAAIVD010000004 pseudo 625939304 Ccdc172 coiled-coil domain containing 172 ASSOCIATED WITH Meckel syndrome (ortholog); FOUND IN cytoplasm (ortholog); sperm midpiece (ortholog) 2 57545958 57609842 - 30032202 116893840 MODEL JAAIVD010000001;XM_032895558;XM_032895559;XM_032895560 XP_032751449;XP_032751450;XP_032751451 coiled-coil domain-containing protein 172 protein-coding 625939326 LOC116886971 histone deacetylase 1-like 18 37933235 37934803 + 116886971 MODEL JAAIVD010000013 pseudo 625939327 LOC116887288 60S ribosomal protein L31-like 18 42580278 42580840 - 22301074;30032202 116887288 MODEL JAAIVD010000013;XM_032888867 XP_032744758 protein-coding 625939333 Epb41l5 erythrocyte membrane protein band 4.1 like 5 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actomyosin structure organization (ortholog); apical constriction (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cell leading edge (ortholog); focal adhesion (ortholog); plasma membrane (ortholog) 10 12136548 12227132 - 22301074 116910853 MODEL JAAIVD010000005;XM_032914610;XM_032914611;XM_032914612 XP_032770501;XP_032770502;XP_032770503 band 4.1-like protein 5 protein-coding 625939368 Klhl24 kelch like family member 24 INVOLVED IN intermediate filament organization (ortholog); protein autoubiquitination (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); epidermolysis bullosa simplex generalized type (ortholog); Generalized Epidermolysis Bullosa Simplex 6 with Scarring and Hair Loss (ortholog); FOUND IN adherens junction (ortholog); Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) 4 4900156 4930071 + 22301074 116898685 MODEL JAAIVD010000003;XM_032899943 XP_032755834 kelch-like protein 24 protein-coding 625939380 LOC116888073 RPA-related protein RADX-like X 89815534 89944165 + 22301074;30032202 116888073 MODEL JAAIVD010000014;XM_032889451 XP_032745342 protein-coding 625939393 Allc allantoicase ENCODES a protein that exhibits allantoicase activity (ortholog); INVOLVED IN response to calcium ion (ortholog); response to magnesium ion (ortholog); response to pH (ortholog) 7 41994821 42024370 - 22301074;30032202 116905652 MODEL JAAIVD010000026;XM_032908625 XP_032764516 probable allantoicase protein-coding 625939408 LOC116889847 T-complex protein 1 subunit zeta-like 1 151409034 151410666 - 116889847 MODEL JAAIVD010000025 pseudo 625939409 LOC116888551 ubiquitin-conjugating enzyme E2 G1-like 1 42273815 42274333 - 116888551 MODEL JAAIVD010000025 pseudo 625939410 Arhgap35 Rho GTPase activating protein 35 ENCODES a protein that exhibits GTPase activating protein binding (ortholog); GTPase activator activity (ortholog); phospholipid binding (ortholog); INVOLVED IN axon guidance (ortholog); axonal fasciculation (ortholog); camera-type eye development (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; platelet-derived growth factor signaling pathway; ASSOCIATED WITH Anophthalmia (ortholog); lung adenocarcinoma (ortholog); Martsolf syndrome 1 (ortholog); FOUND IN actin cytoskeleton (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) 2 172447176 172570335 + 22301074 116892594 MODEL JAAIVD010000001;XM_032894374 XP_032750265 rho GTPase-activating protein 35 protein-coding 625939421 LOC116887302 eukaryotic translation initiation factor 3 subunit I-like 18 3096155 3097100 - 116887302 MODEL JAAIVD010000013 pseudo 625939422 LOC116899847 small nucleolar RNA SNORA17 4 175011384 175011515 - 116899847 MODEL JAAIVD010000003;XR_004387843 snorna 625939425 Acsl1 acyl-CoA synthetase long chain family member 1 ENCODES a protein that exhibits arachidonate-CoA ligase activity (ortholog); long-chain fatty acid-CoA ligase activity (ortholog); oleoyl-CoA ligase activity (ortholog); INVOLVED IN adiponectin-activated signaling pathway (ortholog); fatty acid biosynthetic process (ortholog); fatty acid metabolic process (ortholog); PARTICIPATES IN adrenoleukodystrophy pathway; carnitine palmitoyltransferase I deficiency pathway; carnitine-acylcarnitine translocase deficiency; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); cardiomyopathy (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); mitochondrial outer membrane (ortholog) 13 41382668 41448782 - 30032202 116914233 MODEL JAAIVD010000008;XM_032918427 XP_032774318 long-chain-fatty-acid--CoA ligase 1 protein-coding 625939450 LOC116907766 olfactory receptor 10G4-like 8 82819004 82819936 - 22301074 116907766 MODEL JAAIVD010000027;XM_032910905 XP_032766796 protein-coding 625939453 Fn3krp fructosamine 3 kinase related protein ENCODES a protein that exhibits kinase activity (inferred); protein-ribulosamine 3-kinase activity (inferred) 9 62602129 62610850 - 116909706 A0A8A1UIZ2 MODEL JAAIVD010000002;XM_032913376 XP_032769267 ketosamine-3-kinase protein-coding 625939463 C2cd4a C2 calcium dependent domain containing 4A INVOLVED IN positive regulation of acute inflammatory response (ortholog); regulation of cell adhesion (ortholog); regulation of vascular permeability involved in acute inflammatory response (ortholog); ASSOCIATED WITH esophageal atresia (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 8 62199237 62201083 - 116907986 MODEL JAAIVD010000027;XM_032911230 XP_032767121 C2 calcium-dependent domain-containing protein 4A protein-coding 625939469 LOC116913468 SNRPN upstream reading frame protein-like 12 27876432 27876634 - 116913468 MODEL JAAIVD010000007 pseudo 625939470 LOC116893477 cytochrome c oxidase assembly protein COX14-like 2 180648360 180648565 - 30032202 116893477 MODEL JAAIVD010000001;XM_032895233 XP_032751124 protein-coding 625939473 Dnah1 dynein axonemal heavy chain 1 INVOLVED IN cilium movement involved in cell motility (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH Asthenozoospermia (ortholog); Kartagener syndrome (ortholog); oligospermia (ortholog); FOUND IN axoneme (ortholog); inner dynein arm (ortholog); sperm flagellum (ortholog) 13 6963505 7024152 - 22301074;30032202 116914241 MODEL JAAIVD010000008;XM_032918449 XP_032774340 dynein heavy chain 1, axonemal protein-coding 625939555 Kyat1 kynurenine aminotransferase 1 ENCODES a protein that exhibits cysteine-S-conjugate beta-lyase activity (ortholog); L-glutamine:phenylpyruvate transaminase activity (ortholog); L-kynurenine:2-oxoglutarate transaminase activity (ortholog); INVOLVED IN kynurenine metabolic process (ortholog); pyruvate catabolic process (ortholog); response to bacterium (ortholog); PARTICIPATES IN kynurenine metabolic pathway; ASSOCIATED WITH carcinoma (ortholog); Experimental Arthritis (ortholog); Kidney Neoplasms (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) 5 5413515 5440008 + 22301074;30032202 116901191 MODEL JAAIVD010000023;XM_032902883 XP_032758774 kynurenine--oxoglutarate transaminase 1 protein-coding 625939572 Fbxo31 F-box protein 31 ENCODES a protein that exhibits cyclin binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); cellular response to oxidative stress (ortholog); DNA damage response (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 45 (ortholog); congenital nongoitrous hypothyroidism 2 (ortholog); spastic cerebral palsy (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); neuronal cell body (ortholog) 17 41216412 41243879 - 22301074 116886227 MODEL JAAIVD010000011;XM_032887619 XP_032743510 F-box only protein 31 protein-coding 625939585 Trnae-cuc transfer RNA glutamic acid (anticodon CUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 5 142162708 142162779 + 116902678 MODEL JAAIVD010000023 trna 625939586 Pak2 p21 (RAC1) activated kinase 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN adherens junction assembly (ortholog); bicellular tight junction assembly (ortholog); cardiac muscle hypertrophy (ortholog); PARTICIPATES IN vascular endothelial growth factor signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); autism spectrum disorder (ortholog); Breast Neoplasms (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) 4 16846603 16907483 - 22301074;30032202 116898764 MODEL JAAIVD010000003;XM_032900093;XM_032900094;XM_032900096 XP_032755984;XP_032755985;XP_032755987 serine/threonine-protein kinase PAK 2 protein-coding 625939612 Trnaa-agc transfer RNA alanine (anticodon AGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 11 34013881 34013953 - 116913058 MODEL JAAIVD010000006 trna 625939613 LOC116910500 CMRF35-like molecule 7 9 69281149 69291031 + 30032202 116910500 MODEL JAAIVD010000002;XM_032914394;XM_032914395;XM_032914396 XP_032770285;XP_032770286;XP_032770287 protein-coding 625939629 LOC116892815 uncharacterized LOC116892815 2 187993615 188005403 - 116892815 MODEL JAAIVD010000001;XR_004386972 ncrna 625939633 LOC116884086 small nucleolar RNA SNORA17 14 55706152 55706277 + 116884086 MODEL JAAIVD010000009;XR_004385829 snorna 625939636 LOC116911999 DNA (cytosine-5)-methyltransferase 3A-like 11 50146762 50148902 + 116911999 MODEL JAAIVD010000006 pseudo 625939637 Gmfb glia maturation factor beta INVOLVED IN learning (ortholog); locomotory behavior (ortholog) 12 76235160 76248845 + 22301074;30032202 116913350 MODEL JAAIVD010000007;XM_032917505;XM_032917506 XP_032773396;XP_032773397 protein-coding 625939650 Egfl8 EGF like domain multiple 8 INVOLVED IN in utero embryonic development (ortholog) 18 7295750 7298105 - 22301074;30032202 116886830 MODEL JAAIVD010000013;XM_032888269;XM_032888270 XP_032744160;XP_032744161 epidermal growth factor-like protein 8 protein-coding 625939665 LOC116909753 olfactory receptor 4D2-like 9 82901205 82902140 + 22301074 116909753 MODEL JAAIVD010000002;XM_032913439 XP_032769330 protein-coding 625939668 LOC116889710 protein translocase subunit SecA-like 22301074;30032202 116889710 MODEL JAAIVD010000059;XM_032890591 XP_032746482 protein-coding 625939669 Ydjc YdjC chitooligosaccharide deacetylase homolog 4 2432535 2441398 + 22301074;30032202 116898629 MODEL JAAIVD010000003;XM_032899843;XM_032899844;XM_032899845;XM_032899846;XM_032899847;XM_032899848 XP_032755734;XP_032755735;XP_032755736;XP_032755737;XP_032755738;XP_032755739 carbohydrate deacetylase protein-coding 625939701 Art1 ADP-ribosyltransferase 1 ENCODES a protein that exhibits NAD+ poly-ADP-ribosyltransferase activity (ortholog); FOUND IN cell surface (ortholog); membrane (ortholog) 2 100406873 100411340 + 22301074;30032202 116893971 MODEL JAAIVD010000001;XM_032895689 XP_032751580 GPI-linked NAD(P)(+)--arginine ADP-ribosyltransferase 1 protein-coding 625939709 LOC116894981 small nucleolar RNA SNORA2/SNORA34 family 2 146200308 146200443 - 116894981 MODEL JAAIVD010000001;XR_004387172 snorna 625939712 Cdon cell adhesion associated, oncogene regulated ENCODES a protein that exhibits coreceptor activity (ortholog); protein carrier activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); cell adhesion (ortholog); cell fate specification (ortholog); PARTICIPATES IN Hedgehog signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH coloboma (ortholog); gastrointestinal stromal tumor (ortholog); genetic disease (ortholog); FOUND IN cell surface (ortholog) 8 30961969 31048020 + 22301074;30032202 116906596 MODEL JAAIVD010000027;XM_032909338 XP_032765229 cell adhesion molecule-related/down-regulated by oncogenes protein-coding 625939736 LOC116894944 small nucleolar RNA SNORD116 2 140035855 140035944 + 116894944 MODEL JAAIVD010000001;XR_004387141 snorna 625939739 Htr2c 5-hydroxytryptamine receptor 2C ENCODES a protein that exhibits 1-(4-iodo-2,5-dimethoxyphenyl)propan-2-amine binding (ortholog); G protein-coupled serotonin receptor activity (ortholog); Gq/11-coupled serotonin receptor activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); behavioral fear response (ortholog); behavioral response to nicotine (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); G protein-coupled serotonin receptor complex (ortholog) X 98050130 98051315 + 22301074;30032202 116888854 MODEL JAAIVD010000014;XM_032890123 XP_032746014 protein-coding 625939743 Fmod fibromodulin INVOLVED IN odontogenesis of dentin-containing tooth (ortholog); skin development (ortholog); ASSOCIATED WITH Diabetic Nephropathies (ortholog); gingivitis (ortholog); periodontitis (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) 10 1640845 1652315 - 22301074;30032202 116911483 MODEL JAAIVD010000005;XM_032915465 XP_032771356 protein-coding 625939750 LOC116913223 immunoglobulin kappa light chain-like 12 71298397 71308710 - 116913223 MODEL JAAIVD010000007;XM_032917398 XP_032773289 protein-coding 625939755 Prss27 serine protease 27 FOUND IN plasma membrane (ortholog) 9 1333094 1340440 + 22301074 116909744 MODEL JAAIVD010000002;XM_032913423 XP_032769314 protein-coding 625939765 Whrn whirlin ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN auditory receptor cell stereocilium organization (ortholog); cerebellar Purkinje cell layer formation (ortholog); detection of mechanical stimulus involved in sensory perception of sound (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH Aland Island eye disease (ortholog); autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 31 (ortholog); FOUND IN actin filament (ortholog); apical dendrite (ortholog); axon collateral (ortholog) 1 90089102 90172093 + 22301074;30032202 116901261 MODEL JAAIVD010000025;XM_032903020;XM_032903028;XM_032903037;XM_032903045;XM_032903054 XP_032758911;XP_032758919;XP_032758928;XP_032758936;XP_032758945 protein-coding 625939790 Mad2l2 mitotic arrest deficient 2 like 2 ENCODES a protein that exhibits JUN kinase binding (ortholog); protein-macromolecule adaptor activity (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN actin filament organization (ortholog); DNA damage response, signal transduction resulting in transcription (ortholog); double-strand break repair (ortholog); ASSOCIATED WITH Asthenozoospermia (ortholog); Fanconi anemia complementation group V (ortholog); oligospermia (ortholog); FOUND IN anaphase-promoting complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 12635583 12648863 - 30032202 116892868 MODEL JAAIVD010000025;XM_032894773 XP_032750664 mitotic spindle assembly checkpoint protein MAD2B protein-coding 625939805 LOC116907383 uncharacterized LOC116907383 8 34642530 34655937 + 116907383 MODEL JAAIVD010000027;XR_004388821;XR_004388822 ncrna 625939815 LOC116888321 cytochrome c oxidase subunit 7B, mitochondrial INVOLVED IN central nervous system development (ortholog); ASSOCIATED WITH genetic disease (ortholog); linear skin defects with multiple congenital anomalies 1 (ortholog); linear skin defects with multiple congenital anomalies 2 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) X 65568803 65574775 + 22301074;30032202 116888321 MODEL JAAIVD010000014;XM_032889594 XP_032745485 protein-coding 625939822 Kcnd1 potassium voltage-gated channel subfamily D member 1 ENCODES a protein that exhibits A-type (transient outward) potassium channel activity (ortholog); PARTICIPATES IN excitatory synaptic transmission pathway; long term potentiation; ASSOCIATED WITH Dwarfism (ortholog); FOUND IN neuronal cell body (ortholog); voltage-gated potassium channel complex (ortholog) X 14297063 14309966 - 22301074;30032202 116889123 MODEL JAAIVD010000014;XM_032890295 XP_032746186 protein-coding 625939832 LOC116899511 sterol 26-hydroxylase, mitochondrial ENCODES a protein that exhibits cholestanetetraol 26-dehydrogenase activity (ortholog); cholesterol 26-hydroxylase activity (ortholog); heme binding (ortholog); INVOLVED IN bile acid biosynthetic process (ortholog); bile acid metabolic process (ortholog); calcitriol biosynthetic process from calciol (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; bile acid signaling pathway; cerebrotendinous xanthomatosis pathway; ASSOCIATED WITH atherosclerosis (ortholog); autism spectrum disorder (ortholog); cerebrotendinous xanthomatosis (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 4 148129007 148157627 + 22301074;30032202 116899511 MODEL JAAIVD010000003;XM_032901366;XM_032901367;XR_004387731 XP_032757257;XP_032757258 protein-coding 625939850 Tbc1d22b TBC1 domain family member 22B ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); INVOLVED IN regulation of cilium assembly (ortholog) 18 4260152 4312585 - 30032202 116887042 MODEL JAAIVD010000013;XM_032888534 XP_032744425 protein-coding 625939867 Crybg1 crystallin beta-gamma domain containing 1 ASSOCIATED WITH Disease Progression (ortholog); melanoma (ortholog) 18 43645888 43697826 - 116887052 MODEL JAAIVD010000013;XM_032888543 XP_032744434 beta/gamma crystallin domain-containing protein 1 protein-coding 625939891 Smco1 single-pass membrane protein with coiled-coil domains 1 4 17090752 17093358 + 116897854 MODEL JAAIVD010000003;XM_032899262 XP_032755153 single-pass membrane and coiled-coil domain-containing protein 1 protein-coding 625939896 LOC116903607 ferritin heavy chain-like 6 100140305 100141797 + 116903607 MODEL JAAIVD010000024 pseudo 625939897 LOC116885371 glyceraldehyde-3-phosphate dehydrogenase-like 1 43194313 43246541 - 116885371 MODEL JAAIVD010000025 pseudo 625939898 LOC116906178 prohibitin-like 7 108564078 108564931 + 116906178 MODEL JAAIVD010000026 pseudo 625939899 LOC116906482 small Cajal body-specific RNA 3 7 94472417 94472555 - 116906482 MODEL JAAIVD010000026;XR_004388725 ncrna 625939902 Gpatch2l G-patch domain containing 2 like 7 100332884 100375259 + 116905306 MODEL JAAIVD010000026;XM_032908190 XP_032764081 G patch domain-containing protein 2-like protein-coding 625939916 Irf9 interferon regulatory factor 9 ENCODES a protein that exhibits RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN type II interferon signaling pathway; ASSOCIATED WITH acute pancreatitis (ortholog); Experimental Colitis (ortholog); familial hyperlipidemia (ortholog); FOUND IN cytosol (ortholog) 12 69396592 69403040 - 22301074;30032202 116913312 MODEL JAAIVD010000007;XM_032917451;XM_032917452;XM_032917453;XM_032917455 XP_032773342;XP_032773343;XP_032773344;XP_032773346 protein-coding 625939938 Bcl7a BAF chromatin remodeling complex subunit BCL7A INVOLVED IN cellular respiration (ortholog); cognition (ortholog); energy homeostasis (ortholog); FOUND IN SWI/SNF complex (ortholog) 16 30473164 30505789 - 116885455 MODEL JAAIVD010000004;XM_032886739 XP_032742630 B-cell CLL/lymphoma 7 protein family member A protein-coding 625939948 Topaz1 testis and ovary specific TOPAZ 1 INVOLVED IN apoptotic process (ortholog); lncRNA transcription (ortholog); spermatocyte division (ortholog) 8 113854527 113909620 + 30032202 116908011 MODEL JAAIVD010000027;XM_032911269 XP_032767160 protein TOPAZ1;testis and ovary specific PAZ domain containing 1 protein-coding 625939972 Lbr lamin B receptor ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); chromo shadow domain binding (ortholog); Delta14-sterol reductase activity (ortholog); INVOLVED IN cholesterol biosynthetic process (ortholog); cholesterol biosynthetic process via desmosterol (ortholog); neutrophil differentiation (ortholog); PARTICIPATES IN cholesterol biosynthetic pathway; histone modification pathway; ASSOCIATED WITH Anadysplasia-Like, Spontaneously Remitting Spondylometaphyseal Dysplasia (ortholog); asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 1 (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) 10 60150521 60173488 - 22301074;30032202 116911196 MODEL JAAIVD010000005;XM_032915067 XP_032770958 delta(14)-sterol reductase LBR protein-coding 625939990 LOC116883572 histone H2B type 1-C/E/F/G/I 14 42593271 42593667 + 22301074;30032202 116883572 MODEL JAAIVD010000009;XM_032884754 XP_032740645 protein-coding 625939995 LOC116907377 olfactory receptor 18-like 8 16582834 16583802 - 22301074;30032202 116907377 MODEL JAAIVD010000027;XM_032910330 XP_032766221 protein-coding 625939999 Il2rg interleukin 2 receptor subunit gamma ENCODES a protein that exhibits coreceptor activity (ortholog); interleukin-15 receptor activity (ortholog); interleukin-2 binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); cellular homeostasis (ortholog); interleukin-15-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-2 signaling pathway; interleukin-4 signaling pathway; ASSOCIATED WITH combined immunodeficiency (ortholog); combined T cell and B cell immunodeficiency (ortholog); COVID-19 (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) X 59274899 59278707 + 22301074;30032202 116888510 MODEL JAAIVD010000014;XM_032889802;XM_032889804 XP_032745693;XP_032745695 cytokine receptor common subunit gamma protein-coding 625940014 LOC116894216 olfactory receptor 502 2 106616754 106617698 - 22301074;30032202 116894216 MODEL JAAIVD010000001;XM_032895929 XP_032751820 protein-coding 625940017 LOC116890203 40S ribosomal protein S25-like 1 261678264 261683752 + 116890203 MODEL JAAIVD010000025 pseudo 625940018 LOC116897730 transmembrane protein 234-like 4 90428157 90428466 + 116897730 MODEL JAAIVD010000003 pseudo 625940019 Rax retina and anterior neural fold homeobox ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN brain development (ortholog); camera-type eye development (ortholog); hypothalamus development (ortholog); ASSOCIATED WITH Anophthalmia (ortholog); Craniofacial Abnormalities (ortholog); genetic disease (ortholog); FOUND IN nucleus (ortholog) 15 65326543 65330369 + 22301074;30032202 116884750 MODEL JAAIVD010000010;XM_032885968 XP_032741859 retinal homeobox protein Rx protein-coding 625940025 Icam4 intercellular adhesion molecule 4 (Landsteiner-Wiener blood group) ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN cell-cell adhesion mediated by integrin (ortholog); heterotypic cell-cell adhesion (ortholog); leukocyte cell-cell adhesion (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); plasma membrane (ortholog) 8 17291686 17292866 + 22301074;30032202 116907744 MODEL JAAIVD010000027;XM_032910880 XP_032766771 intercellular adhesion molecule 4 protein-coding 625940032 LOC116887262 transcription factor BTF3-like 18 29092824 29093448 + 30032202 116887262 MODEL JAAIVD010000013;XM_032888828 XP_032744719 protein-coding 625940037 LOC116896013 annexin-2 receptor-like 3 176944947 176946284 - 116896013 MODEL JAAIVD010000012 pseudo 625940038 Stra8 stimulated by retinoic acid 8 INVOLVED IN activation of meiosis (ortholog); cellular response to retinoic acid (ortholog); male germ-line stem cell asymmetric division (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 6 104712717 104728107 - 22301074;30032202 116902896 MODEL JAAIVD010000024;XM_032905225 XP_032761116 stimulated by retinoic acid gene 8 protein homolog protein-coding 625940048 LOC116900343 olfactory receptor 10AG1-like 5 68924693 68925673 + 22301074 116900343 MODEL JAAIVD010000023;XM_032902097 XP_032757988 protein-coding 625940051 LOC116906388 small nucleolar RNA SNORD113/SNORD114 family 7 127246791 127246865 + 116906388 MODEL JAAIVD010000026;XR_004388658 snorna 625940054 LOC116886825 H/ACA ribonucleoprotein complex subunit 3-like 1 24442297 24442491 - 116886825 MODEL JAAIVD010000025 pseudo 625940055 LOC116913273 alpha-enolase-like 12 85300419 85303762 + 116913273 MODEL JAAIVD010000007 pseudo 625940056 Xrcc3 X-ray repair cross complementing 3 ENCODES a protein that exhibits crossover junction DNA endonuclease activity (ortholog); four-way junction DNA binding (ortholog); INVOLVED IN DNA repair (ortholog); double-strand break repair via homologous recombination (ortholog); interstrand cross-link repair (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; ASSOCIATED WITH basal cell carcinoma (ortholog); brain glioma (ortholog); breast cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nuclear replication fork (ortholog) 7 129402078 129410376 - 22301074;30032202 116905500 MODEL JAAIVD010000026;XM_032908520 XP_032764411 DNA repair protein XRCC3 protein-coding 625940067 Zscan25 zinc finger and SCAN domain containing 25 16 8017304 8028019 - 30032202 116885641 MODEL JAAIVD010000004;XM_032886950 XP_032742841 zinc finger and SCAN domain-containing protein 25 protein-coding 625940077 LOC116904707 small nucleolar RNA SNORA17 6 46519365 46519496 + 116904707 MODEL JAAIVD010000024;XR_004388402 snorna 625940080 Dhh desert hedgehog signaling molecule ENCODES a protein that exhibits calcium ion binding (ortholog); patched binding (ortholog); zinc ion binding (ortholog); INVOLVED IN Leydig cell differentiation (ortholog); male sex determination (ortholog); multicellular organism development (ortholog); PARTICIPATES IN altered Hedgehog signaling pathway; Hedgehog signaling pathway; ASSOCIATED WITH 46,XY complete gonadal dysgenesis (ortholog); 46,XY gonadal dysgenesis with minifascicular neuropathy (ortholog); 46,XY sex reversal 7 (ortholog); FOUND IN plasma membrane (ortholog) 1 271719745 271724190 - 22301074;30032202 116890247 MODEL JAAIVD010000025;XM_032890973 XP_032746864 desert hedgehog protein protein-coding 625940087 Tnr tenascin R ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN associative learning (ortholog); extracellular matrix organization (ortholog); locomotory exploration behavior (ortholog); ASSOCIATED WITH genetic disease (ortholog); Gliosis (ortholog); NEURODEVELOPMENTAL DISORDER, NONPROGRESSIVE, WITH SPASTICITY AND TRANSIENT OPISTHOTONUS (ortholog); FOUND IN cell surface (ortholog); extracellular matrix (ortholog); glutamatergic synapse (ortholog) 10 38841420 39228742 + 22301074 116910887 MODEL JAAIVD010000005;XM_032914659 XP_032770550 tenascin-R protein-coding 625940114 Rnps1 RNA binding protein with serine rich domain 1 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); RNA binding (ortholog); INVOLVED IN negative regulation of mRNA splicing, via spliceosome (ortholog); nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); positive regulation of apoptotic process (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN ASAP complex (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 9 1704213 1714510 + 22301074;30032202 116909106 MODEL JAAIVD010000002;XM_032912581;XM_032912582 XP_032768472;XP_032768473 RNA-binding protein with serine-rich domain 1 protein-coding 625940129 Parp1 poly(ADP-ribose) polymerase 1 ENCODES a protein that exhibits chromatin binding (ortholog); damaged DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN apoptotic process (ortholog); ATP generation from poly-ADP-D-ribose (ortholog); base-excision repair (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Experimental Pancreatitis (ortholog); acute kidney failure (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 10 58901223 58933123 + 22301074 116911109 MODEL JAAIVD010000005;XM_032914949 XP_032770840 poly [ADP-ribose] polymerase 1 protein-coding 625940156 Fkbp9 FKBP prolyl isomerase 9 ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN protein folding (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN endoplasmic reticulum (ortholog) 6 84139946 84188436 - 22301074 116903743 MODEL JAAIVD010000024;XM_032906427 XP_032762318 peptidyl-prolyl cis-trans isomerase FKBP9 protein-coding 625940170 LOC116899868 small nucleolar RNA SNORA17 4 122144786 122144918 + 116899868 MODEL JAAIVD010000003;XR_004387862 snorna 625940173 Tmem44 transmembrane protein 44 4 15446714 15481987 - 116898747 MODEL JAAIVD010000003;XM_032900065;XM_032900066 XP_032755956;XP_032755957 protein-coding 625940191 Hes6 hes family bHLH transcription factor 6 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cell differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); nervous system development (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); FOUND IN transcription regulator complex (ortholog) 4 163407054 163408785 - 22301074;30032202 116899639 MODEL JAAIVD010000003;XM_032901635;XM_032901636 XP_032757526;XP_032757527 transcription cofactor HES-6 protein-coding 625940202 Tiam1 TIAM Rac1 associated GEF 1 ENCODES a protein that exhibits ephrin receptor binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); kinase binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); brain-derived neurotrophic factor receptor signaling pathway (ortholog); cardiac muscle hypertrophy (ortholog); PARTICIPATES IN brain-derived neurotrophic factor signaling pathway; E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); Mouth Neoplasms (ortholog); neurodevelopmental disorder with language delay and seizures (ortholog); FOUND IN axonal growth cone (ortholog); cell junction (ortholog); cell-cell contact zone (ortholog) 4 54606893 54789415 + 22301074;30032202 116899013 MODEL JAAIVD010000003;XM_032900461;XM_032900462 XP_032756352;XP_032756353 T-lymphoma invasion and metastasis-inducing protein 1 protein-coding 625940238 Zdhhc5 zDHHC palmitoyltransferase 5 ENCODES a protein that exhibits palmitoyltransferase activity (ortholog); protein-cysteine S-palmitoyltransferase activity (ortholog); INVOLVED IN positive regulation of NLRP3 inflammasome complex assembly (ortholog); positive regulation of pattern recognition receptor signaling pathway (ortholog); positive regulation of protein localization to phagocytic vesicle (ortholog); FOUND IN dendrite (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) 5 62069978 62093177 - 22301074;30032202 116901585 MODEL JAAIVD010000023;XM_032903601 XP_032759492 palmitoyltransferase ZDHHC5;zinc finger DHHC-type palmitoyltransferase 5 protein-coding 625940253 Nxn nucleoredoxin ENCODES a protein that exhibits thioredoxin-disulfide reductase (NADPH) activity (ortholog); INVOLVED IN circulatory system development (ortholog); in utero embryonic development (ortholog); negative regulation of protein ubiquitination (ortholog); ASSOCIATED WITH autosomal recessive Robinow syndrome 2 (ortholog); basal cell carcinoma (ortholog); Colorectal Neoplasms (ortholog); FOUND IN nucleus (ortholog) 9 94963609 95105208 - 22301074 116910494 MODEL JAAIVD010000002;XM_032914385 XP_032770276 protein-coding 625940265 LOC116913924 ribonuclease pancreatic delta-type ENCODES a protein that exhibits endonuclease activity (inferred); hydrolase activity (inferred); lyase activity (inferred); INVOLVED IN defense response to Gram-positive bacterium (inferred); FOUND IN extracellular region (inferred) 12 72183919 72186530 + 22301074;30032202 116913924 Q8VD86 MODEL AJ315463;JAAIVD010000007;XM_032918192 CAC86444;Q8VD86;XP_032774083 RNase 1 delta;pancreatic ribonuclease delta protein-coding 625940271 LOC116894565 leukocyte immunoglobulin-like receptor subfamily B member 3-like 2 178596242 178610001 + 30032202 116894565 MODEL JAAIVD010000001;XM_032896275;XM_032896276;XM_032896278 XP_032752166;XP_032752167;XP_032752169 leukocyte immunoglobulin-like receptor subfamily B member 3A protein-coding 625940288 N4bp3 NEDD4 binding protein 3 FOUND IN cytoplasmic vesicle (ortholog) 9 34230179 34233165 - 30032202 116909928 MODEL JAAIVD010000002;XM_032913697 XP_032769588 NEDD4-binding protein 3 protein-coding 625940296 Clstn3 calsyntenin 3 ENCODES a protein that exhibits cell-cell adhesion mediator activity (ortholog); enzyme inhibitor activity (ortholog); neurexin family protein binding (ortholog); INVOLVED IN adaptive thermogenesis (ortholog); cold-induced thermogenesis (ortholog); excitatory synapse assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 6 23320049 23353227 + 22301074;30032202 116903292 MODEL JAAIVD010000024;XM_032905713 XP_032761604 calsyntenin-3 protein-coding 625940318 LOC116895747 60S ribosomal protein L19-like 3 35555884 35561793 + 116895747 MODEL JAAIVD010000012 pseudo 625940319 LOC116884058 gap junction delta-4 protein-like 14 9768353 9770911 - 22301074;30032202 116884058 MODEL JAAIVD010000009;XM_032885305 XP_032741196 protein-coding 625940323 Pi4kb phosphatidylinositol 4-kinase beta ENCODES a protein that exhibits 1-phosphatidylinositol 4-kinase activity (ortholog); 14-3-3 protein binding (ortholog); INVOLVED IN inner ear development (ortholog); lysosome organization (ortholog); phosphatidylinositol phosphate biosynthetic process (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 87 (ortholog); Coronavirus infectious disease (ortholog); severe acute respiratory syndrome (ortholog); FOUND IN cytoplasmic side of trans-Golgi network membrane (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) 3 62241178 62273770 - 30032202 116896574 MODEL JAAIVD010000012;XM_032897789;XM_032897790;XM_032897791;XM_032897792;XM_032897793;XM_032897794 XP_032753680;XP_032753681;XP_032753682;XP_032753683;XP_032753684;XP_032753685 protein-coding 625940350 LOC116887850 E3 ubiquitin-protein ligase NRDP1-like X 41386984 41400884 - 116887850 MODEL JAAIVD010000014 pseudo 625940351 LOC116893549 ferritin heavy chain-like 2 207955430 207956328 - 116893549 MODEL JAAIVD010000001;XR_004386996 pseudo 625940354 Abcb1 ATP binding cassette subfamily B member 1 ENCODES a protein that exhibits ABC-type xenobiotic transporter activity (ortholog); ATP binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN adult heart development (ortholog); aldosterone secretion (ortholog); carboxylic acid transmembrane transport (ortholog); PARTICIPATES IN axitinib pharmacokinetics pathway; clopidogrel pharmacodynamics pathway; clopidogrel pharmacokinetics pathway; ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); acute lymphoblastic leukemia (ortholog); adrenocortical carcinoma (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); brush border membrane (ortholog) 6 140524309 140601425 + 22301074 116904144 MODEL JAAIVD010000024;XM_032907039 XP_032762930 ATP-dependent translocase ABCB1 protein-coding 625940385 Svbp small vasohibin binding protein ENCODES a protein that exhibits microtubule binding (ortholog); peptidase activator activity (ortholog); INVOLVED IN axon development (ortholog); brain development (ortholog); negative regulation of endothelial cell migration (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); microcephaly (ortholog); FOUND IN apical part of cell (ortholog) 1 37747886 37753756 - 30032202 116897711 MODEL JAAIVD010000025;XM_032899170;XM_032899175 XP_032755061;XP_032755066 small vasohibin-binding protein protein-coding 625940395 Prune2 prune homolog 2 with BCH domain ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN glutamatergic synapse (ortholog); presynapse (ortholog) 2 17061917 17311915 + 22301074;30032202 116891008 MODEL JAAIVD010000001;XM_032891689 XP_032747580 protein prune homolog 2 protein-coding 625940417 Diras1 DIRAS family GTPase 1 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); mitogen-activated protein kinase binding (ortholog); INVOLVED IN positive regulation of MAP kinase activity (ortholog); ASSOCIATED WITH early myoclonic encephalopathy (ortholog); FOUND IN plasma membrane (ortholog) 1 153861306 153865181 + 22301074;30032202 116904631 MODEL JAAIVD010000025;XM_032907428 XP_032763319 GTP-binding protein Di-Ras1 protein-coding 625940423 Slc25a29 solute carrier family 25 member 29 ENCODES a protein that exhibits basic amino acid transmembrane transporter activity (ortholog); high-affinity L-arginine transmembrane transporter activity (ortholog); high-affinity lysine transmembrane transporter activity (ortholog); INVOLVED IN carnitine transport (ortholog); L-arginine transmembrane transport (ortholog); L-histidine transmembrane transport (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog); FOUND IN mitochondrion (ortholog) 7 126510363 126520728 - 30032202 116905456 MODEL JAAIVD010000026;XM_032908412;XM_032908413;XM_032908414 XP_032764303;XP_032764304;XP_032764305 mitochondrial basic amino acids transporter protein-coding 625940437 Nim1k NIM1 serine/threonine protein kinase ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein serine/threonine kinase activity (ortholog) 3 177158603 177203756 + 22301074;30032202 116897164 MODEL JAAIVD010000012;XM_032898841;XM_032898842 XP_032754732;XP_032754733 serine/threonine-protein kinase NIM1 protein-coding 625940448 G3bp1 G3BP stress granule assembly factor 1 ENCODES a protein that exhibits DNA helicase activity (ortholog); DNA/RNA helicase activity (ortholog); molecular condensate scaffold activity (ortholog); INVOLVED IN defense response to virus (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of stress granule assembly (ortholog); ASSOCIATED WITH Disease Progression (ortholog); malignant astrocytoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) 9 37885529 37915960 + 30032202 116908681 MODEL JAAIVD010000002;XM_032911990 XP_032767881 ras GTPase-activating protein-binding protein 1 protein-coding 625940464 LOC116909114 coiled-coil-helix-coiled-coil-helix domain-containing protein 2-like 9 1208721 1209197 + 116909114 MODEL JAAIVD010000002 pseudo 625940465 Katnip katanin interacting protein ENCODES a protein that exhibits intraciliary transport particle B binding (ortholog); microtubule binding (ortholog); tubulin binding (ortholog); INVOLVED IN cerebrospinal fluid circulation (ortholog); negative regulation of motile cilium assembly (ortholog); ASSOCIATED WITH ciliopathy (ortholog); Joubert syndrome (ortholog); Joubert syndrome 1 (ortholog); FOUND IN 9+2 motile cilium (ortholog); ciliary basal body (ortholog); ciliary base (ortholog) 2 76059623 76222364 - 116891534 MODEL JAAIVD010000001;XM_032892686;XM_032892687;XM_032892688;XM_032892689 XP_032748577;XP_032748578;XP_032748579;XP_032748580 Kiaa0556 protein KIAA0556 homolog protein-coding 625940503 LOC116900851 60S ribosomal protein L30-like 5 62634065 62634543 - 116900851 MODEL JAAIVD010000023 pseudo 625940504 LOC116900395 olfactory receptor 4P4-like 5 69879790 69880721 - 22301074 116900395 MODEL JAAIVD010000023;XM_032902141 XP_032758032 protein-coding 625940508 Tomm20 translocase of outer mitochondrial membrane 20 ENCODES a protein that exhibits mitochondrion targeting sequence binding (ortholog); transmembrane protein transporter activity (ortholog); INVOLVED IN obsolete protein targeting to mitochondrion (ortholog); protein import into mitochondrial matrix (ortholog); protein localization to mitochondrion (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; carrier pathway of mitochondrial protein import; presequence pathway of mitochondrial protein import; ASSOCIATED WITH muscular atrophy (ortholog); FOUND IN cell periphery (ortholog); migrasome (ortholog); mitochondria-associated endoplasmic reticulum membrane contact site (ortholog) 17 46457609 46467433 - 22301074;30032202 116886072 MODEL JAAIVD010000011;XM_032887385 XP_032743276 mitochondrial import receptor subunit TOM20 homolog protein-coding 625940517 LOC116914315 60S ribosomal protein L4-like 13 41283470 41284674 + 116914315 MODEL JAAIVD010000008 pseudo 625940518 LOC116900295 olfactory receptor 8K3-like 5 63671224 63672178 - 116900295 MODEL JAAIVD010000023 pseudo 625940519 Cpped1 calcineurin like phosphoesterase domain containing 1 FOUND IN cytosol (ortholog); plasma membrane (ortholog) 9 10384251 10497938 + 22301074 116909726 MODEL JAAIVD010000002;XM_032913402 XP_032769293 serine/threonine-protein phosphatase CPPED1 protein-coding 625940527 LOC116885203 procollagen C-endopeptidase enhancer 1-like 16 16842989 16844987 + 22301074 116885203 MODEL JAAIVD010000004;XM_032886435 XP_032742326 protein-coding 625940535 LOC116902383 uncharacterized LOC116902383 5 154531465 154534854 + 116902383 MODEL JAAIVD010000023;XR_004388065 ncrna 625940540 Col13a1 collagen type XIII alpha 1 chain ENCODES a protein that exhibits heparin binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); cell-matrix adhesion (ortholog); endochondral ossification (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 19 (ortholog); genetic disease (ortholog); FOUND IN cell-cell junction (ortholog) 18 27663043 27802577 - 116887663 MODEL JAAIVD010000013;XM_032889262 XP_032745153 collagen alpha-1(XIII) chain protein-coding 625940583 LOC116908196 immunoglobulin superfamily DCC subclass member 3-like 8 59445845 59459816 + 30032202 116908196 MODEL JAAIVD010000027;XM_032911478 XP_032767369 protein-coding 625940591 Col8a2 collagen type VIII alpha 2 chain INVOLVED IN camera-type eye morphogenesis (ortholog); epithelial cell proliferation (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Corneal Dystrophy, Fuchs' Endothelial, 1 (ortholog); Fuchs' endothelial dystrophy (ortholog); genetic disease (ortholog) 1 31973958 31978597 - 22301074 116896627 MODEL JAAIVD010000025;XM_032897929 XP_032753820 collagen alpha-2(VIII) chain protein-coding 625940596 LOC116903669 60S ribosomal protein L31-like 6 3470914 3471297 + 22301074;30032202 116903669 MODEL JAAIVD010000024;XM_032906329 XP_032762220 protein-coding 625940600 Epb41l1 erythrocyte membrane protein band 4.1 like 1 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN regulation of exocytic insertion of neurotransmitter receptor to postsynaptic membrane (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 11 (ortholog); developmental and epileptic encephalopathy 11 (ortholog); intellectual disability (ortholog); FOUND IN parallel fiber to Purkinje cell synapse (ortholog); plasma membrane (ortholog); postsynapse (ortholog) 5 135767233 135887593 + 22301074;30032202 116902204 MODEL JAAIVD010000023;XM_032904582;XM_032904584;XM_032904585;XM_032904586;XM_032904587;XM_032904588;XM_032904589;XM_032904590;XM_032904591;XM_032904592;XM_032904593;XM_032904595 XP_032760473;XP_032760475;XP_032760476;XP_032760477;XP_032760478;XP_032760479;XP_032760480;XP_032760481;XP_032760482;XP_032760483;XP_032760484;XP_032760486 band 4.1-like protein 1 protein-coding 625940647 Sh2d4b SH2 domain containing 4B 13 19327157 19411095 - 30032202 116914944 MODEL JAAIVD010000008;XM_032919367 XP_032775258 SH2 domain-containing protein 4B protein-coding 625940659 Septin14 septin 14 INVOLVED IN neuron migration (ortholog); protein localization to perinuclear region of cytoplasm (ortholog); spermatid development (ortholog); ASSOCIATED WITH glioblastoma (ortholog); Parkinson's disease (ortholog); FOUND IN acrosomal vesicle (ortholog); axon (ortholog); cytoplasm (ortholog) 16 24270012 24293995 + 22301074;30032202 116885408 MODEL JAAIVD010000004;XM_032886694 XP_032742585 septin-14 protein-coding 625940673 Lrrc59 leucine rich repeat containing 59 ASSOCIATED WITH glioblastoma (ortholog); hepatocellular carcinoma (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrial nucleoid (ortholog) 9 50904063 50918504 - 22301074 116908832 MODEL JAAIVD010000002;XM_032912251 XP_032768142 leucine-rich repeat-containing protein 59 protein-coding 625940684 LOC116897904 transmembrane protein 258-like 4 33409151 33409539 - 22301074;30032202 116897904 MODEL JAAIVD010000003;XM_032899308 XP_032755199 protein-coding 625940689 LOC116910729 small nucleolar RNA SNORD91 family 9 93642606 93642696 + 116910729 MODEL JAAIVD010000002;XR_004389247 snorna 625940692 LOC116892706 leukocyte immunoglobulin-like receptor subfamily B member 3 2 178496413 178504078 + 30032202 116892706 MODEL JAAIVD010000001;XM_032894572 XP_032750463 protein-coding 625940710 Ifih1 interferon induced with helicase C domain 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); double-stranded RNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to exogenous dsRNA (ortholog); defense response to virus (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); Aicardi-Goutieres syndrome (ortholog); Aicardi-Goutieres Syndrome 7 (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) 5 40175101 40221913 - 22301074;30032202 116901451 MODEL JAAIVD010000023;XM_032903387 XP_032759278 interferon-induced helicase C domain-containing protein 1 protein-coding 625940732 Ppp1r1b protein phosphatase 1 regulatory inhibitor subunit 1B ENCODES a protein that exhibits D1 dopamine receptor binding (ortholog); D2 dopamine receptor binding (ortholog); D3 dopamine receptor binding (ortholog); INVOLVED IN behavioral response to cocaine (ortholog); cellular response to cocaine (ortholog); DNA-templated transcription (ortholog); PARTICIPATES IN dopamine signaling pathway; ASSOCIATED WITH bipolar disorder (ortholog); Brain Hypoxia-Ischemia (ortholog); brain infarction (ortholog); FOUND IN cytoplasm (ortholog); dendritic spine head (ortholog); dendritic spine neck (ortholog) 9 56035765 56044881 - 22301074;30032202 116909449 MODEL JAAIVD010000002;XM_032913028 XP_032768919 protein phosphatase 1 regulatory subunit 1B protein-coding 625940743 Unc5d unc-5 netrin receptor D INVOLVED IN axon guidance (ortholog); cell-cell adhesion (ortholog); pyramidal neuron differentiation (ortholog); FOUND IN cell surface (ortholog) 13 57459193 57989621 + 22301074;30032202 116914679 MODEL JAAIVD010000008;XM_032919093;XM_032919094 XP_032774984;XP_032774985 netrin receptor UNC5D protein-coding 625940768 Tmem140 transmembrane protein 140 6 104781278 104782627 - 116903971 MODEL JAAIVD010000024;XM_032906772 XP_032762663 protein-coding 625940773 LOC116894415 keratin-associated protein 19-2-like 2 158649427 158649747 - 116894415 MODEL JAAIVD010000001;XM_032896118 XP_032752009 protein-coding 625940776 LOC116900536 olfactory receptor 4F15-like 5 89594610 89595548 + 22301074 116900536 MODEL JAAIVD010000023;XM_032902263 XP_032758154 protein-coding 625940779 Lzic leucine zipper and CTNNBIP1 domain containing INVOLVED IN response to ionizing radiation (ortholog); ASSOCIATED WITH osteosarcoma (ortholog) 1 11273388 11286217 - 22301074;30032202 116892618 MODEL JAAIVD010000025;XM_032894428;XM_032894438;XM_032894447 XP_032750319;XP_032750329;XP_032750338 protein LZIC protein-coding 625940797 Srpra SRP receptor subunit alpha ASSOCIATED WITH Shwachman-Diamond syndrome (ortholog); FOUND IN membrane (ortholog); signal recognition particle receptor complex (ortholog) 8 30763331 30769382 + 22301074;30032202 116907785 MODEL JAAIVD010000027;XM_032910926 XP_032766817 signal recognition particle receptor subunit alpha protein-coding 625940815 Bms1 BMS1 ribosome biogenesis factor INVOLVED IN ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH ectodermal dysplasia (ortholog); nonsyndromic aplasia cutis congenita (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 6 28328848 28361313 + 22301074;30032202 116903350 MODEL JAAIVD010000024;XM_032905820 XP_032761711 ribosome biogenesis protein BMS1 homolog protein-coding 625940841 LOC116910267 protein FAM162A-like 9 34717355 34717975 + 116910267 MODEL JAAIVD010000002 pseudo 625940842 Cryaa crystallin alpha A ENCODES a protein that exhibits identical protein binding (ortholog); structural molecule activity (ortholog); unfolded protein binding (ortholog); INVOLVED IN actin filament organization (ortholog); apoptotic process (ortholog); apoptotic process involved in morphogenesis (ortholog); ASSOCIATED WITH autoimmune disease (ortholog); cataract (ortholog); cataract 9 multiple types (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 18 2172342 2176086 - 22301074;30032202 116887067 MODEL JAAIVD010000013;XM_032888567;XM_032888568;XM_032888569 XP_032744458;XP_032744459;XP_032744460 alpha-crystallin A chain protein-coding 625940856 LOC116901018 zinc finger protein 219-like 5 128514860 128517057 - 116901018 MODEL JAAIVD010000023 pseudo 625940857 LOC116893247 U6 snRNA-associated Sm-like protein LSm2 2 127319148 127319527 + 116893247 MODEL JAAIVD010000001 pseudo 625940858 LOC116903458 E3 ubiquitin-protein ligase PDZRN3-like 6 45677982 45702009 + 22301074;30032202 116903458 MODEL JAAIVD010000024;XM_032906011;XM_032906012 XP_032761902;XP_032761903 protein-coding 625940871 Entpd3 ectonucleoside triphosphate diphosphohydrolase 3 ENCODES a protein that exhibits apyrase activity (ortholog); nucleoside diphosphate phosphatase activity (ortholog); ribonucleoside triphosphate phosphatase activity (ortholog); INVOLVED IN nucleoside diphosphate catabolic process (ortholog); nucleoside triphosphate catabolic process (ortholog); ribonucleoside diphosphate catabolic process (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN plasma membrane (ortholog) 8 111748186 111777269 + 30032202 116907946 MODEL JAAIVD010000027;XM_032911167 XP_032767058 protein-coding 625940886 LOC116897586 small nucleolar RNA SNORA17 3 53900920 53901035 - 116897586 MODEL JAAIVD010000012 pseudo 625940887 LOC116900191 60S ribosomal protein L15-like 5 48187527 48188187 - 116900191 MODEL JAAIVD010000023 pseudo 625940888 LOC116900557 olfactory receptor 4K14-like 5 89994994 89995935 + 22301074 116900557 MODEL JAAIVD010000023;XM_032902283 XP_032758174 protein-coding 625940892 Nat10 N-acetyltransferase 10 ENCODES a protein that exhibits DNA polymerase binding (ortholog); mRNA cytidine N-acetyltransferase activity (ortholog); N-acetyltransferase activity (ortholog); INVOLVED IN negative regulation of telomere maintenance via telomerase (ortholog); positive regulation of translation (ortholog); protein acetylation (ortholog); FOUND IN midbody (ortholog); nucleolus (ortholog); small-subunit processome (ortholog) 5 81552882 81588494 - 22301074;30032202 116901688 MODEL JAAIVD010000023;XM_032903814 XP_032759705 RNA cytidine acetyltransferase protein-coding 625940924 LOC116903043 TD and POZ domain-containing protein 3-like 6 159561003 159561773 + 30032202 116903043 MODEL JAAIVD010000024;XM_032905345 XP_032761236 protein-coding 625940927 Prmt9 protein arginine methyltransferase 9 ENCODES a protein that exhibits protein-arginine N-methyltransferase activity (ortholog); protein-arginine omega-N symmetric methyltransferase activity (ortholog); INVOLVED IN mRNA processing (ortholog); ASSOCIATED WITH Cocaine-Related Disorders (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytoplasm (ortholog) 17 24761004 24780689 + 22301074;30032202 116886428 MODEL JAAIVD010000011;XM_032887914 XP_032743805 protein arginine N-methyltransferase 9 protein-coding 625940939 Gcnt1 glucosaminyl (N-acetyl) transferase 1 ENCODES a protein that exhibits beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN cell adhesion molecule production (ortholog); glycoprotein biosynthetic process (ortholog); kidney morphogenesis (ortholog); ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); Experimental Liver Cirrhosis (ortholog); Prostatic Neoplasms (ortholog); FOUND IN extracellular region (ortholog); Golgi cisterna (ortholog); nuclear speck (ortholog) 2 17410096 17415097 - 22301074;30032202 116891009 MODEL JAAIVD010000001;XM_032891690 XP_032747581 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase protein-coding 625940944 LOC116912813 60S ribosomal protein L14-like 11 22709955 22710586 + 116912813 MODEL JAAIVD010000006 pseudo 625940945 Cntrl centriolin INVOLVED IN aorta development (ortholog); cardiac septum development (ortholog); coronary vasculature development (ortholog); ASSOCIATED WITH nephronophthisis (ortholog); FOUND IN centriolar subdistal appendage (ortholog); centrosome (ortholog); meiotic spindle (ortholog) 5 466561 540039 - 22301074 116901103 MODEL JAAIVD010000023;XM_032902666 XP_032758557 protein-coding 625940992 Lrrc41 leucine rich repeat containing 41 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 1 39755387 39776261 + 30032202 116898221 MODEL JAAIVD010000025;XM_032899580 XP_032755471 leucine-rich repeat-containing protein 41 protein-coding 625941006 LOC116904740 small nucleolar RNA SNORA17 6 124982548 124982677 + 116904740 MODEL JAAIVD010000024;XR_004388427 snorna 625941009 Agmo alkylglycerol monooxygenase ENCODES a protein that exhibits glyceryl-ether monooxygenase activity (ortholog); iron ion binding (ortholog); INVOLVED IN ether lipid metabolic process (ortholog); lipid metabolic process (ortholog); triglyceride biosynthetic process (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 7 50636544 50682316 + 22301074;30032202 116906062 MODEL JAAIVD010000026;XM_032909100 XP_032764991 protein-coding 625941019 LOC116895100 small nucleolar RNA SNORD97 2 90378651 90378838 + 116895100 MODEL JAAIVD010000001;XR_004387261 snorna 625941022 LOC116909076 60S ribosomal protein L17-like 9 86502014 86511595 + 116909076 MODEL JAAIVD010000002 pseudo 625941023 Klk12 kallikrein related peptidase 12 ENCODES a protein that exhibits peptidase activity (ortholog); serine-type peptidase activity (ortholog); INVOLVED IN proteolysis (ortholog) 2 155619310 155623666 - 22301074 116894358 MODEL JAAIVD010000001;XM_032896060 XP_032751951 kallikrein-12 protein-coding 625941031 Ntrk2 neurotrophic receptor tyrosine kinase 2 ENCODES a protein that exhibits brain-derived neurotrophic factor binding (ortholog); brain-derived neurotrophic factor receptor activity (ortholog); neurotrophin binding (ortholog); INVOLVED IN brain-derived neurotrophic factor receptor signaling pathway (ortholog); cellular response to amino acid stimulus (ortholog); cellular response to brain-derived neurotrophic factor stimulus (ortholog); PARTICIPATES IN brain-derived neurotrophic factor signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); alcohol withdrawal syndrome (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cell surface (ortholog) 14 79014321 79328636 - 22301074;30032202 116884038 MODEL JAAIVD010000009;XM_032885278;XM_032885279;XM_032885280;XM_032885281;XM_032885282 XP_032741169;XP_032741170;XP_032741171;XP_032741172;XP_032741173 BDNF/NT-3 growth factors receptor protein-coding 625941068 LOC116888609 ubiquitin-conjugating enzyme E2 D4-like X 52585964 52586469 - 30032202 116888609 MODEL JAAIVD010000014;XM_032889908 XP_032745799 protein-coding 625941072 LOC116890438 U7 small nuclear RNA 1 103696796 103696856 - 116890438 MODEL JAAIVD010000025;XR_004386634 snrna 625941075 Ankrd52 ankyrin repeat domain 52 1 155847564 155865962 + 22301074 116906046 MODEL JAAIVD010000025;XM_032909096 XP_032764987 serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C protein-coding 625941107 Mmut methylmalonyl-CoA mutase ENCODES a protein that exhibits cobalamin binding (ortholog); GTPase activity (ortholog); identical protein binding (ortholog); INVOLVED IN homocysteine metabolic process (ortholog); positive regulation of GTPase activity (ortholog); post-embryonic development (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH brain disease (ortholog); inherited metabolic disorder (ortholog); methylmalonic acidemia (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 4 94919182 94944594 - 22301074;30032202 116899238 MODEL JAAIVD010000003;XM_032900843 XP_032756734 methylmalonyl-CoA mutase, mitochondrial protein-coding 625941123 LOC116899230 sulfotransferase 1C2-like 4 91007148 91024431 - 116899230 MODEL JAAIVD010000003;XR_004387699 pseudo 625941132 LOC116911049 uncharacterized LOC116911049 10 49363437 49364678 + 116911049 MODEL JAAIVD010000005;XR_004389308 ncrna 625941136 Rragb Ras related GTP binding B ENCODES a protein that exhibits GTP binding (ortholog); GTPase binding (ortholog); guanyl ribonucleotide binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to amino acid stimulus (ortholog); cellular response to leucine starvation (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); lysosome (ortholog) X 18380032 18412414 + 22301074;30032202 116888351 MODEL JAAIVD010000014;XM_032889620 XP_032745511 ras-related GTP-binding protein B protein-coding 625941151 Fer1l6 fer-1 like family member 6 ENCODES a protein that exhibits calcium-dependent phospholipid binding (ortholog); INVOLVED IN response to bacterium (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog); recycling endosome (ortholog) 1 233051010 233198188 + 22301074;30032202 116911789 MODEL JAAIVD010000025;XM_032915788 XP_032771679 fer-1-like protein 6 protein-coding 625941197 LOC116890552 small nucleolar RNA SNORA17 1 151084658 151084788 - 116890552 MODEL JAAIVD010000025;XR_004386727 snorna 625941200 LOC116883897 histone H2A type 1-H-like 14 41970998 41971380 + 22301074;30032202 116883897 MODEL JAAIVD010000009;XM_032885165 XP_032741056 protein-coding 625941205 LOC116885789 olfactory receptor 13C7-like 1 2679766 2680722 + 22301074 116885789 MODEL JAAIVD010000025;XM_032887125 XP_032743016 protein-coding 625941208 Trnaq-cug transfer RNA glutamine (anticodon CUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60936089 60936160 + 116897670 MODEL JAAIVD010000012 trna 625941209 Slc16a4 solute carrier family 16 member 4 3 50938797 50959694 - 22301074;30032202 116896392 MODEL JAAIVD010000012;XM_032897522;XM_032897523 XP_032753413;XP_032753414 monocarboxylate transporter 5 protein-coding 625941222 LOC116902730 high mobility group protein B2-like 6 56688713 56689378 - 116902730 MODEL JAAIVD010000024 pseudo 625941223 LOC116902714 heterogeneous nuclear ribonucleoprotein A3-like 6 51809533 51810506 + 116902714 MODEL JAAIVD010000024 pseudo 625941224 Dnajc4 DnaJ heat shock protein family (Hsp40) member C4 2 804199 808099 + 116894810 MODEL JAAIVD010000001;XM_032896476 XP_032752367 dnaJ homolog subfamily C member 4 protein-coding 625941234 LOC116892284 signal peptidase complex subunit 2-like 1 61095536 61096323 - 116892284 MODEL JAAIVD010000025 pseudo 625941235 Bckdhb branched chain keto acid dehydrogenase E1 subunit beta ENCODES a protein that exhibits branched-chain 2-oxo acid dehydrogenase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN branched-chain alpha-keto acid decarboxylation to branched-chain acyl-CoA (ortholog); branched-chain amino acid catabolic process (ortholog); response to cAMP (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); genetic disease (ortholog); maple syrup urine disease (ortholog); FOUND IN branched-chain alpha-ketoacid dehydrogenase complex (ortholog); mitochondrion (ortholog) 8 78054033 78242113 + 22301074;30032202 116906672 MODEL JAAIVD010000027;XM_032909458;XM_032909459 XP_032765349;XP_032765350 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial protein-coding 625941252 LOC116895774 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-like 3 49158502 49162875 + 116895774 MODEL JAAIVD010000012 pseudo 625941253 LOC116890451 small nucleolar RNA SNORA16B/SNORA16A family 1 94226915 94227033 + 116890451 MODEL JAAIVD010000025;XR_004386643 snorna 625941256 Epn3 epsin 3 ENCODES a protein that exhibits EH domain binding (ortholog); ASSOCIATED WITH diastolic heart failure (ortholog); recessive dystrophic epidermolysis bullosa (ortholog); FOUND IN clathrin-coated pit (ortholog); clathrin-coated vesicle (ortholog); cytoplasmic side of plasma membrane (ortholog) 9 51040782 51050875 + 30032202 116909662 MODEL JAAIVD010000002;XM_032913315 XP_032769206 epsin-3 protein-coding 625941270 P4ha1 prolyl 4-hydroxylase subunit alpha 1 ENCODES a protein that exhibits identical protein binding (ortholog); procollagen-proline 4-dioxygenase activity (ortholog); INVOLVED IN collagen fibril organization (ortholog); peptidyl-proline hydroxylation to 4-hydroxy-L-proline (ortholog); FOUND IN endoplasmic reticulum (ortholog); procollagen-proline 4-dioxygenase complex (ortholog) 18 24068198 25228650 + 22301074;30032202 116886893 MODEL JAAIVD010000013;XM_032888353;XM_032888354;XM_032888355 XP_032744244;XP_032744245;XP_032744246 prolyl 4-hydroxylase subunit alpha-1 protein-coding 625941297 Pde1b phosphodiesterase 1B ENCODES a protein that exhibits 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); 3',5'-cyclic-GMP phosphodiesterase activity (ortholog); calmodulin-activated dual specificity 3',5'-cyclic-GMP, 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); INVOLVED IN cellular response to granulocyte macrophage colony-stimulating factor stimulus (ortholog); cellular response to macrophage colony-stimulating factor stimulus (ortholog); locomotory behavior (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH cerebellar ataxia (ortholog); learning disability (ortholog); Parkinsonism (ortholog); FOUND IN cytosol (ortholog); neuronal cell body (ortholog) 1 259558381 259585489 - 22301074 116883161 MODEL JAAIVD010000025;XM_032884191 XP_032740082 calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B protein-coding 625941317 Nfatc1 nuclear factor of activated T cells 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN aortic valve development (ortholog); aortic valve morphogenesis (ortholog); B-1a B cell differentiation (ortholog); ASSOCIATED WITH aortic valve stenosis (ortholog); congenital heart disease (ortholog); Diabetic Nephropathies (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nuclear body (ortholog) 15 51523023 51628605 + 30032202 116884694 MODEL JAAIVD010000010;XM_032885878 XP_032741769 nuclear factor of activated T-cells, cytoplasmic 1 protein-coding 625941331 LOC116913121 60S ribosomal protein L21-like 12 14099287 14099769 - 116913121 MODEL JAAIVD010000007 pseudo 625941332 Rhot1 ras homolog family member T1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); calcium ion binding (ortholog); GDP binding (ortholog); INVOLVED IN cellular homeostasis (ortholog); establishment of mitochondrion localization by microtubule attachment (ortholog); mitochondrial outer membrane permeabilization (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH motor neuron disease (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 9 90150402 90218031 - 22301074;30032202 116908521 MODEL JAAIVD010000002;XM_032911695;XM_032911696;XM_032911697;XM_032911698 XP_032767586;XP_032767587;XP_032767588;XP_032767589 mitochondrial Rho GTPase 1 protein-coding 625941360 LOC116886907 trafficking protein particle complex subunit 3-like protein 18 24274282 24306669 - 30032202 116886907 MODEL JAAIVD010000013;XM_032888372 XP_032744263 protein-coding 625941369 LOC116906163 26S proteasome complex subunit SEM1-like 7 101023474 101024393 - 22301074;30032202 116906163 MODEL JAAIVD010000026;XM_032909142 XP_032765033 protein-coding 625941373 Cenpx centromere protein X ENCODES a protein that exhibits DNA binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN interstrand cross-link repair (ortholog); replication fork processing (ortholog); resolution of meiotic recombination intermediates (ortholog); FOUND IN chromatin (ortholog); FANCM-MHF complex (ortholog); Fanconi anaemia nuclear complex (ortholog) 9 63305537 63308417 + 22301074;30032202 116909852 MODEL JAAIVD010000002;XM_032913578;XM_032913579 XP_032769469;XP_032769470 protein-coding 625941386 LOC116911693 40S ribosomal protein S2-like 10 1177466 1178315 - 116911693 MODEL JAAIVD010000005 pseudo 625941387 LOC116889554 U2 spliceosomal RNA X 126505542 126505614 + 116889554 MODEL JAAIVD010000014 pseudo 625941388 LOC116911845 small nucleolar RNA SNORA17 10 84312654 84312756 + 116911845 MODEL JAAIVD010000005 pseudo 625941389 LOC116909269 cytochrome c oxidase subunit 6B1-like 9 13292580 13292927 - 22301074;30032202 116909269 MODEL JAAIVD010000002;XM_032912797 XP_032768688 protein-coding 625941392 Il31ra interleukin 31 receptor A ENCODES a protein that exhibits cytokine binding (ortholog); cytokine receptor activity (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); cytokine-mediated signaling pathway (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); primary cutaneous amyloidosis (ortholog); primary localized cutaneous amyloidosis 2 (ortholog); FOUND IN external side of plasma membrane (ortholog) 3 184477777 184532996 + 30032202 116895654 MODEL JAAIVD010000012;XM_032896861 XP_032752752 interleukin-31 receptor subunit alpha protein-coding 625941411 Mtmr2 myotubularin related protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol phosphate phosphatase activity (ortholog); phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity (ortholog); INVOLVED IN dendritic spine maintenance (ortholog); dephosphorylation (ortholog); myelin assembly (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease type 4 (ortholog); Charcot-Marie-Tooth disease type 4B1 (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 9610652 9659258 + 22301074;30032202 116906785 MODEL JAAIVD010000027;XM_032909640;XM_032909641 XP_032765531;XP_032765532 myotubularin-related protein 2 protein-coding 625941433 Luzp4 leucine zipper protein 4 X 101050921 101074448 + 116888811 MODEL JAAIVD010000014;XM_032890090 XP_032745981 protein-coding 625941444 LOC116891849 olfactory receptor 5B2-like 2 13232839 13233781 + 116891849 MODEL JAAIVD010000001 pseudo 625941445 LOC116889459 U7 small nuclear RNA X 12446489 12446552 + 116889459 MODEL JAAIVD010000014;XR_004386415 snrna 625941448 LOC116883398 uncharacterized LOC116883398 14 47471542 47486326 - 116883398 MODEL JAAIVD010000009;XR_004385757 ncrna 625941453 LOC116887388 glutathione S-transferase theta-4 18 11622768 11630099 + 30032202 116887388 MODEL JAAIVD010000013;XM_032888981 XP_032744872 protein-coding 625941462 Snrnp35 small nuclear ribonucleoprotein U11/U12 subunit 35 FOUND IN nucleolus (ortholog); nucleus (ortholog); U12-type spliceosomal complex (ortholog) 16 29381396 29389109 - 30032202 116885635 MODEL JAAIVD010000004;XM_032886941;XM_032886942 XP_032742832;XP_032742833 U11/U12 small nuclear ribonucleoprotein 35 kDa protein protein-coding 625941471 Plekhb1 pleckstrin homology domain containing B1 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN regulation of cell differentiation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN membrane (ortholog) 2 98949506 98963446 - 30032202 116891745 MODEL JAAIVD010000001;XM_032893053;XM_032893054 XP_032748944;XP_032748945 pleckstrin homology domain-containing family B member 1 protein-coding 625941486 Sfr1 SWI5 dependent homologous recombination repair protein 1 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN cellular response to estrogen stimulus (ortholog); double-strand break repair via homologous recombination (ortholog); positive regulation of DNA-templated transcription (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 47258918 47262833 + 30032202 116891271 MODEL JAAIVD010000001;XM_032892168;XM_032892169 XP_032748059;XP_032748060 swi5-dependent recombination DNA repair protein 1 homolog protein-coding 625941497 Haus7 HAUS augmin like complex subunit 7 ENCODES a protein that exhibits thioesterase binding (ortholog); INVOLVED IN centrosome cycle (ortholog); spindle assembly (ortholog); FOUND IN centrosome (ortholog); HAUS complex (ortholog); mitotic spindle microtubule (ortholog) X 129059611 129079900 - 30032202 116888796 MODEL JAAIVD010000014;XM_032890077 XP_032745968 HAUS augmin-like complex subunit 7 protein-coding 625941511 Srp68 signal recognition particle 68 ENCODES a protein that exhibits 7S RNA binding (ortholog); protein domain specific binding (ortholog); ribosome binding (ortholog); INVOLVED IN response to xenobiotic stimulus (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); Craniofacial Abnormalities (ortholog); Severe Congenital Neutropenia 10 (ortholog); FOUND IN cytosol (ortholog); signal recognition particle (ortholog); signal recognition particle, endoplasmic reticulum targeting (ortholog) 9 67795735 67821971 + 22301074;30032202 116909033 MODEL JAAIVD010000002;XM_032912513 XP_032768404 signal recognition particle subunit SRP68 protein-coding 625941531 Elk1 ETS transcription factor ELK1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cellular response to gamma radiation (ortholog); cellular response to lipid (ortholog); cellular response to testosterone stimulus (ortholog); PARTICIPATES IN adenosine signaling pathway; hypoxia inducible factor pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); anxiety disorder (ortholog); Brain Injuries (ortholog); FOUND IN axon terminus (ortholog); dendrite (ortholog); mitochondrial membrane (ortholog) X 2838791 2854778 - 22301074;30032202 116889397 MODEL JAAIVD010000014;XM_032890501;XM_032890502 XP_032746392;XP_032746393 ETS domain-containing protein Elk-1 protein-coding 625941543 Atf2 activating transcription factor 2 ENCODES a protein that exhibits cAMP response element binding (ortholog); cAMP response element binding protein binding (ortholog); chromatin binding (ortholog); INVOLVED IN abducens nucleus development (ortholog); adipose tissue development (ortholog); amelogenesis (ortholog); PARTICIPATES IN adenosine signaling pathway; interleukin-12 signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); basal cell carcinoma (ortholog); disease of cellular proliferation (ortholog); FOUND IN CCAAT-binding factor complex (ortholog); chromatin (ortholog); cytoplasm (ortholog) 5 51170000 51246336 - 30032202 116901524 MODEL JAAIVD010000023;XM_032903502;XM_032903503 XP_032759393;XP_032759394 cyclic AMP-dependent transcription factor ATF-2 protein-coding 625941562 LOC116904068 developmental pluripotency-associated protein 2-like 6 134754761 134755556 + 116904068 MODEL JAAIVD010000024 pseudo 625941563 LOC116898234 heterogeneous nuclear ribonucleoprotein A3-like 4 148623357 148624436 + 116898234 MODEL JAAIVD010000003 pseudo 625941564 Klhl33 kelch like family member 33 12 72419241 72425739 + 22301074 116913888 MODEL JAAIVD010000007;XM_032918175 XP_032774066 kelch-like protein 33 protein-coding 625941570 Trnan-guu transfer RNA asparagine (anticodon GUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 10 50211606 50211679 - 116911915 MODEL JAAIVD010000005 trna 625941571 LOC116892731 olfactory receptor 5-like 2 179595130 179596068 + 22301074 116892731 MODEL JAAIVD010000001;XM_032894605 XP_032750496 protein-coding 625941574 Neurod1 neuronal differentiation 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN amacrine cell differentiation (ortholog); anterior/posterior pattern specification (ortholog); camera-type eye development (ortholog); ASSOCIATED WITH diabetes mellitus (ortholog); Experimental Diabetes Mellitus (ortholog); fundus dystrophy (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) 5 56676479 56680550 - 22301074 116901562 MODEL JAAIVD010000023;XM_032903556 XP_032759447 neurogenic differentiation factor 1 protein-coding 625941580 LOC116888829 aldose reductase-related protein 2-like 1 104687694 104688600 - 116888829 MODEL JAAIVD010000025 pseudo 625941581 LOC116914715 beta-defensin 4-like 13 64921779 64923931 - 22301074;30032202 116914715 MODEL JAAIVD010000008;XM_032919146 XP_032775037 protein-coding 625941585 Tceal1 transcription elongation factor A like 1 ASSOCIATED WITH genetic disease (ortholog); NEURODEVELOPMENTAL DISORDER WITH GAIT DISTURBANCE, DYSMORPHIC FACIES, AND BEHAVIORAL ABNORMALITIES, X-LINKED (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) X 88465727 88467657 + 116889133 MODEL JAAIVD010000014;XM_032890304;XM_032890305;XM_032890306 XP_032746195;XP_032746196;XP_032746197 transcription elongation factor A protein-like 1 protein-coding 625941597 Spc25 SPC25 component of NDC80 kinetochore complex INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); chromosome segregation (ortholog); mitotic spindle organization (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); kinetochore (ortholog); Ndc80 complex (ortholog) 5 46515253 46528559 - 22301074;30032202 116901479 MODEL JAAIVD010000023;XM_032903427;XM_032903428;XM_032903429 XP_032759318;XP_032759319;XP_032759320 kinetochore protein Spc25 protein-coding 625941614 LOC116913478 uncharacterized LOC116913478 12 66768857 66771477 + 116913478 MODEL JAAIVD010000007;XR_004389622 ncrna 625941618 Wdr5 WD repeat domain 5 ENCODES a protein that exhibits histone H3K4 methyltransferase activity (ortholog); histone H3K4me1 reader activity (ortholog); histone H3Q5ser reader activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); neuron projection development (ortholog); peptidyl-lysine methylation (ortholog); PARTICIPATES IN histone modification pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH congenital heart disease (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN ATAC complex (ortholog); histone acetyltransferase complex (ortholog); histone methyltransferase complex (ortholog) 5 9130397 9145872 - 30032202 116901237 MODEL JAAIVD010000023;XM_032902982 XP_032758873 WD repeat-containing protein 5 protein-coding 625941635 LOC116897270 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7-like 3 199539750 199541353 - 116897270 MODEL JAAIVD010000012 pseudo 625941636 Htr4 5-hydroxytryptamine receptor 4 ENCODES a protein that exhibits G protein-coupled serotonin receptor activity (ortholog); serotonin receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-activating serotonin receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN serotonin signaling pathway via receptors engaging G alphas protein family; ASSOCIATED WITH Anorexia (ortholog); anorexia nervosa (ortholog); asthma (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); membrane (ortholog) 15 69509468 69647514 - 22301074;30032202 116884429 MODEL JAAIVD010000010;XM_032885516;XM_032885517 XP_032741407;XP_032741408 protein-coding 625941650 LOC116909357 somatotropin 9 72823133 72824654 + 22301074;30032202 116909357 MODEL JAAIVD010000002;XM_032912904;XM_032912905 XP_032768795;XP_032768796 protein-coding 625941666 LOC116886587 core histone macro-H2A.2-like 17 2729808 2736202 + 116886587 MODEL JAAIVD010000011 pseudo 625941667 Stpg3 sperm-tail PG-rich repeat containing 3 ASSOCIATED WITH epilepsy (ortholog) 5 11966716 11969420 + 116901319 MODEL JAAIVD010000023;XM_032903132 XP_032759023 protein STPG3 protein-coding 625941677 LOC116886767 5S ribosomal RNA 17 40232759 40232877 + 116886767 MODEL JAAIVD010000011;XR_004386168 rrna 625941680 LOC116895240 DTW domain-containing protein 2-like 3 24499573 24524754 - 116895240 MODEL JAAIVD010000012 pseudo 625941681 LOC116902845 60S ribosomal protein L36a-like 6 93426211 93426531 - 22301074;30032202 116902845 MODEL JAAIVD010000024;XM_032905175 XP_032761066 protein-coding 625941684 Abi3bp ABI family member 3 binding protein ENCODES a protein that exhibits actin filament binding (ortholog); collagen binding (ortholog); glycosaminoglycan binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); extracellular matrix organization (ortholog); positive regulation of cell-substrate adhesion (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); endometriosis (ortholog); FOUND IN dendritic shaft (ortholog); dendritic spine (ortholog); extracellular matrix (ortholog) 4 40590394 40787817 + 22301074;30032202 116898904 MODEL JAAIVD010000003;XM_032900306 XP_032756197 target of Nesh-SH3 protein-coding 625941727 Ccdc154 coiled-coil domain containing 154 INVOLVED IN bone mineralization involved in bone maturation (ortholog); bone remodeling (ortholog); bone resorption (ortholog); ASSOCIATED WITH autosomal recessive osteopetrosis 1 (ortholog) 9 2427025 2436337 + 30032202 116909136 MODEL JAAIVD010000002;XM_032912623 XP_032768514 coiled-coil domain-containing protein 154 protein-coding 625941746 Elavl4 ELAV like RNA binding protein 4 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); mRNA 3'-UTR binding (ortholog); mRNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); associative learning (ortholog); cellular response to nerve growth factor stimulus (ortholog); ASSOCIATED WITH High Myopia (ortholog); hypothyroidism (ortholog); learning disability (ortholog); FOUND IN apical dendrite (ortholog); axon (ortholog); cytoplasm (ortholog) 1 42902191 42989048 - 22301074 116898874 MODEL JAAIVD010000025;XM_032900247;XM_032900255;XM_032900263;XM_032900272;XM_032900283 XP_032756138;XP_032756146;XP_032756154;XP_032756163;XP_032756174 ELAV-like protein 4 protein-coding 625941770 Tex12 testis expressed 12 INVOLVED IN meiotic DNA repair synthesis (ortholog); synaptonemal complex assembly (ortholog); FOUND IN central element (ortholog); centrosome (ortholog); chromosome (ortholog) 8 45029950 45039008 - 30032202 116906728 MODEL JAAIVD010000027;XM_032909539;XM_032909540;XM_032909541;XM_032909542 XP_032765430;XP_032765431;XP_032765432;XP_032765433 testis-expressed protein 12 protein-coding 625941788 LOC116903187 killer cell lectin-like receptor 5 6 17347448 17366959 - 116903187 MODEL JAAIVD010000024;XM_032905561;XM_032905562 XP_032761452;XP_032761453 protein-coding 625941798 Ston1 stonin 1 ENCODES a protein that exhibits cargo adaptor activity (ortholog); INVOLVED IN endocytosis (ortholog); focal adhesion assembly (ortholog); focal adhesion disassembly (ortholog); FOUND IN cell leading edge (ortholog); clathrin-coated pit (ortholog) 7 4156514 4240681 - 22301074;30032202 116905735 MODEL JAAIVD010000026;XM_032908700;XM_032908701;XM_032908702 XP_032764591;XP_032764592;XP_032764593 stonin-1 protein-coding 625941819 Ddx41 DEAD-box helicase 41 ENCODES a protein that exhibits DNA binding (ortholog); RNA helicase activity (ortholog); INVOLVED IN cell differentiation (ortholog); cell population proliferation (ortholog); cellular response to interferon-beta (ortholog); ASSOCIATED WITH Acute Erythroleukemia (ortholog); acute myeloid leukemia (ortholog); aplastic anemia (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 14 73845874 73851331 - 22301074;30032202 116883748 MODEL JAAIVD010000009;XM_032884992 XP_032740883 probable ATP-dependent RNA helicase DDX41 protein-coding 625941840 LOC116896203 heat shock cognate 71 kDa protein-like 3 20222393 20224445 + 116896203 MODEL JAAIVD010000012 pseudo 625941841 LOC116897352 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like 3 220246750 220247990 + 116897352 MODEL JAAIVD010000012 pseudo 625941842 LOC116902566 U1 spliceosomal RNA 5 10384774 10384940 + 116902566 MODEL JAAIVD010000023;XR_004388162 snrna 625941845 Stard5 StAR related lipid transfer domain containing 5 ENCODES a protein that exhibits bile acid binding (ortholog); cholesterol binding (ortholog); cholesterol transfer activity (ortholog); INVOLVED IN cholesterol import (ortholog) 2 116687201 116697516 - 22301074;30032202 116891885 MODEL JAAIVD010000001;XM_032893296 XP_032749187 stAR-related lipid transfer protein 5 protein-coding 625941855 Bbs1 Bardet-Biedl syndrome 1 ENCODES a protein that exhibits patched binding (ortholog); phosphoprotein binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN adult behavior (ortholog); brain morphogenesis (ortholog); cartilage development (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl Syndrome 1/7, Digenic (ortholog); FOUND IN BBSome (ortholog); centriolar satellite (ortholog); centrosome (ortholog) 2 2753804 2769572 + 30032202 116890753 MODEL JAAIVD010000001;XM_032891209;XM_032891210 XP_032747100;XP_032747101 Bardet-Biedl syndrome 1 protein protein-coding 625941877 Snrpd3 small nuclear ribonucleoprotein D3 polypeptide ENCODES a protein that exhibits enzyme binding (ortholog); histone pre-mRNA DCP binding (ortholog); RNA binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); protein methylation (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 18 11914155 11929555 - 22301074;30032202 116887009 MODEL JAAIVD010000013;XM_032888493;XM_032888494 XP_032744384;XP_032744385 small nuclear ribonucleoprotein Sm D3 protein-coding 625941890 Clpx caseinolytic mitochondrial matrix peptidase chaperone subunit X ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); ATP-dependent peptidase activity (ortholog); INVOLVED IN ATP metabolic process (ortholog); protein catabolic process (ortholog); proteolysis (ortholog); ASSOCIATED WITH Erythropoietic Protoporphyria 2 (ortholog); FOUND IN endopeptidase Clp complex (ortholog); mitochondrial endopeptidase Clp complex (ortholog); mitochondrial matrix (ortholog) 8 59591384 59630414 + 22301074;30032202 116906652 MODEL JAAIVD010000027;XM_032909436;XM_032909437 XP_032765327;XP_032765328 ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial protein-coding 625941909 Eif4g2 eukaryotic translation initiation factor 4 gamma 2 ENCODES a protein that exhibits translation factor activity, RNA binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN heart development (ortholog); negative regulation of autophagy (ortholog); positive regulation of axon extension (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH hypertension (ortholog); liver benign neoplasm (ortholog); renovascular hypertension (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 90372798 90384185 + 22301074;30032202 116893142 MODEL JAAIVD010000001;XM_032895068 XP_032750959 protein-coding 625941934 LOC116909197 olfactory receptor 1496-like 9 92673013 92673948 - 22301074;30032202 116909197 MODEL JAAIVD010000002;XM_032912697 XP_032768588 protein-coding 625941937 Trnak-uuu transfer RNA lysine (anticodon UUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 12100070 12100142 + 116895149 MODEL JAAIVD010000001 trna 625941938 LOC116895898 60S ribosomal protein L7-like 3 117274481 117275284 + 116895898 MODEL JAAIVD010000012 pseudo 625941939 LOC116890123 olfactory receptor 8K3-like 1 241985489 241986430 - 22301074;30032202 116890123 MODEL JAAIVD010000025;XM_032890862 XP_032746753 protein-coding 625941942 LOC116907236 uncharacterized LOC116907236 8 10929114 10954575 + 116907236 MODEL JAAIVD010000027 pseudo 625941943 LOC116910763 U6 spliceosomal RNA 9 60938357 60938463 - 116910763 MODEL JAAIVD010000002;XR_004389272 snrna 625941946 C6H3orf20 chromosome 6 C3orf20 homolog FOUND IN cytoplasm (ortholog) 6 54991151 55030924 - 116903494 MODEL JAAIVD010000024;XM_032906082;XM_032906083 XP_032761973;XP_032761974 uncharacterized protein C3orf20 homolog protein-coding 625941968 Manf mesencephalic astrocyte derived neurotrophic factor ENCODES a protein that exhibits growth factor activity (ortholog); sulfatide binding (ortholog); INVOLVED IN ATF6-mediated unfolded protein response (ortholog); regulation of response to endoplasmic reticulum stress (ortholog); vasoconstriction of artery involved in ischemic response to lowering of systemic arterial blood pressure (ortholog); ASSOCIATED WITH breast cancer (ortholog); Diabetes, Deafness, Developmental Delay, and Short Stature Syndrome (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog); extracellular region (ortholog) 8 98204432 98207654 - 30032202 116907506 MODEL JAAIVD010000027;XM_032910505 XP_032766396 mesencephalic astrocyte-derived neurotrophic factor protein-coding 625941976 LOC116910241 phosphoglycerate mutase 1-like 9 46409756 46410570 + 116910241 MODEL JAAIVD010000002 pseudo 625941977 Dazap2 DAZ associated protein 2 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); INVOLVED IN protein destabilization (ortholog); stress granule assembly (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nuclear body (ortholog) 1 262491590 262497114 - 116883952 MODEL JAAIVD010000025;XM_032885200;XM_032885203;XM_032885206 XP_032741091;XP_032741094;XP_032741097 DAZ-associated protein 2 protein-coding 625941993 Urb2 URB2 ribosome biogenesis homolog ASSOCIATED WITH epilepsy (ortholog); prostate cancer (ortholog); FOUND IN midbody (ortholog); nucleolus (ortholog) 17 43565911 43591412 + 30032202 116886091 MODEL JAAIVD010000011;XM_032887413;XM_032887414;XM_032887415 XP_032743304;XP_032743305;XP_032743306 unhealthy ribosome biogenesis protein 2 homolog protein-coding 625942013 LOC116900524 60S ribosomal protein L10a-like 5 84429581 84430241 + 116900524 MODEL JAAIVD010000023;XR_004387936 pseudo 625942016 LOC116899320 NADH-cytochrome b5 reductase-like 1 47728729 47746810 - 22301074;30032202 116899320 MODEL JAAIVD010000025;XM_032900991;XM_032901002 XP_032756882;XP_032756893 protein-coding 625942032 LOC116905454 E3 ubiquitin-protein ligase CCNB1IP1-like 1 149537338 149538177 + 116905454 MODEL JAAIVD010000025 pseudo 625942033 Hamp hepcidin antimicrobial peptide ENCODES a protein that exhibits copper ion binding (ortholog); hormone activity (ortholog); iron ion transmembrane transporter inhibitor activity (ortholog); INVOLVED IN acute-phase response (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); PARTICIPATES IN iron efflux pathway; ASSOCIATED WITH alcohol-associated liver disease (ortholog); anemia (ortholog); atransferrinemia (ortholog); FOUND IN apical cortex (ortholog); extracellular region (ortholog); intercalated disc (ortholog) 2 165095405 165097287 + 22301074;30032202 116892297 MODEL JAAIVD010000001;XM_032893906;XM_032893908 XP_032749797;XP_032749799 hepcidin protein-coding 625942044 LOC116885103 U1 spliceosomal RNA 15 53528521 53528669 - 116885103 MODEL JAAIVD010000010 pseudo 625942045 LOC116904596 stabilizer of axonemal microtubules 1-like 1 144239655 144241605 - 22301074;30032202 116904596 MODEL JAAIVD010000025;XM_032907423 XP_032763314 protein-coding 625942050 Ttc9 tetratricopeptide repeat domain 9 INVOLVED IN bone development (ortholog); ASSOCIATED WITH opiate dependence (ortholog) 7 95823263 95858507 + 22301074 116905240 MODEL JAAIVD010000026;XM_032908065 XP_032763956 tetratricopeptide repeat protein 9A protein-coding 625942057 LOC116889943 olfactory receptor 6C76-like 1 161338428 161339393 - 116889943 MODEL JAAIVD010000025 pseudo 625942058 Mepce methylphosphate capping enzyme ENCODES a protein that exhibits 7SK snRNA binding (ortholog); RNA 5'-gamma-phosphate methyltransferase activity (ortholog); RNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of G1/S transition of mitotic cell cycle (ortholog); positive regulation of protein localization to Cajal body (ortholog); FOUND IN 7SK snRNP (ortholog); nucleus (ortholog); ribonucleoprotein complex (ortholog) 16 16236753 16241479 + 30032202 116885433 MODEL JAAIVD010000004;XM_032886718 XP_032742609 7SK snRNA methylphosphate capping enzyme protein-coding 625942066 Zbtb8os zinc finger and BTB domain containing 8 opposite strand ENCODES a protein that exhibits protein guanylyltransferase activity (ortholog); RNA ligase (GTP) activity (ortholog); INVOLVED IN IRE1-mediated unfolded protein response (ortholog); mRNA splicing, via endonucleolytic cleavage and ligation (ortholog); RNA splicing, via endonucleolytic cleavage and ligation (ortholog); ASSOCIATED WITH pre-malignant neoplasm (ortholog); FOUND IN catalytic complex (ortholog); cytoplasm (ortholog); nucleus (ortholog) 1 28802385 28813466 - 30032202 116896164 MODEL JAAIVD010000025;XM_032897196 XP_032753087 protein archease protein-coding 625942077 LOC116900124 olfactory receptor 50-like 5 14378306 14379247 + 22301074;30032202 116900124 MODEL JAAIVD010000023;XM_032901898 XP_032757789 protein-coding 625942081 Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 ENCODES a protein that exhibits CDP phosphatase activity (ortholog); CTPase activity (ortholog); GDP phosphatase activity (ortholog); INVOLVED IN CTP metabolic process (ortholog); GDP catabolic process (ortholog); nucleobase-containing small molecule catabolic process (ortholog); FOUND IN autophagosome membrane (ortholog); Golgi membrane (ortholog) 12 54746463 54773504 - 30032202 116913143 MODEL JAAIVD010000007;XM_032917346;XM_032917347;XM_032917348 XP_032773237;XP_032773238;XP_032773239 protein-coding 625942103 Ralgps2 Ral GEF with PH domain and SH3 binding motif 2 10 36152498 36279236 - 22301074;30032202 116911602 MODEL JAAIVD010000005;XM_032915575;XM_032915576;XM_032915577 XP_032771466;XP_032771467;XP_032771468 ras-specific guanine nucleotide-releasing factor RalGPS2 protein-coding 625942133 LOC116895895 glyceraldehyde-3-phosphate dehydrogenase-like 3 116264141 116265162 + 116895895 MODEL JAAIVD010000012 pseudo 625942134 LOC116895552 uncharacterized LOC116895552 3 122341484 122342542 + 116895552 MODEL JAAIVD010000012;XR_004387287 ncrna 625942138 LOC116898082 mRNA turnover protein 4 homolog 4 92473166 92473871 + 116898082 MODEL JAAIVD010000003 pseudo 625942139 Cenpp centromere protein P FOUND IN nucleoplasm (ortholog) 14 68442653 68624415 - 22301074;30032202 116915225 MODEL JAAIVD010000009;XM_032919613 XP_032775504 protein-coding 625942151 LOC116904067 60S ribosomal protein L7-like 1 150447947 150450406 - 22301074;30032202 116904067 MODEL JAAIVD010000025;XM_032906934 XP_032762825 protein-coding 625942160 LOC116910700 small nucleolar RNA SNORA48 9 17910999 17911142 + 116910700 MODEL JAAIVD010000002;XR_004389228 snorna 625942163 Stx2 syntaxin 2 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); identical protein binding (ortholog); SNARE binding (ortholog); INVOLVED IN acrosome reaction (ortholog); cell differentiation (ortholog); cellular response to oxidative stress (ortholog); ASSOCIATED WITH male infertility (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell surface (ortholog); cell-cell junction (ortholog) 16 24965683 24988392 + 22301074;30032202 116885527 MODEL JAAIVD010000004;XM_032886824 XP_032742715 syntaxin-2 protein-coding 625942178 LOC116912627 ATP synthase F(0) complex subunit C2, mitochondrial-like 11 344728 345191 - 116912627 MODEL JAAIVD010000006 pseudo 625942179 Chst15 carbohydrate sulfotransferase 15 ENCODES a protein that exhibits 3'-phosphoadenosine 5'-phosphosulfate binding (ortholog); N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity (ortholog); INVOLVED IN hexose biosynthetic process (ortholog); ASSOCIATED WITH Lung Neoplasms (ortholog) 2 69523917 69601461 + 30032202 116891397 MODEL JAAIVD010000001;XM_032892421;XM_032892422 XP_032748312;XP_032748313 protein-coding 625942194 Vcl vinculin ENCODES a protein that exhibits actin binding (ortholog); alpha-catenin binding (ortholog); dystroglycan binding (ortholog); INVOLVED IN adherens junction assembly (ortholog); apical junction assembly (ortholog); axon extension (ortholog); PARTICIPATES IN E-cadherin signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); autism spectrum disorder (ortholog); cardiomyopathy (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); adherens junction (ortholog) 12 90736617 90826319 + 22301074 116913633 MODEL JAAIVD010000007;XM_032917903;XM_032917904 XP_032773794;XP_032773795 protein-coding 625942223 Chrna1 cholinergic receptor nicotinic alpha 1 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN monoatomic cation transport (ortholog); muscle cell cellular homeostasis (ortholog); musculoskeletal movement (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH autistic disorder (ortholog); centronuclear myopathy (ortholog); congenital myasthenic syndrome (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cell surface (ortholog); membrane (ortholog) 5 50921948 50936717 - 22301074;30032202 116900199 MODEL JAAIVD010000023;XM_032901959 XP_032757850 acetylcholine receptor subunit alpha protein-coding 625942236 Opn5 opsin 5 ENCODES a protein that exhibits 11-cis retinal binding (ortholog); G protein-coupled photoreceptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN cellular response to light stimulus (ortholog); cellular response to UV-A (ortholog); entrainment of circadian clock by photoperiod (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) 4 93482998 93530750 + 22301074 116898085 MODEL JAAIVD010000003;XM_032899472 XP_032755363 opsin-5 protein-coding 625942245 Sh2d5 SH2 domain containing 5 FOUND IN postsynaptic density (ortholog) 1 19957607 19966883 - 30032202 116893933 MODEL JAAIVD010000025;XM_032895655;XM_032895659;XM_032895663 XP_032751546;XP_032751550;XP_032751554 SH2 domain-containing protein 5 protein-coding 625942266 LOC116887769 U7 small nuclear RNA 18 11283345 11283403 - 116887769 MODEL JAAIVD010000013;XR_004386267 snrna 625942269 Asns asparagine synthetase (glutamine-hydrolyzing) ENCODES a protein that exhibits asparagine synthase (glutamine-hydrolyzing) activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to glucose starvation (ortholog); cellular response to hormone stimulus (ortholog); L-asparagine biosynthetic process (ortholog); PARTICIPATES IN Canavan disease pathway; ASSOCIATED WITH Asparagine Synthetase Deficiency (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog) 6 130632673 130650912 + 22301074;30032202 116904085 MODEL JAAIVD010000024;XM_032906952 XP_032762843 asparagine synthetase [glutamine-hydrolyzing] protein-coding 625942285 S100a14 S100 calcium binding protein A14 ENCODES a protein that exhibits chemokine receptor binding (ortholog); INVOLVED IN defense response to bacterium (ortholog); positive regulation of granulocyte chemotaxis (ortholog); positive regulation of monocyte chemotaxis (ortholog); FOUND IN cytosol (ortholog); perinuclear region of cytoplasm (ortholog) 3 63091663 63093745 - 30032202 116896598 MODEL JAAIVD010000012;XM_032897845;XM_032897846 XP_032753736;XP_032753737 protein S100-A14 protein-coding 625942296 Maged2 MAGE family member D2 INVOLVED IN female pregnancy (ortholog); renal sodium ion absorption (ortholog); ASSOCIATED WITH Bartter disease type 5 (ortholog); Dandy-Walker syndrome (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) X 12165151 12173206 - 30032202 116888736 MODEL JAAIVD010000014;XM_032890027;XM_032890028;XM_032890029;XM_032890030 XP_032745918;XP_032745919;XP_032745920;XP_032745921 melanoma-associated antigen D2 protein-coding 625942321 LOC116898091 exocrine gland-secreted peptide 1-like 4 95268391 95272576 - 22301074 116898091 MODEL JAAIVD010000003;XM_032899478 XP_032755369 protein-coding 625942325 LOC116902757 uncharacterized LOC116902757 6 64207394 64210931 + 116902757 MODEL JAAIVD010000024;XR_004388236 ncrna 625942330 LOC116900754 protein FAM209A-like 5 145527534 145529211 - 116900754 MODEL JAAIVD010000023;XM_032902464 XP_032758355 protein-coding 625942336 Rprd1b regulation of nuclear pre-mRNA domain containing 1B ENCODES a protein that exhibits identical protein binding (ortholog); RNA polymerase II complex binding (ortholog); INVOLVED IN positive regulation of cell population proliferation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of cell cycle process (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription preinitiation complex (ortholog) 5 137371811 137417662 + 22301074;30032202 116902234 MODEL JAAIVD010000023;XM_032904642;XM_032904643 XP_032760533;XP_032760534 regulation of nuclear pre-mRNA domain-containing protein 1B protein-coding 625942351 Ahcyl1 adenosylhomocysteinase like 1 ENCODES a protein that exhibits adenosylhomocysteinase activity (ortholog); enzyme regulator activity (ortholog); identical protein binding (ortholog); INVOLVED IN angiotensin-activated signaling pathway (ortholog); apoptotic process (ortholog); epithelial fluid transport (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) 3 50567922 50602113 + 30032202 116896386 MODEL JAAIVD010000012;XM_032897509;XM_032897510;XM_032897511;XM_032897512 XP_032753400;XP_032753401;XP_032753402;XP_032753403 S-adenosylhomocysteine hydrolase-like protein 1 protein-coding 625942379 Vps37d VPS37D subunit of ESCRT-I ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN ESCRT I complex (ortholog) 16 18959602 18965122 + 30032202 116885715 MODEL JAAIVD010000004;XM_032887023 XP_032742914 vacuolar protein sorting-associated protein 37D protein-coding 625942387 LOC116892134 galactoside 2-alpha-L-fucosyltransferase 2 2 153851238 153870630 + 22301074;30032202 116892134 MODEL JAAIVD010000001;XM_032893623;XR_004386914;XR_004386916;XR_004386917;XR_004386918 XP_032749514 protein-coding 625942406 C17H19orf67 chromosome 17 C19orf67 homolog 17 16279468 16282623 - 116886508 MODEL JAAIVD010000011;XM_032888016 XP_032743907 UPF0575 protein C19orf67 homolog protein-coding 625942415 LOC116893792 glyceraldehyde-3-phosphate dehydrogenase-like 2 39286622 39287731 + 116893792 MODEL JAAIVD010000001 pseudo 625942416 LOC116906540 60S ribosomal protein L37a-like 8 64603331 64603594 + 22301074 116906540 MODEL JAAIVD010000027;XM_032909238 XP_032765129 protein-coding 625942419 LOC116886028 single-stranded DNA-binding protein, mitochondrial-like 17 44474506 44474927 + 116886028 MODEL JAAIVD010000011 pseudo 625942420 LOC116885389 transcription factor BTF3-like 1 46648417 46648864 - 116885389 MODEL JAAIVD010000025 pseudo 625942421 LOC116899846 small nucleolar RNA SNORA17 4 81317563 81317694 - 116899846 MODEL JAAIVD010000003;XR_004387842 snorna 625942424 LOC116904345 14-3-3 protein zeta/delta-like 6 71842857 71962330 - 116904345 MODEL JAAIVD010000024 pseudo 625942425 LOC116894867 U6 spliceosomal RNA 2 144824080 144824184 + 116894867 MODEL JAAIVD010000001;XR_004387080 snrna 625942428 Ap3s1 adaptor related protein complex 3 subunit sigma 1 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN AP-3 adaptor complex (ortholog); membrane (ortholog); synaptic vesicle (ortholog) 15 40252086 40310935 - 22301074;30032202 116884959 MODEL JAAIVD010000010;XM_032886162;XM_032886163;XM_032886164;XR_004385909 XP_032742053;XP_032742054;XP_032742055 AP-3 complex subunit sigma-1 protein-coding 625942445 LOC116915145 small nucleolar RNA SNORA17 13 12390592 12390725 - 116915145 MODEL JAAIVD010000008;XR_004389815 snorna 625942448 Men1 menin 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cellular response to peptide hormone stimulus (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH adenoma (ortholog); adrenal cortical adenoma (ortholog); adrenocortical carcinoma (ortholog); FOUND IN chromatin (ortholog); chromosome, telomeric region (ortholog); cleavage furrow (ortholog) 2 1345374 1351292 - 22301074;30032202 116890662 MODEL JAAIVD010000001;XM_032891060;XM_032891061;XM_032891062;XM_032891063 XP_032746951;XP_032746952;XP_032746953;XP_032746954 menin protein-coding 625942471 Iscu iron-sulfur cluster assembly enzyme ENCODES a protein that exhibits ferrous iron binding (ortholog); iron-sulfur cluster chaperone activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN [2Fe-2S] cluster assembly (ortholog); [4Fe-4S] cluster assembly (ortholog); intracellular iron ion homeostasis (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); genetic disease (ortholog); myopathy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial [2Fe-2S] assembly complex (ortholog) 16 40196862 40203143 - 22301074;30032202 116885626 MODEL JAAIVD010000004;XM_032886928 XP_032742819 iron-sulfur cluster assembly enzyme ISCU, mitochondrial protein-coding 625942480 Kiss1 KiSS-1 metastasis suppressor ENCODES a protein that exhibits kisspeptin receptor binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN decidualization (ortholog); G protein-coupled receptor signaling pathway (ortholog); generation of ovulation cycle rhythm (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Delayed Puberty (ortholog); disorder of sexual development (ortholog); FOUND IN apical plasma membrane (ortholog); extracellular region (ortholog); neuronal cell body (ortholog) 10 2510695 2513170 - 30032202 116911465 MODEL JAAIVD010000005;XM_032915444 XP_032771335 metastasis-suppressor KiSS-1 protein-coding 625942486 Hoxa10 homeobox A10 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); histone deacetylase binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic limb morphogenesis (ortholog); male gonad development (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); Endometrial Neoplasms (ortholog); Female Urogenital Diseases (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 6 88821706 88831357 + 22301074;30032202 116903801 MODEL JAAIVD010000024;XM_032906492;XM_032906493 XP_032762383;XP_032762384 homeobox protein Hox-A10 protein-coding 625942495 LOC116908404 U1 spliceosomal RNA 8 85813659 85813820 + 116908404 MODEL JAAIVD010000027;XR_004388947 snrna 625942498 LOC116883708 prolactin-4A1 14 47072422 47080207 + 22301074;30032202 116883708 MODEL JAAIVD010000009;XM_032884922 XP_032740813 protein-coding 625942507 Mroh6 maestro heat like repeat family member 6 ASSOCIATED WITH intellectual disability (ortholog) 1 248200716 248206266 - 30032202 116912684 MODEL JAAIVD010000025;XM_032916822 XP_032772713 maestro heat-like repeat-containing protein family member 6 protein-coding 625942524 LOC116912919 5S ribosomal RNA 11 12518849 12518967 - 116912919 MODEL JAAIVD010000006;XR_004389492 rrna 625942527 LOC116894942 U1 spliceosomal RNA 2 171376364 171376517 - 116894942 MODEL JAAIVD010000001 pseudo 625942528 Kdm4d lysine demethylase 4D ENCODES a protein that exhibits chromatin DNA binding (ortholog); damaged DNA binding (ortholog); histone demethylase activity (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); DNA damage response (ortholog); double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH nephroblastoma (ortholog); FOUND IN nucleus (ortholog); pericentric heterochromatin (ortholog); site of double-strand break (ortholog) 8 10256450 10280650 - 30032202 116907912 MODEL JAAIVD010000027;XM_032911112 XP_032767003 lysine-specific demethylase 4D protein-coding 625942534 LOC116898428 endogenous retrovirus group K member 6 Gag polyprotein-like 4 90930212 90931858 + 22301074 116898428 MODEL JAAIVD010000003;XM_032899706 XP_032755597 protein-coding 625942537 LOC116888136 tubulin gamma-1 chain-like X 106952226 106952964 - 116888136 MODEL JAAIVD010000014 pseudo 625942538 Mcu mitochondrial calcium uniporter ENCODES a protein that exhibits calcium channel activity (ortholog); identical protein binding (ortholog); uniporter activity (ortholog); INVOLVED IN calcium import into the mitochondrion (ortholog); calcium-mediated signaling (ortholog); cell migration (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; FOUND IN calcium channel complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 18 25296843 25462814 - 30032202 116887244 MODEL JAAIVD010000013;XM_032888810 XP_032744701 calcium uniporter protein, mitochondrial protein-coding 625942550 LOC116888299 ubiquitin-40S ribosomal protein S27a-like X 60554835 60555370 - 22301074;30032202 116888299 MODEL JAAIVD010000014;XM_032889571 XP_032745462 protein-coding 625942555 LOC116883261 protein S100-A11-like 14 74929894 74930530 - 116883261 MODEL JAAIVD010000009 pseudo 625942556 LOC116900112 olfactory receptor 1J4-like 5 13162200 13163138 - 22301074;30032202 116900112 MODEL JAAIVD010000023;XM_032901889 XP_032757780 protein-coding 625942559 Akain1 A-kinase anchor inhibitor 1 ENCODES a protein that exhibits protein kinase A binding (ortholog); INVOLVED IN intracellular protein localization (ortholog); negative regulation of protein-containing complex assembly (ortholog); FOUND IN cytosol (ortholog) 4 179028522 179073636 + 116898293 MODEL JAAIVD010000003;XM_032899645 XP_032755536 A-kinase anchor protein inhibitor 1 protein-coding 625942565 Grp gastrin releasing peptide ENCODES a protein that exhibits neuropeptide hormone activity (ortholog); INVOLVED IN cellular response to sodium phosphate (ortholog); mast cell degranulation (ortholog); negative regulation of transmission of nerve impulse (ortholog); ASSOCIATED WITH amnestic disorder (ortholog); Aortic Calcification (ortholog); cerebrovascular disease (ortholog); FOUND IN extracellular region (ortholog); neuron projection (ortholog); neuronal dense core vesicle (ortholog) 15 65390684 65404274 - 22301074;30032202 116884503 MODEL JAAIVD010000010;XM_032885633 XP_032741524 gastrin-releasing peptide protein-coding 625942572 Ism2 isthmin 2 7 101376226 101394732 - 116906165 MODEL JAAIVD010000026;XM_032909144 XP_032765035 isthmin-2 protein-coding 625942582 LOC116884887 farnesyl pyrophosphate synthase-like 1 39374474 39375229 - 116884887 MODEL JAAIVD010000025 pseudo 625942583 LOC116902657 U6 spliceosomal RNA 5 104295739 104295845 - 116902657 MODEL JAAIVD010000023;XR_004388220 snrna 625942586 Wdr46 WD repeat domain 46 INVOLVED IN ribosomal small subunit biogenesis (ortholog); ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN nucleolus (ortholog); small-subunit processome (ortholog) 18 6948459 6956159 + 22301074;30032202 116887584 MODEL JAAIVD010000013;XM_032889209 XP_032745100 WD repeat-containing protein 46 protein-coding 625942604 LOC116911207 transmembrane epididymal protein 1-like 10 33276444 33277440 - 116911207 MODEL JAAIVD010000005;XM_032915083 XP_032770974 protein-coding 625942609 LOC116888554 SNF-related serine/threonine-protein kinase-like X 122914412 122916569 + 22301074;30032202 116888554 MODEL JAAIVD010000014;XM_032889861 XP_032745752 protein-coding 625942613 Med19 mediator complex subunit 19 PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH intellectual disability (ortholog); FOUND IN mediator complex (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 5 62060621 62070057 + 22301074;30032202 116901584 MODEL JAAIVD010000023;XM_032903599 XP_032759490 mediator of RNA polymerase II transcription subunit 19 protein-coding 625942622 Top2a DNA topoisomerase II alpha ENCODES a protein that exhibits ATP binding (ortholog); ATP-dependent activity, acting on DNA (ortholog); chromatin binding (ortholog); INVOLVED IN apoptotic chromosome condensation (ortholog); cerebellar granule cell differentiation (ortholog); cerebellar Purkinje cell differentiation (ortholog); PARTICIPATES IN doxorubicin pharmacodynamics pathway; etoposide pharmacodynamics pathway; etoposide pharmacokinetics pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); adenoid cystic carcinoma (ortholog); adrenocortical carcinoma (ortholog); FOUND IN centriole (ortholog); chromosome, centromeric region (ortholog); condensed chromosome (ortholog) 9 55420581 55451553 + 22301074;30032202 116909523 MODEL JAAIVD010000002;XM_032913131 XP_032769022 DNA topoisomerase 2-alpha protein-coding 625942661 LOC116897240 60S ribosomal protein L35-like 3 194352276 194352642 - 116897240 MODEL JAAIVD010000012 pseudo 625942662 LOC116897647 U2 spliceosomal RNA 3 177983920 177984097 + 116897647 MODEL JAAIVD010000012 pseudo 625942663 Fgd5 FYVE, RhoGEF and PH domain containing 5 ASSOCIATED WITH Breast Neoplasms (ortholog); Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) 6 54866797 54955445 - 22301074;30032202 116903493 MODEL JAAIVD010000024;XM_032906081 XP_032761972 FYVE, RhoGEF and PH domain-containing protein 5 protein-coding 625942687 LOC116894794 uncharacterized LOC116894794 2 290719 291812 + 116894794 MODEL JAAIVD010000001;XR_004387039 ncrna 625942692 LOC116897655 U4 spliceosomal RNA 3 163468903 163469035 + 116897655 MODEL JAAIVD010000012 pseudo 625942693 LOC116914970 ubiquitin-conjugating enzyme E2 variant 2-like 13 19664912 19665354 + 116914970 MODEL JAAIVD010000008 pseudo 625942694 LOC116883565 histone H2A type 1-F 14 42558005 42558810 + 22301074;30032202 116883565 MODEL JAAIVD010000009;XM_032884746 XP_032740637 protein-coding 625942698 LOC116902486 U6 spliceosomal RNA 5 78640483 78640587 + 116902486 MODEL JAAIVD010000023;XR_004388102 snrna 625942701 Ffar1 free fatty acid receptor 1 ENCODES a protein that exhibits bioactive lipid receptor activity (ortholog); fatty acid binding (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); glucose homeostasis (ortholog); insulin secretion (ortholog); ASSOCIATED WITH type 2 diabetes mellitus (ortholog); FOUND IN plasma membrane (ortholog) 2 165156564 165157547 + 22301074;30032202 116894449 MODEL JAAIVD010000001;XM_032896154 XP_032752045 protein-coding 625942705 LOC116884347 WW domain binding protein 1-like 15 34430512 34431564 - 116884347 MODEL JAAIVD010000010 pseudo 625942706 LOC116895634 elongation factor 1-alpha 1-like 3 175844891 175846407 - 22301074;30032202 116895634 MODEL JAAIVD010000012;XM_032896842 XP_032752733 protein-coding 625942710 LOC116902900 taste receptor type 2 member 39 6 98057351 98058391 - 22301074;30032202 116902900 MODEL JAAIVD010000024;XM_032905228 XP_032761119 protein-coding 625942714 Wnt1 Wnt family member 1 ENCODES a protein that exhibits cytokine activity (ortholog); protein domain specific binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); astrocyte-dopaminergic neuron signaling (ortholog); bone development (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); atherosclerosis (ortholog); breast cancer (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular region (ortholog) 1 271611676 271615832 + 22301074;30032202 116890244 MODEL JAAIVD010000025;XM_032890972 XP_032746863 proto-oncogene Wnt-1 protein-coding 625942722 Ctns cystinosin, lysosomal cystine transporter ENCODES a protein that exhibits L-cystine transmembrane transporter activity (ortholog); solute:proton symporter activity (ortholog); INVOLVED IN adult walking behavior (ortholog); ATP metabolic process (ortholog); brain development (ortholog); PARTICIPATES IN cysteine metabolic pathway; mercaptolactate-cysteine disulfiduria pathway; ocular nonnephropathic cystinosis pathway; ASSOCIATED WITH Abderhalden-Kaufmann-Lignac Syndrome (ortholog); cystinosis (ortholog); Cystinosis, Late-Onset Juvenile or Adolescent Nephropathic Type (ortholog); FOUND IN early endosome (ortholog); late endosome (ortholog); lysosomal membrane (ortholog) 9 42313719 42329589 + 30032202 116910285 MODEL JAAIVD010000002;XM_032914157 XP_032770048 cystinosin protein-coding 625942737 LOC116908427 small nucleolar RNA SNORD105 8 17152846 17152929 + 116908427 MODEL JAAIVD010000027;XR_004388959 snorna 625942740 LOC116887434 proteasome subunit beta type-8-like 18 8124731 8126048 - 116887434 MODEL JAAIVD010000013;XR_004386214 pseudo 625942745 Trnai-aau transfer RNA isoleucine (anticodon AAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41658010 41658083 - 116884160 MODEL JAAIVD010000009 trna 625942746 Ccdc13 coiled-coil domain containing 13 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN axoneme assembly (ortholog); cytoplasmic microtubule organization (ortholog); DNA damage response (ortholog); FOUND IN axonemal central pair (ortholog); centriolar satellite (ortholog); centrosome (ortholog) 8 112954600 112996833 - 30032202 116907980 MODEL JAAIVD010000027;XM_032911223 XP_032767114 coiled-coil domain-containing protein 13 protein-coding 625942766 LOC116904156 uncharacterized LOC116904156 6 145271657 145292023 + 116904156 MODEL JAAIVD010000024;XR_004388333 ncrna 625942771 Stk16 serine/threonine kinase 16 ENCODES a protein that exhibits protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to transforming growth factor beta stimulus (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); protein autophosphorylation (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); Golgi-associated vesicle (ortholog) 4 148568261 148571509 + 22301074;30032202 116899526 MODEL JAAIVD010000003;XM_032901393;XM_032901394 XP_032757284;XP_032757285 serine/threonine-protein kinase 16 protein-coding 625942784 LOC116898488 adenosylhomocysteinase-like 4 120871928 120873148 - 116898488 MODEL JAAIVD010000003 pseudo 625942785 LOC116897612 small nucleolar RNA SNORA17 3 97996219 97996334 + 116897612 MODEL JAAIVD010000012 pseudo 625942786 LOC116897646 U2 spliceosomal RNA 3 23656555 23656698 - 116897646 MODEL JAAIVD010000012 pseudo 625942787 Thpo thrombopoietin ENCODES a protein that exhibits cytokine activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via STAT (ortholog); cellular response to lipopolysaccharide (ortholog); megakaryocyte development (ortholog); ASSOCIATED WITH arteriosclerosis obliterans (ortholog); cardiomyopathy (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN extracellular region (ortholog) 4 5548779 5553861 - 22301074;30032202;33403676 116898706 MODEL JAAIVD010000003;XM_032899991;XM_032899992;XM_032899993;XM_032899994;XM_032899995;XM_032899996 XP_032755882;XP_032755883;XP_032755884;XP_032755885;XP_032755886;XP_032755887 protein-coding 625942811 LOC116911991 PRAME family member 6-like 11 48559674 48560998 - 116911991 MODEL JAAIVD010000006 pseudo 625942812 Dock9 dedicator of cytokinesis 9 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN positive regulation of GTPase activity (ortholog) 12 3088206 3344572 + 30032202 116913357 MODEL JAAIVD010000007;XM_032917510;XM_032917512;XM_032917513;XM_032917514;XM_032917515 XP_032773401;XP_032773403;XP_032773404;XP_032773405;XP_032773406 dedicator of cytokinesis protein 9 protein-coding 625942885 LOC116907737 uncharacterized LOC116907737 8 103188025 103189265 + 116907737 MODEL JAAIVD010000027;XR_004388840 ncrna 625942889 Rasa1 RAS p21 protein activator 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); GTPase binding (ortholog); kinase binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); angiogenesis (ortholog); blood vessel morphogenesis (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; epidermal growth factor/neuregulin signaling pathway; insulin signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); arteriovenous malformation (ortholog); basal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear membrane (ortholog) 3 210773174 210841432 + 22301074 116897317 MODEL JAAIVD010000012;XM_032899073 XP_032754964 ras GTPase-activating protein 1 protein-coding 625942918 LOC116896031 uncharacterized LOC116896031 3 185207579 185208595 - 116896031 MODEL JAAIVD010000012;XM_032897037 XP_032752928 growth/differentiation factor 3 protein-coding 625942922 Bag5 BAG cochaperone 5 ENCODES a protein that exhibits protein kinase binding (ortholog); protein-folding chaperone binding (ortholog); ubiquitin ligase inhibitor activity (ortholog); INVOLVED IN Golgi organization (ortholog); negative regulation of neuron projection development (ortholog); negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH dilated cardiomyopathy 2F (ortholog); genetic disease (ortholog); Parkinson's disease (ortholog); FOUND IN cytosol (ortholog); inclusion body (ortholog); junctional membrane complex (ortholog) 7 129304322 129308117 - 22301074;30032202 116905497 MODEL JAAIVD010000026;XM_032908502;XM_032908503;XM_032908504 XP_032764393;XP_032764394;XP_032764395 BAG family molecular chaperone regulator 5 protein-coding 625942934 LOC116883560 histone H2B type 1-M-like 14 41969149 41970939 - 22301074;30032202 116883560 MODEL JAAIVD010000009;XM_032884741 XP_032740632 protein-coding 625942941 LOC116898353 keratin-associated protein 13-1-like 4 55081587 55082163 - 116898353 MODEL JAAIVD010000003;XM_032899671 XP_032755562 protein-coding 625942945 LOC116905802 M-phase phosphoprotein 6-like 7 94563121 94563605 - 116905802 MODEL JAAIVD010000026 pseudo 625942946 LOC116914355 beta-defensin 11 13 64578600 64585513 - 22301074;30032202 116914355 MODEL JAAIVD010000008;XM_032918569 XP_032774460 protein-coding 625942950 LOC116883703 cathepsin Q-like 14 77170954 77175073 + 30032202 116883703 MODEL JAAIVD010000009;XM_032884918 XP_032740809 protein-coding 625942959 Fgf23 fibroblast growth factor 23 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); type 1 fibroblast growth factor receptor binding (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); cellular response to interleukin-6 (ortholog); cellular response to leptin stimulus (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH autosomal dominant hypophosphatemic rickets (ortholog); calcinosis (ortholog); chronic kidney disease (ortholog); FOUND IN extracellular region (ortholog) 6 20820952 20828685 - 22301074;30032202 116904578 MODEL JAAIVD010000024;XM_032907374 XP_032763265 protein-coding 625942965 Manbal mannosidase beta like 5 136714348 136743738 + 22301074;30032202 116902224 MODEL JAAIVD010000023;XM_032904629 XP_032760520 protein MANBAL protein-coding 625942972 Timm17a translocase of inner mitochondrial membrane 17A ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN positive regulation of protein processing (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); TIM23 mitochondrial import inner membrane translocase complex (ortholog) 10 408089 419875 + 22301074;30032202 116911314 MODEL JAAIVD010000005;XM_032915229 XP_032771120 mitochondrial import inner membrane translocase subunit Tim17-A protein-coding 625942982 Arl2bp ARF like GTPase 2 binding protein ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN maintenance of protein location in nucleus (ortholog); positive regulation of tyrosine phosphorylation of STAT protein (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); male infertility (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) 17 1551900 1561290 + 30032202 116886522 MODEL JAAIVD010000011;XM_032888034 XP_032743925 ADP ribosylation factor like GTPase 2 binding protein;ADP-ribosylation factor-like protein 2-binding protein protein-coding 625942992 Ccnd1 cyclin D1 ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase activator activity (ortholog); cyclin-dependent protein serine/threonine kinase regulator activity (ortholog); enzyme binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); cell population proliferation (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN E-cadherin signaling pathway; G1/S transition pathway; Notch signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); FOUND IN bicellular tight junction (ortholog); cyclin D1-CDK4 complex (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog) 2 4796283 4804717 + 30032202 116890816 MODEL JAAIVD010000001;XM_032891312;XM_032891313 XP_032747203;XP_032747204 G1/S-specific cyclin-D1 protein-coding 625943003 Gemin7 gem nuclear organelle associated protein 7 INVOLVED IN spliceosomal snRNP assembly (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Gemini of Cajal bodies (ortholog) 2 171050285 171059736 + 22301074;30032202 116892515 MODEL JAAIVD010000001;XM_032894270;XM_032894271 XP_032750161;XP_032750162 gem-associated protein 7 protein-coding 625943012 LOC116914916 mitochondrial import inner membrane translocase subunit Tim23-like 13 60557273 60558316 - 116914916 MODEL JAAIVD010000008 pseudo 625943013 Dtl denticleless E3 ubiquitin protein ligase adapter ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN DNA damage response (ortholog); mitotic G2 DNA damage checkpoint signaling (ortholog); positive regulation of G2/M transition of mitotic cell cycle (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog); Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog) 10 69627901 69665385 - 22301074;30032202 116911498 MODEL JAAIVD010000005;XM_032915483;XM_032915485;XM_032915486;XM_032915487 XP_032771374;XP_032771376;XP_032771377;XP_032771378 denticleless E3 ubiquitin protein ligase homolog;denticleless protein homolog protein-coding 625943041 LOC116913518 uncharacterized LOC116913518 12 2426646 2428249 - 116913518 MODEL JAAIVD010000007;XR_004389626 ncrna 625943045 Trnp1 TMF1 regulated nuclear protein 1 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN cerebellar cortex morphogenesis (ortholog); neural precursor cell proliferation (ortholog); regulation of cell cycle (ortholog); FOUND IN euchromatin (ortholog); nucleus (ortholog) 1 24742487 24749689 + 30032202 116895191 MODEL JAAIVD010000025;XM_032896536;XM_032896541 XP_032752427;XP_032752432 TMF-regulated nuclear protein 1 protein-coding 625943053 LOC116889853 ubiquitin-conjugating enzyme E2 variant 1-like 1 152970468 152970906 - 30032202 116889853 MODEL JAAIVD010000025;XM_032890681 XP_032746572 protein-coding 625943057 LOC116886509 cytochrome b-245 light chain ENCODES a protein that exhibits electron transfer activity (ortholog); protein heterodimerization activity (ortholog); SH3 domain binding (ortholog); INVOLVED IN cellular response to angiotensin (ortholog); cellular response to gamma radiation (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN thyroid hormone biosynthetic pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); asthma (ortholog); atherosclerosis (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); dendrite (ortholog) 17 42064578 42072582 - 22301074;30032202 116886509 MODEL JAAIVD010000011;XM_032888017 XP_032743908 protein-coding 625943067 Nsa2 NSA2 ribosome biogenesis factor ASSOCIATED WITH primary biliary cholangitis (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 3 199483126 199489247 + 30032202 116897267 MODEL JAAIVD010000012;XM_032898999 XP_032754890 ribosome biogenesis protein NSA2 homolog protein-coding 625943077 LOC116897713 roundabout homolog 2-like 4 66546833 67633031 + 30032202 116897713 MODEL JAAIVD010000003;XM_032899171;XM_032899172 XP_032755062;XP_032755063 protein-coding 625943087 LOC116898490 tubulin beta chain-like 4 121407277 121484895 + 116898490 MODEL JAAIVD010000003 pseudo 625943088 LOC116887783 small nucleolar RNA SNORA24 18 17713567 17713695 - 116887783 MODEL JAAIVD010000013;XR_004386280 snorna 625943091 Vsig4 V-set and immunoglobulin domain containing 4 ENCODES a protein that exhibits complement component C3b binding (ortholog); INVOLVED IN negative regulation of complement activation, alternative pathway (ortholog); negative regulation of interleukin-2 production (ortholog); negative regulation of T cell proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN protein-containing complex (ortholog) X 55171847 55198600 - 30032202 116889306 MODEL JAAIVD010000014;XM_032890428 XP_032746319 V-set and immunoglobulin domain-containing protein 4 protein-coding 625943102 LOC116909638 olfactory receptor 2T29-like 9 39663478 39664440 + 22301074 116909638 MODEL JAAIVD010000002;XM_032913282 XP_032769173 protein-coding 625943105 LOC116899982 60S ribosomal protein L19-like 5 135701948 135702826 + 116899982 MODEL JAAIVD010000023 pseudo 625943106 LOC116913681 uncharacterized LOC116913681 12 52640466 52644421 + 116913681 MODEL JAAIVD010000007;XR_004389636 ncrna 625943110 Ears2 glutamyl-tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits glutamate-tRNA ligase activity (ortholog); glutamate-tRNA(Gln) ligase activity (ortholog); INVOLVED IN glutamyl-tRNA aminoacylation (ortholog); tRNA aminoacylation for mitochondrial protein translation (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; glutamic acid/glutamate metabolic pathway; homocarnosinosis pathway; ASSOCIATED WITH combined oxidative phosphorylation deficiency (ortholog); combined oxidative phosphorylation deficiency 12 (ortholog); Developmental Disabilities (ortholog); FOUND IN mitochondrion (ortholog) 2 79761035 79788228 + 22301074;30032202 116891559 MODEL JAAIVD010000001;XM_032892736 XP_032748627 probable glutamate--tRNA ligase, mitochondrial protein-coding 625943123 LOC116898037 uncharacterized LOC116898037 4 81918461 81927225 - 116898037 MODEL JAAIVD010000003;XR_004387635 ncrna 625943128 Mtss2 MTSS I-BAR domain containing 2 ENCODES a protein that exhibits actin monomer binding (ortholog); GTPase activator activity (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); cellular response to platelet-derived growth factor stimulus (ortholog); lamellipodium organization (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); intellectual developmental disorder with ocular anomalies and distinctive facial features (ortholog); syndromic intellectual disability (ortholog); FOUND IN cortical actin cytoskeleton (ortholog); focal adhesion (ortholog); lamellipodium (ortholog) 17 30429878 30450367 + 22301074;30032202 116886064 MODEL JAAIVD010000011;XM_032887371;XM_032887372;XM_032887374;XM_032887375;XM_032887376 XP_032743262;XP_032743263;XP_032743265;XP_032743266;XP_032743267 protein MTSS 2 protein-coding 625943160 Rhoq ras homolog family member Q ENCODES a protein that exhibits GBD domain binding (ortholog); GTPase activity (ortholog); profilin binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); cortical actin cytoskeleton organization (ortholog); GTP metabolic process (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; insulin signaling pathway; Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN actin filament (ortholog); membrane raft (ortholog); plasma membrane (ortholog) 7 5986533 6022546 - 22301074;30032202 116905755 MODEL JAAIVD010000026;XM_032908723 XP_032764614 rho-related GTP-binding protein RhoQ protein-coding 625943169 Acsm1 acyl-CoA synthetase medium chain family member 1 ENCODES a protein that exhibits benzoate-CoA ligase activity (ortholog); decanoate-CoA ligase activity (ortholog); fatty acid ligase activity (ortholog); INVOLVED IN fatty acid biosynthetic process (ortholog); PARTICIPATES IN butanoate metabolic pathway; fatty acid beta degradation pathway; valproic acid pharmacokinetics pathway; ASSOCIATED WITH Lung Neoplasms (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 2 82007019 82041579 - 30032202 116893920 MODEL JAAIVD010000001;XM_032895641 XP_032751532 acyl-coenzyme A synthetase ACSM1, mitochondrial protein-coding 625943187 LOC116907300 olfactory receptor 7G2-like 8 14907386 14908345 + 22301074;30032202 116907300 MODEL JAAIVD010000027;XM_032910248 XP_032766139 protein-coding 625943191 Mtarc1 mitochondrial amidoxime reducing component 1 ENCODES a protein that exhibits molybdenum ion binding (ortholog); molybdopterin cofactor binding (ortholog); nitrate reductase activity (ortholog); INVOLVED IN cellular detoxification of nitrogen compound (ortholog); nitrate metabolic process (ortholog); nitric oxide biosynthetic process (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); FOUND IN mitochondrion (ortholog); nitric-oxide synthase complex (ortholog) 10 62952076 62975424 - 22301074;30032202 116911199 MODEL JAAIVD010000005;XM_032915072 XP_032770963 mitochondrial amidoxime-reducing component 1 protein-coding 625943202 LOC116910525 keratin-associated protein 3-1 9 54398759 54399055 - 22301074;30032202 116910525 MODEL JAAIVD010000002;XM_032914429 XP_032770320 protein-coding 625943205 Ccs copper chaperone for superoxide dismutase ENCODES a protein that exhibits copper ion binding (ortholog); enzyme binding (ortholog); INVOLVED IN positive regulation of oxidoreductase activity (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Chronic Hepatitis (ortholog); neurodegenerative disease (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleus (ortholog) 2 2820039 2841315 + 30032202 116890758 MODEL JAAIVD010000001;XM_032891215 XP_032747106 protein-coding 625943217 LOC116884313 uncharacterized LOC116884313 15 39564781 39585155 - 116884313 MODEL JAAIVD010000010;XR_004385865 ncrna 625943223 Pds5b PDS5 cohesin associated factor B ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN lens development in camera-type eye (ortholog); mitotic sister chromatid cohesion (ortholog); negative regulation of cell population proliferation (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 16 230314 361958 + 30032202 116885771 MODEL JAAIVD010000004;XM_032887088;XM_032887089;XM_032887090;XM_032887091;XM_032887092;XM_032887093 XP_032742979;XP_032742980;XP_032742981;XP_032742982;XP_032742983;XP_032742984 sister chromatid cohesion protein PDS5 homolog B protein-coding 625943269 LOC116897424 U6 spliceosomal RNA 3 53520881 53520985 + 116897424 MODEL JAAIVD010000012;XR_004387466 snrna 625943272 LOC116904220 uncharacterized LOC116904220 6 154299663 154303342 + 116904220 MODEL JAAIVD010000024;XR_004388335 ncrna 625943276 LOC116887918 ER membrane protein complex subunit 7-like X 57071184 57073572 + 116887918 MODEL JAAIVD010000014 pseudo 625943277 LOC116899344 transcription initiation factor TFIID subunit 9 4 119505293 119506469 + 22301074;30032202 116899344 MODEL JAAIVD010000003;XM_032901032 XP_032756923 protein-coding 625943282 LOC116888559 diphosphoinositol polyphosphate phosphohydrolase 3-alpha X 16591976 16592909 + 30032202 116888559 MODEL JAAIVD010000014;XM_032889865 XP_032745756 protein-coding 625943287 LOC116906901 putative gustatory receptor clone PTE03 8 15205997 15207290 - 22301074;30032202 116906901 MODEL JAAIVD010000027;XM_032909812;XM_032909813 XP_032765703;XP_032765704 protein-coding 625943294 LOC116885955 40S ribosomal protein S12-like 1 3758104 3758577 + 22301074;30032202 116885955 MODEL JAAIVD010000025;XM_032887276 XP_032743167 protein-coding 625943299 Ccnjl cyclin J like ASSOCIATED WITH genetic disease (ortholog) 9 26343497 26400828 + 30032202 116910005 MODEL JAAIVD010000002;XM_032913792 XP_032769683 cyclin-J-like protein protein-coding 625943309 LOC116888842 F-box/LRR-repeat protein 17-like X 126526172 126528723 - 116888842 MODEL JAAIVD010000014;XM_032890112 XP_032746003 protein-coding 625943315 LOC116890411 small nucleolar RNA SNORA73 family 1 25900852 25901055 + 116890411 MODEL JAAIVD010000025;XR_004386612 snorna 625943318 Nsun6 NOP2/Sun RNA methyltransferase 6 ENCODES a protein that exhibits tRNA (cytidine-N5)-methyltransferase activity (ortholog); tRNA binding (ortholog); INVOLVED IN tRNA C5-cytosine methylation (ortholog); tRNA methylation (ortholog); tRNA modification (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 82 (ortholog); Breast Neoplasms (ortholog); Neoplasm Metastasis (ortholog); FOUND IN cytoplasm (ortholog) 14 8716904 8755400 + 22301074;30032202 116883158 MODEL JAAIVD010000009;XM_032884181;XM_032884182 XP_032740072;XP_032740073 tRNA (cytosine(72)-C(5))-methyltransferase NSUN6 protein-coding 625943336 LOC116914154 U6atac minor spliceosomal RNA 12 85384887 85385012 - 116914154 MODEL JAAIVD010000007;XR_004389705 snrna 625943339 Aqp8 aquaporin 8 ENCODES a protein that exhibits ammonium channel activity (ortholog); methylammonium channel activity (ortholog); urea channel activity (ortholog); INVOLVED IN ammonium import across plasma membrane (ortholog); ammonium transmembrane transport (ortholog); B cell differentiation (ortholog); ASSOCIATED WITH brain ischemia (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) 2 78396663 78402499 - 22301074;30032202 116891544 MODEL JAAIVD010000001;XM_032892701;XM_032892702 XP_032748592;XP_032748593 aquaporin-8 protein-coding 625943353 LOC116886538 chemokine-like factor 17 12547949 12556536 + 116886538 MODEL JAAIVD010000011;XM_032888057;XM_032888058 XP_032743948;XP_032743949 protein-coding 625943365 Scgn secretagogin, EF-hand calcium binding protein FOUND IN cytosol (ortholog) 14 42967682 43004728 - 22301074;30032202 116883860 MODEL JAAIVD010000009;XM_032885128 XP_032741019 secretagogin protein-coding 625943380 LOC116893289 glyceraldehyde-3-phosphate dehydrogenase-like 2 148859553 148860556 + 116893289 MODEL JAAIVD010000001 pseudo 625943381 Tmem143 transmembrane protein 143 INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); FOUND IN mitochondrion (ortholog) 2 153602491 153620037 - 30032202 116892116 MODEL JAAIVD010000001;XM_032893595;XM_032893596;XM_032893597;XM_032893598 XP_032749486;XP_032749487;XP_032749488;XP_032749489 protein-coding 625943400 LOC116892798 cellular tumor antigen p53-like 2 186393384 186395049 + 22301074;30032202 116892798 MODEL JAAIVD010000001;XM_032894673 XP_032750564 protein-coding 625943405 Mkrn2os MKRN2 opposite strand 6 31119957 31127625 + 116903381 MODEL JAAIVD010000024;XM_032905873;XM_032905874 XP_032761764;XP_032761765 MKRN2 opposite strand protein protein-coding 625943416 LOC116890989 macrophage-expressed gene 1 protein 2 12479870 12482650 + 30032202 116890989 MODEL JAAIVD010000001;XM_032891663 XP_032747554 protein-coding 625943422 LOC116896264 uncharacterized LOC116896264 3 29479314 29480031 + 116896264 MODEL JAAIVD010000012;XR_004387320 ncrna 625943426 Zdhhc23 zDHHC palmitoyltransferase 23 INVOLVED IN protein localization to plasma membrane (ortholog); protein palmitoylation (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog) 4 28860150 28872812 - 30032202 116898857 MODEL JAAIVD010000003;XM_032900219;XM_032900220;XM_032900221;XM_032900222;XM_032900223 XP_032756110;XP_032756111;XP_032756112;XP_032756113;XP_032756114 palmitoyltransferase ZDHHC23;zinc finger DHHC-type palmitoyltransferase 23 protein-coding 625943445 Mcph1 microcephalin 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN bone development (ortholog); cerebral cortex development (ortholog); establishment of mitotic spindle orientation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH autosomal recessive primary microcephaly (ortholog); breast cancer (ortholog); Breast Neoplasms (ortholog) 13 65504962 65591663 - 22301074;30032202 116914448 MODEL JAAIVD010000008;XM_032918749 XP_032774640 microcephalin protein-coding 625943461 LOC116885108 small nucleolar RNA SNORD58 15 56982875 56982940 - 116885108 MODEL JAAIVD010000010;XR_004385973 snorna 625943464 Gpr12 G protein-coupled receptor 12 ENCODES a protein that exhibits phosphatidylcholine binding (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); intracellular calcium ion homeostasis (ortholog); ASSOCIATED WITH obesity (ortholog) 16 7298111 7300215 + 22301074 116885756 MODEL JAAIVD010000004;XM_032887072 XP_032742963 G-protein coupled receptor 12 protein-coding 625943470 Copb2 coat protein complex I subunit beta 2 ENCODES a protein that exhibits protein kinase C binding (ortholog); INVOLVED IN intra-Golgi vesicle-mediated transport (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); ASSOCIATED WITH COVID-19 (ortholog); genetic disease (ortholog); microcephaly (ortholog); FOUND IN COPI vesicle coat (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) 8 89937156 89959290 + 22301074;30032202 116907112 MODEL JAAIVD010000027;XM_032910087 XP_032765978 COPI coat complex subunit beta 2;coatomer subunit beta' protein-coding 625943496 LOC116911535 elongation factor 2-like 10 85664581 85667667 - 116911535 MODEL JAAIVD010000005 pseudo 625943497 Pdcd6ip programmed cell death 6 interacting protein ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); protein dimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN actomyosin contractile ring assembly (ortholog); bicellular tight junction assembly (ortholog); extracellular exosome biogenesis (ortholog); ASSOCIATED WITH osteoarthritis (ortholog); primary autosomal recessive microcephaly 29 (ortholog); FOUND IN actomyosin (ortholog); centrosome (ortholog); cytosol (ortholog) 8 104517761 104572534 - 22301074;30032202 116907800 MODEL JAAIVD010000027;XM_032910945;XM_032910946 XP_032766836;XP_032766837 programmed cell death 6-interacting protein protein-coding 625943523 LOC116888930 cysteine protease ATG4A-like X 93918090 93924470 - 22301074 116888930 MODEL JAAIVD010000014;XM_032890172 XP_032746063 protein-coding 625943531 Dok2 docking protein 2 ENCODES a protein that exhibits transmembrane receptor protein tyrosine kinase adaptor activity (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); Ras protein signal transduction (ortholog); PARTICIPATES IN interleukin-2 signaling pathway; interleukin-4 signaling pathway; ASSOCIATED WITH Crohn's disease (ortholog); lung adenocarcinoma (ortholog); Lung Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) 12 53590922 53603802 - 30032202 116913974 MODEL JAAIVD010000007;XM_032918243;XM_032918245;XM_032918246 XP_032774134;XP_032774136;XP_032774137 protein-coding 625943546 LOC116902087 60S ribosomal protein L19-like 5 129861659 129862230 - 116902087 MODEL JAAIVD010000023 pseudo 625943547 Psd2 pleckstrin and Sec7 domain containing 2 ASSOCIATED WITH pre-malignant neoplasm (ortholog); FOUND IN cleavage furrow (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) 15 8362110 8412663 - 22301074 116884481 MODEL JAAIVD010000010;XM_032885598 XP_032741489 PH and SEC7 domain-containing protein 2 protein-coding 625943566 Lrrc57 leucine rich repeat containing 57 ASSOCIATED WITH colorectal cancer (ortholog) 5 98729670 98735327 - 22301074 116901840 MODEL JAAIVD010000023;XM_032904019;XM_032904020;XM_032904021;XM_032904022 XP_032759910;XP_032759911;XP_032759912;XP_032759913 leucine-rich repeat-containing protein 57 protein-coding 625943585 Trnas-uga transfer RNA serine (anticodon UGA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889663 MODEL JAAIVD010000045 trna 625943586 Deptor DEP domain containing MTOR interacting protein ENCODES a protein that exhibits phosphatidic acid binding (ortholog); protein kinase inhibitor activity (ortholog); protein serine/threonine kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of cell size (ortholog); negative regulation of protein kinase activity (ortholog); negative regulation of TOR signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN lysosomal membrane (ortholog) 1 229525493 229664048 + 22301074 116911566 MODEL JAAIVD010000025;XM_032915557;XM_032915560 XP_032771448;XP_032771451 DEP domain-containing mTOR-interacting protein protein-coding 625943602 LOC116898201 uncharacterized LOC116898201 4 137830310 137835726 - 116898201 MODEL JAAIVD010000003;XR_004387641 ncrna 625943607 LOC116913679 uncharacterized LOC116913679 12 51080126 51084046 - 116913679 MODEL JAAIVD010000007;XR_004389635 ncrna 625943612 Ctps1 CTP synthase 1 ENCODES a protein that exhibits CTP synthase activity (ortholog); histone H1N76/N77 asparagine deamidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN B cell proliferation (ortholog); CTP biosynthetic process (ortholog); DNA repair-dependent chromatin remodeling (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; de novo pyrimidine biosynthetic pathway; dihydropyrimidinase deficiency pathway; ASSOCIATED WITH biliary tract benign neoplasm (ortholog); immunodeficiency 24 (ortholog); Nasopharyngeal Neoplasms (ortholog); FOUND IN chromatin (ortholog); cytoophidium (ortholog); cytoplasm (ortholog) 1 36418001 36447006 + 22301074;30032202 116897282 MODEL JAAIVD010000025;XM_032899018 XP_032754909 protein-coding 625943635 LOC116914521 40S ribosomal protein S19-like 13 70632768 70633182 + 116914521 MODEL JAAIVD010000008 pseudo 625943636 LOC116900103 low-density lipoprotein receptor-related protein 1B 5 18551693 18825841 - 22301074 116900103 MODEL JAAIVD010000023;XM_032901881 XP_032757772 protein-coding 625943683 LOC116896194 guanylate-binding protein 1 3 18203454 18219551 - 22301074;30032202 116896194 MODEL JAAIVD010000012;XM_032897242 XP_032753133 protein-coding 625943698 LOC116910052 uncharacterized LOC116910052 9 4125180 4127183 + 116910052 MODEL JAAIVD010000002;XR_004389124 ncrna 625943702 LOC116901005 protein FAM98B-like 5 111143767 111149164 - 116901005 MODEL JAAIVD010000023 pseudo 625943703 Bpi bactericidal permeability increasing protein ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); INVOLVED IN defense response to bacterium (ortholog); immune response (ortholog); negative regulation of interleukin-6 production (ortholog); ASSOCIATED WITH Crohn's disease (ortholog); severe acute respiratory syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog) 5 137602082 137628576 + 22301074;30032202 116900730 MODEL JAAIVD010000023;XM_032902437 XP_032758328 bactericidal permeability-increasing protein protein-coding 625943722 Lmo2 LIM domain only 2 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN embryonic hemopoiesis (ortholog); negative regulation of erythrocyte differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN nucleus (ortholog); protein-containing complex (ortholog); transcription regulator complex (ortholog) 5 81798224 81810207 + 30032202 116901692 MODEL JAAIVD010000023;XM_032903816;XM_032903817;XM_032903818 XP_032759707;XP_032759708;XP_032759709 rhombotin-2 protein-coding 625943736 Slc12a5 solute carrier family 12 member 5 ENCODES a protein that exhibits ammonium channel activity (ortholog); chloride transmembrane transporter activity (ortholog); potassium:chloride symporter activity (ortholog); INVOLVED IN ammonium transmembrane transport (ortholog); chemical synaptic transmission (ortholog); chloride transport (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy (ortholog); developmental and epileptic encephalopathy 34 (ortholog); epilepsy (ortholog); FOUND IN cell periphery (ortholog); dendrite membrane (ortholog); dendritic shaft (ortholog) 5 152960299 153000142 - 22301074;30032202 116902339 MODEL JAAIVD010000023;XM_032904816;XM_032904817 XP_032760707;XP_032760708 protein-coding 625943769 LOC116907908 60S acidic ribosomal protein P0-like 8 110525888 110526864 + 116907908 MODEL JAAIVD010000027 pseudo 625943770 LOC116915195 small nucleolar RNA SNORA32 13 6373882 6374021 - 116915195 MODEL JAAIVD010000008 pseudo 625943771 Atp7b ATPase copper transporting beta ENCODES a protein that exhibits ATP binding (ortholog); copper ion binding (ortholog); copper ion transmembrane transporter activity (ortholog); INVOLVED IN cellular detoxification of copper ion (ortholog); cellular response to copper ion (ortholog); cellular response to manganese ion (ortholog); PARTICIPATES IN cisplatin drug pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); Anhaptoglobinemia (ortholog); Animal Disease Models (ortholog); FOUND IN apical part of cell (ortholog); basolateral plasma membrane (ortholog); bicellular tight junction (ortholog) 13 64361975 64437965 + 22301074 116914417 MODEL JAAIVD010000008;XM_032918678;XM_032918679;XM_032918680 XP_032774569;XP_032774570;XP_032774571 copper-transporting ATPase 2 protein-coding 625943805 LOC116889739 diadenylate cyclase-like 30032202 116889739 MODEL JAAIVD010000072;XM_032890611 XP_032746502 protein-coding 625943806 LOC116887729 small nucleolar RNA SNORA17 18 25532036 25532160 - 116887729 MODEL JAAIVD010000013 pseudo 625943807 LOC116892672 aldehyde dehydrogenase, cytosolic 1-like 2 20725361 20735178 - 30032202 116892672 MODEL JAAIVD010000001;XM_032894500 XP_032750391 protein-coding 625943815 LOC116911201 ornithine aminotransferase, mitochondrial-like 10 94780926 94782436 - 22301074;30032202 116911201 MODEL JAAIVD010000005;XM_032915074 XP_032770965 protein-coding 625943820 Phf19 PHD finger protein 19 ENCODES a protein that exhibits histone H3K36me3 reader activity (ortholog); histone H3K4me3 reader activity (ortholog); INVOLVED IN epigenetic regulation of gene expression (ortholog); negative regulation of gene expression, epigenetic (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN ESC/E(Z) complex (ortholog) 5 736695 757969 + 30032202 116901106 MODEL JAAIVD010000023;XM_032902670;XM_032902671 XP_032758561;XP_032758562 protein-coding 625943842 Slc7a6os solute carrier family 7 member 6 opposite strand INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH Progressive Myoclonus Epilepsy 12 (ortholog) 17 25937743 25946255 - 30032202 116886208 MODEL JAAIVD010000011;XM_032887596 XP_032743487 probable RNA polymerase II nuclear localization protein SLC7A6OS protein-coding 625943851 Exoc7 exocyst complex component 7 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN positive regulation of mitotic cytokinetic process (ortholog); protein localization to ciliary membrane (ortholog); protein transmembrane transport (ortholog); PARTICIPATES IN insulin signaling pathway; ASSOCIATED WITH genetic disease (ortholog); NEURODEVELOPMENTAL DISORDER WITH SEIZURES AND BRAIN ATROPHY (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); centriolar satellite (ortholog); ciliary basal body (ortholog) 9 67764899 67783371 + 22301074;30032202 116908696 MODEL JAAIVD010000002;XM_032912016;XM_032912017;XM_032912018;XM_032912019;XM_032912020 XP_032767907;XP_032767908;XP_032767909;XP_032767910;XP_032767911 protein-coding 625943881 Pdzd9 PDZ domain containing 9 2 81129078 81137102 + 22301074 116891583 MODEL JAAIVD010000001;XM_032892762 XP_032748653 PDZ domain-containing protein 9 protein-coding 625943888 Trnap-agg transfer RNA proline (anticodon AGG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 4 137225330 137225403 - 116899953 MODEL JAAIVD010000003 trna 625943889 Hhipl2 HHIP like 2 10 61670900 61690420 + 116911564 MODEL JAAIVD010000005;XM_032915554 XP_032771445 HHIP-like protein 2 protein-coding 625943901 LOC116903301 vomeronasal type-2 receptor 26-like 6 23696817 23732511 + 22301074;30032202 116903301 MODEL JAAIVD010000024;XM_032905725 XP_032761616 protein-coding 625943909 Lim2 lens intrinsic membrane protein 2 INVOLVED IN camera-type eye development (ortholog); lens development in camera-type eye (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); cataract (ortholog); cataract 19 multiple types (ortholog); FOUND IN vesicle (ortholog) 2 156042126 156048914 - 22301074;30032202 116894368 MODEL JAAIVD010000001;XM_032896073 XP_032751964 lens fiber membrane intrinsic protein protein-coding 625943918 Trnas-gcu transfer RNA serine (anticodon GCU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 5 97219317 97219398 - 116902673 MODEL JAAIVD010000023 trna 625943919 Trnal-aag transfer RNA leucine (anticodon AAG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 12 72250758 72250839 - 116914214 MODEL JAAIVD010000007 trna 625943920 Cfap221 cilia and flagella associated protein 221 ENCODES a protein that exhibits calmodulin binding (ortholog); INVOLVED IN cerebrospinal fluid circulation (ortholog); cilium assembly (ortholog); motile cilium assembly (ortholog); ASSOCIATED WITH primary ciliary dyskinesia (ortholog); primary ciliary dyskinesia 55 (ortholog); FOUND IN 9+2 motile cilium (ortholog); axoneme (ortholog); centriole (ortholog) 10 12491101 12567276 - 30032202 116911494 MODEL JAAIVD010000005;XM_032915478 XP_032771369 cilia- and flagella-associated protein 221 protein-coding 625943948 Tmem107 transmembrane protein 107 INVOLVED IN cilium assembly (ortholog); cilium organization (ortholog); craniofacial suture morphogenesis (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Gitelman syndrome (ortholog); Meckel syndrome 13 (ortholog); FOUND IN ciliary transition zone (ortholog); MKS complex (ortholog) 9 48665797 48667954 + 30032202 116910118 MODEL JAAIVD010000002;XM_032913949;XM_032913950;XM_032913951 XP_032769840;XP_032769841;XP_032769842 protein-coding 625943964 LOC116910040 uncharacterized LOC116910040 9 55109828 55113249 - 116910040 MODEL JAAIVD010000002;XR_004389123 ncrna 625943968 Mtrf1l mitochondrial translation release factor 1 like ENCODES a protein that exhibits translation release factor activity (ortholog); translation release factor activity, codon specific (ortholog); INVOLVED IN mitochondrial translational termination (ortholog); FOUND IN mitochondrion (ortholog) 2 197046739 197056814 + 22301074 116892874 MODEL JAAIVD010000001;XM_032894781;XM_032894782;XR_004386983 XP_032750672;XP_032750673 mitochondrial translational release factor 1 like;peptide chain release factor 1-like, mitochondrial protein-coding 625943987 LOC116910740 U1 spliceosomal RNA 9 72933553 72933690 + 116910740 MODEL JAAIVD010000002 pseudo 625943988 Snx12 sorting nexin 12 ENCODES a protein that exhibits enzyme binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN negative regulation of early endosome to late endosome transport (ortholog); negative regulation of gene expression (ortholog); negative regulation of protein catabolic process (ortholog); FOUND IN early endosome (ortholog) X 59317431 59431899 + 30032202 116889386 MODEL JAAIVD010000014;XM_032890487 XP_032746378 sorting nexin-12 protein-coding 625943997 LOC116906913 olfactory receptor 145-like 8 32328658 32329596 + 22301074;30032202 116906913 MODEL JAAIVD010000027;XM_032909833 XP_032765724 protein-coding 625944001 LOC116905583 zinc finger HIT domain-containing protein 1-like 7 1111171 1111679 + 116905583 MODEL JAAIVD010000026 pseudo 625944002 Taar5 trace amine associated receptor 5 ENCODES a protein that exhibits trace-amine receptor activity (ortholog); trimethylamine receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cognition (ortholog); sensory perception of chemical stimulus (ortholog); FOUND IN plasma membrane (ortholog) 2 210033193 210034206 + 22301074;30032202 116894667 MODEL JAAIVD010000001;XM_032896370 XP_032752261 trace amine-associated receptor 5 protein-coding 625944005 LOC116904346 cactin-like 6 71982359 72009326 - 116904346 MODEL JAAIVD010000024 pseudo 625944006 Senp3 SUMO specific peptidase 3 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); cysteine-type peptidase activity (ortholog); deSUMOylase activity (ortholog); INVOLVED IN negative regulation of double-strand break repair via homologous recombination (ortholog); protein desumoylation (ortholog); FOUND IN MLL1 complex (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 9 49284376 49293260 - 30032202 116910473 MODEL JAAIVD010000002;XM_032914345;XM_032914347 XP_032770236;XP_032770238 sentrin-specific protease 3 protein-coding 625944026 LOC116909606 olfactory receptor 1361-like 9 33633360 33634283 + 22301074;30032202 116909606 MODEL JAAIVD010000002;XM_032913228 XP_032769119 protein-coding 625944029 Pan2 poly(A) specific ribonuclease subunit PAN2 ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); poly(A)-specific ribonuclease activity (ortholog); INVOLVED IN nuclear-transcribed mRNA poly(A) tail shortening (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); FOUND IN P-body (ortholog); PAN complex (ortholog) 1 155772673 155791148 + 22301074;30032202 116905979 MODEL JAAIVD010000025;XM_032908994 XP_032764885 PAN2-PAN3 deadenylation complex catalytic subunit PAN2 protein-coding 625944059 LOC116909230 sperm motility kinase 4A-like 9 9575157 9576596 + 22301074;30032202 116909230 MODEL JAAIVD010000002;XM_032912733 XP_032768624 protein-coding 625944062 LOC116887534 olfactory receptor 2J3-like 18 11062893 11063828 + 22301074 116887534 MODEL JAAIVD010000013;XM_032889164 XP_032745055 protein-coding 625944065 LOC116886679 ras-related protein Rab-5A 17 14696758 14698569 + 22301074 116886679 MODEL JAAIVD010000011;XM_032888170 XP_032744061 protein-coding 625944070 LOC116902529 small nucleolar RNA SNORD113/SNORD114 family 5 30497726 30497806 - 116902529 MODEL JAAIVD010000023 pseudo 625944071 LOC116888628 L-lactate dehydrogenase A chain-like X 89050715 89051694 + 116888628 MODEL JAAIVD010000014 pseudo 625944072 Avil advillin ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); Arp2/3 complex binding (ortholog); INVOLVED IN actin filament organization (ortholog); cilium assembly (ortholog); nervous system development (ortholog); ASSOCIATED WITH nephrotic syndrome (ortholog); nephrotic syndrome type 2 (ortholog); nephrotic syndrome type 21 (ortholog); FOUND IN actin filament (ortholog); focal adhesion (ortholog); lamellipodium (ortholog) 1 205432480 205451672 + 22301074;30032202 116909749 MODEL JAAIVD010000025;XM_032913434 XP_032769325 protein-coding 625944096 Tmem108 transmembrane protein 108 INVOLVED IN cellular response to brain-derived neurotrophic factor stimulus (ortholog); dendrite extension (ortholog); dentate gyrus development (ortholog); FOUND IN axon (ortholog); early endosome (ortholog); endosome membrane (ortholog) 8 94782438 95063244 - 30032202 116907420 MODEL JAAIVD010000027;XM_032910380;XM_032910381;XM_032910382;XM_032910383;XM_032910384;XM_032910386 XP_032766271;XP_032766272;XP_032766273;XP_032766274;XP_032766275;XP_032766277 protein-coding 625944117 LOC116892248 meiosis regulator and mRNA stability factor 1-like 2 160311271 160314813 - 116892248 MODEL JAAIVD010000001;XM_032893818 XP_032749709 protein-coding 625944124 LOC116904411 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like 6 98898486 98898827 + 116904411 MODEL JAAIVD010000024 pseudo 625944125 LOC116898230 PCNA-associated factor-like 4 148253726 148255118 + 116898230 MODEL JAAIVD010000003 pseudo 625944126 LOC116883414 histone H2A type 4 14 42942929 42943539 + 22301074;30032202 116883414 MODEL JAAIVD010000009;XM_032884542 XP_032740433 protein-coding 625944131 LOC116895350 pancreatic alpha-amylase-like 3 46167585 46176292 + 22301074 116895350 MODEL JAAIVD010000012;XM_032896649;XM_032896650;XM_032896651 XP_032752540;XP_032752541;XP_032752542 alpha-amylase 1-like protein-coding 625944146 LOC116890419 U7 small nuclear RNA 1 124883448 124883510 - 116890419 MODEL JAAIVD010000025;XR_004386619 snrna 625944149 Ror2 receptor tyrosine kinase like orphan receptor 2 ENCODES a protein that exhibits frizzled binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); Wnt-protein binding (ortholog); INVOLVED IN astrocyte development (ortholog); BMP signaling pathway (ortholog); bone mineralization (ortholog); PARTICIPATES IN Wnt signaling, non-canonical pathway; ASSOCIATED WITH autosomal dominant Robinow syndrome 1 (ortholog); autosomal recessive Robinow syndrome (ortholog); brachydactyly (ortholog); FOUND IN cell surface (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) 14 71417974 71589915 - 22301074;30032202 116883462 MODEL JAAIVD010000009;XM_032884611 XP_032740502 tyrosine-protein kinase transmembrane receptor ROR2 protein-coding 625944162 LOC116907678 olfactory receptor 145-like 8 31811458 31812402 + 22301074;30032202 116907678 MODEL JAAIVD010000027;XM_032910773 XP_032766664 protein-coding 625944165 LOC116884867 protocadherin beta-18 15 1120510 1125166 + 22301074 116884867 MODEL JAAIVD010000010;XM_032886106 XP_032741997 protein-coding 625944170 LOC116889409 melanoma-associated antigen B3-like X 45159686 45160681 - 30032202 116889409 MODEL JAAIVD010000014;XM_032890512 XP_032746403 protein-coding 625944173 Cdk15 cyclin dependent kinase 15 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); PARTICIPATES IN Wnt signaling pathway 4 133151976 133243016 - 22301074;30032202 116898187 MODEL JAAIVD010000003;XM_032899549;XM_032899550;XM_032899551 XP_032755440;XP_032755441;XP_032755442 cyclin-dependent kinase 15 protein-coding 625944194 LOC116898453 heterogeneous nuclear ribonucleoprotein A3-like 4 98448204 98537643 + 116898453 MODEL JAAIVD010000003 pseudo 625944195 Lyrm1 LYR motif containing 1 FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) 2 81761351 81782699 - 30032202 116891592 MODEL JAAIVD010000001;XM_032892778;XM_032892779;XM_032892780;XM_032892781;XM_032892782;XM_032892783;XM_032892784 XP_032748669;XP_032748670;XP_032748671;XP_032748672;XP_032748673;XP_032748674;XP_032748675 LYR motif-containing protein 1 protein-coding 625944223 LOC116889425 U6 spliceosomal RNA X 110075794 110075897 + 116889425 MODEL JAAIVD010000014;XR_004386390 snrna 625944226 LOC116894375 vomeronasal type-2 receptor 116-like 2 156526700 156547777 - 22301074;30032202 116894375 MODEL JAAIVD010000001;XM_032896082;XM_032896083;XM_032896084 XP_032751973;XP_032751974;XP_032751975 protein-coding 625944240 Fastkd2 FAST kinase domains 2 ENCODES a protein that exhibits rRNA binding (ortholog); INVOLVED IN apoptotic process (ortholog); mitochondrial large ribosomal subunit assembly (ortholog); mitochondrial RNA modification (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 44 (ortholog); cytochrome-c oxidase deficiency disease (ortholog); genetic disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog); mitochondrion (ortholog) 4 137690640 137710033 + 22301074;30032202 116899448 MODEL JAAIVD010000003;XM_032901219 XP_032757110 FAST kinase domain-containing protein 2, mitochondrial protein-coding 625944256 Mrtfb myocardin related transcription factor B ENCODES a protein that exhibits actin binding (ortholog); DNA-binding transcription factor activity (ortholog); transcription coactivator activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); blood vessel morphogenesis (ortholog); cardiac muscle tissue development (ortholog); ASSOCIATED WITH pervasive developmental disorder (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); nuclear speck (ortholog) 9 8318571 8474300 + 30032202 116908874 MODEL JAAIVD010000002;XM_032912318;XM_032912319 XP_032768209;XP_032768210 myocardin-related transcription factor B protein-coding 625944281 Gldn gliomedin ENCODES a protein that exhibits protein binding involved in heterotypic cell-cell adhesion (ortholog); INVOLVED IN clustering of voltage-gated sodium channels (ortholog); microvillus organization (ortholog); ASSOCIATED WITH aromatase excess syndrome (ortholog); Contracture (ortholog); COVID-19 (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); plasma membrane (ortholog) 8 48361595 48404329 + 30032202 116906926 MODEL JAAIVD010000027;XM_032909853 XP_032765744 protein-coding 625944295 LOC116910931 peptidyl-prolyl cis-trans isomerase NIMA-interacting 4-like 10 61628419 61628894 + 116910931 MODEL JAAIVD010000005 pseudo 625944296 Rap1b RAP1B, member of RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cell population proliferation (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; platelet-derived growth factor signaling pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); Thrombocytopenia 11 (ortholog); FOUND IN cell-cell junction (ortholog); cytosol (ortholog); dense core granule (ortholog) 1 195922653 195955305 - 22301074;30032202 116909339 MODEL JAAIVD010000025;XM_032912891;XM_032912896 XP_032768782;XP_032768787 ras-related protein Rap-1b protein-coding 625944311 Sec24b SEC24 homolog B, COPII component ENCODES a protein that exhibits zinc ion binding (ortholog); INVOLVED IN aorta morphogenesis (ortholog); auditory receptor cell morphogenesis (ortholog); auditory receptor cell stereocilium organization (ortholog); FOUND IN COPII vesicle coat (ortholog); COPII-coated ER to Golgi transport vesicle (ortholog); cytosol (ortholog) 3 29242452 29312013 + 22301074;30032202 116896258 MODEL JAAIVD010000012;XM_032897333 XP_032753224 SEC24 homolog B, COPII coat complex component;protein transport protein Sec24B protein-coding 625944339 Trnap-agg transfer RNA proline (anticodon AGG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 97088978 97089049 - 116895146 MODEL JAAIVD010000001 trna 625944340 LOC116902091 sperm motility kinase-like 5 129872523 129873350 - 22301074;30032202 116902091 MODEL JAAIVD010000023;XM_032904389 XP_032760280 protein-coding 625944346 Dctn4 dynactin subunit 4 INVOLVED IN dynein-driven meiotic oscillatory nuclear movement (ortholog); microtubule-based process (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH cystic fibrosis (ortholog); Pseudomonas Infections (ortholog); FOUND IN centrosome (ortholog); cytoplasmic dynein complex (ortholog); focal adhesion (ortholog) 15 71390234 71416519 - 22301074;30032202 116884437 MODEL JAAIVD010000010;XM_032885527;XM_032885528 XP_032741418;XP_032741419 protein-coding 625944365 LOC116913552 dual specificity protein phosphatase 13 12 91513132 91522400 - 22301074;30032202 116913552 MODEL JAAIVD010000007;XM_032917758;XM_032917759 XP_032773649;XP_032773650 protein-coding 625944375 LOC116894965 small nucleolar RNA SNORA36 family 2 73210103 73210233 + 116894965 MODEL JAAIVD010000001;XR_004387158 snorna 625944378 LOC116893771 elongation factor 1-beta-like 2 30123775 30124515 + 22301074;30032202 116893771 MODEL JAAIVD010000001;XM_032895472 XP_032751363 protein-coding 625944383 Morc3 MORC family CW-type zinc finger 3 ENCODES a protein that exhibits DNA binding (ortholog); histone H3K4me3 reader activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); maintenance of protein location in nucleus (ortholog); negative regulation of fibroblast proliferation (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 4 50771189 50814114 - 22301074;30032202 116898971 MODEL JAAIVD010000003;XM_032900394;XM_032900395 XP_032756285;XP_032756286 MORC family CW-type zinc finger protein 3 protein-coding 625944407 LOC116900739 brain protein I3 5 142438303 142439027 - 116900739 MODEL JAAIVD010000023;XM_032902444 XP_032758335 protein-coding 625944412 LOC116883192 translation initiation factor IF-2-like 14 36759654 36762954 - 116883192 MODEL JAAIVD010000009;XM_032884227 XP_032740118 protein-coding 625944418 LOC116886383 heat shock protein HSP 90-beta-like 17 22946554 22948714 - 116886383 MODEL JAAIVD010000011 pseudo 625944419 LOC116899400 uncharacterized LOC116899400 4 131819875 131876738 - 116899400 MODEL JAAIVD010000003;XR_004387728 ncrna 625944424 LOC116908337 U6 spliceosomal RNA 8 39310499 39310601 - 116908337 MODEL JAAIVD010000027;XR_004388890 snrna 625944427 Atp5f1e ATP synthase F1 subunit epsilon ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); protein-containing complex binding (ortholog); proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN proton motive force-driven mitochondrial ATP synthesis (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH Fluoride Poisoning (ortholog); mitochondrial complex V (ATP synthase) deficiency nuclear type 3 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) 5 143515096 143518061 + 22301074;30032202 116902265 MODEL JAAIVD010000023;XM_032904684 XP_032760575 ATP synthase subunit epsilon, mitochondrial protein-coding 625944434 Grxcr2 glutaredoxin and cysteine rich domain containing 2 INVOLVED IN auditory receptor cell stereocilium organization (ortholog); inner ear receptor cell stereocilium organization (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 101 (ortholog); Hearing Loss (ortholog); FOUND IN microvillus (ortholog); stereocilium base (ortholog); stereocilium shaft (ortholog) 15 3164544 3178080 - 30032202 116884631 MODEL JAAIVD010000010;XM_032885772 XP_032741663 glutaredoxin domain-containing cysteine-rich protein 2 protein-coding 625944440 Ndufa5 NADH:ubiquinone oxidoreductase subunit A5 INVOLVED IN respiratory electron transport chain (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Facial Nerve Injuries (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) 6 114804061 114814033 + 22301074;30032202 116904034 MODEL JAAIVD010000024;XM_032906869 XP_032762760 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 protein-coding 625944449 LOC116903051 uncharacterized LOC116903051 6 769021 769780 + 30032202 116903051 MODEL JAAIVD010000024;XM_032905351 XP_032761242 uncharacterized protein LOC116903051 protein-coding 625944453 LOC116898394 geminin-like 4 77463727 77464386 + 116898394 MODEL JAAIVD010000003 pseudo 625944454 LOC116914902 transcription factor BTF3-like 13 65067210 65067697 + 116914902 MODEL JAAIVD010000008 pseudo 625944455 Bco2 beta-carotene oxygenase 2 ENCODES a protein that exhibits beta,beta-carotene-9',10'-cleaving oxygenase activity (ortholog); oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (ortholog); INVOLVED IN carotene catabolic process (ortholog); carotene metabolic process (ortholog); carotenoid metabolic process (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog) 8 45003727 45029432 - 30032202 116906727 MODEL JAAIVD010000027;XM_032909537;XM_032909538 XP_032765428;XP_032765429 beta,beta-carotene 9',10'-oxygenase protein-coding 625944474 Zdhhc18 zDHHC palmitoyltransferase 18 ENCODES a protein that exhibits palmitoyltransferase activity (ortholog); protein-cysteine S-palmitoyltransferase activity (ortholog); INVOLVED IN intracellular protein localization (ortholog); negative regulation of cGAS/STING signaling pathway (ortholog); negative regulation of innate immune response (ortholog); FOUND IN Golgi apparatus (ortholog) 1 24597514 24623868 + 30032202 116895081 MODEL JAAIVD010000025;XM_032896517 XP_032752408 palmitoyltransferase ZDHHC18;zinc finger DHHC-type palmitoyltransferase 18 protein-coding 625944486 LOC116903739 40S ribosomal protein S17-like 6 14320988 14321394 + 116903739 MODEL JAAIVD010000024 pseudo 625944487 LOC116897517 small nucleolar RNA SNORA48 3 170245930 170246060 - 116897517 MODEL JAAIVD010000012 pseudo 625944488 LOC116891978 insulin-like growth factor 1 receptor 2 132112614 132178416 - 22301074;30032202 116891978 MODEL JAAIVD010000001;XM_032893421 XP_032749312 protein-coding 625944511 LOC116889168 cilia- and flagella-associated protein 47-like X 79505887 79541974 - 116889168 MODEL JAAIVD010000014;XM_032890334 XP_032746225 protein-coding 625944521 LOC116906072 Ig heavy chain V region 108A-like 7 62663597 62664047 - 116906072 MODEL JAAIVD010000026 pseudo 625944522 LOC116897321 60S acidic ribosomal protein P0-like 3 211699094 211699929 + 116897321 MODEL JAAIVD010000012 pseudo 625944523 Slc10a4 solute carrier family 10 member 4 ENCODES a protein that exhibits bile acid:sodium symporter activity (ortholog); INVOLVED IN adult behavior (ortholog); regulation of neurotransmitter loading into synaptic vesicle (ortholog); response to xenobiotic stimulus (ortholog); FOUND IN cholinergic synapse (ortholog); dopaminergic synapse (ortholog); plasma membrane (ortholog) 11 29817231 29823262 + 22301074;30032202 116912724 MODEL JAAIVD010000006;XM_032916856 XP_032772747 sodium/bile acid cotransporter 4 protein-coding 625944530 LOC116887971 E3 ubiquitin-protein ligase RLIM X 66538912 66541898 - 30032202 116887971 MODEL JAAIVD010000014;XM_032889410 XP_032745301 protein-coding 625944535 Tifab TIFA inhibitor ENCODES a protein that exhibits deubiquitinase activator activity (ortholog); ubiquitin-specific protease binding (ortholog); INVOLVED IN auditory behavior (ortholog); cochlea development (ortholog); cochlea morphogenesis (ortholog); FOUND IN cytoplasm (ortholog) 14 81898205 81899672 + 22301074;30032202 116883457 MODEL JAAIVD010000009;XM_032884604 XP_032740495 TRAF-interacting protein with FHA domain-containing protein B protein-coding 625944541 LOC116884819 60S ribosomal protein L36a-like 15 33833825 33834138 - 116884819 MODEL JAAIVD010000010 pseudo 625944542 LOC116913351 olfactory receptor 11H4-like 12 71079705 71080691 - 22301074 116913351 MODEL JAAIVD010000007;XM_032917507 XP_032773398 protein-coding 625944545 LOC116900259 olfactory receptor 1020 5 63169514 63170467 + 22301074;30032202 116900259 MODEL JAAIVD010000023;XM_032902010 XP_032757901 protein-coding 625944548 LOC116884373 cellular tumor antigen p53-like 15 44941288 44942496 + 116884373 MODEL JAAIVD010000010 pseudo 625944549 LOC116890366 U6 spliceosomal RNA 1 262766246 262766349 + 116890366 MODEL JAAIVD010000025;XR_004386584 snrna 625944552 LOC116907282 protein PTHB1-like 8 16811805 16856767 - 30032202 116907282 MODEL JAAIVD010000027;XM_032910234 XP_032766125 protein-coding 625944558 LOC116901691 uncharacterized LOC116901691 5 81616275 81619439 - 116901691 MODEL JAAIVD010000023;XR_004388010 ncrna 625944564 LOC116895985 60S ribosomal protein L6-like 3 163208539 163234654 + 22301074 116895985 MODEL JAAIVD010000012;XM_032897018 XP_032752909 protein-coding 625944569 LOC116896922 THUMP domain-containing protein 1-like 3 117047101 117048217 + 116896922 MODEL JAAIVD010000012 pseudo 625944570 Pald1 phosphatase domain containing paladin 1 FOUND IN cytosol (ortholog) 18 27156546 27220504 - 116887379 MODEL JAAIVD010000013;XM_032888974 XP_032744865 paladin protein-coding 625944594 Ubtd2 ubiquitin domain containing 2 9 5294539 5360265 + 22301074 116908711 MODEL JAAIVD010000002;XM_032912049 XP_032767940 ubiquitin domain-containing protein 2 protein-coding 625944601 LOC116890576 DNA-(apurinic or apyrimidinic site) lyase-like 1 272944695 272945627 - 116890576 MODEL JAAIVD010000025 pseudo 625944602 Synj2 synaptojanin 2 ENCODES a protein that exhibits inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity (ortholog); inositol-1,4,5-trisphosphate 5-phosphatase activity (ortholog); PDZ domain binding (ortholog); INVOLVED IN clathrin coat assembly (ortholog); inositol phosphate catabolic process (ortholog); phosphatidylinositol dephosphorylation (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Meniere's disease (ortholog); FOUND IN axon terminus (ortholog); cytoplasmic microtubule (ortholog); presynapse (ortholog) 2 192777744 192876158 - 22301074;30032202 116892854 MODEL JAAIVD010000001;XM_032894748;XM_032894749 XP_032750639;XP_032750640 synaptojanin-2 protein-coding 625944639 Macf1 microtubule actin crosslinking factor 1 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN cell migration (ortholog); establishment or maintenance of cell polarity (ortholog); Golgi to plasma membrane protein transport (ortholog); ASSOCIATED WITH cerebellar hypoplasia (ortholog); Developmental Disabilities (ortholog); Dwarfism (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); Golgi apparatus (ortholog) 1 34593741 34916988 + 22301074;30032202 116896994 MODEL JAAIVD010000025;XM_032898600 XP_032754491 microtubule-actin cross-linking factor 1 protein-coding 625944737 Alkbh7 alkB homolog 7, RNA demethylase ENCODES a protein that exhibits oxidative RNA demethylase activity (ortholog); tRNA demethylase activity (ortholog); INVOLVED IN oxidative RNA demethylation (ortholog); regulation of lipid storage (ortholog); regulation of mitochondrial membrane permeability involved in programmed necrotic cell death (ortholog); FOUND IN mitochondrion (ortholog) 4 88378362 88380249 + 30032202 116899204 A0A8A1UBN0 MODEL JAAIVD010000003;XM_032900793 XP_032756684 alkB homolog 7;alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial APPROVED protein-coding 625944745 Mrpl1 mitochondrial ribosomal protein L1 FOUND IN mitochondrion (ortholog) 11 7982680 8038383 - 22301074 116912271 MODEL JAAIVD010000006;XM_032916260 XP_032772151 39S ribosomal protein L1, mitochondrial protein-coding 625944758 LOC116904267 GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like 6 39716862 39720156 - 116904267 MODEL JAAIVD010000024 pseudo 625944759 Cav1 caveolin 1 ENCODES a protein that exhibits ATPase binding (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN angiogenesis (ortholog); angiotensin-activated signaling pathway (ortholog); animal organ regeneration (ortholog); PARTICIPATES IN insulin signaling pathway; platelet-derived growth factor signaling pathway; reverse cholesterol transport pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acoustic neuroma (ortholog); Acute Lung Injury (ortholog); FOUND IN acrosomal membrane (ortholog); apical plasma membrane (ortholog); basal plasma membrane (ortholog) 6 121625973 121658196 - 22301074;30032202 116904061 MODEL JAAIVD010000024;XM_032906921;XM_032906922 XP_032762812;XP_032762813 caveolin-1 protein-coding 625944769 LOC116895175 poly(rC)-binding protein 2-like 3 89506673 89507419 - 116895175 MODEL JAAIVD010000012 pseudo 625944770 LOC116904351 developmental pluripotency-associated protein 2-like 6 75027461 75029789 - 116904351 MODEL JAAIVD010000024 pseudo 625944771 LOC116894561 vomeronasal type-1 receptor 1-like 2 178433228 178434181 + 116894561 MODEL JAAIVD010000001 pseudo 625944772 LOC116912867 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1 11 93917474 93919919 - 22301074;30032202 116912867 MODEL JAAIVD010000006;XM_032917085 XP_032772976 protein-coding 625944777 LOC116892819 60S ribosomal protein L19-like 2 190297043 190297702 - 116892819 MODEL JAAIVD010000001 pseudo 625944778 LOC116895483 arylacetamide deacetylase-like 2 3 95228928 95258213 - 22301074 116895483 MODEL JAAIVD010000012;XM_032896744 XP_032752635 protein-coding 625944786 LOC116888917 40S ribosomal protein S9-like X 94118645 94119231 - 116888917 MODEL JAAIVD010000014 pseudo 625944787 LOC116885102 small nucleolar RNA SNORA62/SNORA6 family 15 11567222 11567377 + 116885102 MODEL JAAIVD010000010;XR_004385968 snorna 625944790 Taf5 TATA-box binding protein associated factor 5 ENCODES a protein that exhibits DNA binding (ortholog); identical protein binding (ortholog); promoter-specific chromatin binding (ortholog); INVOLVED IN DNA-templated transcription initiation (ortholog); mRNA transcription by RNA polymerase II (ortholog); positive regulation of transcription initiation by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN chromatin (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 2 46600808 46616695 + 22301074;30032202 116891261 MODEL JAAIVD010000001;XM_032892146 XP_032748037 transcription initiation factor TFIID subunit 5 protein-coding 625944805 LOC116904695 U1 spliceosomal RNA 6 74039070 74039225 - 116904695 MODEL JAAIVD010000024;XR_004388391 snrna 625944808 LOC116889728 elongation factor P-like 22301074;30032202 116889728 MODEL JAAIVD010000065;XM_032890603 XP_032746494 protein-coding 625944809 Acsl5 acyl-CoA synthetase long chain family member 5 ENCODES a protein that exhibits arachidonate-CoA ligase activity (ortholog); long-chain fatty acid-CoA ligase activity (ortholog); oleoyl-CoA ligase activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); fatty acid transport (ortholog); long-chain fatty acid metabolic process (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH Diarrhea 13 (ortholog); Experimental Arthritis (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrion (ortholog); plasma membrane (ortholog) 2 60864899 60907301 - 30032202 116891344 MODEL JAAIVD010000001;XM_032892336 XP_032748227 long-chain-fatty-acid--CoA ligase 5 protein-coding 625944835 Exoc5 exocyst complex component 5 ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN apoptotic process (ortholog); establishment of planar polarity (ortholog); kidney development (ortholog); PARTICIPATES IN insulin signaling pathway; ASSOCIATED WITH obstructive nephropathy (ortholog); FOUND IN ciliary base (ortholog) 12 73985132 74031698 + 30032202 116913881 MODEL JAAIVD010000007;XM_032918169 XP_032774060 protein-coding 625944857 LOC116884281 protocadherin-3-like 15 940419 943664 + 22301074 116884281 MODEL JAAIVD010000010;XM_032885364 XP_032741255 protein-coding 625944862 LOC116910272 retinol dehydrogenase 7-like 1 206207503 206210440 + 116910272 MODEL JAAIVD010000025;XM_032914153 XP_032770044 protein-coding 625944869 LOC116904253 DAZ-associated protein 2-like 6 28911366 28994693 + 116904253 MODEL JAAIVD010000024 pseudo 625944870 LOC116888512 uncharacterized LOC116888512 X 36707306 36708540 - 116888512 MODEL JAAIVD010000014 pseudo 625944871 Spata2l spermatogenesis associated 2 like ASSOCIATED WITH Fanconi anemia (ortholog) 17 42839935 42844132 - 30032202 116886129 MODEL JAAIVD010000011;XM_032887470 XP_032743361 spermatogenesis-associated protein 2-like protein protein-coding 625944878 LOC116886988 sperm motility kinase X-like 18 48913547 48954625 - 116886988 MODEL JAAIVD010000013 pseudo 625944879 LOC116906081 ADP-ribosylation factor-like protein 1 7 64966501 64972035 - 116906081 MODEL JAAIVD010000026 pseudo 625944880 Tspan9 tetraspanin 9 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN collagen-activated tyrosine kinase receptor signaling pathway (ortholog); mitocytosis (ortholog); neutrophil homeostasis (ortholog); FOUND IN extracellular matrix (ortholog); membrane (ortholog); migrasome (ortholog) 6 19761734 19942461 + 22301074;30032202 116903229 MODEL JAAIVD010000024;XM_032905601;XM_032905602;XM_032905603;XM_032905605;XM_032905606 XP_032761492;XP_032761493;XP_032761494;XP_032761496;XP_032761497 tetraspanin-9 protein-coding 625944904 LOC116895284 protein transport protein Sec61 subunit beta-like 3 10417618 10417908 - 116895284 MODEL JAAIVD010000012 pseudo 625944905 LOC116913562 40S ribosomal protein S19-like 12 78230239 78230721 + 22301074;30032202 116913562 MODEL JAAIVD010000007;XM_032917773;XM_032917774 XP_032773664;XP_032773665 protein-coding 625944913 Polr3d RNA polymerase III subunit D ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN positive regulation of innate immune response (ortholog); positive regulation of interferon-beta production (ortholog); termination of RNA polymerase III transcription (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; FOUND IN nucleoplasm (ortholog); RNA polymerase III complex (ortholog) 12 53911334 53916110 + 22301074;30032202 116913708 MODEL JAAIVD010000007;XM_032918004;XM_032918005 XP_032773895;XP_032773896 DNA-directed RNA polymerase III subunit RPC4 protein-coding 625944930 Sorbs2 sorbin and SH3 domain containing 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); cell growth involved in cardiac muscle cell development (ortholog); Notch signaling pathway (ortholog); ASSOCIATED WITH Weight Gain (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog); plasma membrane (ortholog) 13 42053330 42142010 - 22301074;30032202 116914285 MODEL JAAIVD010000008;XM_032918510;XM_032918511;XM_032918512;XM_032918513;XM_032918514;XM_032918515;XM_032918516 XP_032774401;XP_032774402;XP_032774403;XP_032774404;XP_032774405;XP_032774406;XP_032774407 sorbin and SH3 domain-containing protein 2 protein-coding 625944971 Trnat-agu transfer RNA threonine (anticodon AGU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 48709806 48709879 + 116910803 MODEL JAAIVD010000002 trna 625944972 LOC116913524 uncharacterized LOC116913524 12 20899140 20902296 - 116913524 MODEL JAAIVD010000007;XR_004389627 ncrna 625944977 Spns1 SPNS lysolipid transporter 1, lysophospholipid ENCODES a protein that exhibits lysophospholipid:sodium symporter activity (ortholog); INVOLVED IN lysophospholipid transport (ortholog); obsolete regulation of lysosomal lumen pH (ortholog); phospholipid efflux (ortholog); ASSOCIATED WITH pneumoconiosis (ortholog); FOUND IN lysosome (ortholog) 2 75557083 75564438 + 22301074;30032202 116891529 MODEL JAAIVD010000001;XM_032892678 XP_032748569 protein spinster homolog 1;sphingolipid transporter 1 (putative) protein-coding 625944993 Mixl1 Mix paired-like homeobox ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cell migration involved in gastrulation (ortholog); digestive tract development (ortholog); endoderm development (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) 10 59017923 59020200 - 30032202 116911790 MODEL JAAIVD010000005;XM_032915784;XM_032915785 XP_032771675;XP_032771676 homeobox protein MIXL1 protein-coding 625944999 Tap1 transporter 1, ATP binding cassette subfamily B member ENCODES a protein that exhibits ABC-type peptide antigen transporter activity (ortholog); ADP binding (ortholog); ATP binding (ortholog); INVOLVED IN antigen processing and presentation of endogenous peptide antigen via MHC class I (ortholog); cytosol to endoplasmic reticulum transport (ortholog); defense response (ortholog); ASSOCIATED WITH allergic disease (ortholog); ankylosing spondylitis (ortholog); asthma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) 18 8088841 8139516 - 22301074;30032202 116887405 MODEL JAAIVD010000013;XM_032889000 XP_032744891 antigen peptide transporter 1 protein-coding 625945014 Scap SREBF chaperone ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN cholesterol metabolic process (ortholog); immune response (ortholog); lipid metabolic process (ortholog); PARTICIPATES IN sterol regulatory element-binding protein signaling pathway; ASSOCIATED WITH end stage renal disease (ortholog); Experimental Diabetes Mellitus (ortholog); hepatocellular carcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi membrane (ortholog); protein-containing complex (ortholog) 8 100917024 100971073 + 22301074;30032202 116907667 MODEL JAAIVD010000027;XM_032910760;XM_032910761 XP_032766651;XP_032766652 sterol regulatory element-binding protein cleavage-activating protein protein-coding 625945043 LOC116903327 cat eye syndrome critical region protein 2 homolog ENCODES a protein that exhibits ATP-dependent chromatin remodeler activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); cochlea development (ortholog); execution phase of apoptosis (ortholog); ASSOCIATED WITH anencephaly (ortholog); neural tube defect (ortholog); FOUND IN CERF complex (ortholog); euchromatin (ortholog); ISWI-type complex (ortholog) 6 25974461 26086913 - 22301074;30032202 116903327 MODEL JAAIVD010000024;XM_032905768;XM_032905769;XM_032905770 XP_032761659;XP_032761660;XP_032761661 protein-coding 625945069 LOC116894139 olfactory receptor 56A3 2 104030881 104031828 + 22301074 116894139 MODEL JAAIVD010000001;XM_032895857 XP_032751748 protein-coding 625945072 Gnpnat1 glucosamine-phosphate N-acetyltransferase 1 ENCODES a protein that exhibits glucosamine 6-phosphate N-acetyltransferase activity (ortholog); identical protein binding (ortholog); monosaccharide binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); glucosamine metabolic process (ortholog); liver development (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; amino sugar metabolic pathway; french type sialuria pathway; ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); RHIZOMELIC DYSPLASIA, AIN-NAZ TYPE (ortholog); FOUND IN endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog); late endosome (ortholog) 12 77642652 77653825 + 30032202 116914056 MODEL JAAIVD010000007;XM_032918340;XM_032918341 XP_032774231;XP_032774232 glucosamine 6-phosphate N-acetyltransferase protein-coding 625945085 Mlst8 MTOR associated protein MLST8 ENCODES a protein that exhibits protein serine/threonine kinase activator activity (ortholog); protein serine/threonine kinase activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN positive regulation of actin filament polymerization (ortholog); positive regulation of peptidyl-tyrosine phosphorylation (ortholog); positive regulation of TOR signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; FOUND IN cytoplasm (ortholog); TORC1 complex (ortholog); TORC2 complex (ortholog) 9 1758322 1764046 - 22301074;30032202 116910469 MODEL JAAIVD010000002;XM_032914341;XM_032914342 XP_032770232;XP_032770233 MTOR associated protein, LST8 homolog;target of rapamycin complex subunit LST8 protein-coding 625945101 LOC116894556 olfactory receptor 49-like 2 177901982 177902956 - 22301074;30032202 116894556 MODEL JAAIVD010000001;XM_032896265 XP_032752156 protein-coding 625945104 Eva1a eva-1 homolog A, regulator of programmed cell death INVOLVED IN apoptotic process (ortholog); autophagy (ortholog); cardiac left ventricle morphogenesis (ortholog) 6 64033381 64055017 - 116903651 MODEL JAAIVD010000024;XM_032906307 XP_032762198 protein eva-1 homolog A protein-coding 625945110 Zswim4 zinc finger SWIM-type containing 4 17 16055775 16081025 + 22301074;30032202 116886240 MODEL JAAIVD010000011;XM_032887651 XP_032743542 zinc finger SWIM domain-containing protein 4 protein-coding 625945128 Mfap3 microfibril associated protein 3 9 40698376 40712838 - 116908633 MODEL JAAIVD010000002;XM_032911887;XM_032911888 XP_032767778;XP_032767779 microfibril-associated glycoprotein 3 protein-coding 625945140 Hyal3 hyaluronidase 3 ENCODES a protein that exhibits hyaluronoglucuronidase activity (ortholog); hyalurononglucosaminidase activity (ortholog); virus receptor activity (ortholog); INVOLVED IN cartilage development (ortholog); cellular response to interleukin-1 (ortholog); cellular response to tumor necrosis factor (ortholog); FOUND IN acrosomal membrane (ortholog); acrosomal vesicle (ortholog); cytoplasmic vesicle (ortholog) 8 98898131 98903767 + 22301074;30032202 116907531 MODEL JAAIVD010000027;XM_032910546;XM_032910547 XP_032766437;XP_032766438 hyaluronidase-3 protein-coding 625945153 LOC116884278 protocadherin beta-4-like 15 970212 973858 + 22301074 116884278 MODEL JAAIVD010000010;XM_032885361 XP_032741252 protein-coding 625945158 LOC116904785 small nucleolar RNA SNORD93 6 153080700 153080770 + 116904785 MODEL JAAIVD010000024;XR_004388449 snorna 625945161 LOC116890314 U4 spliceosomal RNA 1 246489293 246489455 + 116890314 MODEL JAAIVD010000025 pseudo 625945162 LOC116900552 olfactory receptor 4K3-like 5 89861577 89862518 - 22301074 116900552 MODEL JAAIVD010000023;XM_032902278 XP_032758169 protein-coding 625945165 Prkce protein kinase C epsilon ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); actin monomer binding (ortholog); diacylglycerol-dependent, calcium-independent serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to ethanol (ortholog); cellular response to hypoxia (ortholog); cellular response to platelet-derived growth factor stimulus (ortholog); PARTICIPATES IN eicosanoid signaling pathway; endothelin signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH Cardiomegaly (ortholog); cardiomyopathy (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cell periphery (ortholog); cytoplasm (ortholog); cytosol (ortholog) 7 6320026 6806544 - 22301074 116905760 MODEL JAAIVD010000026;XM_032908730 XP_032764621 protein kinase C epsilon type protein-coding 625945184 Btk Bruton tyrosine kinase ENCODES a protein that exhibits identical protein binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); INVOLVED IN B cell affinity maturation (ortholog); B cell receptor signaling pathway (ortholog); cell maturation (ortholog); PARTICIPATES IN erythropoietin signaling pathway; FasL mediated signaling pathway; Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH Adenoviridae Infections (ortholog); agammaglobulinemia (ortholog); agammaglobulinemia 1 (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) X 86848108 86886678 - 22301074;30032202 116888485 MODEL JAAIVD010000014;XM_032889760 XP_032745651 tyrosine-protein kinase BTK protein-coding 625945207 LOC116907662 glyceraldehyde-3-phosphate dehydrogenase-like 1 157529326 157532301 + 116907662 MODEL JAAIVD010000025 pseudo 625945208 LOC116888937 actin-histidine N-methyltransferase-like X 1589812 1596038 - 116888937 MODEL JAAIVD010000014 pseudo 625945209 Satb2 SATB homeobox 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); histone deacetylase binding (ortholog); INVOLVED IN cartilage development (ortholog); chromatin remodeling (ortholog); embryonic pattern specification (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); cerebellar ataxia (ortholog); cleft palate (ortholog); FOUND IN histone deacetylase complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 4 131230727 131414564 - 30032202 116899398 MODEL JAAIVD010000003;XM_032901122;XM_032901123;XM_032901124;XM_032901125;XM_032901126;XM_032901128;XM_032901129 XP_032757013;XP_032757014;XP_032757015;XP_032757016;XP_032757017;XP_032757019;XP_032757020 DNA-binding protein SATB2 protein-coding 625945243 Gprasp3 G protein-coupled receptor associated sorting protein family member 3 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN learning or memory (ortholog); negative regulation of neuron apoptotic process (ortholog); positive regulation of dendritic spine morphogenesis (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) X 87606361 87611439 + 116888593 MODEL JAAIVD010000014;XM_032889892 XP_032745783 Bhlhb9 basic helix-loop-helix family member b9;protein BHLHb9 protein-coding 625945252 LOC116886723 5S ribosomal RNA 17 43148515 43148633 - 116886723 MODEL JAAIVD010000011;XR_004386135 rrna 625945255 Spmip6 sperm microtubule inner protein 6 INVOLVED IN flagellated sperm motility (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); manchette (ortholog) 1 4032064 4044996 + 30032202 116891353 MODEL JAAIVD010000025;XM_032892350;XM_032892358 XP_032748241;XP_032748249 C1H9orf24 chromosome 1 C9orf24 homolog;spermatid-specific manchette-related protein 1 protein-coding 625945272 Fuca1 alpha-L-fucosidase 1 ENCODES a protein that exhibits alpha-L-fucosidase activity (ortholog); carbohydrate binding (ortholog); fucosidase activity (ortholog); INVOLVED IN fucose metabolic process (ortholog); glycoside catabolic process (ortholog); ASSOCIATED WITH diabetes mellitus (ortholog); Diabetic Nephropathies (ortholog); diabetic retinopathy (ortholog) 1 22291051 22309016 - 22301074;30032202 116894501 MODEL JAAIVD010000025;XM_032896209 XP_032752100 tissue alpha-L-fucosidase protein-coding 625945284 LOC116906578 putative gustatory receptor clone PTE38 8 15848495 15849436 - 116906578 MODEL JAAIVD010000027 pseudo 625945285 Hs2st1 heparan sulfate 2-O-sulfotransferase 1 ENCODES a protein that exhibits heparan sulfate 2-sulfotransferase activity (ortholog); INVOLVED IN gene expression (ortholog); heparan sulfate proteoglycan biosynthetic process (ortholog); heparin proteoglycan metabolic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); NEUROFACIOSKELETAL SYNDROME WITH OR WITHOUT RENAL AGENESIS (ortholog); FOUND IN Golgi apparatus (ortholog) 3 16147570 16287826 + 22301074;30032202 116896189 MODEL JAAIVD010000012;XM_032897235 XP_032753126 protein-coding 625945296 LOC116902719 MICOS complex subunit Mic26-like 6 52218756 52219343 - 22301074;30032202 116902719 MODEL JAAIVD010000024;XM_032905070 XP_032760961 protein-coding 625945299 Gap43 growth associated protein 43 ENCODES a protein that exhibits lysophosphatidic acid binding (ortholog); phosphatidylinositol phosphate binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN axon choice point recognition (ortholog); axon guidance (ortholog); cell fate commitment (ortholog); PARTICIPATES IN N-cadherin signaling pathway; ASSOCIATED WITH Colonic Neoplasms (ortholog); Experimental Seizures (ortholog); Hearing Loss, Noise-Induced (ortholog); FOUND IN axon (ortholog); cell periphery (ortholog); cytoplasm (ortholog) 4 27176383 27270177 - 22301074;30032202 116898853 MODEL JAAIVD010000003;XM_032900206 XP_032756097 neuromodulin protein-coding 625945306 Rnd2 Rho family GTPase 2 INVOLVED IN positive regulation of collateral sprouting (ortholog); FOUND IN early endosome (ortholog) 9 60756892 60760347 + 22301074;30032202 116909924 MODEL JAAIVD010000002;XM_032913689 XP_032769580 rho-related GTP-binding protein RhoN protein-coding 625945315 LOC116893520 tyrosine-protein kinase Yes-like 2 195985413 195989135 - 116893520 MODEL JAAIVD010000001 pseudo 625945316 Mtg2 mitochondrial ribosome associated GTPase 2 ENCODES a protein that exhibits GTPase activity (ortholog); INVOLVED IN mitochondrial large ribosomal subunit assembly (ortholog); regulation of mitochondrial translation (ortholog); regulation of respiratory system process (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrial ribosome (ortholog) 5 157155994 157169953 + 22301074;30032202 116902401 MODEL JAAIVD010000023;XM_032904925;XM_032904926;XM_032904927;XM_032904928 XP_032760816;XP_032760817;XP_032760818;XP_032760819 mitochondrial ribosome-associated GTPase 2 protein-coding 625945337 Akap19 A-kinase anchoring protein 19 ASSOCIATED WITH systemic juvenile rheumatoid arthritis (ortholog); FOUND IN plasma membrane (ortholog) 4 122408802 122411911 + 22301074;30032202 116899366 MODEL JAAIVD010000003;XM_032901074 XP_032756965 C4H2orf88 chromosome 4 C2orf88 homolog;small membrane A-kinase anchor protein protein-coding 625945343 LOC116910576 olfactory receptor 1D2-like 9 93103817 93104752 + 22301074 116910576 MODEL JAAIVD010000002;XM_032914500 XP_032770391 protein-coding 625945346 Hsd3b7 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 ENCODES a protein that exhibits cholest-5-ene-3-beta,7-alpha-diol 3-beta-dehydrogenase activity (ortholog); INVOLVED IN B cell chemotaxis (ortholog); cholesterol catabolic process (ortholog); liver regeneration (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; ASSOCIATED WITH cholestasis (ortholog); congenital bile acid synthesis defect (ortholog); congenital bile acid synthesis defect 1 (ortholog); FOUND IN lipid droplet (ortholog) 2 74100866 74104495 - 22301074 116891457 MODEL JAAIVD010000001;XM_032892537;XM_032892538 XP_032748428;XP_032748429 3 beta-hydroxysteroid dehydrogenase type 7 protein-coding 625945359 Tgds TDP-glucose 4,6-dehydratase ENCODES a protein that exhibits dTDP-glucose 4,6-dehydratase activity (ortholog); UDP-glucose 4,6-dehydratase activity (ortholog); INVOLVED IN glycosaminoglycan biosynthetic process (ortholog); ASSOCIATED WITH Catel Manzke syndrome (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) 12 7806710 7827250 + 22301074;30032202 116913507 MODEL JAAIVD010000007;XM_032917711 XP_032773602 dTDP-D-glucose 4,6-dehydratase protein-coding 625945375 LOC116889717 lon protease-like 22301074;30032202 116889717 MODEL JAAIVD010000061;XM_032890596 XP_032746487 protein-coding 625945376 Baalc BAALC binder of MAP3K1 and KLF4 ASSOCIATED WITH acute myeloid leukemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 1 212234153 212334016 - 22301074;30032202 116910861 MODEL JAAIVD010000025;XM_032914625 XP_032770516 brain and acute leukemia cytoplasmic protein protein-coding 625945383 LOC116907254 uncharacterized LOC116907254 8 92484622 92487145 + 116907254 MODEL JAAIVD010000027;XR_004388814 ncrna 625945388 Eps8l3 EPS8 signaling adaptor L3 ENCODES a protein that exhibits actin filament binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN regulation of hair cycle (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); hypotrichosis 5 (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog) 3 50373284 50386445 - 30032202 116896384 MODEL JAAIVD010000012;XM_032897504;XM_032897505 XP_032753395;XP_032753396 EPS8 like 3;epidermal growth factor receptor kinase substrate 8-like protein 3 protein-coding 625945413 LOC116898392 voltage-dependent anion-selective channel protein 1-like 4 76053473 76112332 - 22301074;30032202 116898392 MODEL JAAIVD010000003;XM_032899686 XP_032755577 protein-coding 625945420 LOC116888328 uncharacterized LOC116888328 X 40972099 40974988 - 116888328 MODEL JAAIVD010000014;XR_004386303 ncrna 625945424 Osbpl2 oxysterol binding protein like 2 ENCODES a protein that exhibits cholesterol binding (ortholog); cholesterol transfer activity (ortholog); phosphatidylinositol transfer activity (ortholog); INVOLVED IN cholesterol transport (ortholog); intracellular cholesterol transport (ortholog); phospholipid transport (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 67 (ortholog); genetic disease (ortholog); status epilepticus (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) 5 157200317 157245079 + 30032202 116902403 MODEL JAAIVD010000023;XM_032904932;XM_032904933 XP_032760823;XP_032760824 oxysterol-binding protein-related protein 2 protein-coding 625945445 Kctd12 potassium channel tetramerization domain containing 12 ENCODES a protein that exhibits G protein-coupled neurotransmitter receptor activity (ortholog); identical protein binding (ortholog); obsolete G protein-coupled neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential (ortholog); INVOLVED IN regulation of G protein-coupled receptor signaling pathway (ortholog); FOUND IN GABA-ergic synapse (ortholog); postsynaptic membrane (ortholog); presynaptic active zone membrane (ortholog) 12 22157698 22159740 - 22301074;30032202 116913798 MODEL JAAIVD010000007;XM_032918104 XP_032773995 BTB/POZ domain-containing protein KCTD12 protein-coding 625945450 Ano4 anoctamin 4 ENCODES a protein that exhibits intracellularly calcium-gated chloride channel activity (ortholog); phospholipid scramblase activity (ortholog); INVOLVED IN calcium activated galactosylceramide scrambling (ortholog); calcium activated phosphatidylcholine scrambling (ortholog); calcium activated phosphatidylserine scrambling (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy (ortholog); endometriosis (ortholog); generalized epilepsy with febrile seizures plus (ortholog); FOUND IN plasma membrane (ortholog) 1 167983194 168381453 - 22301074;30032202 116907828 MODEL JAAIVD010000025;XM_032911017;XM_032911022;XM_032911030;XM_032911037 XP_032766908;XP_032766913;XP_032766921;XP_032766928 anoctamin-4 protein-coding 625945489 LOC116888255 peptidyl-prolyl cis-trans isomerase H-like X 90121187 90121662 - 116888255 MODEL JAAIVD010000014 pseudo 625945490 Gja4 gap junction protein alpha 4 INVOLVED IN blood vessel development (ortholog); calcium ion transport (ortholog); cell-cell signaling (ortholog); PARTICIPATES IN connexin signaling pathway; ASSOCIATED WITH angiosarcoma (ortholog); coronary artery disease (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN connexin complex (ortholog); gap junction (ortholog) 1 30970791 30973341 + 22301074;30032202 116886969 MODEL JAAIVD010000025;XM_032888464 XP_032744355 gap junction alpha-4 protein protein-coding 625945496 LOC116895943 ubiquitin-conjugating enzyme E2 E1-like 3 133936977 133937555 + 116895943 MODEL JAAIVD010000012 pseudo 625945497 Gpr4 G protein-coupled receptor 4 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); angiogenesis involved in wound healing (ortholog); cellular response to acidic pH (ortholog); FOUND IN plasma membrane (ortholog) 2 171395258 171406155 - 22301074 116892544 MODEL JAAIVD010000001;XM_032894309 XP_032750200 G-protein coupled receptor 4 protein-coding 625945503 LOC116888161 39S ribosomal protein L30, mitochondrial-like X 114908225 114908707 + 116888161 MODEL JAAIVD010000014 pseudo 625945504 Mcrip1 MAPK regulated corepressor interacting protein 1 INVOLVED IN gene expression (ortholog); negative regulation of gene expression, epigenetic (ortholog); regulation of epithelial to mesenchymal transition (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nucleus (ortholog) 9 63471241 63478593 + 116909457 MODEL JAAIVD010000002;XM_032913038;XM_032913040 XP_032768929;XP_032768931 mapk-regulated corepressor-interacting protein 1 protein-coding 625945516 Pign phosphatidylinositol glycan anchor biosynthesis class N ENCODES a protein that exhibits mannose-ethanolamine phosphotransferase activity (ortholog); INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); choreatic disease (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) 10 90065762 90214623 + 22301074;30032202 116911062 MODEL JAAIVD010000005;XM_032914828 XP_032770719 GPI ethanolamine phosphate transferase 1 protein-coding 625945551 Angel2 angel homolog 2 ENCODES a protein that exhibits magnesium ion binding (ortholog); mRNA 3'-UTR binding (ortholog); RNA 2',3'-cyclic phosphatase activity (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); mitochondrial mRNA 3'-end processing (ortholog); negative regulation of mitotic cell cycle (ortholog); FOUND IN Cajal body (ortholog); cytoplasm (ortholog); mitochondrial matrix (ortholog) 10 69018029 69037059 + 30032202 116910881 MODEL JAAIVD010000005;XM_032914651;XM_032914652;XM_032914653;XM_032914654;XM_032914655 XP_032770542;XP_032770543;XP_032770544;XP_032770545;XP_032770546 protein angel homolog 2 protein-coding 625945577 Sec16b SEC16 homolog B, endoplasmic reticulum export factor INVOLVED IN endoplasmic reticulum organization (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); ER-dependent peroxisome organization (ortholog); ASSOCIATED WITH Body Weight (ortholog); FOUND IN endoplasmic reticulum exit site (ortholog); endoplasmic reticulum membrane (ortholog) 10 36873168 36911995 + 30032202 116911405 MODEL JAAIVD010000005;XM_032915366 XP_032771257 protein transport protein Sec16B protein-coding 625945606 Dbp D-box binding PAR bZIP transcription factor ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN liver development (ortholog); positive regulation of transcription by RNA polymerase II (ortholog) 2 153811024 153816005 - 30032202 116892128 MODEL JAAIVD010000001;XM_032893615 XP_032749506 D site-binding protein protein-coding 625945614 Hsd17b14 hydroxysteroid 17-beta dehydrogenase 14 ENCODES a protein that exhibits D-threo-aldose 1-dehydrogenase activity (ortholog); identical protein binding (ortholog); INVOLVED IN L-fucose catabolic process (ortholog); ASSOCIATED WITH High Myopia (ortholog); FOUND IN cytosol (ortholog) 2 153949022 153959655 - 30032202 116892143 MODEL JAAIVD010000001;XM_032893633 XP_032749524 17-beta-hydroxysteroid dehydrogenase 14 protein-coding 625945626 LOC116896253 zinc finger protein 728-like 3 28424874 28428547 + 30032202 116896253 MODEL JAAIVD010000012;XM_032897325 XP_032753216 protein-coding 625945633 LOC116894726 TD and POZ domain-containing protein 4-like 2 41920555 41921635 - 116894726 MODEL JAAIVD010000001 pseudo 625945634 Dtx4 deltex E3 ubiquitin ligase 4 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of innate immune response (ortholog); proteasomal protein catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); pancreatic ductal carcinoma (ortholog); FOUND IN centrosome (ortholog) 2 12488458 12520110 - 22301074;30032202 116890992 MODEL JAAIVD010000001;XM_032891666;XM_032891667 XP_032747557;XP_032747558 E3 ubiquitin-protein ligase DTX4 protein-coding 625945651 LOC116911576 60S ribosomal protein L29-like 10 46428166 46428687 + 116911576 MODEL JAAIVD010000005 pseudo 625945652 Flywch2 FLYWCH family member 2 9 1081564 1090134 - 116908691 MODEL JAAIVD010000002;XM_032912006;XM_032912008;XR_004389012 XP_032767897;XP_032767899 protein-coding 625945666 Frey1 Frey regulator of sperm-oocyte fusion 1 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); gene expression (ortholog); maintenance of protein localization in endoplasmic reticulum (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); membrane (ortholog) 5 66521120 66521885 + 116901642 MODEL JAAIVD010000023;XM_032903742 XP_032759633 C5H11orf94 chromosome 5 C11orf94 homolog;uncharacterized protein C11orf94 homolog protein-coding 625945672 Acox2 acyl-CoA oxidase 2 ENCODES a protein that exhibits 3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoyl-CoA 24-hydroxylase activity (ortholog); fatty acid binding (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN bile acid biosynthetic process (ortholog); fatty acid beta-oxidation (ortholog); fatty acid beta-oxidation using acyl-CoA oxidase (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; ASSOCIATED WITH congenital bile acid synthesis defect 6 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN peroxisome (ortholog) 12 78649219 78678557 - 22301074;30032202 116913597 MODEL JAAIVD010000007;XM_032917847 XP_032773738 peroxisomal acyl-coenzyme A oxidase 2 protein-coding 625945689 LOC116897596 small nucleolar RNA SNORA17 3 7586788 7586910 - 116897596 MODEL JAAIVD010000012 pseudo 625945690 Atp4a ATPase H+/K+ transporting subunit alpha ENCODES a protein that exhibits magnesium ion binding (ortholog); P-type potassium:proton transporter activity (ortholog); potassium ion binding (ortholog); INVOLVED IN pH reduction (ortholog); potassium ion transmembrane transport (ortholog); regulation of proton transport (ortholog); PARTICIPATES IN cimetidine pharmacodynamics pathway; esomeprazole pharmacodynamics pathway; esomeprazole pharmacokinetics pathway; ASSOCIATED WITH stomach cancer (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog) 2 165291205 165303726 - 22301074;30032202 116892303 MODEL JAAIVD010000001;XM_032893920;XM_032893921 XP_032749811;XP_032749812 potassium-transporting ATPase alpha chain 1 protein-coding 625945717 Bex4 brain expressed X-linked 4 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); histone deacetylase binding (ortholog); molecular function inhibitor activity (ortholog); INVOLVED IN chromosome segregation (ortholog); negative regulation of protein ubiquitination (ortholog); negative regulation of tubulin deacetylation (ortholog); ASSOCIATED WITH cholestasis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule (ortholog) X 88129037 88130508 + 30032202 116888490 MODEL JAAIVD010000014;XM_032889762 XP_032745653 protein BEX4 protein-coding 625945724 Sdhaf2 succinate dehydrogenase complex assembly factor 2 INVOLVED IN mitochondrial electron transport, succinate to ubiquinone (ortholog); mitochondrial respiratory chain complex II assembly (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); Hereditary Paraganglioma-Pheochromocytoma Syndromes (ortholog); ovarian cancer (ortholog); FOUND IN mitochondrion (ortholog) 2 9970054 9998686 - 22301074;30032202 116890955 MODEL JAAIVD010000001;XM_032891611;XM_032891612;XM_032891613;XR_004386798;XR_004386799 XP_032747502;XP_032747503;XP_032747504 succinate dehydrogenase assembly factor 2, mitochondrial protein-coding 625945747 LOC116913006 small nucleolar RNA SNORA17 11 1187187 1187297 + 116913006 MODEL JAAIVD010000006 pseudo 625945748 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92731074 92731145 - 116904852 MODEL JAAIVD010000024 trna 625945749 LOC116910326 stathmin-like 9 59056288 59056733 + 22301074;30032202 116910326 MODEL JAAIVD010000002;XM_032914186 XP_032770077 protein-coding 625945752 LOC116911577 dnaJ homolog subfamily C member 10-like 10 14529152 14531393 - 116911577 MODEL JAAIVD010000005 pseudo 625945753 Epgn epithelial mitogen ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); growth factor activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell surface receptor signaling pathway (ortholog); epidermal growth factor receptor signaling pathway (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; FOUND IN extracellular region (ortholog); plasma membrane (ortholog) 11 4432244 4440235 + 30032202 116912469 MODEL JAAIVD010000006;XM_032916537 XP_032772428 epigen protein-coding 625945762 Prf1 perforin 1 ENCODES a protein that exhibits calcium ion binding (ortholog); identical protein binding (ortholog); wide pore channel activity (ortholog); INVOLVED IN circadian rhythm (ortholog); defense response to tumor cell (ortholog); defense response to virus (ortholog); ASSOCIATED WITH aplastic anemia (ortholog); asthma (ortholog); autistic disorder (ortholog); FOUND IN cytolytic granule (ortholog); cytoplasmic vesicle (ortholog); extracellular region (ortholog) 18 27133608 27139550 + 22301074 116887085 MODEL JAAIVD010000013;XM_032888593 XP_032744484 perforin-1 protein-coding 625945769 LOC116902545 small nucleolar RNA SNORA29 5 27265704 27265843 - 116902545 MODEL JAAIVD010000023;XR_004388146 snorna 625945772 Atp2c2 ATPase secretory pathway Ca2+ transporting 2 ENCODES a protein that exhibits P-type calcium transporter activity (ortholog); P-type manganese transporter activity (ortholog); INVOLVED IN mammary gland epithelium development (ortholog); positive regulation of calcium ion import (ortholog); protein localization to plasma membrane (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; FOUND IN cytoplasmic side of plasma membrane (ortholog); cytoplasmic vesicle (ortholog); perinuclear region of cytoplasm (ortholog) 17 39344175 39402928 + 22301074;30032202 116886188 MODEL JAAIVD010000011;XM_032887561 XP_032743452 calcium-transporting ATPase type 2C member 2 protein-coding 625945803 Ddhd1 DDHD domain containing 1 INVOLVED IN positive regulation of mitochondrial fission (ortholog); sperm mitochondrion organization (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); hereditary spastic paraplegia (ortholog) 12 77377990 77443682 + 22301074;30032202 116913068 MODEL JAAIVD010000007;XM_032917195;XM_032917196;XM_032917197;XM_032917199;XM_032917200;XM_032917201;XM_032917202 XP_032773086;XP_032773087;XP_032773088;XP_032773090;XP_032773091;XP_032773092;XP_032773093 phospholipase DDHD1 protein-coding 625945834 Cavin3 caveolae associated protein 3 ENCODES a protein that exhibits protein kinase C binding (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); cortical actin cytoskeleton organization (ortholog); negative regulation of fermentation (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); protein-containing complex (ortholog) 2 104312450 104314080 - 30032202 116891817 MODEL JAAIVD010000001;XM_032893173 XP_032749064 caveolae-associated protein 3 protein-coding 625945840 LOC116889484 small nucleolar RNA SNORA29 X 41563679 41563815 - 116889484 MODEL JAAIVD010000014;XR_004386435 snorna 625945843 Shank1 SH3 and multiple ankyrin repeat domains 1 ENCODES a protein that exhibits ankyrin repeat binding (ortholog); G protein-coupled receptor binding (ortholog); identical protein binding (ortholog); INVOLVED IN adult behavior (ortholog); AMPA selective glutamate receptor signaling pathway (ortholog); associative learning (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); autistic disorder (ortholog); developmental and epileptic encephalopathy 11 (ortholog); FOUND IN dendrite (ortholog); dendritic spine (ortholog); excitatory synapse (ortholog) 2 155169457 155216472 - 30032202 116892216 MODEL JAAIVD010000001;XM_032893776 XP_032749667 SH3 and multiple ankyrin repeat domains protein 1 protein-coding 625945871 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92756276 92756347 + 116904842 MODEL JAAIVD010000024 trna 625945872 Muc2 mucin 2, oligomeric mucus/gel-forming ENCODES a protein that exhibits cupric ion binding (ortholog); cuprous ion binding (ortholog); extracellular matrix structural constituent (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to interleukin-1 (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); adenoma (ortholog); allergic conjunctivitis (ortholog); FOUND IN extracellular matrix (ortholog); inner mucus layer (ortholog); mucus layer (ortholog) 2 7769003 7801010 - 22301074;30032202 116891058 MODEL JAAIVD010000001;XM_032891753 XP_032747644 mucin-2 protein-coding 625945928 Sh3bp5l SH3 binding domain protein 5 like ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog) 9 39888240 39903071 - 22301074;30032202 116908947 MODEL JAAIVD010000002;XM_032912405;XM_032912406;XM_032912407;XM_032912408 XP_032768296;XP_032768297;XP_032768298;XP_032768299 SH3 domain-binding protein 5-like protein-coding 625945948 C8a complement C8 alpha chain ENCODES a protein that exhibits complement binding (ortholog); protein-containing complex binding (ortholog); wide pore channel activity (ortholog); INVOLVED IN complement activation (ortholog); complement activation, GZMK pathway (ortholog); killing of cells of another organism (ortholog); ASSOCIATED WITH meningitis (ortholog); myocardial infarction (ortholog); Neisseriaceae Infections (ortholog); FOUND IN extracellular region (ortholog); membrane attack complex (ortholog); other organism cell membrane (ortholog) 1 49739310 49793983 + 22301074 116887623 MODEL JAAIVD010000025;XM_032889228;XM_032889232 XP_032745119;XP_032745123 complement component C8 alpha chain protein-coding 625945968 LOC116906535 B-cell lymphoma/leukemia 10-like 8 34406438 34407156 - 116906535 MODEL JAAIVD010000027 pseudo 625945969 LOC116901768 uncharacterized LOC116901768 5 94284957 94286058 - 116901768 MODEL JAAIVD010000023;XR_004388022;XR_004388023 ncrna 625945976 LOC116911901 small nucleolar RNA SNORD81 10 40327672 40327748 + 116911901 MODEL JAAIVD010000005;XR_004389408 snorna 625945979 LOC116899059 zinc finger protein 260-like 4 79379032 79415535 - 30032202 116899059 MODEL JAAIVD010000003;XM_032900530 XP_032756421 protein-coding 625945988 Apobr apolipoprotein B receptor ENCODES a protein that exhibits apolipoprotein receptor activity (ortholog); lipoprotein particle receptor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN foam cell differentiation (ortholog); triglyceride metabolic process (ortholog); FOUND IN plasma membrane (ortholog) 2 75336127 75340294 - 30032202 116891519 MODEL JAAIVD010000001;XM_032892657 XP_032748548 protein-coding 625945996 LOC116885895 pumilio homolog 3-like 16 14968644 14987847 - 30032202 116885895 MODEL JAAIVD010000004;XM_032887214 XP_032743105 protein-coding 625946003 LOC116886749 small nucleolar RNA SNORD41 17 15242299 15242368 - 116886749 MODEL JAAIVD010000011;XR_004386152 snorna 625946006 Herc2 HECT and RLD domain containing E3 ubiquitin protein ligase 2 ENCODES a protein that exhibits SUMO binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN DNA damage response (ortholog); negative regulation of Notch signaling pathway (ortholog); neuron differentiation (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 38 (ortholog); Developmental Disabilities (ortholog); exotropia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 2 142969120 143150253 - 22301074;30032202 116892042 MODEL JAAIVD010000001;XM_032893506 XP_032749397 E3 ubiquitin-protein ligase HERC2 protein-coding 625946103 LOC116913234 riboflavin kinase-like 12 72696638 72698154 - 116913234 MODEL JAAIVD010000007 pseudo 625946104 LOC116888332 solute carrier family 25 member 39-like X 14281867 14282959 + 116888332 MODEL JAAIVD010000014 pseudo 625946105 Gnai3 G protein subunit alpha i3 ENCODES a protein that exhibits G protein-coupled serotonin receptor binding (ortholog); GDP binding (ortholog); GTPase activating protein binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cell division (ortholog); GTP metabolic process (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT2 receptor; endothelin signaling pathway; epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH amnestic disorder (ortholog); Auriculocondylar Syndrome (ortholog); Auriculocondylar Syndrome 1 (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) 3 50112601 50149733 + 22301074;30032202 116896371 MODEL JAAIVD010000012;XM_032897491 XP_032753382 guanine nucleotide-binding protein G(i) subunit alpha protein-coding 625946118 Rab3il1 RAB3A interacting protein like 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); identical protein binding (ortholog); kinase binding (ortholog) 2 151174342 151184526 - 30032202 116893301 MODEL JAAIVD010000001;XM_032895129 XP_032751020 guanine nucleotide exchange factor for Rab-3A protein-coding 625946131 Katna1 katanin catalytic subunit A1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); dynein complex binding (ortholog); microtubule binding (ortholog); INVOLVED IN cytoplasmic microtubule organization (ortholog); intracellular protein localization (ortholog); microtubule bundle formation (ortholog); FOUND IN axon (ortholog); centriolar satellite (ortholog); centrosome (ortholog) 2 229277604 229320214 - 22301074;30032202 116893039 MODEL JAAIVD010000001;XM_032895003 XP_032750894 katanin p60 ATPase-containing subunit A1 protein-coding 625946146 Igfn1 immunoglobulin like and fibronectin type III domain containing 1 INVOLVED IN myoblast differentiation (ortholog); myoblast fusion (ortholog); myotube differentiation (ortholog); ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); FOUND IN nucleus (ortholog); Z disc (ortholog) 10 17784533 17807713 - 22301074 116911583 MODEL JAAIVD010000005;XM_032915563 XP_032771454 immunoglobulin-like and fibronectin type III domain-containing protein 1 protein-coding 625946164 Acat1 acetyl-CoA acetyltransferase 1 ENCODES a protein that exhibits acetyl-CoA C-acetyltransferase activity (ortholog); C-acetyltransferase activity (ortholog); cholesterol O-acyltransferase activity (ortholog); INVOLVED IN acetyl-CoA biosynthetic process (ortholog); acetyl-CoA catabolic process (ortholog); adipose tissue development (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyacyl-CoA dehydrogenase deficiency pathway; ASSOCIATED WITH arteriosclerosis (ortholog); beta-ketothiolase deficiency (ortholog); carbohydrate metabolic disorder (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 8 47570092 47597932 - 30032202 116906725 MODEL JAAIVD010000027;XM_032909536 XP_032765427 acetyl-CoA acetyltransferase, mitochondrial protein-coding 625946180 Tradd TNFRSF1A associated via death domain ENCODES a protein that exhibits death domain binding (ortholog); identical protein binding (ortholog); kinase binding (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); cellular response to tumor necrosis factor (ortholog); extrinsic apoptotic signaling pathway (ortholog); PARTICIPATES IN ceramide signaling pathway; Toll-like receptor signaling pathway; Trail mediated signaling pathway; ASSOCIATED WITH Liver Reperfusion Injury (ortholog); Optic Nerve Injuries (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog); protein-containing complex (ortholog) 17 24986301 24991886 - 22301074;30032202 116886047 MODEL JAAIVD010000011;XM_032887351 XP_032743242 tumor necrosis factor receptor type 1-associated DEATH domain protein protein-coding 625946189 Mrpl53 mitochondrial ribosomal protein L53 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 6 63114869 63116396 - 30032202 116903628 MODEL JAAIVD010000024;XM_032906288 XP_032762179 39S ribosomal protein L53, mitochondrial protein-coding 625946196 LOC116893963 ribosomal biogenesis factor 2 98028297 98028708 + 22301074;30032202 116893963 MODEL JAAIVD010000001;XM_032895680 XP_032751571 protein-coding 625946201 Sapcd1 suppressor APC domain containing 1 18 7625918 7627853 - 116887185 MODEL JAAIVD010000013;XM_032888740 XP_032744631 suppressor APC domain-containing protein 1 protein-coding 625946209 Ncmap non-compact myelin associated protein ENCODES a protein that exhibits structural constituent of myelin sheath (ortholog); INVOLVED IN peripheral nervous system myelin formation (ortholog); positive regulation of myelination (ortholog); FOUND IN paranode region of axon (ortholog); plasma membrane (ortholog); Schmidt-Lanterman incisure (ortholog) 1 22819466 22847762 + 30032202 116886700 MODEL JAAIVD010000025;XM_032888205 XP_032744096 noncompact myelin-associated protein protein-coding 625946218 LOC116899872 small nucleolar RNA SNORA17 4 42720665 42720790 - 116899872 MODEL JAAIVD010000003;XR_004387866 snorna 625946221 Nedd8 NEDD8 ubiquitin like modifier ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to camptothecin (ortholog); intracellular protein localization (ortholog); protein neddylation (ortholog); PARTICIPATES IN neddylation pathway; p53 signaling pathway; proteasome degradation pathway involving cullin-dependent ubiquitin ligases; ASSOCIATED WITH alcohol-associated liver disease (ortholog); malignant astrocytoma (ortholog); Parkinson's disease (ortholog); FOUND IN glutamatergic synapse (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 12 69333015 69344880 + 30032202 116913117 MODEL JAAIVD010000007;XM_032917273 XP_032773164 protein-coding 625946229 LOC116890559 small nucleolar RNA SNORA17 1 103297008 103297117 - 116890559 MODEL JAAIVD010000025 pseudo 625946230 LOC116891968 uncharacterized LOC116891968 2 126686593 126688183 - 116891968 MODEL JAAIVD010000001;XR_004386882 ncrna 625946234 LOC116906392 small nucleolar RNA SNORD113/SNORD114 family 7 127185359 127185429 + 116906392 MODEL JAAIVD010000026;XR_004388661 snorna 625946237 Trnai-gau transfer RNA isoleucine (anticodon GAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889671 MODEL JAAIVD010000045 trna 625946238 Cndp2 carnosine dipeptidase 2 ENCODES a protein that exhibits dipeptidase activity (ortholog); metallodipeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN proteolysis (ortholog); PARTICIPATES IN histidine metabolic pathway; histidinemia pathway; ASSOCIATED WITH Diabetic Nephropathies (ortholog); steatotic liver disease (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 15 47684254 47701339 + 22301074;30032202 116884621 MODEL JAAIVD010000010;XM_032885762 XP_032741653 cytosolic non-specific dipeptidase protein-coding 625946254 Cwc15 CWC15 spliceosome associated protein homolog INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) 8 10280886 10291492 + 30032202 116907291 MODEL JAAIVD010000027;XM_032910240;XM_032910241 XP_032766131;XP_032766132 spliceosome-associated protein CWC15 homolog protein-coding 625946267 LOC116891756 60S ribosomal protein L15-like 1 55395614 55396261 + 116891756 MODEL JAAIVD010000025 pseudo 625946268 LOC116906097 aldose reductase-related protein 2-like 7 73342609 73344866 - 116906097 MODEL JAAIVD010000026 pseudo 625946269 LOC116894299 RNA-binding protein 4B-like 2 139073832 139074248 - 116894299 MODEL JAAIVD010000001 pseudo 625946270 Thbd thrombomodulin ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN female pregnancy (ortholog); negative regulation of blood coagulation (ortholog); response to cAMP (ortholog); PARTICIPATES IN protein C anticoagulant pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); Acute Lung Injury (ortholog); FOUND IN apicolateral plasma membrane (ortholog); cell surface (ortholog); external side of plasma membrane (ortholog) 5 127969137 127972809 - 22301074 116902073 MODEL JAAIVD010000023;XM_032904363 XP_032760254 protein-coding 625946275 LOC116905910 eukaryotic translation initiation factor 2D-like 7 78529759 78531396 + 116905910 MODEL JAAIVD010000026 pseudo 625946276 Vps37a VPS37A subunit of ESCRT-I INVOLVED IN ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway (ortholog); ASSOCIATED WITH hereditary spastic paraplegia (ortholog); hereditary spastic paraplegia 53 (ortholog); transverse myelitis (ortholog); FOUND IN ESCRT I complex (ortholog); nucleoplasm (ortholog) 13 46927380 46959251 - 30032202 116914381 MODEL JAAIVD010000008;XM_032918586;XM_032918587;XM_032918588 XP_032774477;XP_032774478;XP_032774479 vacuolar protein sorting-associated protein 37A protein-coding 625946296 LOC116889037 adenine DNA glycosylase-like X 19861823 19863012 + 116889037 MODEL JAAIVD010000014 pseudo 625946297 LOC116893095 serine/arginine-rich splicing factor 3-like 2 61277661 61283784 + 116893095 MODEL JAAIVD010000001 pseudo 625946298 LOC116909540 olfactory receptor 10-like 9 31980544 31981511 + 22301074 116909540 MODEL JAAIVD010000002;XM_032913156 XP_032769047 protein-coding 625946302 Gp2 glycoprotein 2 ENCODES a protein that exhibits antigen binding (ortholog); INVOLVED IN antigen transcytosis by M cells in mucosal-associated lymphoid tissue (ortholog); ASSOCIATED WITH Body Weight (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN apical plasma membrane (ortholog); endosome (ortholog); external side of plasma membrane (ortholog) 2 82206866 82221137 + 30032202 116893926 MODEL JAAIVD010000001;XM_032895647 XP_032751538 pancreatic secretory granule membrane major glycoprotein GP2 protein-coding 625946316 Slc4a1ap solute carrier family 4 member 1 adaptor protein FOUND IN nucleoplasm (ortholog) 7 22615423 22642307 - 22301074;30032202 116905966 MODEL JAAIVD010000026;XM_032908971 XP_032764862 kanadaptin protein-coding 625946334 LOC116889958 olfactory receptor 6C6-like 1 161882351 161883334 - 22301074;30032202 116889958 MODEL JAAIVD010000025;XM_032890760 XP_032746651 protein-coding 625946338 Cmss1 cms1 ribosomal small subunit homolog 4 41403301 41429529 - 30032202 116898911 MODEL JAAIVD010000003;XM_032900318;XM_032900319 XP_032756209;XP_032756210 protein CMSS1 protein-coding 625946356 Il31 interleukin 31 ENCODES a protein that exhibits cytokine activity (ortholog); cytokine receptor binding (ortholog); oncostatin-M receptor binding (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); ASSOCIATED WITH atopic dermatitis (ortholog); FOUND IN extracellular region (ortholog) 16 30366143 30368569 + 30032202 116885286 MODEL JAAIVD010000004;XM_032886533 XP_032742424 interleukin-31 protein-coding 625946362 LOC116906817 olfactory receptor 1082-like 1 156890165 156891096 - 116906817 MODEL JAAIVD010000025 pseudo 625946363 Mark1 microtubule affinity regulating kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); phosphatidic acid binding (ortholog); INVOLVED IN cytoskeleton organization (ortholog); establishment of mitochondrion localization (ortholog); intracellular signal transduction (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Stomach Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytoskeleton (ortholog); dendrite (ortholog) 10 63070581 63176519 - 22301074;30032202 116911710 MODEL JAAIVD010000005;XM_032915679;XM_032915680;XM_032915681 XP_032771570;XP_032771571;XP_032771572 serine/threonine-protein kinase MARK1 protein-coding 625946392 LOC116900583 olfactory receptor 4F6-like 5 90491005 90491940 + 22301074 116900583 MODEL JAAIVD010000023;XM_032902305 XP_032758196 protein-coding 625946395 LOC116906126 dehydrogenase/reductase SDR family member 7-like 7 86667481 86678112 - 116906126 MODEL JAAIVD010000026;XM_032909122 XP_032765013 protein-coding 625946403 Cacna1g calcium voltage-gated channel subunit alpha1 G ENCODES a protein that exhibits low voltage-gated calcium channel activity (ortholog); scaffold protein binding (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN action potential (ortholog); artery smooth muscle contraction (ortholog); calcium ion import (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH brain disease (ortholog); cerebellar ataxia (ortholog); cerebellar ataxia type 42 (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); dendrite (ortholog) 9 51067213 51135153 + 22301074;30032202 116909626 MODEL JAAIVD010000002;XM_032913254;XM_032913255;XM_032913256;XM_032913257;XM_032913258;XM_032913260;XM_032913261;XM_032913262;XM_032913263;XM_032913264;XM_032913265;XM_032913266;XM_032913267 XP_032769145;XP_032769146;XP_032769147;XP_032769148;XP_032769149;XP_032769151;XP_032769152;XP_032769153;XP_032769154;XP_032769155;XP_032769156;XP_032769157;XP_032769158 voltage-dependent T-type calcium channel subunit alpha-1G protein-coding 625946462 LOC116894164 olfactory receptor 2D3-like 2 105060408 105061340 - 22301074 116894164 MODEL JAAIVD010000001;XM_032895881 XP_032751772 protein-coding 625946465 LOC116901351 phosducin-like protein 5 15114324 15123707 - 22301074 116901351 MODEL JAAIVD010000023;XM_032903198 XP_032759089 protein-coding 625946473 Tmem130 transmembrane protein 130 FOUND IN Golgi apparatus (ortholog) 16 8429959 8452574 + 116885459 MODEL JAAIVD010000004;XM_032886741 XP_032742632 protein-coding 625946485 Gldc glycine decarboxylase ENCODES a protein that exhibits enzyme binding (ortholog); glycine binding (ortholog); glycine dehydrogenase (decarboxylating) activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); glycine catabolic process (ortholog); glycine decarboxylation via glycine cleavage system (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; folate cycle metabolic pathway; ASSOCIATED WITH COVID-19 (ortholog); Developmental Disabilities (ortholog); generalized epilepsy (ortholog); FOUND IN glycine cleavage complex (ortholog); mitochondrion (ortholog) 2 30205049 30284540 - 22301074;30032202 116891082 MODEL JAAIVD010000001;XM_032891796 XP_032747687 glycine dehydrogenase (decarboxylating), mitochondrial protein-coding 625946514 LOC116886592 activated RNA polymerase II transcriptional coactivator p15-like 17 5551668 5552090 - 22301074;30032202 116886592 MODEL JAAIVD010000011;XM_032888115 XP_032744006 protein-coding 625946518 Spmip8 sperm microtubule inner protein 8 INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); sperm flagellum (ortholog) 17 2173736 2182620 + 116886116 MODEL JAAIVD010000011;XM_032887454 XP_032743345 Tepp testis, prostate and placenta expressed;testis, prostate and placenta-expressed protein protein-coding 625946530 Sema4c semaphorin 4C INVOLVED IN cell migration in hindbrain (ortholog); cerebellum development (ortholog); muscle cell differentiation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density (ortholog); postsynaptic density membrane (ortholog) 4 112772043 112781971 - 30032202 116899294 MODEL JAAIVD010000003;XM_032900938;XM_032900939;XM_032900940;XM_032900941 XP_032756829;XP_032756830;XP_032756831;XP_032756832 semaphorin-4C protein-coding 625946557 LOC116889223 huntingtin-interacting protein M X 11414527 11415778 - 22301074 116889223 MODEL JAAIVD010000014;XM_032890376 XP_032746267 protein-coding 625946562 LOC116897445 U6 spliceosomal RNA 3 177124081 177124187 - 116897445 MODEL JAAIVD010000012;XR_004387480 snrna 625946565 Ppib peptidylprolyl isomerase B ENCODES a protein that exhibits peptidyl-prolyl cis-trans isomerase activity (ortholog); RNA polymerase binding (ortholog); INVOLVED IN bone development (ortholog); host-mediated activation of viral genome replication (ortholog); host-mediated activation of viral process (ortholog); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway; ASSOCIATED WITH genetic disease (ortholog); human immunodeficiency virus infectious disease (ortholog); osteogenesis imperfecta (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum chaperone complex (ortholog); perinuclear region of cytoplasm (ortholog) 8 60396645 60402930 + 22301074;30032202 116906930 MODEL JAAIVD010000027;XM_032909855 XP_032765746 peptidyl-prolyl cis-trans isomerase B protein-coding 625946574 LOC116884979 protein S100-A6-like 15 25334571 25334839 + 116884979 MODEL JAAIVD010000010 pseudo 625946575 Nedd1 NEDD1 gamma-tubulin ring complex targeting factor FOUND IN apical part of cell (ortholog); centriole (ortholog); centrosome (ortholog) 1 171782470 171823298 - 30032202 116908164 MODEL JAAIVD010000025;XM_032911464 XP_032767355 protein NEDD1 protein-coding 625946594 LOC116888284 glyceraldehyde-3-phosphate dehydrogenase-like 1 229180274 229181128 - 116888284 MODEL JAAIVD010000025 pseudo 625946595 Htr6 5-hydroxytryptamine receptor 6 ENCODES a protein that exhibits G protein-coupled serotonin receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating serotonin receptor signaling pathway (ortholog); cerebral cortex cell migration (ortholog); G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger (ortholog); PARTICIPATES IN serotonin signaling pathway via receptors engaging G alphas protein family; ASSOCIATED WITH Alzheimer's disease (ortholog); amphetamine abuse (ortholog); Memory Disorders (ortholog); FOUND IN cilium (ortholog); dendrite (ortholog); plasma membrane (ortholog) 1 19126213 19142372 + 22301074;30032202 116893774 MODEL JAAIVD010000025;XM_032895477 XP_032751368 protein-coding 625946602 Ankub1 ankyrin repeat and ubiquitin domain containing 1 3 96247712 96284294 - 22301074 116896845 MODEL JAAIVD010000012;XM_032898350;XM_032898351 XP_032754241;XP_032754242 protein ANKUB1 protein-coding 625946615 Commd2 COMM domain containing 2 FOUND IN protein-containing complex (ortholog) 3 96237283 96241570 - 116896846 MODEL JAAIVD010000012;XM_032898352 XP_032754243 COMM domain-containing protein 2 protein-coding 625946624 LOC116900390 olfactory receptor 5W2-like 5 69753302 69754240 - 22301074;30032202 116900390 MODEL JAAIVD010000023;XM_032902136 XP_032758027 protein-coding 625946628 LOC116904477 ran-specific GTPase-activating protein-like 6 139765234 139771851 + 116904477 MODEL JAAIVD010000024 pseudo 625946629 LOC116906517 U4 spliceosomal RNA 7 10907817 10908031 + 116906517 MODEL JAAIVD010000026 pseudo 625946630 LOC116914158 small nucleolar RNA SNORA84 12 72065204 72065336 - 116914158 MODEL JAAIVD010000007;XR_004389708 snorna 625946633 Klk4 kallikrein related peptidase 4 INVOLVED IN amelogenesis (ortholog); enamel mineralization (ortholog); extracellular matrix disassembly (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta type 2A1 (ortholog); breast cancer (ortholog) 2 155497337 155501627 - 22301074;30032202 116892222 MODEL JAAIVD010000001;XM_032893787 XP_032749678 kallikrein-4 protein-coding 625946641 LOC116895840 60S ribosomal protein L19-like 3 81971496 81972012 - 116895840 MODEL JAAIVD010000012 pseudo 625946642 LOC116906389 small nucleolar RNA SNORD113/SNORD114 family 7 127265642 127265716 + 116906389 MODEL JAAIVD010000026;XR_004388659 snorna 625946645 LOC116906470 small nucleolar RNA SNORA17 7 50186511 50186602 + 116906470 MODEL JAAIVD010000026 pseudo 625946646 LOC116887992 cactin-like X 73038778 73079648 + 116887992 MODEL JAAIVD010000014 pseudo 625946647 LOC116885381 intraflagellar transport protein 20 homolog 16 6002456 6002941 - 30032202 116885381 MODEL JAAIVD010000004;XM_032886657 XP_032742548 protein-coding 625946652 Setd4 SET domain containing 4 ENCODES a protein that exhibits histone H3K4 methyltransferase activity (ortholog); histone H4K20 methyltransferase activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); positive regulation of inflammatory response (ortholog); positive regulation of interleukin-6 production (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) 4 51015287 51033311 + 22301074;30032202 116898975 MODEL JAAIVD010000003;XM_032900400 XP_032756291 SET domain-containing protein 4 protein-coding 625946666 LOC116887951 60S ribosomal protein L24-like X 63703538 63704176 + 30032202 116887951 MODEL JAAIVD010000014;XM_032889402 XP_032745293 protein-coding 625946670 LOC116906340 U6 spliceosomal RNA 7 7834961 7835067 - 116906340 MODEL JAAIVD010000026;XR_004388621 snrna 625946673 Fuca2 alpha-L-fucosidase 2 ENCODES a protein that exhibits alpha-L-fucosidase activity (ortholog); INVOLVED IN fucose metabolic process (ortholog); glycoside catabolic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); High Myopia (ortholog); FOUND IN extracellular region (ortholog) 2 223684984 223699432 - 22301074;30032202 116893009 MODEL JAAIVD010000001;XM_032894971 XP_032750862 plasma alpha-L-fucosidase protein-coding 625946684 LOC116893957 60S ribosomal protein L27-like 2 97128210 97128602 - 22301074;30032202 116893957 MODEL JAAIVD010000001;XM_032895675 XP_032751566 protein-coding 625946689 Pcdh18 protocadherin 18 INVOLVED IN brain development (ortholog) 3 104581286 104595243 + 22301074 116896896 MODEL JAAIVD010000012;XM_032898443 XP_032754334 protocadherin-18 protein-coding 625946697 Npy neuropeptide Y ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); neuropeptide activity (ortholog); neuropeptide Y receptor binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adult feeding behavior (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); PARTICIPATES IN neuropeptide Y metabolic pathway; ASSOCIATED WITH absence epilepsy (ortholog); AIDS Dementia Complex (ortholog); alcohol dependence (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); GABA-ergic synapse (ortholog) 6 91247542 91254873 - 22301074;30032202 116903830 MODEL JAAIVD010000024;XM_032906542 XP_032762433 pro-neuropeptide Y protein-coding 625946705 Pigy phosphatidylinositol glycan anchor biosynthesis class Y ENCODES a protein that exhibits phosphatidylinositol N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH hyperphosphatasia with impaired intellectual development syndrome (ortholog); hyperphosphatasia with impaired intellectual development syndrome 6 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex (ortholog); plasma membrane (ortholog) 8 18406721 18408988 + 116907487 MODEL JAAIVD010000027;XM_032910478 XP_032766369 phosphatidylinositol N-acetylglucosaminyltransferase subunit Y protein-coding 625946711 LOC116907123 GTP-binding nuclear protein Ran 8 90365690 90366738 - 22301074;30032202 116907123 MODEL JAAIVD010000027;XM_032910096 XP_032765987 protein-coding 625946716 LOC116894120 olfactory receptor 52N1 2 103779797 103780762 - 22301074 116894120 MODEL JAAIVD010000001;XM_032895838 XP_032751729 protein-coding 625946719 LOC116907164 short transmembrane mitochondrial protein 1-like 8 98382623 98383387 - 116907164 MODEL JAAIVD010000027 pseudo 625946720 LOC116895067 small nucleolar RNA SNORA17 2 59904141 59904251 + 116895067 MODEL JAAIVD010000001 pseudo 625946721 LOC116890322 U6 spliceosomal RNA 1 154966467 154966573 - 116890322 MODEL JAAIVD010000025;XR_004386545 snrna 625946724 Nphp1 nephrocystin 1 INVOLVED IN intracellular protein localization (ortholog); photoreceptor cell outer segment organization (ortholog); positive regulation of bicellular tight junction assembly (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); CAKUT (ortholog); FOUND IN cell-cell junction (ortholog); ciliary base (ortholog); ciliary transition zone (ortholog) 5 106520591 106576389 - 22301074;30032202 116901941 MODEL JAAIVD010000023;XM_032904172;XM_032904173;XM_032904174;XM_032904175 XP_032760063;XP_032760064;XP_032760065;XP_032760066 nephrocystin-1 protein-coding 625946755 LOC116887864 melanoma-associated antigen B4-like X 45189713 45190711 - 30032202 116887864 MODEL JAAIVD010000014;XM_032889360 XP_032745251 protein-coding 625946758 LOC116904637 glyceraldehyde-3-phosphate dehydrogenase-like 6 33944220 33944973 - 116904637 MODEL JAAIVD010000024 pseudo 625946759 Hspa6 heat shock protein family A (Hsp70) member 6 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); enzyme binding (ortholog); heat shock protein binding (ortholog); INVOLVED IN cellular heat acclimation (ortholog); cellular response to heat (ortholog); protein refolding (ortholog); ASSOCIATED WITH systemic juvenile rheumatoid arthritis (ortholog); FOUND IN centriole (ortholog); COP9 signalosome (ortholog); cytoplasm (ortholog) 10 50218027 50219991 - 22301074;30032202 116910907 MODEL JAAIVD010000005;XM_032914669 XP_032770560 heat shock 70 kDa protein 6 protein-coding 625946763 LOC116911822 small nucleolar RNA SNORA17 10 15966014 15966145 - 116911822 MODEL JAAIVD010000005;XR_004389359 snorna 625946766 LOC116890084 40S ribosomal protein S16-like 1 226393565 226394043 - 116890084 MODEL JAAIVD010000025 pseudo 625946767 LOC116910953 contactin-associated protein like 5-4-like 10 81394641 81517163 - 116910953 MODEL JAAIVD010000005;XM_032914685 XP_032770576 protein-coding 625946775 Ranbp3 RAN binding protein 3 ENCODES a protein that exhibits R-SMAD binding (ortholog); small GTPase binding (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 4 88048590 88086510 + 30032202 116899192 MODEL JAAIVD010000003;XM_032900770;XM_032900771;XM_032900772;XM_032900773;XM_032900775;XM_032900776 XP_032756661;XP_032756662;XP_032756663;XP_032756664;XP_032756666;XP_032756667 ran-binding protein 3 protein-coding 625946808 Sec23b SEC23 homolog B, COPII component ASSOCIATED WITH congenital dyserythropoietic anemia (ortholog); congenital dyserythropoietic anemia type II (ortholog); COVID-19 (ortholog); FOUND IN endomembrane system (ortholog); endoplasmic reticulum (ortholog); perinuclear region of cytoplasm (ortholog) 5 124201399 124239457 + 22301074;30032202 116902049 MODEL JAAIVD010000023;XM_032904335 XP_032760226 SEC23 homolog B, COPII coat complex component;protein transport protein Sec23B protein-coding 625946833 LOC116894975 small nucleolar RNA SNORA20 2 191650368 191650497 + 116894975 MODEL JAAIVD010000001;XR_004387166 snorna 625946836 LOC116903296 vomeronasal type-2 receptor 26-like 6 23899540 23938481 - 22301074;30032202 116903296 MODEL JAAIVD010000024;XM_032905720 XP_032761611 protein-coding 625946844 LOC116886760 5S ribosomal RNA 17 43134846 43134965 - 116886760 MODEL JAAIVD010000011;XR_004386161 rrna 625946847 LOC116890180 mucin-like protein 2 1 259397531 259401095 + 116890180 MODEL JAAIVD010000025;XM_032890915 XP_032746806 protein-coding 625946855 Blvrb biliverdin reductase B ENCODES a protein that exhibits biliverdin reductase [NAD(P)H] activity (ortholog); peptidyl-cysteine S-nitrosylase activity (ortholog); riboflavin reductase (NADPH) activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); bone marrow development (ortholog); cell fate specification (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); esophagus squamous cell carcinoma (ortholog); Stomach Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); terminal bouton (ortholog) 2 168478587 168496334 - 116892430 MODEL JAAIVD010000001;XM_032894115 XP_032750006 flavin reductase (NADPH) protein-coding 625946864 LOC116903930 uncharacterized protein C8orf34 homolog 1 146078704 146189051 + 116903930 MODEL JAAIVD010000025;XM_032906705 XP_032762596 protein-coding 625946871 LOC116904752 small nucleolar RNA SNORA17 6 42652733 42652864 - 116904752 MODEL JAAIVD010000024;XR_004388431 snorna 625946874 LOC116894013 hemoglobin subunit epsilon-like 2 101796875 101798260 + 116894013 MODEL JAAIVD010000001 pseudo 625946875 LOC116892990 zinc finger protein 501-like 1 13371023 13381576 - 116892990 MODEL JAAIVD010000025 pseudo 625946876 LOC116883400 uncharacterized LOC116883400 14 9798040 9805546 - 116883400 MODEL JAAIVD010000009;XR_004385758 ncrna 625946880 Mapk14 mitogen-activated protein kinase 14 ENCODES a protein that exhibits ATP binding (ortholog); enzyme binding (ortholog); kinase activity (ortholog); INVOLVED IN angiogenesis (ortholog); bone development (ortholog); cartilage condensation (ortholog); PARTICIPATES IN eicosanoid signaling pathway; endothelin signaling pathway; erythropoietin signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) 18 5112956 5172783 - 22301074;30032202 116887535 MODEL JAAIVD010000013;XM_032889165;XM_032889166;XM_032889167 XP_032745056;XP_032745057;XP_032745058 protein-coding 625946904 Fcgr2a Fc fragment of IgG receptor IIa ENCODES a protein that exhibits immunoglobulin receptor binding (ortholog); INVOLVED IN nerve development (ortholog); regulation of antibody-dependent cellular cytotoxicity (ortholog); regulation of Fc receptor mediated stimulatory signaling pathway (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); Anaphylaxis (ortholog); arthus reaction (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) 10 50227521 50236874 - 30032202 116911256 MODEL JAAIVD010000005;XM_032915157 XP_032771048 low affinity immunoglobulin gamma Fc region receptor II-a protein-coding 625946913 LOC116888112 torsin-1A-interacting protein 2-like X 100943103 100944558 + 116888112 MODEL JAAIVD010000014 pseudo 625946914 Tmem233 transmembrane protein 233 FOUND IN plasma membrane (ortholog) 16 37747585 37808328 + 22301074;30032202 116885270 MODEL JAAIVD010000004;XM_032886504 XP_032742395 protein-coding 625946919 LOC116904753 U1 spliceosomal RNA 6 137183695 137183825 - 116904753 MODEL JAAIVD010000024 pseudo 625946920 Pmfbp1 polyamine modulated factor 1 binding protein 1 INVOLVED IN gene expression (ortholog); intracellular protein localization (ortholog); protein-containing complex assembly (ortholog); ASSOCIATED WITH oligospermia (ortholog); spermatogenic failure 31 (ortholog); Teratozoospermia (ortholog); FOUND IN cytoplasm (ortholog); sperm flagellum (ortholog); sperm head (ortholog) 17 29213448 29263257 + 30032202 116886282 MODEL JAAIVD010000011;XM_032887708;XM_032887709 XP_032743599;XP_032743600 polyamine-modulated factor 1-binding protein 1 protein-coding 625946947 Safb2 scaffold attachment factor B2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN regulation of androgen receptor signaling pathway (ortholog); Sertoli cell differentiation (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) 4 87929995 87960120 - 22301074;30032202 116899183 MODEL JAAIVD010000003;XM_032900757;XM_032900758;XM_032900759;XM_032900760;XM_032900761;XM_032900763;XM_032900764;XR_004387693;XR_004387694 XP_032756648;XP_032756649;XP_032756650;XP_032756651;XP_032756652;XP_032756654;XP_032756655 protein-coding 625946998 LOC116888438 cilia- and flagella-associated protein 47-like X 37538932 37544910 - 116888438 MODEL JAAIVD010000014;XM_032889712 XP_032745603 protein-coding 625947005 LOC116908729 hepatitis A virus cellular receptor 1 homolog 9 29203540 29217977 + 30032202 116908729 MODEL JAAIVD010000002;XM_032912072 XP_032767963 protein-coding 625947014 Sh3bp4 SH3 domain binding protein 4 ENCODES a protein that exhibits GDP-dissociation inhibitor activity (ortholog); identical protein binding (ortholog); small GTPase binding (ortholog); INVOLVED IN amino acid import (ortholog); cellular response to amino acid stimulus (ortholog); negative regulation of cell growth (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog) 4 161091879 161171481 + 22301074;30032202 116899626 MODEL JAAIVD010000003;XM_032901590 XP_032757481 SH3 domain-binding protein 4 protein-coding 625947024 LOC116896251 zinc finger protein 728-like 3 28376530 28393500 + 30032202 116896251 MODEL JAAIVD010000012;XM_032897322 XP_032753213 protein-coding 625947033 LOC116891296 acylcarnitine hydrolase-like 2 54876066 54882998 - 30032202 116891296 MODEL JAAIVD010000001;XM_032892206 XP_032748097 protein-coding 625947049 Mtx3 metaxin 3 FOUND IN mitochondrion (ortholog) 3 203444554 203452952 - 22301074;30032202 116897296 MODEL JAAIVD010000012;XM_032899031;XM_032899032;XR_004387410 XP_032754922;XP_032754923 metaxin-3 protein-coding 625947067 Det1 DET1 partner of COP1 E3 ubiquitin ligase ENCODES a protein that exhibits protein-containing complex binding (ortholog); ubiquitin protein ligase binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); protein ubiquitination (ortholog); protein-containing complex assembly (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog) 2 121402932 121418711 + 30032202 116891954 MODEL JAAIVD010000001;XM_032893395;XM_032893396 XP_032749286;XP_032749287 DET1 homolog protein-coding 625947082 LOC116915185 small nucleolar RNA SNORA70 13 20500322 20500455 - 116915185 MODEL JAAIVD010000008;XR_004389844 snorna 625947085 LOC116886364 pterin-4-alpha-carbinolamine dehydratase 2 17 14166451 14166933 - 22301074;30032202 116886364 MODEL JAAIVD010000011;XM_032887824 XP_032743715 protein-coding 625947089 Sptbn2 spectrin beta, non-erythrocytic 2 ENCODES a protein that exhibits structural constituent of postsynapse (ortholog); INVOLVED IN adult behavior (ortholog); cellular response to ethanol (ortholog); cerebellar Purkinje cell layer morphogenesis (ortholog); ASSOCIATED WITH autosomal dominant cerebellar ataxia (ortholog); autosomal recessive cerebellar ataxia (ortholog); autosomal recessive spinocerebellar ataxia 14 (ortholog); FOUND IN apical plasma membrane (ortholog); cytosol (ortholog); endosome (ortholog) 2 2910417 2944270 - 22301074;30032202 116890760 MODEL JAAIVD010000001;XM_032891221 XP_032747112 spectrin beta chain, non-erythrocytic 2 protein-coding 625947129 LOC116909432 olfactory receptor 1361-like 9 38720393 38721337 + 22301074;30032202 116909432 MODEL JAAIVD010000002;XM_032913007 XP_032768898 protein-coding 625947132 Tssk6 testis specific serine kinase 6 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); peptidyl-serine phosphorylation (ortholog); protein phosphorylation (ortholog); FOUND IN axonemal microtubule doublet inner sheath (ortholog); sperm flagellum (ortholog) 13 12169493 12173527 + 22301074;30032202 116914540 MODEL JAAIVD010000008;XM_032918871 XP_032774762 testis-specific serine/threonine-protein kinase 6 protein-coding 625947138 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92642690 92642761 + 116904829 MODEL JAAIVD010000024 trna 625947139 LOC116895079 small nucleolar RNA SNORD88 2 155283787 155283876 - 116895079 MODEL JAAIVD010000001;XR_004387248 snorna 625947142 LOC116904258 gamma-glutamylaminecyclotransferase-like 6 33178467 33179086 + 116904258 MODEL JAAIVD010000024 pseudo 625947143 LOC116894761 gastrula zinc finger protein XlCGF17.1-like 2 186007832 186009507 + 30032202 116894761 MODEL JAAIVD010000001;XM_032896425 XP_032752316 protein-coding 625947147 LOC116913785 olfactory receptor 4K2-like 12 72986129 72992966 + 22301074 116913785 MODEL JAAIVD010000007;XM_032918090;XM_032918091 XP_032773981;XP_032773982 protein-coding 625947154 LOC116902964 glucosamine 6-phosphate N-acetyltransferase-like 6 125751110 125751662 + 116902964 MODEL JAAIVD010000024 pseudo 625947155 LOC116900214 uncharacterized LOC116900214 5 53085571 53104228 - 116900214 MODEL JAAIVD010000023;XR_004387926 ncrna 625947160 LOC116907170 olfactory receptor 7G2-like 8 15904136 15905083 - 22301074;30032202 116907170 MODEL JAAIVD010000027;XM_032910125 XP_032766016 protein-coding 625947163 LOC116884460 uncharacterized LOC116884460 15 78917289 78918397 - 22301074 116884460 MODEL JAAIVD010000010;XM_032885560 XP_032741451 uncharacterized protein LOC116884460 protein-coding 625947168 Nfasc neurofascin ENCODES a protein that exhibits protein binding involved in heterotypic cell-cell adhesion (ortholog); protein domain specific binding (ortholog); INVOLVED IN axon guidance (ortholog); clustering of voltage-gated sodium channels (ortholog); myelination (ortholog); ASSOCIATED WITH genetic disease (ortholog); Neurodevelopmental Disorder with Central and Peripheral Motor Dysfunction (ortholog); neuromuscular disease (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); dendrite (ortholog) 10 3104894 3283731 + 30032202 116911368 MODEL JAAIVD010000005;XM_032915297;XM_032915298 XP_032771188;XP_032771189 protein-coding 625947206 Wdr82 WD repeat domain 82 ENCODES a protein that exhibits chromatin binding (ortholog); lncRNA binding (ortholog); INVOLVED IN gene expression (ortholog); lncRNA catabolic process (ortholog); negative regulation of DNA-templated transcription, elongation (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN chromatin (ortholog); chromosome, telomeric region (ortholog); histone methyltransferase complex (ortholog) 8 97479457 97499576 + 22301074;30032202 116907459 MODEL JAAIVD010000027;XM_032910445 XP_032766336 WD repeat-containing protein 82 protein-coding 625947219 LOC116903027 uncharacterized LOC116903027 6 85902381 85912718 + 116903027 MODEL JAAIVD010000024;XR_004388247 ncrna 625947224 Mpp7 MAGUK p55 scaffold protein 7 ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN bicellular tight junction assembly (ortholog); positive regulation of protein-containing complex assembly (ortholog); protein localization to adherens junction (ortholog); ASSOCIATED WITH substance-related disorder (ortholog); FOUND IN adherens junction (ortholog); bicellular tight junction (ortholog); cell junction (ortholog) 14 28543545 28632450 + 22301074;30032202 116883982 MODEL JAAIVD010000009;XM_032885218 XP_032741109 MAGUK p55 subfamily member 7;membrane palmitoylated protein 7 protein-coding 625947242 Hcrtr1 hypocretin receptor 1 ENCODES a protein that exhibits orexin receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN feeding behavior (ortholog); G protein-coupled receptor signaling pathway (ortholog); neuropeptide signaling pathway (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; orexin/hypocretin signaling pathway; orexin/hypocretin signaling pathway via orexin/hypocretin receptor 1; ASSOCIATED WITH Cocaine-Related Disorders (ortholog); withdrawal disorder (ortholog); FOUND IN plasma membrane (ortholog) 1 28009678 28018667 + 22301074;30032202 116886897 MODEL JAAIVD010000025;XM_032888362 XP_032744253 orexin receptor type 1 protein-coding 625947255 LOC116902616 small nucleolar RNA SNORA40 5 25129471 25129595 + 116902616 MODEL JAAIVD010000023;XR_004388195 snorna 625947258 Larp4b La ribonucleoprotein 4B ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); INVOLVED IN positive regulation of 3'-UTR-mediated mRNA stabilization (ortholog); positive regulation of translation (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); myoepithelioma (ortholog); FOUND IN cytoplasmic stress granule (ortholog); cytosol (ortholog) 14 22986259 23064823 - 30032202 116883865 MODEL JAAIVD010000009;XM_032885131 XP_032741022 la-related protein 4B protein-coding 625947280 LOC116897263 uncharacterized LOC116897263 3 199095654 199098182 - 116897263 MODEL JAAIVD010000012;XR_004387408 ncrna 625947285 Sbspon somatomedin B and thrombospondin type 1 domain containing ASSOCIATED WITH Hepatomegaly (ortholog) 1 150248376 150277339 - 116904048 MODEL JAAIVD010000025;XM_032906910 XP_032762801 somatomedin-B and thrombospondin type-1 domain-containing protein protein-coding 625947294 Trim46 tripartite motif containing 46 INVOLVED IN anterograde synaptic vesicle transport (ortholog); axonogenesis (ortholog); microtubule bundle formation (ortholog); FOUND IN axon initial segment (ortholog); main axon (ortholog); proximal neuron projection (ortholog) 3 64430807 64442767 + 22301074 116896657 MODEL JAAIVD010000012;XM_032897993 XP_032753884 tripartite motif-containing protein 46 protein-coding 625947308 Gemin6 gem nuclear organelle associated protein 6 INVOLVED IN spliceosomal snRNP assembly (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Gemini of Cajal bodies (ortholog) 7 12841999 12846510 - 30032202 116905855 MODEL JAAIVD010000026;XM_032908832;XM_032908833 XP_032764723;XP_032764724 gem-associated protein 6 protein-coding 625947318 LOC116915171 U6 spliceosomal RNA 13 35290471 35290577 - 116915171 MODEL JAAIVD010000008;XR_004389832 snrna 625947321 Mtss1 MTSS I-BAR domain containing 1 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); actin monomer binding (ortholog); INVOLVED IN actin filament organization (ortholog); actin filament polymerization (ortholog); adherens junction maintenance (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH non-Hodgkin lymphoma (ortholog); Stomach Neoplasms (ortholog); systemic juvenile rheumatoid arthritis (ortholog); FOUND IN actin cytoskeleton (ortholog); adherens junction (ortholog); cytoplasm (ortholog) 1 233467346 233606645 - 22301074;30032202 116911913 MODEL JAAIVD010000025;XM_032915810;XM_032915814;XM_032915823;XM_032915830;XM_032915837;XM_032915846;XM_032915856;XM_032915863;XM_032915873 XP_032771701;XP_032771705;XP_032771714;XP_032771721;XP_032771728;XP_032771737;XP_032771747;XP_032771754;XP_032771764 protein MTSS 1 protein-coding 625947360 Tzmp1 transition zone microprotein 1 INVOLVED IN cilium assembly (ortholog); FOUND IN ciliary transition zone (ortholog) 1 117932988 117933651 - 116902689 MODEL JAAIVD010000025;XM_032905046 XP_032760937 Smim27 small integral membrane protein 27 APPROVED protein-coding 625947366 LOC116908486 uncharacterized LOC116908486 9 58077165 58092971 + 116908486 MODEL JAAIVD010000002;XR_004388986;XR_004388987 ncrna 625947373 Chfr checkpoint with forkhead and ring finger domains ENCODES a protein that exhibits nucleotide binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN meiotic spindle checkpoint signaling (ortholog); mitotic cell cycle (ortholog); mitotic G2/M transition checkpoint (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; ASSOCIATED WITH Endometrial Neoplasms (ortholog); lung non-small cell carcinoma (ortholog); Stomach Neoplasms (ortholog); FOUND IN nucleus (ortholog); PML body (ortholog) 16 44184968 44217144 - 22301074;30032202 116885588 MODEL JAAIVD010000004;XM_032886889;XM_032886890;XM_032886891 XP_032742780;XP_032742781;XP_032742782 E3 ubiquitin-protein ligase CHFR protein-coding 625947398 Adam30 ADAM metallopeptidase domain 30 FOUND IN external side of plasma membrane (ortholog); sperm head plasma membrane (ortholog) 3 59153770 59155950 - 22301074;30032202 116895392 MODEL JAAIVD010000012;XM_032896682 XP_032752573 disintegrin and metalloproteinase domain-containing protein 30 protein-coding 625947401 Cpne7 copine 7 INVOLVED IN cellular response to calcium ion (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog) 17 42737498 42754100 + 30032202 116886377 MODEL JAAIVD010000011;XM_032887844 XP_032743735 copine-7 protein-coding 625947420 Grm1 glutamate metabotropic receptor 1 ENCODES a protein that exhibits G protein-coupled receptor activity involved in regulation of postsynaptic membrane potential (ortholog); glutamate receptor activity (ortholog); nuclear estrogen receptor binding (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cellular response to electrical stimulus (ortholog); chemical synaptic transmission (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autosomal recessive spinocerebellar ataxia 13 (ortholog); Bone Tissue Neoplasms (ortholog); FOUND IN axon (ortholog); dendriole (ortholog); dendrite (ortholog) 2 226130164 226499428 + 30032202 116893022 MODEL JAAIVD010000001;XM_032894982;XM_032894983 XP_032750873;XP_032750874 metabotropic glutamate receptor 1 protein-coding 625947436 Nckap1 NCK associated protein 1 ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN apical protein localization (ortholog); basal protein localization (ortholog); cell migration involved in gastrulation (ortholog); PARTICIPATES IN E-cadherin signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); developmental and epileptic encephalopathy 11 (ortholog); FOUND IN filamentous actin (ortholog); glutamatergic synapse (ortholog); lamellipodium (ortholog) 5 57681260 57758159 - 30032202 116901567 MODEL JAAIVD010000023;XM_032903563;XM_032903564 XP_032759454;XP_032759455 nck-associated protein 1 protein-coding 625947476 LOC116886933 mortality factor 4-like protein 2 1 217986797 217995091 - 116886933 MODEL JAAIVD010000025 pseudo 625947477 LOC116901108 protein CutA homolog 5 759489 779418 - 22301074;30032202 116901108 MODEL JAAIVD010000023;XM_032902673 XP_032758564 protein-coding 625947487 LOC116887994 pescadillo homolog X 73632479 73634216 - 116887994 MODEL JAAIVD010000014 pseudo 625947488 Hsd17b12 hydroxysteroid 17-beta dehydrogenase 12 ENCODES a protein that exhibits collagen binding (ortholog); fibronectin binding (ortholog); heparin binding (ortholog); INVOLVED IN androgen biosynthetic process (ortholog); extracellular matrix organization (ortholog); fatty acid elongation, saturated fatty acid (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); extracellular matrix (ortholog); fatty acid elongase complex (ortholog) 5 68190715 68314559 - 22301074;30032202 116901659 MODEL JAAIVD010000023;XM_032903770 XP_032759661 very-long-chain 3-oxoacyl-CoA reductase protein-coding 625947503 Fam171a2 family with sequence similarity 171 member A2 ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog) 9 61732174 61742260 - 116909498 MODEL JAAIVD010000002;XM_032913102 XP_032768993 protein FAM171A2 protein-coding 625947515 LOC116899873 small nucleolar RNA SNORA17 4 61678061 61678188 - 116899873 MODEL JAAIVD010000003;XR_004387867 snorna 625947518 Vsig10l2 V-set and immunoglobulin domain containing 10 like 2 8 31049341 31058497 - 30032202 116906625 MODEL JAAIVD010000027;XM_032909385 XP_032765276 V-set and immunoglobulin domain-containing protein 10-like 2 protein-coding 625947532 Rlf RLF zinc finger ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN negative regulation of heterochromatin formation (ortholog); regulation of transcription by RNA polymerase II (ortholog) 1 35815641 35871825 + 30032202 116897198 MODEL JAAIVD010000025;XM_032898904 XP_032754795 zinc finger protein Rlf protein-coding 625947544 Mapda N6-Methyl-AMP deaminase ENCODES a protein that exhibits N6-methyl-AMP deaminase activity (ortholog); INVOLVED IN toxic metabolite repair (ortholog) 5 99285929 99303308 + 30032202 116901852 MODEL JAAIVD010000023;XM_032904043;XM_032904044;XM_032904045 XP_032759934;XP_032759935;XP_032759936 Adal adenosine deaminase like;adenosine deaminase-like protein protein-coding 625947565 Bace1 beta-secretase 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); aspartic-type endopeptidase activity (ortholog); endopeptidase activity (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); amyloid-beta formation (ortholog); amyloid-beta metabolic process (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); Alzheimer's disease (ortholog); Chronic Cerebral Hypoperfusion (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); cytoplasmic vesicle (ortholog) 8 40367908 40392304 + 22301074;30032202 116906705 MODEL JAAIVD010000027;XM_032909509 XP_032765400 protein-coding 625947578 Syk spleen associated tyrosine kinase ENCODES a protein that exhibits ATP binding (ortholog); immunoglobulin receptor binding (ortholog); integrin binding (ortholog); INVOLVED IN amyloid-beta clearance (ortholog); apoptotic signaling pathway (ortholog); B cell receptor signaling pathway (ortholog); PARTICIPATES IN eicosanoid signaling pathway; FasL mediated signaling pathway; Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH anti-basement membrane glomerulonephritis (ortholog); arthritis (ortholog); colitis (ortholog); FOUND IN B cell receptor complex (ortholog); cytoplasm (ortholog); early phagosome (ortholog) 14 70903375 70973626 + 22301074;30032202 116883680 MODEL JAAIVD010000009;XM_032884891 XP_032740782 tyrosine-protein kinase SYK protein-coding 625947596 Syngr1 synaptogyrin 1 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); modulation of chemical synaptic transmission (ortholog); protein targeting (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); prostate cancer (ortholog); schizophrenia (ortholog); FOUND IN cytosol (ortholog); Schaffer collateral - CA1 synapse (ortholog); synaptic vesicle (ortholog) 1 249874240 249881355 + 30032202 116890012 MODEL JAAIVD010000025;XM_032890798 XP_032746689 synaptogyrin-1 protein-coding 625947604 LOC116887164 olfactory receptor 10C1-like 18 10636290 10637261 + 22301074 116887164 MODEL JAAIVD010000013;XM_032888712;XM_032888713 XP_032744603;XP_032744604 protein-coding 625947611 LOC116893999 olfactory receptor 51I2 2 101598082 101599020 - 22301074 116893999 MODEL JAAIVD010000001;XM_032895714 XP_032751605 protein-coding 625947614 Airim AFG2 interacting ribosome maturation factor INVOLVED IN DNA replication (ortholog); regulation of ribosome biogenesis (ortholog); ribosomal large subunit biogenesis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) 1 33359066 33365617 - 30032202 116896825 MODEL JAAIVD010000025;XM_032898306 XP_032754197 C1H1orf109 chromosome 1 C1orf109 homolog;uncharacterized protein C1orf109 homolog protein-coding 625947623 LOC116883435 enoyl-CoA delta isomerase 3, peroxisomal-like 14 53470656 53493009 - 116883435 MODEL JAAIVD010000009;XM_032884574 XP_032740465 protein-coding 625947636 Slc35e4 solute carrier family 35 member E4 11 72919294 72926062 - 30032202 116912069 MODEL JAAIVD010000006;XM_032915933 XP_032771824 protein-coding 625947642 C4H21orf140 chromosome 4 C21orf140 homolog 4 52300854 52303426 + 116897974 MODEL JAAIVD010000003;XM_032899377 XP_032755268 Fam243a family with sequence similarity 243 member A;protein FAM243A protein-coding 625947647 Psip1 PC4 and SRSF1 interacting protein 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); supercoiled DNA binding (ortholog); INVOLVED IN mRNA 5'-splice site recognition (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); response to heat (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); FOUND IN euchromatin (ortholog); heterochromatin (ortholog); nuclear periphery (ortholog) 1 70286741 70318598 + 30032202 116900592 MODEL JAAIVD010000025;XM_032902311;XM_032902317;XM_032902325;XM_032902331;XM_032902339 XP_032758202;XP_032758208;XP_032758216;XP_032758222;XP_032758230 PC4 and SFRS1 interacting protein 1;PC4 and SFRS1-interacting protein protein-coding 625947686 Capn11 calpain 11 FOUND IN acrosomal vesicle (ortholog) 4 84233435 84254251 + 22301074;30032202 116898049 MODEL JAAIVD010000003;XM_032899443 XP_032755334 calpain-11 protein-coding 625947712 Bud13 BUD13 spliceosome associated protein INVOLVED IN mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Achalasia-Progeroid Syndrome (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); U2-type precatalytic spliceosome (ortholog) 8 40795840 40811012 + 30032202 116906800 MODEL JAAIVD010000027;XM_032909672 XP_032765563 BUD13 homolog protein-coding 625947726 LOC116904736 small nucleolar RNA SNORA17 6 64275934 64276063 - 116904736 MODEL JAAIVD010000024;XR_004388425 snorna 625947729 Bcam basal cell adhesion molecule (Lutheran blood group) ENCODES a protein that exhibits laminin binding (ortholog); laminin receptor activity (ortholog); INVOLVED IN cell adhesion (ortholog); cell-matrix adhesion (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) 2 170846265 170860586 + 30032202 116892519 MODEL JAAIVD010000001;XM_032894275 XP_032750166 basal cell adhesion molecule protein-coding 625947748 LOC116906100 peptidyl-prolyl cis-trans isomerase A-like 7 74095200 74137118 - 116906100 MODEL JAAIVD010000026 pseudo 625947749 Armc12 armadillo repeat containing 12 INVOLVED IN flagellated sperm motility (ortholog); positive regulation of cell growth (ortholog); sperm mitochondrial sheath assembly (ortholog); ASSOCIATED WITH prostate cancer (ortholog); spermatogenic failure 90 (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog); nucleus (ortholog) 18 5320902 5331061 - 30032202 116887542 MODEL JAAIVD010000013;XM_032889172;XM_032889173 XP_032745063;XP_032745064 armadillo repeat-containing protein 12 protein-coding 625947763 Pik3r6 phosphoinositide-3-kinase regulatory subunit 6 ENCODES a protein that exhibits 1-phosphatidylinositol-3-kinase regulator activity (ortholog); 1-phosphatidylinositol-4,5-bisphosphate 3-kinase activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); positive regulation of angiogenesis (ortholog); positive regulation of MAP kinase activity (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; insulin signaling pathway; FOUND IN membrane (ortholog); phosphatidylinositol 3-kinase complex, class IB (ortholog) 9 48104295 48153393 + 22301074;30032202 116910174 MODEL JAAIVD010000002;XM_032914034 XP_032769925 phosphoinositide 3-kinase regulatory subunit 6 protein-coding 625947787 Itgb5 integrin subunit beta 5 ENCODES a protein that exhibits integrin binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN cell migration (ortholog); cell-matrix adhesion (ortholog); endodermal cell differentiation (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH systemic juvenile rheumatoid arthritis (ortholog); thyroid gland disease (ortholog); FOUND IN cell leading edge (ortholog); cell surface (ortholog); focal adhesion (ortholog) 4 18625201 18742296 + 30032202 116898797 MODEL JAAIVD010000003;XM_032900148 XP_032756039 integrin beta-5 protein-coding 625947806 Rps3a ribosomal protein S3A ENCODES a protein that exhibits mRNA 5'-UTR binding (ortholog); mRNA binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); positive regulation of fibroblast proliferation (ortholog); positive regulation of translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) 3 67417253 67421590 + 22301074;30032202 116896726 MODEL JAAIVD010000012;XM_032898149 XP_032754040 40S ribosomal protein S3a protein-coding 625947816 LOC116906323 U6 spliceosomal RNA 7 12965344 12965447 - 116906323 MODEL JAAIVD010000026;XR_004388610 snrna 625947819 LOC116908452 small nucleolar RNA SNORD14 8 35404648 35404733 + 116908452 MODEL JAAIVD010000027;XR_004388970 snorna 625947822 Msn moesin ENCODES a protein that exhibits actin binding (ortholog); cell adhesion molecule binding (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN establishment of endothelial barrier (ortholog); establishment of epithelial cell apical/basal polarity (ortholog); gland morphogenesis (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) X 55067745 55092046 + 22301074;30032202 116888623 MODEL JAAIVD010000014;XM_032889921 XP_032745812 protein-coding 625947838 LOC116899894 U1 spliceosomal RNA 4 111092838 111092999 + 116899894 MODEL JAAIVD010000003;XR_004387872 snrna 625947841 LOC116895546 pre-mRNA-processing factor 19-like 3 121225038 121226356 + 116895546 MODEL JAAIVD010000012 pseudo 625947842 LOC116904746 small nucleolar RNA SNORA17 6 111820293 111820410 - 116904746 MODEL JAAIVD010000024 pseudo 625947843 Leprot leptin receptor overlapping transcript ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN negative regulation of growth hormone receptor signaling pathway (ortholog); negative regulation of protein localization to cell surface (ortholog); negative regulation of receptor signaling pathway via JAK-STAT (ortholog); FOUND IN endosome (ortholog); Golgi apparatus (ortholog) 1 52897625 52909699 - 30032202 116899678 MODEL JAAIVD010000025;XM_032901699 XP_032757590 leptin receptor gene-related protein protein-coding 625947851 LOC116883849 40S ribosomal protein S24-like 14 31217994 31218385 + 116883849 MODEL JAAIVD010000009 pseudo 625947852 ATP8 ATP synthase F0 subunit 8 ENCODES a protein that exhibits proton transmembrane transporter activity (inferred); INVOLVED IN ATP biosynthetic process (inferred); monoatomic ion transport (inferred); proton motive force-driven ATP synthesis (inferred); FOUND IN mitochondrial membrane (inferred); proton-transporting ATP synthase complex (inferred) MT 7751 7954 + 7751803 A0A7L7S8S0;B7SE65 REVIEWED EU273707 ABX45237;YP_002791020 protein-coding 625947853 Smpd1 sphingomyelin phosphodiesterase 1 ENCODES a protein that exhibits acid sphingomyelin phosphodiesterase activity (ortholog); phosphatidylcholine phospholipase C activity (ortholog); sphingomyelin phosphodiesterase activity (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); cellular response to UV (ortholog); ceramide biosynthetic process (ortholog); PARTICIPATES IN ceramide signaling pathway; FasL mediated signaling pathway; Trail mediated signaling pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); Gaucher's disease (ortholog); genetic disease (ortholog); FOUND IN endolysosome (ortholog); endosome (ortholog); extracellular region (ortholog) 2 104390759 104394682 + 22301074;30032202 116891819 MODEL JAAIVD010000001;XM_032893181 XP_032749072 sphingomyelin phosphodiesterase protein-coding 625947863 Mmp13 matrix metallopeptidase 13 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); collagen binding (ortholog); INVOLVED IN bone mineralization (ortholog); bone morphogenesis (ortholog); cellular response to fluid shear stress (ortholog); ASSOCIATED WITH alcoholic liver cirrhosis (ortholog); anodontia (ortholog); arteriosclerosis (ortholog); FOUND IN extracellular region (ortholog); intercellular canaliculus (ortholog) 8 3570990 3581262 + 22301074;30032202 116907194 MODEL JAAIVD010000027;XM_032910157 XP_032766048 collagenase 3 protein-coding 625947877 LOC116896069 26S proteasome regulatory subunit 10B-like 3 210200567 210201793 + 116896069 MODEL JAAIVD010000012 pseudo 625947878 LOC116910682 small nucleolar RNA SNORA42/SNORA80 family 9 34734352 34734487 - 116910682 MODEL JAAIVD010000002;XR_004389213 snorna 625947881 LOC116912536 secreted Ly-6/uPAR domain-containing protein 2 1 247485401 247489272 - 30032202 116912536 MODEL JAAIVD010000025;XM_032916641 XP_032772532 protein-coding 625947887 LOC116886141 uncharacterized LOC116886141 1 10008999 10012275 - 116886141 MODEL JAAIVD010000025;XR_004386091 ncrna 625947891 LOC116910257 olfactory receptor 1468-like 9 31650911 31651835 - 116910257 MODEL JAAIVD010000002 pseudo 625947892 Znf322 zinc finger protein 322 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN positive regulation of stem cell population maintenance (ortholog); regulation of DNA-templated transcription (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 14 42351774 42367591 + 30032202 116883551 MODEL JAAIVD010000009;XM_032884722;XM_032884723;XM_032884725;XM_032884726;XM_032884727;XM_032884728;XM_032884729;XM_032884730;XM_032884731 XP_032740613;XP_032740614;XP_032740616;XP_032740617;XP_032740618;XP_032740619;XP_032740620;XP_032740621;XP_032740622 protein-coding 625947927 Ppp1r10 protein phosphatase 1 regulatory subunit 10 ENCODES a protein that exhibits enzyme-substrate adaptor activity (ortholog); protein phosphatase 1 binding (ortholog); protein phosphatase inhibitor activity (ortholog); INVOLVED IN negative regulation of cardiac muscle cell apoptotic process (ortholog); negative regulation of mitotic DNA damage checkpoint (ortholog); negative regulation of transcription elongation by RNA polymerase II (ortholog); FOUND IN chromatin (ortholog); chromosome, telomeric region (ortholog); nuclear body (ortholog) 18 9126461 9141516 + 22301074 116887477 MODEL JAAIVD010000013;XM_032889093;XM_032889094 XP_032744984;XP_032744985 serine/threonine-protein phosphatase 1 regulatory subunit 10 protein-coding 625947956 LOC116900254 60S ribosomal protein L23a-like 1 110865123 110865634 - 116900254 MODEL JAAIVD010000025 pseudo 625947957 LOC116895089 U6atac minor spliceosomal RNA 2 11065367 11065485 - 116895089 MODEL JAAIVD010000001 pseudo 625947958 C1qtnf4 C1q and TNF related 4 INVOLVED IN cell surface receptor signaling pathway via STAT (ortholog); gene expression (ortholog); inflammatory response (ortholog); FOUND IN extracellular region (ortholog) 5 65060756 65065476 + 22301074;30032202 116901601 MODEL JAAIVD010000023;XM_032903627 XP_032759518 complement C1q tumor necrosis factor-related protein 4 protein-coding 625947964 Rnd1 Rho family GTPase 1 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN actin filament organization (ortholog); negative regulation of cell adhesion (ortholog); neuron remodeling (ortholog); FOUND IN actin cytoskeleton (ortholog); adherens junction (ortholog); plasma membrane (ortholog) 1 271495776 271502183 - 22301074;30032202 116884782 MODEL JAAIVD010000025;XM_032886018 XP_032741909 rho-related GTP-binding protein Rho6 protein-coding 625947973 Slc25a31 solute carrier family 25 member 31 INVOLVED IN male meiosis I (ortholog); regulation of mitochondrial membrane permeability (ortholog); spermatogenesis (ortholog); FOUND IN membrane (ortholog); mitochondrial permeability transition pore complex (ortholog); mitochondrion (ortholog) 3 113114885 113130509 - 22301074;30032202 116896909 MODEL JAAIVD010000012;XM_032898469 XP_032754360 ADP/ATP translocase 4 protein-coding 625947983 Ldaf1 lipid droplet assembly factor 1 INVOLVED IN lipid droplet formation (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); lipid droplet (ortholog) 2 81564881 81649743 - 116891589 MODEL JAAIVD010000001;XM_032892768;XM_032892769;XM_032892770;XM_032892771;XM_032892772 XP_032748659;XP_032748660;XP_032748661;XP_032748662;XP_032748663 Tmem159 promethin;transmembrane protein 159 protein-coding 625948002 LOC116911598 SRA stem-loop-interacting RNA-binding protein, mitochondrial-like 10 22374089 22374423 + 116911598 MODEL JAAIVD010000005 pseudo 625948003 Znhit2 zinc finger HIT-type containing 2 2 1628412 1629723 - 116890680 MODEL JAAIVD010000001;XM_032891087 XP_032746978 zinc finger HIT domain-containing protein 2 protein-coding 625948008 Slc6a17 solute carrier family 6 member 17 INVOLVED IN alanine transport (ortholog); brain development (ortholog); glycine transport (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 48 (ortholog); long QT syndrome (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); synapse (ortholog) 3 50740892 50788227 + 22301074;30032202 116896388 MODEL JAAIVD010000012;XM_032897514 XP_032753405 sodium-dependent neutral amino acid transporter SLC6A17 protein-coding 625948024 LOC116898068 adenylate kinase isoenzyme 1 4 88393873 88401753 + 22301074;30032202 116898068 MODEL JAAIVD010000003;XM_032899462 XP_032755353 adenylate kinase isoenzyme 1-like protein-coding 625948032 Tnxb tenascin XB ENCODES a protein that exhibits collagen binding (ortholog); collagen fibril binding (ortholog); heparin binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); cell-matrix adhesion (ortholog); collagen fibril organization (ortholog); ASSOCIATED WITH alcoholic cardiomyopathy (ortholog); Cyanosis (ortholog); Dyspnea (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) 18 7340100 7398384 + 22301074 116887591 MODEL JAAIVD010000013;XM_032889215 XP_032745106 tenascin-X protein-coding 625948076 LOC116900310 olfactory receptor 8H1-like 5 64107339 64108283 - 22301074;30032202 116900310 MODEL JAAIVD010000023;XM_032902066 XP_032757957 protein-coding 625948079 Cenpq centromere protein Q INVOLVED IN metaphase chromosome alignment (ortholog); positive regulation of protein localization to kinetochore (ortholog); FOUND IN nucleoplasm (ortholog) 4 94947257 94959135 + 116898086 MODEL JAAIVD010000003;XM_032899473 XP_032755364 protein-coding 625948090 Anks1a ankyrin repeat and sterile alpha motif domain containing 1A ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN ephrin receptor signaling pathway (ortholog); neuron remodeling (ortholog); substrate-dependent cell migration (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); FOUND IN neuron projection (ortholog) 18 5801131 5949787 - 22301074;30032202 116886852 MODEL JAAIVD010000013;XM_032888303;XM_032888304;XM_032888306;XM_032888307 XP_032744194;XP_032744195;XP_032744197;XP_032744198 ankyrin repeat and SAM domain-containing protein 1A protein-coding 625948128 LOC116887390 olfactory receptor 1361-like 18 10433815 10434744 + 22301074;30032202 116887390 MODEL JAAIVD010000013;XM_032888984 XP_032744875 protein-coding 625948131 LOC116885905 mucin-3A-like 16 16772219 16775199 + 116885905 MODEL JAAIVD010000004;XM_032887221 XP_032743112 protein-coding 625948135 LOC116886662 60S ribosomal protein L10a-like 17 26948213 26948872 - 116886662 MODEL JAAIVD010000011 pseudo 625948136 Krabd3 KRAB domain containing 3 6 92554918 92576498 - 22301074 116903862 MODEL JAAIVD010000024;XM_032906607;XM_032906608;XM_032906609;XM_032906610;XM_032906611 XP_032762498;XP_032762499;XP_032762500;XP_032762501;XP_032762502 Krba1 KRAB-A domain containing 1;protein KRBA1 protein-coding 625948172 Echdc1 ethylmalonyl-CoA decarboxylase 1 ENCODES a protein that exhibits carboxy-lyase activity (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); melanoma (ortholog); short chain acyl-CoA dehydrogenase deficiency (ortholog); FOUND IN cytosol (ortholog) 2 203433136 203465725 - 30032202 116892913 MODEL JAAIVD010000001;XM_032894836;XM_032894837 XP_032750727;XP_032750728 ethylmalonyl-CoA decarboxylase protein-coding 625948185 Trnaa-ugc transfer RNA alanine (anticodon UGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889658 MODEL JAAIVD010000045 trna 625948186 Znf827 zinc finger protein 827 ENCODES a protein that exhibits NuRD complex binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); establishment of protein localization to telomere (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN chromatin (ortholog); chromosome, telomeric region (ortholog); ribonucleoprotein complex (ortholog) 17 20915204 21074807 - 30032202 116886573 MODEL JAAIVD010000011;XM_032888093 XP_032743984 protein-coding 625948202 LOC116906304 5S ribosomal RNA 7 54108018 54108136 - 116906304 MODEL JAAIVD010000026;XR_004388593 rrna 625948205 LOC116893678 olfactory receptor 5AN1-like 2 12342290 12343237 - 22301074;30032202 116893678 MODEL JAAIVD010000001;XM_032895395 XP_032751286 protein-coding 625948208 Tmem219 transmembrane protein 219 2 74997697 75010004 + 116891498 MODEL JAAIVD010000001;XM_032892609;XM_032892610;XM_032892611 XP_032748500;XP_032748501;XP_032748502 insulin-like growth factor-binding protein 3 receptor protein-coding 625948225 LOC116888540 ruvB-like 1 X 3290530 3292076 - 22301074;30032202 116888540 MODEL JAAIVD010000014;XM_032889845 XP_032745736 protein-coding 625948229 Aldh5a1 aldehyde dehydrogenase 5 family member A1 ENCODES a protein that exhibits carboxylic acid binding (ortholog); identical protein binding (ortholog); NAD binding (ortholog); INVOLVED IN central nervous system development (ortholog); GABA catabolic process (ortholog); GABA metabolic process (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; glutamic acid/glutamate metabolic pathway; homocarnosinosis pathway; ASSOCIATED WITH Animal Disease Models (ortholog); autism spectrum disorder (ortholog); dystonia (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 14 43961065 43985374 - 22301074;30032202 116915212 MODEL JAAIVD010000009;XM_032919587 XP_032775478 succinate-semialdehyde dehydrogenase, mitochondrial protein-coding 625948243 Spock3 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 ENCODES a protein that exhibits glycosaminoglycan binding (ortholog); metalloendopeptidase inhibitor activity (ortholog); INVOLVED IN negative regulation of endopeptidase activity (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) 13 25657018 26040478 - 22301074 116914602 MODEL JAAIVD010000008;XM_032918962;XM_032918963;XM_032918964;XM_032918965 XP_032774853;XP_032774854;XP_032774855;XP_032774856 testican-3 protein-coding 625948268 LOC116894704 uncharacterized LOC116894704 2 224287792 224289472 + 116894704 MODEL JAAIVD010000001;XR_004387038 ncrna 625948272 Rfx7 regulatory factor X7 ENCODES a protein that exhibits RNA polymerase II core promoter sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 71 with behavioral abnormalities (ortholog); Familial Prostate Cancer (ortholog); genetic disease (ortholog); FOUND IN nucleus (ortholog) 8 66870517 66951089 + 30032202 116907695 MODEL JAAIVD010000027;XM_032910805;XM_032910806;XM_032910807;XM_032910808 XP_032766696;XP_032766697;XP_032766698;XP_032766699 DNA-binding protein RFX7 protein-coding 625948297 Mei4 meiotic double-stranded break formation protein 4 INVOLVED IN homologous chromosome pairing at meiosis (ortholog); meiotic DNA double-strand break formation (ortholog); oogenesis (ortholog); FOUND IN chromosome (ortholog); lateral element (ortholog) 8 76111971 76279811 + 22301074;30032202 116907047 MODEL JAAIVD010000027;XM_032910002 XP_032765893 meiosis-specific protein MEI4 protein-coding 625948306 LOC116893515 heterogeneous nuclear ribonucleoprotein A1-like 2 191289939 191292146 - 116893515 MODEL JAAIVD010000001 pseudo 625948307 Trdn triadin ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN cytoplasmic microtubule organization (ortholog); endoplasmic reticulum membrane organization (ortholog); heart contraction (ortholog); ASSOCIATED WITH catecholaminergic polymorphic ventricular tachycardia (ortholog); catecholaminergic polymorphic ventricular tachycardia 1 (ortholog); catecholaminergic polymorphic ventricular tachycardia 5 (ortholog); FOUND IN calcium channel complex (ortholog); junctional membrane complex (ortholog); junctional sarcoplasmic reticulum membrane (ortholog) 2 207258965 207567902 + 22301074;30032202 116892933 MODEL JAAIVD010000001;XM_032894871 XP_032750762 protein-coding 625948331 LOC116911724 60S ribosomal protein L29-like 10 25487763 25488209 + 22301074;30032202 116911724 MODEL JAAIVD010000005;XM_032915697 XP_032771588 protein-coding 625948334 Clic3 chloride intracellular channel 3 ENCODES a protein that exhibits chloride channel activity (ortholog); protein-disulfide reductase (glutathione) activity (ortholog); INVOLVED IN chloride transport (ortholog); positive regulation of sprouting angiogenesis (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); nuclear body (ortholog) 5 11724447 11726322 - 116901299 MODEL JAAIVD010000023;XM_032903097 XP_032758988 chloride intracellular channel protein 3 protein-coding 625948344 Prelp proline and arginine rich end leucine rich repeat protein ENCODES a protein that exhibits heparin binding (ortholog); INVOLVED IN cellular senescence (ortholog) 10 1764195 1775828 + 22301074;30032202 116911333 MODEL JAAIVD010000005;XM_032915250 XP_032771141 prolargin protein-coding 625948351 LOC116910746 U2 spliceosomal RNA 9 60913255 60913445 + 116910746 MODEL JAAIVD010000002;XR_004389259 snrna 625948354 LOC116913753 olfactory receptor 2T6-like 12 84029872 84030819 - 22301074 116913753 MODEL JAAIVD010000007;XM_032918061 XP_032773952 protein-coding 625948357 LOC116884570 muscleblind-like protein 3 15 52380855 52381811 - 22301074 116884570 MODEL JAAIVD010000010;XM_032885714 XP_032741605 protein-coding 625948362 Mtnr1b melatonin receptor 1B ENCODES a protein that exhibits melatonin receptor activity (ortholog); INVOLVED IN camera-type eye development (ortholog); glucose homeostasis (ortholog); negative regulation of cytosolic calcium ion concentration (ortholog); ASSOCIATED WITH acute pancreatitis (ortholog); autism spectrum disorder (ortholog); polycystic ovary syndrome (ortholog); FOUND IN plasma membrane (ortholog) 8 11579046 11590453 - 22301074;30032202 116908057 MODEL JAAIVD010000027;XM_032911328 XP_032767219 melatonin receptor type 1B protein-coding 625948366 Pold2 DNA polymerase delta 2, accessory subunit INVOLVED IN DNA biosynthetic process (ortholog); DNA replication (ortholog); DNA-templated DNA replication (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; FOUND IN delta DNA polymerase complex (ortholog); nucleoplasm (ortholog); zeta DNA polymerase complex (ortholog) 11 74829498 74834492 - 22301074;30032202 116912026 MODEL JAAIVD010000006;XM_032915914 XP_032771805 DNA polymerase delta subunit 2 protein-coding 625948380 Tm4sf20 transmembrane 4 L six family member 20 INVOLVED IN negative regulation of proteolysis (ortholog); ASSOCIATED WITH Specific Language Impairment 5 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) 4 155611776 155625978 - 22301074;30032202 116899567 MODEL JAAIVD010000003;XM_032901477 XP_032757368 transmembrane 4 L6 family member 20 protein-coding 625948388 LOC116908063 caspase-3-like 8 49801057 49801777 - 116908063 MODEL JAAIVD010000027 pseudo 625948389 LOC116895091 small nucleolar RNA U13 2 92079738 92079850 + 116895091 MODEL JAAIVD010000001 pseudo 625948390 Zfand4 zinc finger AN1-type containing 4 6 30406326 30468193 - 22301074 116903365 MODEL JAAIVD010000024;XM_032905838;XM_032905839;XM_032905840;XM_032905841;XM_032905843;XM_032905844;XM_032905845 XP_032761729;XP_032761730;XP_032761731;XP_032761732;XP_032761734;XP_032761735;XP_032761736 AN1-type zinc finger protein 4 protein-coding 625948423 LOC116902264 uncharacterized LOC116902264 5 130836466 130838055 - 116902264 MODEL JAAIVD010000023 pseudo 625948424 Lrit2 leucine rich repeat, Ig-like and transmembrane domains 2 13 15539923 15544452 + 22301074 116914228 MODEL JAAIVD010000008;XM_032918423 XP_032774314 leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2 protein-coding 625948429 LOC116908274 60S ribosomal protein L21-like 8 113969081 113969590 + 116908274 MODEL JAAIVD010000027 pseudo 625948430 LOC116886480 40S ribosomal protein S24-like 17 29674737 29675388 - 116886480 MODEL JAAIVD010000011 pseudo 625948431 Shisa7 shisa family member 7 ENCODES a protein that exhibits GABA receptor binding (ortholog); ionotropic glutamate receptor binding (ortholog); INVOLVED IN gamma-aminobutyric acid receptor clustering (ortholog); gamma-aminobutyric acid signaling pathway (ortholog); memory (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); asymmetric, glutamatergic, excitatory synapse (ortholog); glutamatergic synapse (ortholog) 2 177415710 177431277 - 30032202 116892673 MODEL JAAIVD010000001;XM_032894501;XM_032894502;XM_032894503;XM_032894504 XP_032750392;XP_032750393;XP_032750394;XP_032750395 protein shisa-7 protein-coding 625948447 LOC116888231 elongation factor 1-gamma-like 1 78227448 78228746 + 116888231 MODEL JAAIVD010000025 pseudo 625948448 Lrrc45 leucine rich repeat containing 45 INVOLVED IN cilium assembly (ortholog); protein localization to centriolar satellite (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 9 63297290 63305417 - 22301074;30032202 116909833 MODEL JAAIVD010000002;XM_032913550 XP_032769441 leucine-rich repeat-containing protein 45 protein-coding 625948470 Foxo1 forkhead box O1 ENCODES a protein that exhibits beta-catenin binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN apoptotic process (ortholog); blood vessel development (ortholog); cellular response to dexamethasone stimulus (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alveolar rhabdomyosarcoma (ortholog); congestive heart failure (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 3 102101033 102175674 - 30032202 116896884 MODEL JAAIVD010000012;XM_032898429 XP_032754320 forkhead box protein O1 protein-coding 625948476 Purg purine rich element binding protein G FOUND IN synapse (ortholog) 13 53563095 53592721 - 22301074;30032202 116914924 MODEL JAAIVD010000008;XM_032919355;XM_032919356 XP_032775246;XP_032775247 purine-rich element-binding protein gamma protein-coding 625948488 Rrp15 ribosomal RNA processing 15 homolog 10 64860452 64881320 - 30032202 116911433 MODEL JAAIVD010000005;XM_032915403 XP_032771294 RRP15-like protein protein-coding 625948497 Ddx49 DEAD-box helicase 49 ENCODES a protein that exhibits RNA helicase activity (ortholog); INVOLVED IN positive regulation of cell growth (ortholog); regulation of rRNA stability (ortholog); FOUND IN nucleoplasm (ortholog) 13 12552331 12560556 - 22301074 116914544 MODEL JAAIVD010000008;XM_032918876 XP_032774767 probable ATP-dependent RNA helicase DDX49 protein-coding 625948514 LOC116913687 gamma-aminobutyric acid receptor-associated protein-like 2 12 48736758 48737370 - 30032202 116913687 MODEL JAAIVD010000007;XM_032917978 XP_032773869 protein-coding 625948519 LOC116887762 U6 spliceosomal RNA 18 44527022 44527125 + 116887762 MODEL JAAIVD010000013;XR_004386262 snrna 625948522 LOC116898304 heterogeneous nuclear ribonucleoprotein A1-like 4 30852537 30855550 - 116898304 MODEL JAAIVD010000003 pseudo 625948523 LOC116914850 HAUS augmin-like complex subunit 8 13 19750589 19753858 + 116914850 MODEL JAAIVD010000008;XM_032919301 XP_032775192 protein-coding 625948533 LOC116901507 uncharacterized LOC116901507 5 48807734 48821356 - 116901507 MODEL JAAIVD010000023;XR_004388003 ncrna 625948537 Fgf10 fibroblast growth factor 10 ENCODES a protein that exhibits chemoattractant activity (ortholog); fibroblast growth factor receptor binding (ortholog); growth factor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); angiogenesis (ortholog); animal organ formation (ortholog); ASSOCIATED WITH Acute Otitis Media (ortholog); aplasia of lacrimal and salivary glands (ortholog); Breast Neoplasms (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); nucleus (ortholog) 3 177904329 177979537 - 22301074;30032202 116895643 MODEL JAAIVD010000012;XM_032896848 XP_032752739 protein-coding 625948544 Pdk3 pyruvate dehydrogenase kinase 3 ENCODES a protein that exhibits ATP binding (ortholog); protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to fatty acid (ortholog); hypoxia-inducible factor-1alpha signaling pathway (ortholog); peptidyl-serine phosphorylation (ortholog); PARTICIPATES IN pyruvate metabolic pathway; ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease X-linked dominant 6 (ortholog); FOUND IN mitochondrion (ortholog) X 51597009 51664530 + 30032202 116888342 MODEL JAAIVD010000014;XM_032889613 XP_032745504 pyruvate dehydrogenase kinase, isozyme 3 protein-coding 625948561 Pdzd11 PDZ domain containing 11 INVOLVED IN pore complex assembly (ortholog); FOUND IN basolateral plasma membrane (ortholog); cytosol (ortholog); pore complex (ortholog) X 58373128 58376142 - 22301074;30032202 116888426 MODEL JAAIVD010000014;XM_032889696;XM_032889697 XP_032745587;XP_032745588 PDZ domain-containing protein 11 protein-coding 625948575 LOC116899600 alkaline phosphatase, germ cell type-like 4 159208761 159212505 + 30032202 116899600 MODEL JAAIVD010000003;XM_032901546 XP_032757437 protein-coding 625948590 LOC116906104 glyceraldehyde-3-phosphate dehydrogenase-like 7 75734039 75734994 + 116906104 MODEL JAAIVD010000026 pseudo 625948591 Elp6 elongator acetyltransferase complex subunit 6 INVOLVED IN apoptotic process (ortholog); autophagosome maturation (ortholog); autophagy (ortholog); FOUND IN cytosol (ortholog); elongator holoenzyme complex (ortholog); nucleus (ortholog) 8 100891144 100906199 + 22301074;30032202 116907665 MODEL JAAIVD010000027;XM_032910756 XP_032766647 elongator complex protein 6 protein-coding 625948602 LOC116884063 uncharacterized LOC116884063 14 14485400 14595558 - 116884063 MODEL JAAIVD010000009;XR_004385813 ncrna 625948607 LOC116888343 28S ribosomal protein S36, mitochondrial-like X 105284825 105285082 + 30032202 116888343 MODEL JAAIVD010000014;XM_032889614 XP_032745505 protein-coding 625948610 Erfe erythroferrone ENCODES a protein that exhibits hormone activity (ortholog); identical protein binding (ortholog); molecular sequestering activity (ortholog); INVOLVED IN intracellular iron ion homeostasis (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of autophagy (ortholog); FOUND IN extracellular region (ortholog) 4 163362257 163368433 + 30032202 116899638 MODEL JAAIVD010000003;XM_032901633 XP_032757524 protein-coding 625948621 LOC116888205 proteasomal ubiquitin receptor ADRM1-like X 126785345 126811267 - 116888205 MODEL JAAIVD010000014 pseudo 625948622 Lnpep leucyl and cystinyl aminopeptidase ENCODES a protein that exhibits aminopeptidase activity (ortholog); INVOLVED IN negative regulation of cold-induced thermogenesis (ortholog); neuropeptide catabolic process (ortholog); peptide catabolic process (ortholog); PARTICIPATES IN angiotensin IV signaling pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; long term potentiation; ASSOCIATED WITH breast cancer (ortholog); Diabetic Nephropathies (ortholog); Endometrial Neoplasms (ortholog); FOUND IN cell surface (ortholog); cytoplasmic vesicle membrane (ortholog); insulin-responsive compartment (ortholog) 2 101045884 101131711 + 22301074;30032202 116891790 MODEL JAAIVD010000001;XM_032893142 XP_032749033 leucyl-cystinyl aminopeptidase protein-coding 625948644 Hoxc5 homeobox C5 INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic skeletal system development (ortholog); FOUND IN nucleoplasm (ortholog) 1 260066689 260068970 - 22301074;30032202 116883299 MODEL JAAIVD010000025;XM_032884343 XP_032740234 homeobox protein Hox-C5 protein-coding 625948650 Tbc1d5 TBC1 domain family member 5 ENCODES a protein that exhibits AP-2 adaptor complex binding (ortholog); protein-containing complex binding (ortholog); retromer complex binding (ortholog); INVOLVED IN autophagy (ortholog); macroautophagy (ortholog); positive regulation of receptor internalization (ortholog); PARTICIPATES IN retromer-mediated pathway; FOUND IN AP-2 adaptor complex (ortholog); Atg1/ULK1 kinase complex (ortholog); autophagosome (ortholog) 1 57535151 57536183 - 116887754 MODEL JAAIVD010000025;XM_032889319 XP_032745210 protein-coding 625948655 LOC116888566 60S ribosomal protein L32-like X 17947234 17947605 + 22301074;30032202 116888566 MODEL JAAIVD010000014;XM_032889870 XP_032745761 protein-coding 625948658 LOC116904329 uncharacterized LOC116904329 6 64791861 64795354 + 22301074 116904329 MODEL JAAIVD010000024;XM_032907235 XP_032763126 uncharacterized protein LOC116904329 protein-coding 625948663 Ppard peroxisome proliferator activated receptor delta ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN adipose tissue development (ortholog); apoptotic process (ortholog); apoptotic signaling pathway (ortholog); ASSOCIATED WITH Acute-Phase Reaction (ortholog); alcohol-associated liver disease (ortholog); biliary tract cancer (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) 18 5557446 5568796 - 22301074;30032202 116886887 MODEL JAAIVD010000013;XM_032888345 XP_032744236 peroxisome proliferator-activated receptor delta protein-coding 625948673 LOC116885982 U6 spliceosomal RNA 16 35681939 35682045 + 116885982 MODEL JAAIVD010000004;XR_004386061 snrna 625948676 Ubd ubiquitin like modifier D ENCODES a protein that exhibits proteasome binding (ortholog); INVOLVED IN aggresome assembly (ortholog); myeloid dendritic cell differentiation (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH Animal Hepatitis (ortholog); Breast Neoplasms (ortholog); celiac disease (ortholog); FOUND IN aggresome (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 18 10141790 10143677 + 22301074;30032202 116887619 MODEL JAAIVD010000013;XM_032889225 XP_032745116 ubiquitin D protein-coding 625948681 LOC116901349 putative fidgetin-like protein 2 5 14989352 14991057 + 116901349 MODEL JAAIVD010000023 pseudo 625948682 LOC116905681 40S ribosomal protein S26-like 7 50287496 50287831 + 116905681 MODEL JAAIVD010000026 pseudo 625948683 LOC116894335 mas-related G-protein coupled receptor member X1 2 152131259 152132272 + 22301074;30032202 116894335 MODEL JAAIVD010000001;XM_032896027 XP_032751918 protein-coding 625948686 Stxbp6 syntaxin binding protein 6 INVOLVED IN SNARE complex assembly (ortholog); ASSOCIATED WITH autistic disorder (ortholog) 7 58462149 58673001 - 22301074;30032202 116905010 MODEL JAAIVD010000026;XM_032907696;XM_032907697 XP_032763587;XP_032763588 syntaxin-binding protein 6 protein-coding 625948700 Psmb9 proteasome 20S subunit beta 9 ENCODES a protein that exhibits proteasome binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); cellular response to electrical stimulus (ortholog); cellular response to interleukin-1 (ortholog); ASSOCIATED WITH acrodermatitis (ortholog); adult respiratory distress syndrome (ortholog); ankylosing spondylitis (ortholog); FOUND IN cytosol (ortholog); proteasome complex (ortholog); proteasome core complex (ortholog) 18 8139601 8145201 + 22301074 116887432 MODEL JAAIVD010000013;XM_032889047 XP_032744938 proteasome subunit beta type-9 protein-coding 625948710 LOC116909363 thymosin beta-10 9 51768071 51768291 - 22301074;30032202 116909363 MODEL JAAIVD010000002;XM_032912911 XP_032768802 protein-coding 625948715 Nkain1 sodium/potassium transporting ATPase interacting 1 ENCODES a protein that exhibits ATPase binding (ortholog); FOUND IN plasma membrane (ortholog) 1 27709261 27753482 - 30032202 116895913 MODEL JAAIVD010000025;XM_032896991 XP_032752882 sodium/potassium-transporting ATPase subunit beta-1-interacting protein 1 protein-coding 625948725 LOC116893509 multifunctional protein ADE2-like 2 187209152 187211195 + 116893509 MODEL JAAIVD010000001 pseudo 625948726 Bhmt2 betaine--homocysteine S-methyltransferase 2 ENCODES a protein that exhibits betaine-homocysteine S-methyltransferase activity (ortholog); S-methylmethionine-homocysteine S-methyltransferase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN amino-acid betaine metabolic process (ortholog); L-methionine salvage (ortholog); S-adenosylmethionine metabolic process (ortholog); ASSOCIATED WITH cleft lip (ortholog); cleft palate (ortholog); congenital heart disease (ortholog) 3 202659705 202676284 + 22301074;30032202 116895687 MODEL JAAIVD010000012;XM_032896886;XM_032896887;XM_032896888 XP_032752777;XP_032752778;XP_032752779 S-methylmethionine--homocysteine S-methyltransferase BHMT2 protein-coding 625948744 LOC116889672 50S ribosomal protein L10-like 22301074;30032202 116889672 MODEL JAAIVD010000047;XM_032890563 XP_032746454 protein-coding 625948745 Asip agouti signaling protein ENCODES a protein that exhibits receptor antagonist activity (ortholog); type 1 melanocortin receptor binding (ortholog); INVOLVED IN melanin biosynthetic process (ortholog); negative regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); negative regulation of melanin biosynthetic process (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; melanocortin system pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); coat/hair pigmentation trait (ortholog); dermatitis (ortholog); FOUND IN extracellular region (ortholog) 5 134333543 134413382 + 22301074;30032202 116900723 MODEL JAAIVD010000023;LC091042;LC091043;LC091044;LC091045;LC091046;LC091047;LC091048;LC091049;LC091050;LC091051;LC091052;LC091053;LC091054;LC091055;LC091056;LC091057;LC091058;LC091059;LC091060;LC091061;LC091062;LC091063;LC091064;LC091065;LC091066;LC091067;LC091068;LC091069;LC091070;LC091071;LC091072;LC091073;LC091074;LC091075;LC091076;LC091077;LC091078;LC091079;LC091080;LC091081;LC091082;LC091083;LC091084;LC091085;LC091086;LC091087;LC091088;LC091089;LC091090;LC091091;LC091092;LC091093;LC091094;LC091095;LC091096;LC091097;LC091098;LC091099;LC091100;LC091101;LC091102;LC091103;LC091104;LC091105;LC091106;LC091107;LC091108;LC091109;LC091110;LC091111;LC091112;LC091113;LC091114;LC091115;LC091116;LC091117;LC091118;LC091119;LC091120;LC091121;LC091122;LC091123;LC091124;LC091125;LC091126;LC091127;LC091128;LC091129;LC091130;LC091131;LC091132;LC091133;LC091134;LC091135;LC091136;LC091137;LC091138;LC091139;LC091140;LC091141;LC091142;LC091143;LC091144;LC091145;LC091146;LC091147;LC091148;LC091149;LC091150;LC091151;LC091152;LC091153;LC091154;LC091155;LC091156;LC091157;LC091158;LC091159;LC091160;LC091161;LC091162;LC091163;LC091164;LC091173;LC091179;LC091182;LC091186;LC091190;LC091191;LC091193;LC091194;LC091195;LC091196;LC091202;LC091203;LC091204;LC091205;LC091206;XM_032902430 BBB21431;BBB21432;BBB21433;BBB21434;BBB21435;BBB21436;BBB21437;BBB21438;BBB21439;BBB21440;BBB21441;BBB21442;BBB21443;BBB21444;BBB21445;BBB21446;BBB21447;BBB21448;BBB21449;BBB21450;BBB21451;BBB21452;BBB21453;BBB21454;BBB21455;BBB21456;BBB21457;BBB21458;BBB21459;BBB21460;BBB21461;BBB21462;BBB21463;BBB21464;BBB21465;BBB21466;BBB21467;BBB21468;BBB21469;BBB21470;BBB21471;BBB21472;BBB21473;BBB21474;BBB21475;BBB21476;BBB21477;BBB21478;BBB21479;BBB21480;BBB21481;BBB21482;BBB21483;BBB21484;BBB21485;BBB21486;BBB21487;BBB21488;BBB21489;BBB21490;BBB21491;BBB21492;BBB21493;BBB21494;BBB21495;BBB21496;BBB21497;BBB21498;BBB21499;BBB21500;BBB21501;BBB21502;BBB21503;BBB21504;BBB21505;BBB21506;BBB21507;BBB21508;BBB21509;BBB21510;BBB21511;BBB21512;BBB21513;BBB21514;BBB21515;BBB21516;BBB21517;BBB21518;BBB21519;BBB21520;BBB21521;BBB21522;BBB21523;BBB21524;BBB21525;BBB21526;BBB21527;BBB21528;BBB21529;BBB21530;BBB21531;BBB21532;BBB21533;BBB21534;BBB21535;BBB21536;BBB21537;BBB21538;BBB21539;BBB21540;BBB21541;BBB21542;BBB21543;BBB21544;BBB21545;BBB21546;BBB21547;BBB21548;BBB21549;BBB21550;BBB21551;BBB21552;BBB21553;BBB21562;BBB21568;BBB21571;BBB21575;BBB21579;BBB21580;BBB21582;BBB21583;BBB21584;BBB21585;BBB21591;BBB21592;BBB21593;BBB21594;BBB21595;XP_032758321 agouti-signaling protein protein-coding 625948753 LOC116888133 high mobility group protein B1-like X 106031028 106045266 - 116888133 MODEL JAAIVD010000014 pseudo 625948754 Spmap2l sperm microtubule associated protein 2 like 11 33762066 33810703 + 116912556 MODEL JAAIVD010000006;XM_032916658 XP_032772549 Thegl testicular haploid expressed gene protein-like;theg spermatid protein like protein-coding 625948767 LOC116891210 acyl-CoA desaturase 2 2 43816891 43863046 + 30032202 116891210 MODEL JAAIVD010000001;XM_032892042;XM_032892043;XM_032892044 XP_032747933;XP_032747934;XP_032747935 acyl-CoA desaturase 4 protein-coding 625948786 LOC116894245 olfactory receptor 14C36-like 2 114525673 114526665 - 22301074;30032202 116894245 MODEL JAAIVD010000001;XM_032895951 XP_032751842 protein-coding 625948789 Pidd1 p53-induced death domain protein 1 ENCODES a protein that exhibits endopeptidase activity (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); DNA damage response (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 75 (ortholog); developmental and epileptic encephalopathy 3 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 2 8041933 8047822 + 22301074 116890867 MODEL JAAIVD010000001;XM_032891440;XM_032891441;XM_032891442;XM_032891443;XM_032891444;XM_032891445 XP_032747331;XP_032747332;XP_032747333;XP_032747334;XP_032747335;XP_032747336 p53-induced death domain-containing protein 1 protein-coding 625948825 LOC116899615 sorbitol dehydrogenase-like 4 160087221 160089882 - 116899615 MODEL JAAIVD010000003 pseudo 625948826 Snap25 synaptosome associated protein 25 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); lipid binding (ortholog); myosin binding (ortholog); INVOLVED IN associative learning (ortholog); axonogenesis (ortholog); calcium ion-regulated exocytosis of neurotransmitter (ortholog); PARTICIPATES IN insulin secretion pathway; ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); bipolar disorder (ortholog); congenital myasthenic syndrome (ortholog); FOUND IN actin cytoskeleton (ortholog); axon (ortholog); axonal growth cone (ortholog) 5 116317347 116390077 + 22301074;30032202 116902019 MODEL AB003991;AB003992;JAAIVD010000023;XM_032904291;XM_032904292 BAA20151;BAA20152;XP_032760182;XP_032760183 SNAP-25A;SNAP-25B synaptosomal-associated protein 25 protein-coding 625948842 LOC116893911 pyruvate kinase PKM-like 2 78244303 78245919 - 116893911 MODEL JAAIVD010000001 pseudo 625948843 LOC116893180 MLV-related proviral Env polyprotein-like 2 103624338 103626151 - 116893180 MODEL JAAIVD010000001;XM_032895085 XP_032750976 protein-coding 625948848 LOC116887837 cilia- and flagella-associated protein 47-like X 38021726 38097048 + 116887837 MODEL JAAIVD010000014;XM_032889348 XP_032745239 protein-coding 625948872 Pdia4 protein disulfide isomerase family A member 4 ENCODES a protein that exhibits integrin binding (ortholog); protein disulfide isomerase activity (ortholog); protein-disulfide reductase activity (ortholog); INVOLVED IN blood coagulation, fibrin clot formation (ortholog); platelet aggregation (ortholog); positive regulation of protein folding (ortholog); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway; FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum chaperone complex (ortholog) 6 93067190 93087229 + 22301074;30032202 116903878 MODEL JAAIVD010000024;XM_032906630 XP_032762521 protein disulfide-isomerase A4 protein-coding 625948886 Myh15 myosin heavy chain 15 INVOLVED IN extraocular skeletal muscle development (ortholog); ASSOCIATED WITH Coronary Disease (ortholog); stroke (ortholog) 4 33550374 33686278 + 22301074 116898311 MODEL JAAIVD010000003;XM_032899654 XP_032755545 myosin-15 protein-coding 625948930 LOC116895157 40S ribosomal protein S7-like 3 6841679 6844309 + 116895157 MODEL JAAIVD010000012 pseudo 625948931 Fam163a family with sequence similarity 163 member A 10 35495839 35500462 - 116911430 MODEL JAAIVD010000005;XM_032915399 XP_032771290 protein FAM163A protein-coding 625948937 LOC116912548 cytochrome P450 11B1, mitochondrial-like 1 247578358 247584127 - 22301074;30032202 116912548 MODEL JAAIVD010000025;XM_032916652 XP_032772543 protein-coding 625948949 LOC116908214 igE-binding protein-like 8 72778682 72780542 + 22301074 116908214 MODEL JAAIVD010000027;XM_032911489 XP_032767380 protein-coding 625948953 Mycbpap MYCBP associated protein INVOLVED IN acrosome assembly (ortholog); chemical synaptic transmission (ortholog); flagellated sperm motility (ortholog); FOUND IN acrosomal vesicle (ortholog); axonemal central apparatus (ortholog); cytoplasm (ortholog) 9 51018964 51039520 + 116910122 A0A8A1UD10 MODEL JAAIVD010000002;XM_032913956 XP_032769847 MYCBP-associated protein protein-coding 625948976 Renbp renin binding protein ENCODES a protein that exhibits ATP binding (ortholog); enzyme inhibitor activity (ortholog); identical protein binding (ortholog); INVOLVED IN N-acetylglucosamine metabolic process (ortholog); N-acetylmannosamine metabolic process (ortholog); negative regulation of catalytic activity (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; renin-angiotensin cascade pathway; ASSOCIATED WITH COVID-19 (ortholog); dilated cardiomyopathy (ortholog) X 128651841 128661203 + 22301074;30032202 116888664 MODEL JAAIVD010000014;XM_032889959 XP_032745850 N-acylglucosamine 2-epimerase protein-coding 625948991 LOC116902651 small nucleolar RNA U3 5 57810201 57810271 + 116902651 MODEL JAAIVD010000023 pseudo 625948992 Git1 GIT ArfGAP 1 ENCODES a protein that exhibits gamma-tubulin binding (ortholog); GTPase activator activity (ortholog); identical protein binding (ortholog); INVOLVED IN brain development (ortholog); cell redox homeostasis (ortholog); cellular response to epidermal growth factor stimulus (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; E-cadherin signaling pathway; ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); genetic disease (ortholog); Huntington's disease (ortholog); FOUND IN calyx of Held (ortholog); centrosome (ortholog); cytosol (ortholog) 9 96161073 96178792 + 22301074;30032202 116910395 MODEL JAAIVD010000002;XM_032914234 XP_032770125 ARF GTPase-activating protein GIT1 protein-coding 625949016 LOC116889457 U7 small nuclear RNA X 59522607 59522668 - 116889457 MODEL JAAIVD010000014;XR_004386414 snrna 625949019 Tnfsf14 TNF superfamily member 14 ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity involved in apoptotic process (ortholog); identical protein binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); positive regulation of myoblast differentiation (ortholog); positive regulation of myoblast fusion (ortholog); ASSOCIATED WITH IgA glomerulonephritis (ortholog); multiple sclerosis (ortholog); rheumatoid arthritis (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) 4 88591968 88596286 - 22301074 116898072 MODEL JAAIVD010000003;XM_032899467 XP_032755358 tumor necrosis factor ligand superfamily member 14 protein-coding 625949026 LOC116911324 ubiquitin-conjugating enzyme E2 C-like 10 908437 911014 + 116911324 MODEL JAAIVD010000005 pseudo 625949027 Sptlc3 serine palmitoyltransferase long chain base subunit 3 ENCODES a protein that exhibits serine C-palmitoyltransferase activity (ortholog); INVOLVED IN sphingoid biosynthetic process (ortholog); sphingosine biosynthetic process (ortholog); ASSOCIATED WITH sensory peripheral neuropathy (ortholog); FOUND IN serine palmitoyltransferase complex (ortholog) 5 118853278 118963997 + 22301074;30032202 116902025 MODEL JAAIVD010000023;XM_032904299 XP_032760190 serine palmitoyltransferase 3 protein-coding 625949043 LOC116904808 U6 spliceosomal RNA 6 83185119 83185225 - 116904808 MODEL JAAIVD010000024;XR_004388459 snrna 625949046 Gimap8 GTPase, IMAP family member 8 INVOLVED IN regulation of T cell apoptotic process (ortholog); ASSOCIATED WITH autistic disorder (ortholog) 6 92310186 92322247 - 22301074;30032202 116903849 MODEL JAAIVD010000024;XM_032906581 XP_032762472 GTPase IMAP family member 8 protein-coding 625949055 Foxp1 forkhead box P1 ENCODES a protein that exhibits chromatin binding (ortholog); core promoter sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN cardiac muscle cell differentiation (ortholog); cellular response to ionomycin (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH atrial heart septal defect 1 (ortholog); atrioventricular septal defect (ortholog); autism spectrum disorder (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 6 47758791 48147167 + 30032202 116903469 MODEL JAAIVD010000024;XM_032906021;XM_032906022;XM_032906023;XM_032906024;XM_032906025;XM_032906026;XM_032906028;XM_032906029;XM_032906030;XM_032906031 XP_032761912;XP_032761913;XP_032761914;XP_032761915;XP_032761916;XP_032761917;XP_032761919;XP_032761920;XP_032761921;XP_032761922 forkhead box protein P1 protein-coding 625949101 LOC116900751 uncharacterized LOC116900751 1 75852995 76074466 + 116900751 MODEL JAAIVD010000025;XR_004387948 ncrna 625949106 Ube2v1 ubiquitin conjugating enzyme E2 V1 ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin conjugating enzyme binding (ortholog); INVOLVED IN error-free postreplication DNA repair (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of intracellular signal transduction (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; Toll-like receptor signaling pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) 5 150375315 150398789 + 30032202 116902309 MODEL JAAIVD010000023;XM_032904753 XP_032760644 ubiquitin-conjugating enzyme E2 variant 1 protein-coding 625949114 Tmcc1 transmembrane and coiled-coil domain family 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN endoplasmic reticulum organization (ortholog); endosomal transport (ortholog); endosome fission (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum-endosome membrane contact site (ortholog); rough endoplasmic reticulum (ortholog) 6 30578995 30709165 + 30032202 116903372 MODEL JAAIVD010000024;XM_032905857;XM_032905858;XM_032905859 XP_032761748;XP_032761749;XP_032761750 transmembrane and coiled-coil domains protein 1 protein-coding 625949127 Vcpip1 valosin containing protein interacting protein 1 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); INVOLVED IN DNA damage response (ortholog); endoplasmic reticulum membrane fusion (ortholog); Golgi organization (ortholog); ASSOCIATED WITH progeria (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 1 144457029 144487849 - 30032202 116903843 MODEL JAAIVD010000025;XM_032906572 XP_032762463 deubiquitinating protein VCIP135 protein-coding 625949134 LOC116910876 transmembrane epididymal protein 1-like 10 33302262 33303170 + 116910876 MODEL JAAIVD010000005;XM_032914641 XP_032770532 protein-coding 625949137 Btbd17 BTB domain containing 17 9 74524589 74530206 + 22301074 116909649 MODEL JAAIVD010000002;XM_032913302 XP_032769193 BTB/POZ domain-containing protein 17 protein-coding 625949144 Cdk5r2 cyclin dependent kinase 5 regulatory subunit 2 ENCODES a protein that exhibits actin binding (ortholog); cyclin-dependent protein serine/threonine kinase activator activity (ortholog); INVOLVED IN cerebellum development (ortholog); hippocampus development (ortholog); layer formation in cerebral cortex (ortholog); FOUND IN cytoplasm (ortholog); growth cone (ortholog); membrane (ortholog) 4 148279620 148282082 + 22301074;30032202 116899514 MODEL JAAIVD010000003;XM_032901369 XP_032757260 cyclin-dependent kinase 5 activator 2 protein-coding 625949149 LOC116905624 splicing factor 3B subunit 4-like 7 19241511 19286001 + 116905624 MODEL JAAIVD010000026 pseudo 625949150 Ehbp1l1 EH domain binding protein 1 like 1 INVOLVED IN cell morphogenesis (ortholog); enucleation (ortholog); erythrocyte differentiation (ortholog); ASSOCIATED WITH Hydrops Fetalis (ortholog) 2 1967998 1987628 + 22301074 116890700 MODEL JAAIVD010000001;XM_032891124;XM_032891125;XM_032891126;XM_032891127;XM_032891128 XP_032747015;XP_032747016;XP_032747017;XP_032747018;XP_032747019 EH domain-binding protein 1-like protein 1 protein-coding 625949182 Naa40 N-alpha-acetyltransferase 40, NatD catalytic subunit ENCODES a protein that exhibits histone H2A acetyltransferase activity (ortholog); histone H4 acetyltransferase activity (ortholog); protein N-terminal-serine acetyltransferase activity (ortholog); INVOLVED IN lipid metabolic process (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 2 553939 568778 + 30032202 116894799 MODEL JAAIVD010000001;XM_032896459;XM_032896460 XP_032752350;XP_032752351 N-alpha-acetyltransferase 40 protein-coding 625949200 LOC116904721 small nucleolar RNA SNORA17 6 29862590 29862724 + 116904721 MODEL JAAIVD010000024;XR_004388414 snorna 625949203 LOC116901953 uncharacterized LOC116901953 1 100103416 100104671 - 116901953 MODEL JAAIVD010000025 pseudo 625949204 LOC116894916 U7 small nuclear RNA 2 103895932 103895979 + 116894916 MODEL JAAIVD010000001 pseudo 625949205 LOC116904467 EF-hand calcium-binding domain-containing protein 1-like 6 135851501 135861151 + 22301074;30032202 116904467 MODEL JAAIVD010000024;XM_032907279 XP_032763170 protein-coding 625949213 Defb123 defensin beta 123 5 131929909 131940065 + 22301074 116900701 MODEL JAAIVD010000023;XM_032902404 XP_032758295 beta-defensin 123 protein-coding 625949219 Map3k7 mitogen-activated protein kinase kinase kinase 7 ENCODES a protein that exhibits ATP binding (ortholog); DNA-binding transcription factor binding (ortholog); histone kinase activity (ortholog); INVOLVED IN angiogenesis (ortholog); anoikis (ortholog); bone development (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; c-Jun N-terminal kinases MAPK signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH arteriosclerosis (ortholog); benign hypertensive renal disease (ortholog); brain edema (ortholog); FOUND IN ATAC complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 111003753 111061041 - 22301074;30032202 116902406 MODEL JAAIVD010000025;XM_032904939 XP_032760830 protein-coding 625949240 LOC116902951 vomeronasal type-1 receptor 101-like 6 124151832 124152764 - 116902951 MODEL JAAIVD010000024 pseudo 625949241 Ifng interferon gamma ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN adaptive immune response (ortholog); antigen processing and presentation (ortholog); apoptotic process (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-2 signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acquired immunodeficiency syndrome (ortholog); acute disseminated encephalomyelitis (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog); perikaryon (ortholog) 1 196395380 196400033 + 22301074;30032202 116890029 MODEL JAAIVD010000025;XM_032890807 XP_032746698 protein-coding 625949249 LOC116895763 60S ribosomal protein L5-like 3 45903750 45904412 + 116895763 MODEL JAAIVD010000012 pseudo 625949250 LOC116885610 transmembrane protein 132D-like 16 25979537 26090534 + 116885610 MODEL JAAIVD010000004;XM_032886911 XP_032742802 protein-coding 625949256 Eef1a1 eukaryotic translation elongation factor 1 alpha 1 ENCODES a protein that exhibits calmodulin binding (ortholog); GTPase activity (ortholog); heterocyclic compound binding (ortholog); INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); cellular response to nerve growth factor stimulus (ortholog); cellular response to xenobiotic stimulus (ortholog); PARTICIPATES IN chaperone mediated autophagy pathway; translation elongation pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); Burns (ortholog); carcinoma (ortholog); FOUND IN cortical actin cytoskeleton (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 72664717 72668811 - 22301074;30032202 116906562 MODEL JAAIVD010000027;XM_032909275 XP_032765166 elongation factor 1-alpha 1 protein-coding 625949268 LOC116904516 transcription factor BTF3-like 6 6926702 6927501 - 116904516 MODEL JAAIVD010000024 pseudo 625949269 LOC116899888 small nucleolar RNA SNORA17 4 134243968 134244067 + 116899888 MODEL JAAIVD010000003 pseudo 625949270 LOC116913706 olfactory receptor 11G2-like 12 72777981 72778937 - 22301074 116913706 MODEL JAAIVD010000007;XM_032918001 XP_032773892 protein-coding 625949274 Pex39 peroxisomal biogenesis factor 39 ENCODES a protein that exhibits peroxisome matrix targeting signal-2 binding (ortholog); INVOLVED IN protein import into peroxisome matrix, docking (ortholog); FOUND IN cytosol (ortholog) 4 83092979 83093929 - 116898044 MODEL JAAIVD010000003;XM_032899437 XP_032755328 C4H6orf226 chromosome 4 C6orf226 homolog;uncharacterized protein C6orf226 homolog protein-coding 625949279 LOC116888152 synaptophysin-like protein 1 X 112156996 112157694 - 116888152 MODEL JAAIVD010000014 pseudo 625949280 LOC116902866 taste receptor type 2 member 143 6 97818597 97819481 - 22301074;30032202 116902866 MODEL JAAIVD010000024;XM_032905196 XP_032761087 protein-coding 625949283 LOC116911159 cold shock domain-containing protein E1-like 10 45318022 45320440 + 116911159 MODEL JAAIVD010000005 pseudo 625949284 LOC116893205 heat shock cognate 71 kDa protein-like 2 108011293 108013277 + 116893205 MODEL JAAIVD010000001 pseudo 625949285 Pax7 paired box 7 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN cartilage development (ortholog); chromatin remodeling (ortholog); dorsal/ventral neural tube patterning (ortholog); ASSOCIATED WITH alveolar rhabdomyosarcoma (ortholog); congenital myopathy 19 (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN nucleus (ortholog) 1 18341378 18437923 + 22301074;30032202 116886498 MODEL JAAIVD010000025;XM_032888005;XM_032888012 XP_032743896;XP_032743903 paired box protein Pax-7 protein-coding 625949298 Cst7 cystatin F ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (ortholog); peptidase inhibitor activity (ortholog); protease binding (ortholog); INVOLVED IN lysosomal protein catabolic process (ortholog); negative regulation of microglial cell activation (ortholog); positive regulation of myelination (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Stomach Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); endoplasmic reticulum (ortholog) 5 130280349 130288717 + 22301074;30032202 116902094 MODEL JAAIVD010000023;XM_032904391 XP_032760282 cystatin-F protein-coding 625949306 Golt1b golgi transport 1B INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); FOUND IN endoplasmic reticulum (ortholog); protein-containing complex (ortholog) 6 141095 154136 + 30032202 116903065 MODEL JAAIVD010000024;XM_032905364;XM_032905365 XP_032761255;XP_032761256 vesicle transport protein GOT1B protein-coding 625949321 LOC116893317 elongin-B-like 2 152396047 152396430 - 116893317 MODEL JAAIVD010000001 pseudo 625949322 Prokr1 prokineticin receptor 1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Hirschsprung's disease (ortholog); Hyperalgesia (ortholog); long QT syndrome (ortholog) 6 58736545 58744462 + 22301074;30032202 116902739 MODEL JAAIVD010000024;XM_032905086 XP_032760977 protein-coding 625949328 Klhdc8a kelch domain containing 8A 10 3539933 3547039 - 22301074 116911288 MODEL JAAIVD010000005;XM_032915195 XP_032771086 kelch domain-containing protein 8A protein-coding 625949337 LOC116905027 ATP synthase F(0) complex subunit C1, mitochondrial-like 7 64245130 64245528 - 22301074;30032202 116905027 MODEL JAAIVD010000026;XM_032907707 XP_032763598 protein-coding 625949340 Gipr gastric inhibitory polypeptide receptor ENCODES a protein that exhibits gastric inhibitory peptide receptor activity (ortholog); glucagon family peptide binding (ortholog); peptide hormone binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); desensitization of G protein-coupled receptor signaling pathway (ortholog); endocrine pancreas development (ortholog); ASSOCIATED WITH Body Weight (ortholog); cardiovascular system disease (ortholog); diabetes mellitus (ortholog); FOUND IN plasma membrane (ortholog) 2 171456774 171466794 + 22301074;30032202 116892546 MODEL JAAIVD010000001;XM_032894315 XP_032750206 protein-coding 625949359 Frmpd1 FERM and PDZ domain containing 1 INVOLVED IN establishment of protein localization to membrane (ortholog); light adaption (ortholog); protein transport (ortholog); ASSOCIATED WITH Experimental Mammary Neoplasms (ortholog); hepatoblastoma (ortholog); FOUND IN cell cortex (ortholog); plasma membrane (ortholog); protein-containing complex (ortholog) 1 1225115 1324055 - 22301074 116890804 MODEL JAAIVD010000025;XM_032891292 XP_032747183 FERM and PDZ domain-containing protein 1 protein-coding 625949379 LOC116902153 E3 ubiquitin-protein ligase RBX1 5 133129561 133130058 - 22301074;30032202 116902153 MODEL JAAIVD010000023;XM_032904487 XP_032760378 protein-coding 625949384 LOC116897520 small nucleolar RNA SNORA48 3 122699123 122699265 + 116897520 MODEL JAAIVD010000012;XR_004387536 snorna 625949387 Hapln2 hyaluronan and proteoglycan link protein 2 INVOLVED IN establishment of blood-nerve barrier (ortholog); extracellular matrix assembly (ortholog); ASSOCIATED WITH Craniosynostosis Syndrome, Autosomal Recessive (ortholog); FOUND IN extracellular matrix (ortholog); gel phase of interstitial matrix (ortholog); node of Ranvier (ortholog) 3 65529623 65535055 + 22301074 116896704 MODEL JAAIVD010000012;XM_032898112;XM_032898113 XP_032754003;XP_032754004 protein-coding 625949402 Nup54 nucleoporin 54 ENCODES a protein that exhibits identical protein binding (ortholog); protein-containing complex binding (ortholog); structural constituent of nuclear pore (ortholog); INVOLVED IN nucleocytoplasmic transport (ortholog); protein targeting (ortholog); regulation of protein import into nucleus (ortholog); PARTICIPATES IN mRNA nuclear export pathway; ASSOCIATED WITH dystonia 37, early-onset with striatal lesions (ortholog); FOUND IN nuclear envelope (ortholog); nuclear pore (ortholog); protein-containing complex (ortholog) 11 5267705 5285647 - 30032202 116912463 MODEL JAAIVD010000006;XM_032916529;XM_032916530 XP_032772420;XP_032772421 nucleoporin p54 protein-coding 625949422 Stc2 stanniocalcin 2 ENCODES a protein that exhibits enzyme binding (ortholog); heme binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); cellular response to hypoxia (ortholog); decidualization (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); endometriosis (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); perinuclear region of cytoplasm (ortholog) 9 4525493 4535955 + 22301074;30032202 116909588 MODEL JAAIVD010000002;XM_032913211 XP_032769102 stanniocalcin-2 protein-coding 625949430 LOC116887972 splicing factor 3A subunit 2-like X 66622324 66623401 + 116887972 MODEL JAAIVD010000014 pseudo 625949431 LOC116889083 F-actin-capping protein subunit alpha-1-like X 27140108 27141010 - 22301074;30032202 116889083 MODEL JAAIVD010000014;XM_032890259 XP_032746150 protein-coding 625949434 C9H17orf67 chromosome 9 C17orf67 homolog 9 81697609 81719034 - 116909959 MODEL JAAIVD010000002;XM_032913734 XP_032769625 uncharacterized protein C17orf67 homolog protein-coding 625949442 Pcnt pericentrin INVOLVED IN brain morphogenesis (ortholog); camera-type eye development (ortholog); cerebellar cortex morphogenesis (ortholog); PARTICIPATES IN protein kinase C (PKC) signaling pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); Down syndrome (ortholog); genetic disease (ortholog); FOUND IN centriolar satellite (ortholog); centriole (ortholog); centrosome (ortholog) 8 106693360 106777712 + 30032202 116907862 MODEL JAAIVD010000027;XM_032911050 XP_032766941 protein-coding 625949486 Cpa6 carboxypeptidase A6 ASSOCIATED WITH benign epilepsy with centrotemporal spikes (ortholog); Confusion (ortholog); Developmental Disabilities (ortholog) 1 145099494 145423244 - 22301074;30032202 116889696 MODEL JAAIVD010000025;XM_032890585 XP_032746476 protein-coding 625949500 LOC116899053 uncharacterized LOC116899053 4 68901910 68915640 - 116899053 MODEL JAAIVD010000003;XR_004387685;XR_004387686 ncrna 625949508 Cfap97d2 CFAP97 domain containing 2 13 69977949 69994085 - 116914644 MODEL JAAIVD010000008;XM_032919038 XP_032774929 uncharacterized protein CFAP97D2 protein-coding 625949514 LOC116905398 60S ribosomal protein L6-like 7 119430443 119431370 - 116905398 MODEL JAAIVD010000026;XR_004388521 pseudo 625949517 LOC116896821 vomeronasal type-2 receptor 1 3 91175012 91214690 - 22301074;30032202 116896821 MODEL JAAIVD010000012;XM_032898298 XP_032754189 protein-coding 625949527 LOC116907197 uncharacterized LOC116907197 1 159609808 159615718 + 22301074 116907197 MODEL JAAIVD010000025;XM_032910159 XP_032766050 uncharacterized protein LOC116907197 protein-coding 625949532 LOC116886017 small nucleolar RNA SNORA81 16 24006095 24006274 + 116886017 MODEL JAAIVD010000004;XR_004386086 snorna 625949535 Uggt1 UDP-glucose glycoprotein glucosyltransferase 1 ENCODES a protein that exhibits UDP-glucose:glycoprotein glucosyltransferase activity (ortholog); unfolded protein binding (ortholog); INVOLVED IN protein secretion (ortholog); ASSOCIATED WITH Congenital disorder of glycosylation, type IICC (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) 4 112346168 112456592 - 22301074;30032202 116899284 MODEL JAAIVD010000003;XM_032900915 XP_032756806 UDP-glucose:glycoprotein glucosyltransferase 1 protein-coding 625949580 LOC116889514 small nucleolar RNA SNORA17 X 35127910 35128040 + 116889514 MODEL JAAIVD010000014;XR_004386458 snorna 625949583 Cdh20 cadherin 20 ASSOCIATED WITH syndactyly (ortholog) 10 90758174 91015616 - 22301074;30032202 116911752 MODEL JAAIVD010000005;XM_032915745;XM_032915746 XP_032771636;XP_032771637 cadherin-20 protein-coding 625949602 LOC116898103 interleukin-17A 4 98034251 98037758 + 22301074 116898103 MODEL JAAIVD010000003;XM_032899488 XP_032755379 protein-coding 625949609 Cimap1a ciliary microtubule associated protein 1A INVOLVED IN flagellated sperm motility (ortholog); FOUND IN outer dense fiber (ortholog); sperm flagellum (ortholog) 2 8636015 8638682 - 30032202 116890900 MODEL JAAIVD010000001;XM_032891521 XP_032747412 Odf3 outer dense fiber of sperm tails 3;outer dense fiber protein 3 protein-coding 625949618 LOC116893474 sperm motility kinase X-like 2 180342659 180355891 - 116893474 MODEL JAAIVD010000001 pseudo 625949619 Ppfia1 PPFI scaffold protein A1 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN cortical microtubule organization (ortholog); negative regulation of protein localization to plasma membrane (ortholog); negative regulation of stress fiber assembly (ortholog); FOUND IN axon (ortholog); cell cortex (ortholog); cytosol (ortholog) 2 5170493 5248788 + 22301074;30032202 116890821 MODEL JAAIVD010000001;XM_032891320;XM_032891321;XM_032891322;XM_032891323;XM_032891324;XM_032891325 XP_032747211;XP_032747212;XP_032747213;XP_032747214;XP_032747215;XP_032747216 PTPRF interacting protein alpha 1;liprin-alpha-1 protein-coding 625949663 LOC116884878 60S ribosomal protein L18-like 15 12890404 12910789 - 116884878 MODEL JAAIVD010000010 pseudo 625949664 Fst follistatin ENCODES a protein that exhibits activin binding (ortholog); activin receptor antagonist activity (ortholog); heparan sulfate proteoglycan binding (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cellular response to growth factor stimulus (ortholog); female gonad development (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); Brain Hypoxia-Ischemia (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 3 182255109 182261254 + 22301074;30032202 116895646 MODEL JAAIVD010000012;XM_032896850;XM_032896851 XP_032752741;XP_032752742 protein-coding 625949677 Cfap68 cilia and flagella associated protein 68 INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axoneme (ortholog); cilium (ortholog) 8 45230509 45235319 - 22301074 116907645 MODEL JAAIVD010000027;XM_032910712;XM_032910713;XM_032910714 XP_032766603;XP_032766604;XP_032766605 C8H11orf1 UPF0686 protein C11orf1 homolog;chromosome 8 C11orf1 homolog protein-coding 625949688 LOC116893460 zinc finger protein 773-like 2 178995623 179002203 - 30032202 116893460 MODEL JAAIVD010000001;XM_032895221 XP_032751112 protein-coding 625949697 LOC116912963 small Cajal body-specific RNA 16 11 75346671 75346857 - 116912963 MODEL JAAIVD010000006;XR_004389530 ncrna 625949700 Zg16b zymogen granule protein 16B ENCODES a protein that exhibits proteoglycan binding (ortholog); INVOLVED IN cell migration (ortholog); defense response to bacterium (ortholog); positive regulation of angiogenesis (ortholog); FOUND IN apicolateral plasma membrane (ortholog); cytoplasm (ortholog); extracellular region (ortholog) 9 1243464 1255841 - 30032202 116909667 MODEL JAAIVD010000002;XM_032913321 XP_032769212 zymogen granule protein 16 homolog B protein-coding 625949707 LOC116889675 translation initiation factor IF-2-like 22301074;30032202 116889675 MODEL JAAIVD010000048;XM_032890565 XP_032746456 protein-coding 625949708 LOC116911851 small nucleolar RNA SNORD19 10 1211232 1211292 - 116911851 MODEL JAAIVD010000005;XR_004389374 snorna 625949711 Iapp islet amyloid polypeptide ENCODES a protein that exhibits hormone activity (ortholog); identical protein binding (ortholog); lipid binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); amylin receptor 1 signaling pathway (ortholog); amylin receptor 2 signaling pathway (ortholog); ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); gastric ulcer (ortholog); type 1 diabetes mellitus (ortholog); FOUND IN extracellular region (ortholog); inclusion body (ortholog); neuronal cell body (ortholog) 6 52067 57528 + 22301074;30032202 116903062 MODEL JAAIVD010000024;XM_032905360 XP_032761251 protein-coding 625949717 Itga2 integrin subunit alpha 2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); collagen binding (ortholog); collagen binding involved in cell-matrix adhesion (ortholog); INVOLVED IN cell adhesion mediated by integrin (ortholog); cell-matrix adhesion (ortholog); cell-substrate adhesion (ortholog); PARTICIPATES IN integrin mediated signaling pathway; syndecan signaling pathway; ASSOCIATED WITH acute retinal necrosis syndrome (ortholog); arteriosclerosis (ortholog); Behcet's disease (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); basal part of cell (ortholog) 3 181794006 181881118 + 22301074;30032202 116897179 MODEL JAAIVD010000012;XM_032898865 XP_032754756 integrin alpha-2 protein-coding 625949751 Vars1 valyl-tRNA synthetase 1 ENCODES a protein that exhibits valine-tRNA ligase activity (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); microcephaly (ortholog); FOUND IN cytosol (ortholog) 18 7600580 7616189 + 22301074;30032202 116887092 MODEL JAAIVD010000013;XM_032888603 XP_032744494 valine--tRNA ligase protein-coding 625949785 LOC116907760 guanylate cyclase soluble subunit alpha-2-like 8 420892 443006 - 22301074;30032202 116907760 MODEL JAAIVD010000027;XM_032910898 XP_032766789 protein-coding 625949791 Sema3a semaphorin 3A ENCODES a protein that exhibits chemorepellent activity (ortholog); neuropilin binding (ortholog); semaphorin receptor binding (ortholog); INVOLVED IN axon extension involved in axon guidance (ortholog); axon guidance (ortholog); axonal fasciculation (ortholog); ASSOCIATED WITH amenorrhea (ortholog); Chemical and Drug Induced Liver Injury (ortholog); Delayed Puberty (ortholog); FOUND IN axon (ortholog); cerebellar climbing fiber to Purkinje cell synapse (ortholog); dendrite (ortholog) 6 144021609 144219712 + 30032202 116904153 MODEL JAAIVD010000024;XM_032907051 XP_032762942 semaphorin-3A protein-coding 625949813 Mlx MAX dimerization protein MLX ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); nucleocytoplasmic transport (ortholog); ASSOCIATED WITH oligoasthenoteratozoospermia (ortholog); Takayasu's arteritis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 9 60381839 60386632 + 22301074;30032202 116909323 MODEL JAAIVD010000002;XM_032912862;XM_032912863 XP_032768753;XP_032768754 max-like protein X protein-coding 625949828 LOC116905817 synaptophysin-like protein 1 7 8809820 8810525 - 116905817 MODEL JAAIVD010000026 pseudo 625949829 Slc43a3 solute carrier family 43 member 3 ENCODES a protein that exhibits adenine transmembrane transporter activity (ortholog); fatty acid transmembrane transporter activity (ortholog); guanine transmembrane transporter activity (ortholog); INVOLVED IN hypoxanthine transport (ortholog); ASSOCIATED WITH COVID-19 (ortholog); IgA glomerulonephritis (ortholog); FOUND IN basolateral plasma membrane (ortholog) 5 62302572 62322783 + 22301074 116900228 MODEL JAAIVD010000023;XM_032901979 XP_032757870 protein-coding 625949846 LOC116888185 microfibrillar-associated protein 1-like X 120188279 120200419 - 116888185 MODEL JAAIVD010000014 pseudo 625949847 LOC116912986 small nucleolar RNA SNORA17 11 25634270 25634397 - 116912986 MODEL JAAIVD010000006;XR_004389549 snorna 625949850 Nrm nurim ASSOCIATED WITH alcohol dependence (ortholog); FOUND IN nuclear envelope (ortholog); nuclear membrane (ortholog) 18 9072485 9076100 + 30032202 116887471 MODEL JAAIVD010000013;XM_032889079;XM_032889080;XM_032889081 XP_032744970;XP_032744971;XP_032744972 protein-coding 625949866 Cdhr4 cadherin related family member 4 8 99323176 99330778 + 22301074 116907847 MODEL JAAIVD010000027;XM_032911035 XP_032766926 cadherin-related family member 4 protein-coding 625949889 LOC116914457 heat shock protein HSP 90-beta-like 13 55549846 55551650 - 116914457 MODEL JAAIVD010000008 pseudo 625949890 LOC116902129 60S ribosomal protein L7a-like 1 107590401 107591171 - 116902129 MODEL JAAIVD010000025 pseudo 625949891 LOC116894182 olfactory receptor 473 2 105977841 105978773 + 22301074;30032202 116894182 MODEL JAAIVD010000001;XM_032895899 XP_032751790 protein-coding 625949894 LOC116914339 voltage-dependent anion-selective channel protein 1-like 13 49910355 49979795 - 116914339 MODEL JAAIVD010000008 pseudo 625949895 LOC116893747 GTP-binding nuclear protein Ran-like 2 25597110 25597626 + 116893747 MODEL JAAIVD010000001 pseudo 625949896 Kcmf1 potassium channel modulatory factor 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN HRI-mediated signaling (ortholog); negative regulation of HRI-mediated signaling (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 3 90999167 91000843 + 22301074;30032202 116896817 MODEL JAAIVD010000012;XM_032898292 XP_032754183 E3 ubiquitin-protein ligase KCMF1 protein-coding 625949901 Klc3 kinesin light chain 3 ENCODES a protein that exhibits kinesin binding (ortholog); microtubule binding (ortholog); INVOLVED IN axo-dendritic transport (ortholog); sperm mitochondrial sheath assembly (ortholog); spermatid development (ortholog); FOUND IN ciliary rootlet (ortholog); cytoplasm (ortholog); mitochondrion (ortholog) 2 171216872 171226439 + 22301074;30032202 116892533 MODEL JAAIVD010000001;XM_032894293 XP_032750184 protein-coding 625949918 LOC116910980 uncharacterized LOC116910980 10 93477811 93480030 + 116910980 MODEL JAAIVD010000005 pseudo 625949919 LOC116886957 inactive serine/threonine-protein kinase VRK3-like 18 33140537 33141009 + 116886957 MODEL JAAIVD010000013 pseudo 625949920 Sppl3 signal peptide peptidase like 3 ENCODES a protein that exhibits aspartic endopeptidase activity, intramembrane cleaving (ortholog); protein homodimerization activity (ortholog); INVOLVED IN membrane protein ectodomain proteolysis (ortholog); membrane protein proteolysis (ortholog); positive regulation of calcineurin-NFAT signaling cascade (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment membrane (ortholog); Golgi-associated vesicle membrane (ortholog) 16 38726931 38809897 - 22301074;30032202 116885954 MODEL JAAIVD010000004;XM_032887272 XP_032743163 signal peptide peptidase-like 3 protein-coding 625949935 Stra6 signaling receptor and transporter of retinol STRA6 ENCODES a protein that exhibits retinol transmembrane transporter activity (ortholog); INVOLVED IN adrenal gland development (ortholog); alveolar primary septum development (ortholog); artery morphogenesis (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; ASSOCIATED WITH Anophthalmia (ortholog); Cardiovascular Abnormalities (ortholog); colorectal adenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog); protein-containing complex (ortholog) 8 52011401 52030850 + 22301074;30032202 116906766 MODEL JAAIVD010000027;XM_032909610 XP_032765501 receptor for retinol uptake STRA6 protein-coding 625949958 Rplp1 ribosomal protein lateral stalk subunit P1 ENCODES a protein that exhibits ribonucleoprotein complex binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to Thyroid stimulating hormone (ortholog); cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic large ribosomal subunit (ortholog) 8 56218302 56219656 - 1742361;22301074;30032202 116907266 MODEL JAAIVD010000027;X15097;XM_032910222 CAA33200;XP_032766113 60S acidic ribosomal protein P1 protein-coding 625949965 Laptm4b lysosomal protein transmembrane 4 beta ENCODES a protein that exhibits ceramide binding (ortholog); kinase binding (ortholog); phosphatidylinositol bisphosphate binding (ortholog); INVOLVED IN endosome organization (ortholog); endosome transport via multivesicular body sorting pathway (ortholog); negative regulation of lysosomal protein catabolic process (ortholog); FOUND IN early endosome (ortholog); endosome (ortholog); late endosome membrane (ortholog) 1 207938347 207981363 + 30032202 116910453 MODEL JAAIVD010000025;XM_032914322 XP_032770213 lysosomal-associated transmembrane protein 4B protein-coding 625949976 LOC116895847 NEDD8-activating enzyme E1 catalytic subunit-like 3 85866387 85867667 + 116895847 MODEL JAAIVD010000012 pseudo 625949977 Rnf5 ring finger protein 5 ENCODES a protein that exhibits identical protein binding (ortholog); protein-containing complex binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN ERAD pathway (ortholog); negative regulation of autophagy (ortholog); protein catabolic process (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog) 18 7284004 7286542 - 30032202 116886828 MODEL JAAIVD010000013;XM_032888262 XP_032744153 E3 ubiquitin-protein ligase RNF5 protein-coding 625949987 Atp6v0a4 ATPase H+ transporting V0 subunit a4 ENCODES a protein that exhibits ATPase binding (ortholog); INVOLVED IN ossification (ortholog); proton transmembrane transport (ortholog); regulation of pH (ortholog); ASSOCIATED WITH autosomal recessive distal renal tubular acidosis 3 with or without sensorineural hearing loss (ortholog); congenital myopathy 13 (ortholog); Distal Renal Tubular Acidosis (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); brush border (ortholog) 6 101686567 101766047 + 22301074;30032202 116903954 MODEL JAAIVD010000024;XM_032906741;XM_032906742 XP_032762632;XP_032762633 V-type proton ATPase 116 kDa subunit a protein-coding 625950017 LOC116894407 keratin-associated protein 23-1 2 158535400 158535882 + 116894407 MODEL JAAIVD010000001;XM_032896113 XP_032752004 protein-coding 625950022 LOC116904729 small nucleolar RNA SNORA17 6 90545314 90545444 + 116904729 MODEL JAAIVD010000024;XR_004388419 snorna 625950025 LOC116883185 PRELI domain-containing protein 1, mitochondrial-like 14 34418905 34419717 + 116883185 MODEL JAAIVD010000009 pseudo 625950026 LOC116914322 40S ribosomal protein S8-like 13 44556141 44558038 - 116914322 MODEL JAAIVD010000008 pseudo 625950027 LOC116891808 olfactory receptor 51E2 2 102685938 102703921 - 22301074 116891808 MODEL JAAIVD010000001;XM_032893164;XM_032893165 XP_032749055;XP_032749056 protein-coding 625950037 LOC116893894 cardiotrophin-2 2 74173352 74181254 + 116893894 MODEL JAAIVD010000001;XM_032895613 XP_032751504 protein-coding 625950043 LOC116889927 olfactory receptor 6C2-like 1 160863987 160864919 - 22301074;30032202 116889927 MODEL JAAIVD010000025;XM_032890740 XP_032746631 protein-coding 625950046 LOC116893976 lysophospholipase-like protein 1 2 100627274 100627954 + 116893976 MODEL JAAIVD010000001 pseudo 625950047 Cltc clathrin heavy chain ENCODES a protein that exhibits ankyrin binding (ortholog); clathrin light chain binding (ortholog); disordered domain specific binding (ortholog); INVOLVED IN amyloid-beta clearance by transcytosis (ortholog); clathrin coat assembly (ortholog); clathrin-dependent endocytosis (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; FasL mediated signaling pathway; ASSOCIATED WITH autosomal dominant intellectual developmental disorder (ortholog); autosomal dominant intellectual developmental disorder 56 (ortholog); Developmental Disabilities (ortholog); FOUND IN clathrin coat (ortholog); clathrin complex (ortholog); clathrin-coated pit (ortholog) 9 84023834 84080666 + 22301074;30032202 116909608 MODEL JAAIVD010000002;XM_032913230;XM_032913231 XP_032769121;XP_032769122 clathrin heavy chain 1 protein-coding 625950088 Snapc5 small nuclear RNA activating complex polypeptide 5 ENCODES a protein that exhibits RNA polymerase II general transcription initiation factor activity (ortholog); RNA polymerase III general transcription initiation factor activity (ortholog); INVOLVED IN snRNA transcription by RNA polymerase II (ortholog); snRNA transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH long QT syndrome (ortholog); RASopathy (ortholog); FOUND IN nucleoplasm (ortholog) 8 58484264 58487156 + 22301074;30032202 116907674 MODEL JAAIVD010000027;XM_032910768 XP_032766659 snRNA-activating protein complex subunit 5 protein-coding 625950095 LOC116885055 small nucleolar RNA SNORA17 15 15606179 15606308 - 116885055 MODEL JAAIVD010000010;XR_004385939 snorna 625950098 Timm21 translocase of inner mitochondrial membrane 21 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); mitochondrial respiratory chain complex IV assembly (ortholog); protein import into mitochondrial matrix (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; FOUND IN mitochondrion (ortholog); TIM23 mitochondrial import inner membrane translocase complex (ortholog) 15 47418362 47423042 + 22301074;30032202 116884576 MODEL JAAIVD010000010;XM_032885718 XP_032741609 mitochondrial import inner membrane translocase subunit Tim21 protein-coding 625950108 LOC116904655 small nucleolar RNA SNORA71 6 100370312 100370435 + 116904655 MODEL JAAIVD010000024;XR_004388355 snorna 625950111 LOC116912429 high mobility group protein B1-like 11 21415817 21416511 - 116912429 MODEL JAAIVD010000006 pseudo 625950112 Derl3 derlin 3 ENCODES a protein that exhibits protein-containing complex binding (ortholog); signal recognition particle binding (ortholog); INVOLVED IN endoplasmic reticulum unfolded protein response (ortholog); ERAD pathway (ortholog); negative regulation of retrograde protein transport, ER to cytosol (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 18 11549596 11552152 - 30032202 116886821 MODEL JAAIVD010000013;XM_032888251;XM_032888252;XM_032888253;XM_032888254 XP_032744142;XP_032744143;XP_032744144;XP_032744145 derlin-3 protein-coding 625950130 Rab20 RAB20, member RAS oncogene family INVOLVED IN cellular response to type II interferon (ortholog); phagosome acidification (ortholog); phagosome-lysosome fusion (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN Golgi apparatus (ortholog); phagocytic vesicle (ortholog) 13 72380780 72405171 + 22301074;30032202 116914881 MODEL JAAIVD010000008;XM_032919324 XP_032775215 ras-related protein Rab-20 protein-coding 625950136 Igsf11 immunoglobulin superfamily member 11 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); INVOLVED IN homophilic cell-cell adhesion (ortholog); maintenance of protein location (ortholog); positive regulation of long-term synaptic potentiation (ortholog); FOUND IN cell-cell junction (ortholog); excitatory synapse (ortholog); glutamatergic synapse (ortholog) 4 23819457 23945900 + 30032202 116898851 MODEL JAAIVD010000003;XM_032900205 XP_032756096 protein-coding 625950147 Pgk2 phosphoglycerate kinase 2 ENCODES a protein that exhibits phosphoglycerate kinase activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); glycolytic process (ortholog); FOUND IN cilium (ortholog); sperm fibrous sheath (ortholog) 4 95426938 95428501 + 22301074;30032202 116898094 MODEL JAAIVD010000003;XM_032899480 XP_032755371 protein-coding 625950152 LOC116903784 60S ribosomal protein L15-like 6 88218830 88220194 + 116903784 MODEL JAAIVD010000024 pseudo 625950153 Rubcn rubicon autophagy regulator ENCODES a protein that exhibits phosphatidylinositol 3-kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of autophagosome maturation (ortholog); negative regulation of autophagy (ortholog); negative regulation of endocytosis (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 15 (ortholog); Developmental Disabilities (ortholog); spinocerebellar ataxia 15 (ortholog); FOUND IN early endosome (ortholog); Golgi apparatus (ortholog); late endosome (ortholog) 4 17627756 17673586 - 30032202 116898784 MODEL JAAIVD010000003;XM_032900122 XP_032756013 run domain Beclin-1-interacting and cysteine-rich domain-containing protein protein-coding 625950179 LOC116915138 U2 spliceosomal RNA 13 51372488 51372671 - 116915138 MODEL JAAIVD010000008;XR_004389814 snrna 625950182 LOC116888634 uncharacterized LOC116888634 X 13443722 13474784 - 116888634 MODEL JAAIVD010000014;XR_004386331 ncrna 625950187 Patl1 PAT1 homolog 1, processing body mRNA decay factor ENCODES a protein that exhibits poly(G) binding (ortholog); poly(U) RNA binding (ortholog); RNA binding (ortholog); INVOLVED IN deadenylation-dependent decapping of nuclear-transcribed mRNA (ortholog); P-body assembly (ortholog); PARTICIPATES IN microRNA pathway; FOUND IN CCR4-NOT complex (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); P-body (ortholog) 2 12002756 12033281 + 30032202 116890986 MODEL JAAIVD010000001;XM_032891659 XP_032747550 protein PAT1 homolog 1 protein-coding 625950210 LOC116901021 cystatin-S-like 5 128796054 128804789 + 116901021 MODEL JAAIVD010000023 pseudo 625950211 Piwil1 piwi like RNA-mediated gene silencing 1 ENCODES a protein that exhibits mRNA binding (ortholog); mRNA cap binding complex binding (ortholog); piRNA binding (ortholog); INVOLVED IN piRNA-mediated gene silencing by mRNA destabilization (ortholog); primary piRNA processing (ortholog); sperm DNA condensation (ortholog); ASSOCIATED WITH male infertility (ortholog); substance-related disorder (ortholog); FOUND IN chromatoid body (ortholog); cytoplasm (ortholog); dense body (ortholog) 16 25218332 25234717 - 22301074;30032202 116885561 MODEL JAAIVD010000004;XM_032886854 XP_032742745 piwi-like protein 1 protein-coding 625950233 LOC116895171 keratin, type II cytoskeletal 8-like 3 78496421 78497735 - 116895171 MODEL JAAIVD010000012 pseudo 625950234 Podxl podocalyxin like INVOLVED IN cell migration (ortholog); epithelial tube formation (ortholog); leukocyte migration (ortholog); ASSOCIATED WITH carotid artery disease (ortholog); early-onset Parkinson's disease (ortholog); genetic disease (ortholog); FOUND IN apical plasma membrane (ortholog); cell body (ortholog); cytoplasm (ortholog) 6 108030912 108077982 + 22301074;30032202 116903991 MODEL JAAIVD010000024;XM_032906797 XP_032762688 podocalyxin protein-coding 625950245 LOC116912690 histone H2B type 1-K-like 11 17845832 17850116 + 116912690 MODEL JAAIVD010000006 pseudo 625950246 Gtse1 G2 and S-phase expressed 1 ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasmic microtubule (ortholog); plasma membrane (ortholog) 1 255206589 255223516 + 30032202 116914716 MODEL JAAIVD010000025;XM_032919149 XP_032775040 G2 and S phase-expressed protein 1 protein-coding 625950262 LOC116907167 nucleolar RNA helicase 2-like 1 159463987 159466155 - 116907167 MODEL JAAIVD010000025 pseudo 625950263 F11r F11 receptor ENCODES a protein that exhibits integrin binding (ortholog); PDZ domain binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN actomyosin structure organization (ortholog); cell adhesion (ortholog); cell differentiation (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); atherosclerosis (ortholog); breast cancer (ortholog); FOUND IN bicellular tight junction (ortholog); cell junction (ortholog); cell-cell junction (ortholog) 10 50609112 50633112 + 30032202 116911373 MODEL JAAIVD010000005;XM_032915304 XP_032771195 junctional adhesion molecule A protein-coding 625950277 LOC116902560 small nucleolar RNA SNORA48 5 91456682 91456815 + 116902560 MODEL JAAIVD010000023 pseudo 625950278 Iars1 isoleucyl-tRNA synthetase 1 ENCODES a protein that exhibits GTPase binding (ortholog); isoleucine-tRNA ligase activity (ortholog); INVOLVED IN isoleucyl-tRNA aminoacylation (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); GROWTH RETARDATION, INTELLECTUAL DEVELOPMENTAL DISORDER, HYPOTONIA, AND HEPATOPATHY (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 14 68653047 68700058 + 22301074;30032202 116883352 MODEL JAAIVD010000009;XM_032884430 XP_032740321 isoleucine--tRNA ligase, cytoplasmic protein-coding 625950316 LOC116885116 small nucleolar RNA SNORA13 15 10538403 10538536 - 116885116 MODEL JAAIVD010000010;XR_004385979 snorna 625950319 LOC116894506 cone-rod homeobox protein-like 2 173221773 173232067 + 22301074;30032202 116894506 MODEL JAAIVD010000001;XM_032896211 XP_032752102 protein-coding 625950326 LOC116901966 speckle-type POZ protein-like 5 109985402 109996244 - 30032202 116901966 MODEL JAAIVD010000023;XM_032904204 XP_032760095 protein-coding 625950334 LOC116895321 transmembrane protein 258-like 3 31367367 31367606 + 22301074;30032202 116895321 MODEL JAAIVD010000012;XM_032896630 XP_032752521 protein-coding 625950337 LOC116914357 uncharacterized LOC116914357 13 65731009 65801173 + 116914357 MODEL JAAIVD010000008 pseudo 625950338 LOC116893455 leukocyte immunoglobulin-like receptor subfamily B member 3 2 178467059 178468429 - 116893455 MODEL JAAIVD010000001 pseudo 625950339 LOC116900728 small nuclear ribonucleoprotein E-like 5 136689719 136689986 - 116900728 MODEL JAAIVD010000023 pseudo 625950340 Cep83 centrosomal protein 83 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cilium assembly (ortholog); establishment of centrosome localization (ortholog); protein localization to centrosome (ortholog); ASSOCIATED WITH ciliopathy (ortholog); genetic disease (ortholog); megacolon (ortholog); FOUND IN centriole (ortholog); ciliary transition fiber (ortholog); Golgi apparatus (ortholog) 1 173857811 173968529 + 30032202 116908331 MODEL JAAIVD010000025;XM_032911613;XM_032911614;XM_032911615 XP_032767504;XP_032767505;XP_032767506 centrosomal protein of 83 kDa protein-coding 625950370 S100a8 S100 calcium binding protein A8 INVOLVED IN astrocyte development (ortholog); autocrine signaling (ortholog); autophagy (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); atopic dermatitis (ortholog); FOUND IN cytosol (ortholog); extracellular region (ortholog); intermediate filament cytoskeleton (ortholog) 3 62941873 62942388 - 22301074;30032202 116895418 MODEL JAAIVD010000012;XM_032896700 XP_032752591 protein S100-A8 protein-coding 625950376 LOC116893117 deleted in malignant brain tumors 1 protein-like 2 70858425 70889961 - 22301074;30032202 116893117 MODEL JAAIVD010000001;XM_032895055 XP_032750946 protein-coding 625950392 LOC116904490 PEST proteolytic signal-containing nuclear protein-like 6 151108330 151109421 + 116904490 MODEL JAAIVD010000024 pseudo 625950393 Myo1a myosin IA ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN microvillus assembly (ortholog); regulation of protein localization (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 48 (ortholog); congenital diarrhea (ortholog); congenital diarrhea 15 (ortholog); FOUND IN actin cytoskeleton (ortholog); apical plasma membrane (ortholog); basal plasma membrane (ortholog) 1 206151805 206168447 + 22301074;30032202 116910228 MODEL JAAIVD010000025;XM_032914122 XP_032770013 unconventional myosin-Ia protein-coding 625950425 Crybg2 crystallin beta-gamma domain containing 2 ASSOCIATED WITH COVID-19 (ortholog) 1 24148551 24167868 - 116894888 MODEL JAAIVD010000025;XM_032896501 XP_032752392 beta/gamma crystallin domain-containing protein 2 protein-coding 625950447 LOC116906453 small nucleolar RNA SNORA17 7 69897109 69897238 + 116906453 MODEL JAAIVD010000026;XR_004388709 snorna 625950450 Gba1 glucosylceramidase beta 1 ENCODES a protein that exhibits beta-glucosidase activity (ortholog); glucosylceramidase activity (ortholog); glucosyltransferase activity (ortholog); INVOLVED IN antigen processing and presentation (ortholog); autophagosome organization (ortholog); autophagy (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH alpha thalassemia-X-linked intellectual disability syndrome (ortholog); Gaucher's disease (ortholog); Gaucher's disease perinatal lethal (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog); Golgi apparatus (ortholog) 3 64468266 64474451 - 22301074;30032202 116896661 MODEL JAAIVD010000012;XM_032897997 XP_032753888 Gba lysosomal acid glucosylceramidase protein-coding 625950465 LOC116885206 mucin-17-like 16 16874311 16885307 + 116885206 MODEL JAAIVD010000004;XM_032886439 XP_032742330 protein-coding 625950479 Nmral1 NmrA like redox sensor 1 ENCODES a protein that exhibits identical protein binding (ortholog); FOUND IN nucleoplasm (ortholog) 9 17166064 17175161 + 116909876 MODEL JAAIVD010000002;XM_032913612;XM_032913613 XP_032769503;XP_032769504 nmrA-like family domain-containing protein 1 protein-coding 625950491 LOC116897109 uncharacterized LOC116897109 3 162801785 162810632 + 116897109 MODEL JAAIVD010000012;XR_004387396 ncrna 625950496 LOC116898112 60S ribosomal protein L23a-like 4 100567410 100567872 + 116898112 MODEL JAAIVD010000003 pseudo 625950497 LOC116894393 keratin-associated protein 20-2-like 2 157144700 157144903 + 116894393 MODEL JAAIVD010000001;XM_032896100 XP_032751991 protein-coding 625950500 Ccr4 C-C motif chemokine receptor 4 ENCODES a protein that exhibits C-C chemokine receptor activity (ortholog); INVOLVED IN chemotaxis (ortholog); homeostasis of number of cells (ortholog); inflammatory response (ortholog); ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); asthma (ortholog); brain ischemia (ortholog); FOUND IN external side of plasma membrane (ortholog); neuronal cell body (ortholog); plasma membrane (ortholog) 8 105096120 105097202 - 22301074;30032202 116908139 MODEL JAAIVD010000027;XM_032911432 XP_032767323 C-C chemokine receptor type 4 protein-coding 625950503 Klf13 KLF transcription factor 13 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); negative regulation of erythrocyte differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH chromosome 15q13.3 microdeletion syndrome (ortholog); congenital heart disease (ortholog); endometriosis (ortholog) 2 136432096 136475456 + 30032202 116892011 MODEL JAAIVD010000001;XM_032893472 XP_032749363 Krueppel-like factor 13;Kruppel like factor 13 protein-coding 625950509 LOC116885059 small nucleolar RNA SNORA17 15 11648181 11648305 + 116885059 MODEL JAAIVD010000010 pseudo 625950510 LOC116888164 integrator complex subunit 6-like X 116712704 116764174 - 30032202 116888164 MODEL JAAIVD010000014;XM_032889487 XP_032745378 protein-coding 625950533 Ifrd2 interferon related developmental regulator 2 ENCODES a protein that exhibits ribosome binding (ortholog); translation repressor activity (ortholog); INVOLVED IN adipose tissue development (ortholog); fat cell differentiation (ortholog); negative regulation of translation (ortholog) 8 98904765 98909972 + 116907536 MODEL JAAIVD010000027;XM_032910555 XP_032766446 interferon-related developmental regulator 2 protein-coding 625950549 LOC116911855 U4atac minor spliceosomal RNA 10 11045073 11045197 - 116911855 MODEL JAAIVD010000005;XR_004389377 snrna 625950552 LOC116890492 small nucleolar RNA SNORA48 1 213023827 213023969 + 116890492 MODEL JAAIVD010000025;XR_004386679 snorna 625950555 Mypn myopalladin ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); muscle alpha-actinin binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN sarcomere organization (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); atrial fibrillation (ortholog); Cap Myopathy (ortholog); FOUND IN cytosol (ortholog); I band (ortholog); nucleoplasm (ortholog) 18 23494515 23580811 + 116887392 MODEL JAAIVD010000013;XM_032888986;XM_032888987 XP_032744877;XP_032744878 protein-coding 625950582 Pttg1 PTTG1 regulator of sister chromatid separation, securin ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (ortholog); heat shock protein binding (ortholog); molecular function activator activity (ortholog); INVOLVED IN chromosome segregation (ortholog); homologous chromosome segregation (ortholog); mitotic sister chromatid cohesion (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Pituitary Neoplasms (ortholog); psoriasis (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); cytoplasm (ortholog) 9 26245259 26256623 - 22301074;30032202 116908983 MODEL JAAIVD010000002;XM_032912453;XM_032912454 XP_032768344;XP_032768345 securin protein-coding 625950595 Ppp2r5a protein phosphatase 2 regulatory subunit B'alpha ENCODES a protein that exhibits kinase binding (ortholog); kinase inhibitor activity (ortholog); protein phosphatase activator activity (ortholog); INVOLVED IN negative regulation of protein localization to plasma membrane (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Emphysema (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 10 69440708 69491395 - 22301074;30032202 116911780 MODEL JAAIVD010000005;XM_032915773 XP_032771664 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform protein-coding 625950612 Clip3 CAP-Gly domain containing linker protein 3 ENCODES a protein that exhibits ganglioside binding (ortholog); microtubule binding (ortholog); INVOLVED IN fat cell differentiation (ortholog); membrane biogenesis (ortholog); negative regulation of microtubule polymerization (ortholog); FOUND IN early endosome membrane (ortholog); membrane raft (ortholog); plasma membrane (ortholog) 2 165698597 165714746 - 30032202 116892327 MODEL JAAIVD010000001;XM_032893951;XM_032893952 XP_032749842;XP_032749843 CAP-Gly domain-containing linker protein 3 protein-coding 625950634 LOC116891371 MAPK-interacting and spindle-stabilizing protein 2 62973170 62983547 + 116891371 MODEL JAAIVD010000001;XM_032892369;XM_032892371 XP_032748260;XP_032748262 protein-coding 625950642 LOC116885808 olfactory receptor 13C7 1 2714222 2715169 + 22301074 116885808 MODEL JAAIVD010000025;XM_032887146 XP_032743037 protein-coding 625950645 Rnf25 ring finger protein 25 ENCODES a protein that exhibits NF-kappaB binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN protein K6-linked ubiquitination (ortholog); protein ubiquitination (ortholog); protein-RNA covalent cross-linking repair (ortholog); FOUND IN cytosol (ortholog); cytosolic ribosome (ortholog); nucleus (ortholog) 4 148033202 148040125 - 22301074;30032202 116899508 MODEL JAAIVD010000003;XM_032901361;XM_032901362;XM_032901363 XP_032757252;XP_032757253;XP_032757254 E3 ubiquitin-protein ligase RNF25 protein-coding 625950666 LOC116915203 uncharacterized LOC116915203 14 76585044 76589776 - 116915203 MODEL JAAIVD010000009;XR_004389855 ncrna 625950671 LOC116885873 olfactory receptor 13C7-like 1 2798341 2799291 + 22301074 116885873 MODEL JAAIVD010000025;XM_032887201 XP_032743092 protein-coding 625950674 Tmx1 thioredoxin related transmembrane protein 1 ENCODES a protein that exhibits disulfide oxidoreductase activity (ortholog); enzyme inhibitor activity (ortholog); protein disulfide isomerase activity (ortholog); INVOLVED IN negative regulation of platelet aggregation (ortholog); negative regulation of triglyceride biosynthetic process (ortholog); positive regulation of ERAD pathway (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); mitochondria-associated endoplasmic reticulum membrane contact site (ortholog) 7 84116729 84127759 + 116905134 MODEL JAAIVD010000026;XM_032907894 XP_032763785 thioredoxin-related transmembrane protein 1 protein-coding 625950686 LOC116884888 glyceraldehyde-3-phosphate dehydrogenase-like 1 212009786 212010509 - 116884888 MODEL JAAIVD010000025 pseudo 625950687 LOC116906431 small nucleolar RNA SNORA48 7 19251616 19251763 - 116906431 MODEL JAAIVD010000026;XR_004388692 snorna 625950690 Dgkb diacylglycerol kinase beta ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); lipid binding (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); glycerolipid metabolic process (ortholog); lipid phosphorylation (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); FOUND IN cytosol (ortholog); extrinsic component of postsynaptic density membrane (ortholog); glutamatergic synapse (ortholog) 7 51149152 51863944 + 22301074;30032202 116904984 MODEL JAAIVD010000026;XM_032907661 XP_032763552 protein-coding 625950720 Fhl5 four and a half LIM domains 5 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH migraine (ortholog) 1 152328361 152364099 - 30032202 116905965 MODEL JAAIVD010000025;XM_032909014 XP_032764905 four and a half LIM domains protein 5 protein-coding 625950730 LOC116905049 centrin-4-like 7 68058909 68059673 - 116905049 MODEL JAAIVD010000026 pseudo 625950731 LOC116894229 protein FAM98A-like 2 108626254 108627707 + 116894229 MODEL JAAIVD010000001 pseudo 625950732 Ccdc63 coiled-coil domain containing 63 INVOLVED IN spermatid development (ortholog); ASSOCIATED WITH melanoma (ortholog) 16 31697198 31726652 + 30032202 116885651 MODEL JAAIVD010000004;XM_032886956 XP_032742847 coiled-coil domain-containing protein 63 protein-coding 625950748 Sorcs1 sortilin related VPS10 domain containing receptor 1 ASSOCIATED WITH Alzheimer's disease 6 (ortholog); prostate cancer (ortholog); proteinuria (ortholog); FOUND IN membrane (ortholog) 2 49612314 50119457 - 22301074;30032202 116891278 MODEL JAAIVD010000001;XM_032892178;XM_032892179;XM_032892180;XM_032892181 XP_032748069;XP_032748070;XP_032748071;XP_032748072 VPS10 domain-containing receptor SorCS1 protein-coding 625950787 LOC116887058 vesicle transport protein SFT2A-like 18 11488803 11489456 + 22301074;30032202 116887058 MODEL JAAIVD010000013;XM_032888549 XP_032744440 protein-coding 625950792 LOC116887513 ubiquitin-40S ribosomal protein S27a-like 18 20482979 20483461 + 22301074;30032202 116887513 MODEL JAAIVD010000013;XM_032889137 XP_032745028 protein-coding 625950796 LOC116894669 trace amine-associated receptor 7a-like 2 210050752 210051818 - 22301074;30032202 116894669 MODEL JAAIVD010000001;XM_032896372 XP_032752263 protein-coding 625950800 LOC116913069 uncharacterized LOC116913069 12 77452111 77453401 - 116913069 MODEL JAAIVD010000007;XR_004389590 ncrna 625950804 LOC116889417 U6 spliceosomal RNA X 99226081 99226187 + 116889417 MODEL JAAIVD010000014;XR_004386382 snrna 625950807 Nox3 NADPH oxidase 3 ENCODES a protein that exhibits heme binding (ortholog); superoxide-generating NAD(P)H oxidase activity (ortholog); INVOLVED IN detection of gravity (ortholog); otolith development (ortholog); response to gravity (ortholog); PARTICIPATES IN thyroid hormone biosynthetic pathway; ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); NADPH oxidase complex (ortholog); plasma membrane (ortholog) 2 195069035 195133907 + 30032202 116894634 MODEL JAAIVD010000001;XM_032896350 XP_032752241 protein-coding 625950823 Arl6 ARF like GTPase 6 INVOLVED IN brain development (ortholog); cilium assembly (ortholog); fat cell differentiation (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl syndrome 3 (ortholog); FOUND IN ciliary tip (ortholog); cilium (ortholog); cytoplasm (ortholog) 4 43438779 43468066 - 22301074;30032202 116898923 MODEL JAAIVD010000003;XM_032900332;XM_032900333 XP_032756223;XP_032756224 ADP ribosylation factor like GTPase 6;ADP-ribosylation factor-like protein 6;ARL6 interacting reticulophagy regulator 1 protein-coding 625950838 LOC116894896 U6 spliceosomal RNA 2 228453119 228453221 - 116894896 MODEL JAAIVD010000001;XR_004387101 snrna 625950841 LOC116893788 cytochrome P450 26A1 ENCODES a protein that exhibits all-trans retinoic acid 18-hydroxylase activity (ortholog); oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (ortholog); retinoic acid 4-hydroxylase activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); cellular response to retinoic acid (ortholog); central nervous system development (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; retinol metabolic pathway; vitamin A deficiency pathway; ASSOCIATED WITH actinic keratosis (ortholog); adenocarcinoma (ortholog); Barrett's adenocarcinoma (ortholog) 2 36060638 36064306 - 22301074;30032202 116893788 MODEL JAAIVD010000001;XM_032895492 XP_032751383 protein-coding 625950851 LOC116891620 non-structural maintenance of chromosomes element 1 homolog 1 54895673 54916328 + 116891620 MODEL JAAIVD010000025 pseudo 625950852 LOC116897756 bis(5'-nucleosyl)-tetraphosphatase [asymmetrical]-like 4 5931995 5938525 + 116897756 MODEL JAAIVD010000003 pseudo 625950853 LOC116885320 zinc finger protein 664-like 1 13092806 13096192 + 116885320 MODEL JAAIVD010000025 pseudo 625950854 LOC116888751 protein ARMCX6-like X 87028905 87029559 + 30032202 116888751 MODEL JAAIVD010000014;XM_032890044 XP_032745935 protein-coding 625950858 Ifitm5 interferon induced transmembrane protein 5 INVOLVED IN bone mineralization (ortholog); bone morphogenesis (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH genetic disease (ortholog); osteogenesis imperfecta (ortholog); osteogenesis imperfecta type 5 (ortholog); FOUND IN plasma membrane (ortholog) 2 8531121 8532183 + 30032202 116890892 MODEL JAAIVD010000001;XM_032891507 XP_032747398 interferon-induced transmembrane protein 5 protein-coding 625950863 LOC116888892 actin, cytoplasmic 2-like X 122161849 122162975 - 116888892 MODEL JAAIVD010000014 pseudo 625950864 LOC116911616 FANCD2 opposite strand protein-like 10 28665802 28666455 + 116911616 MODEL JAAIVD010000005;XM_032915587 XP_032771478 protein-coding 625950867 Gprin1 G protein regulated inducer of neurite outgrowth 1 ENCODES a protein that exhibits phosphoprotein binding (ortholog); INVOLVED IN neuron projection development (ortholog); FOUND IN plasma membrane (ortholog) 14 73081017 73092807 - 30032202 116915228 MODEL JAAIVD010000009;XM_032919616 XP_032775507 G protein-regulated inducer of neurite outgrowth 1 protein-coding 625950873 Crygc crystallin gamma C INVOLVED IN camera-type eye development (ortholog); eye development (ortholog); lens development in camera-type eye (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 2 multiple types (ortholog); retinal degeneration (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 4 138962784 138964812 - 30032202 116899458 MODEL JAAIVD010000003;XM_032901241;XM_032901242;XM_032901243 XP_032757132;XP_032757133;XP_032757134 gamma-crystallin C protein-coding 625950889 LOC116889062 oligosaccharyltransferase complex subunit OSTC-like X 12340115 12340631 + 116889062 MODEL JAAIVD010000014 pseudo 625950890 LOC116890343 U6 spliceosomal RNA 1 136338606 136338714 + 116890343 MODEL JAAIVD010000025;XR_004386565 snrna 625950893 LOC116893500 vomeronasal type-2 receptor 116-like 2 185086389 185091915 - 22301074;30032202 116893500 MODEL JAAIVD010000001;XM_032895241 XP_032751132 protein-coding 625950900 LOC116901826 bifunctional peptidase and (3S)-lysyl hydroxylase Jmjd7 5 98181100 98196616 + 22301074;30032202 116901826 MODEL JAAIVD010000023;XM_032903987;XM_032903988;XM_032903989;XM_032903990 XP_032759878;XP_032759879;XP_032759880;XP_032759881 cytosolic phospholipase A2 beta protein-coding 625950939 LOC116890298 U2 spliceosomal RNA 1 228411784 228411938 - 116890298 MODEL JAAIVD010000025 pseudo 625950940 Ccr6 C-C motif chemokine receptor 6 ENCODES a protein that exhibits C-C chemokine binding (ortholog); C-C chemokine receptor activity (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cell chemotaxis (ortholog); chemotaxis (ortholog); ASSOCIATED WITH allergic disease (ortholog); asthma (ortholog); atherosclerosis (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); sperm flagellum (ortholog) 2 187102854 187125270 + 22301074;30032202 116894624 MODEL JAAIVD010000001;XM_032896339;XM_032896340 XP_032752230;XP_032752231 C-C chemokine receptor type 6 protein-coding 625950951 LOC116908461 U6 spliceosomal RNA 8 56825408 56825514 + 116908461 MODEL JAAIVD010000027;XR_004388979 snrna 625950954 Eid3 EP300 interacting inhibitor of differentiation 3 FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); Smc5-Smc6 complex (ortholog) 1 165576680 165578595 - 30032202 116907596 MODEL JAAIVD010000025;XM_032910647 XP_032766538 EP300-interacting inhibitor of differentiation 3 protein-coding 625950959 Bpifb2 BPI fold containing family B member 2 5 133209197 133227677 + 22301074 116901045 MODEL JAAIVD010000023;XM_032902627 XP_032758518 BPI fold-containing family B member 2 protein-coding 625950978 Rnf114 ring finger protein 114 ASSOCIATED WITH male infertility (ortholog); psoriasis (ortholog); FOUND IN cytosol (ortholog) 5 150480182 150491635 - 30032202 116902310 MODEL JAAIVD010000023;XM_032904754 XP_032760645 E3 ubiquitin-protein ligase RNF114 protein-coding 625950988 Ncr3lg1 natural killer cell cytotoxicity receptor 3 ligand 1 ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN NK T cell activation (ortholog); FOUND IN plasma membrane (ortholog) 2 153421108 153427895 - 30032202 116892111 MODEL JAAIVD010000001;XM_032893590 XP_032749481 natural cytotoxicity triggering receptor 3 ligand 1 protein-coding 625950996 Trnaa-ugc transfer RNA alanine (anticodon UGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). X 88352989 88353060 - 116889589 MODEL JAAIVD010000014 trna 625950997 LOC116908047 olfactory receptor 8D1-like 8 32690322 32691281 + 22301074;30032202 116908047 MODEL JAAIVD010000027;XM_032911322 XP_032767213 protein-coding 625951000 LOC116904498 HAUS augmin-like complex subunit 8 6 158502720 158511595 - 116904498 MODEL JAAIVD010000024 pseudo 625951001 LOC116898573 peptidyl-prolyl cis-trans isomerase D-like 4 160336415 160337734 - 116898573 MODEL JAAIVD010000003 pseudo 625951002 Ptx3 pentraxin 3 ENCODES a protein that exhibits (1->3)-beta-D-glucan binding (ortholog); complement component C1q complex binding (ortholog); identical protein binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); host-mediated suppression of symbiont invasion (ortholog); innate immune response (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); cystic fibrosis (ortholog); Diabetic Foot (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) 3 88939157 88944961 - 30032202 116896808 MODEL JAAIVD010000012;XM_032898282 XP_032754173 pentraxin-related protein PTX3 protein-coding 625951009 Efr3a EFR3 homolog A INVOLVED IN protein localization to plasma membrane (ortholog); synaptic vesicle priming (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) 1 239947342 240035838 + 30032202 116912178 MODEL JAAIVD010000025;XM_032916112 XP_032772003 protein EFR3 homolog A protein-coding 625951036 Prkg2 protein kinase cGMP-dependent 2 ENCODES a protein that exhibits cGMP-dependent protein kinase activity (ortholog); identical protein binding (ortholog); mitogen-activated protein kinase binding (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); intracellular signal transduction (ortholog); ASSOCIATED WITH acromesomelic dysplasia 4 (ortholog); Dwarfism (ortholog); genetic disease (ortholog); FOUND IN nuclear membrane (ortholog); plasma membrane (ortholog) 11 9186448 9290268 - 22301074 116912195 MODEL JAAIVD010000006;XM_032916130 XP_032772021 cGMP-dependent protein kinase 2 protein-coding 625951059 Slc14a1 solute carrier family 14 member 1 (Kidd blood group) ENCODES a protein that exhibits urea channel activity (ortholog); urea transmembrane transporter activity (ortholog); water transmembrane transporter activity (ortholog); INVOLVED IN urea transmembrane transport (ortholog); urea transport (ortholog); water transport (ortholog); ASSOCIATED WITH autoimmune hemolytic anemia (ortholog); hemolytic disease of the fetus (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) 15 54026589 54051027 + 22301074;30032202 116884736 MODEL JAAIVD010000010;XM_032885950;XM_032885951 XP_032741841;XP_032741842 urea transporter 1 protein-coding 625951076 LOC116904415 GTPase RhebL1-like 6 103607033 103607567 + 116904415 MODEL JAAIVD010000024 pseudo 625951077 Nsd2 nuclear receptor binding SET domain protein 2 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K36 methyltransferase activity (ortholog); histone H3K36 trimethyltransferase activity (ortholog); INVOLVED IN atrial septum primum morphogenesis (ortholog); atrial septum secundum morphogenesis (ortholog); bone development (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); anemia (ortholog); Breast Neoplasms (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 11 70948764 71022972 - 22301074;30032202 116912567 MODEL JAAIVD010000006;XM_032916668;XM_032916670;XM_032916671;XM_032916672;XM_032916673;XM_032916674;XM_032916675;XM_032916676;XM_032916677;XM_032916678;XM_032916679;XM_032916680;XM_032916681 XP_032772559;XP_032772561;XP_032772562;XP_032772563;XP_032772564;XP_032772565;XP_032772566;XP_032772567;XP_032772568;XP_032772569;XP_032772570;XP_032772571;XP_032772572 histone-lysine N-methyltransferase NSD2 protein-coding 625951129 LOC116894075 olfactory receptor 51G2-like 2 103024915 103025859 + 22301074 116894075 MODEL JAAIVD010000001;XM_032895798 XP_032751689 protein-coding 625951133 LOC116913307 dehydrogenase/reductase SDR family member 4 12 69519561 69531670 - 30032202 116913307 MODEL JAAIVD010000007;XM_032917443;XR_004389604 XP_032773334 protein-coding 625951149 LOC116892755 vomeronasal type-2 receptor 116-like 2 181978233 181998637 + 22301074;30032202 116892755 MODEL JAAIVD010000001;XM_032894633 XP_032750524 protein-coding 625951157 Ivd isovaleryl-CoA dehydrogenase ENCODES a protein that exhibits 3-methylbutanoyl-CoA dehydrogenase activity (ortholog); identical protein binding (ortholog); INVOLVED IN branched-chain amino acid catabolic process (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); L-leucine catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) 5 97038148 97059606 + 22301074;30032202 116901790 MODEL JAAIVD010000023;XM_032903938 XP_032759829 isovaleryl-CoA dehydrogenase, mitochondrial protein-coding 625951173 Fbh1 F-box DNA helicase 1 ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); DNA helicase activity (ortholog); DNA translocase activity (ortholog); INVOLVED IN DNA catabolic process (ortholog); DNA damage response (ortholog); DNA repair (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog); SCF ubiquitin ligase complex (ortholog) 14 17778928 17818062 - 22301074;30032202 116915232 MODEL JAAIVD010000009;XM_032919620;XM_032919621;XM_032919622;XM_032919623 XP_032775511;XP_032775512;XP_032775513;XP_032775514 protein-coding 625951208 Insc INSC spindle orientation adaptor protein ENCODES a protein that exhibits protein domain specific binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN regulation of protein stability (ortholog); FOUND IN cell cortex (ortholog); plasma membrane (ortholog); protein-containing complex (ortholog) 2 86692679 86797661 - 22301074;30032202 116891629 MODEL JAAIVD010000001;XM_032892842;XM_032892843 XP_032748733;XP_032748734 protein inscuteable homolog protein-coding 625951229 Rnaseh1 ribonuclease H1 ENCODES a protein that exhibits identical protein binding (ortholog); RNA-DNA hybrid ribonuclease activity (ortholog); INVOLVED IN mitochondrial DNA replication (ortholog); ASSOCIATED WITH autosomal recessive progressive external ophthalmoplegia with mitochondrial DNA deletions 2 (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog); nucleus (ortholog) 7 42100311 42109567 + 22301074;30032202 116904930 MODEL JAAIVD010000026;XM_032907560;XM_032907561 XP_032763451;XP_032763452 protein-coding 625951244 Lims1 LIM zinc finger domain containing 1 ENCODES a protein that exhibits protein kinase binding (ortholog); protein-containing complex binding (ortholog); zinc ion binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); actin filament network formation (ortholog); cell-cell adhesion (ortholog); PARTICIPATES IN integrin mediated signaling pathway; FOUND IN cell-cell junction (ortholog); focal adhesion (ortholog); perinuclear region of cytoplasm (ortholog) 18 24457511 24563852 + 22301074;30032202 116886898 MODEL JAAIVD010000013;XM_032888358;XM_032888359;XM_032888360;XM_032888361;XM_032888363;XM_032888364 XP_032744249;XP_032744250;XP_032744251;XP_032744252;XP_032744254;XP_032744255 LIM and senescent cell antigen-like-containing domain protein 1 protein-coding 625951276 LOC116895990 uncharacterized LOC116895990 3 166091851 166096860 - 22301074 116895990 MODEL JAAIVD010000012;XM_032897020 XP_032752911 uncharacterized protein LOC116895990 protein-coding 625951280 LOC116896614 uncharacterized LOC116896614 3 63361691 63366196 + 116896614 MODEL JAAIVD010000012;XR_004387349 ncrna 625951285 LOC116907605 putative olfactory receptor 10D4 8 82440401 82441345 + 22301074 116907605 MODEL JAAIVD010000027;XM_032910655 XP_032766546 protein-coding 625951288 LOC116892442 cytochrome P450 2F3-like 2 168784721 168788698 - 22301074;30032202 116892442 MODEL JAAIVD010000001;XM_032894137;XM_032894138 XP_032750028;XP_032750029 cytochrome P450 2F2-like protein-coding 625951302 LOC116884865 protocadherin beta-11-like 15 1127427 1131338 + 22301074 116884865 MODEL JAAIVD010000010;XM_032886104 XP_032741995 protein-coding 625951307 LOC116901736 forkhead box protein K2-like 5 90460003 90461977 + 22301074;30032202 116901736 MODEL JAAIVD010000023;XM_032903873 XP_032759764 protein-coding 625951312 Tnmd tenomodulin INVOLVED IN cellular response to BMP stimulus (ortholog); endothelial cell morphogenesis (ortholog); negative regulation of angiogenesis (ortholog) X 86180136 86195443 + 30032202 116889008 MODEL JAAIVD010000014;XM_032890217 XP_032746108 protein-coding 625951322 LOC116911135 dimethylaniline monooxygenase [N-oxide-forming] 3 10 42227634 42246304 - 22301074;30032202 116911135 MODEL JAAIVD010000005;XM_032914984 XP_032770875 protein-coding 625951335 LOC116887219 olfactory receptor 2H2-like 18 10115977 10117230 - 22301074 116887219 MODEL JAAIVD010000013;XM_032888779 XP_032744670 protein-coding 625951340 Mettl4 methyltransferase 4, N6-adenosine ENCODES a protein that exhibits mRNA N6-methyladenosine dioxygenase activity (ortholog); RNA methyltransferase activity (ortholog); site-specific DNA-methyltransferase (adenine-specific) activity (ortholog); INVOLVED IN negative regulation of gene expression, epigenetic (ortholog); regulation of mitochondrial DNA replication (ortholog); regulation of mitochondrial transcription (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); nucleus (ortholog) 4 180986359 181006523 + 22301074;30032202 116899722 MODEL JAAIVD010000003;XM_032901761;XM_032901762 XP_032757652;XP_032757653 N(6)-adenine-specific DNA methyltransferase METTL4;methyltransferase like 4 protein-coding 625951354 LOC116894170 olfactory receptor 10A5 2 105152249 105153214 + 22301074 116894170 MODEL JAAIVD010000001;XM_032895886 XP_032751777 protein-coding 625951358 Ntf4 neurotrophin 4 INVOLVED IN ameloblast differentiation (ortholog); ASSOCIATED WITH asthma (ortholog); autistic disorder (ortholog); genetic disease (ortholog) 2 154092641 154096058 - 22301074;30032202 116894340 MODEL JAAIVD010000001;XM_032896036 XP_032751927 neurotrophin-4 protein-coding 625951365 Arrdc4 arrestin domain containing 4 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN extracellular vesicle biogenesis (ortholog); positive regulation of interferon-beta production (ortholog); positive regulation of ubiquitin-protein transferase activity (ortholog); FOUND IN endosome (ortholog); extracellular vesicle (ortholog); plasma membrane (ortholog) 2 131575061 131588417 + 30032202 116891977 MODEL JAAIVD010000001;XM_032893419 XP_032749310 arrestin domain-containing protein 4 protein-coding 625951377 LOC116887106 keratin-associated protein 10-8-like 18 1098088 1098926 - 22301074;30032202 116887106 MODEL JAAIVD010000013;XM_032888640 XP_032744531 protein-coding 625951381 Otud4 OTU deubiquitinase 4 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); K63-linked deubiquitinase activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); DNA alkylation repair (ortholog); negative regulation of interleukin-1-mediated signaling pathway (ortholog); ASSOCIATED WITH amenorrhea (ortholog); FOUND IN cytosol (ortholog) 17 20419260 20467219 - 30032202 116886666 MODEL JAAIVD010000011;XM_032888157;XM_032888158;XM_032888159;XM_032888160 XP_032744048;XP_032744049;XP_032744050;XP_032744051 OTU domain-containing protein 4 protein-coding 625951418 LOC116891209 acyl-CoA desaturase 3 2 43741899 43761575 + 30032202 116891209 MODEL JAAIVD010000001;XM_032892041 XP_032747932 protein-coding 625951426 Mrnip MRN complex interacting protein ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN DNA damage response (ortholog); mitotic G2 DNA damage checkpoint signaling (ortholog); positive regulation of double-strand break repair via homologous recombination (ortholog); FOUND IN Mre11 complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 9 32841586 32865896 + 30032202 116908490 MODEL JAAIVD010000002;XM_032911648 XP_032767539 MRN complex-interacting protein protein-coding 625951437 LOC116886643 optic atrophy 3 protein homolog 17 19576779 19577292 - 116886643 MODEL JAAIVD010000011 pseudo 625951438 Crebbp CREB binding lysine acetyltransferase ENCODES a protein that exhibits acetyltransferase activity (ortholog); cAMP response element binding protein binding (ortholog); chromatin binding (ortholog); INVOLVED IN behavioral response to cocaine (ortholog); cAMP/PKA signal transduction (ortholog); canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN aldosterone signaling pathway; androgen signaling pathway; cortisol signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); histone acetyltransferase complex (ortholog) 9 17656950 17780021 + 22301074;30032202 116909647 MODEL JAAIVD010000002;XM_032913295;XM_032913297;XM_032913298 XP_032769186;XP_032769188;XP_032769189 CREB binding protein;CREB-binding protein protein-coding 625951478 C1r complement C1r ENCODES a protein that exhibits calcium ion binding (ortholog); identical protein binding (ortholog); molecular sequestering activity (ortholog); INVOLVED IN complement activation, classical pathway (ortholog); zymogen activation (ortholog); ASSOCIATED WITH Ehlers-Danlos syndrome (ortholog); Ehlers-Danlos syndrome periodontal type 1 (ortholog); Ehlers-Danlos syndrome periodontal type 2 (ortholog); FOUND IN complement component C1 complex (ortholog); extracellular region (ortholog); symbiont cell surface (ortholog) 6 23264839 23275780 - 22301074;30032202 116903290 MODEL JAAIVD010000024;XM_032905712 XP_032761603 complement C1r subcomponent protein-coding 625951493 Snx7 sorting nexin 7 INVOLVED IN positive regulation of autophagosome assembly (ortholog); protein transport (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN early endosome (ortholog) 3 41873636 41959207 + 22301074 116896319 MODEL JAAIVD010000012;XM_032897414 XP_032753305 sorting nexin-7 protein-coding 625951506 Neurog3 neurogenin 3 ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN enteroendocrine cell differentiation (ortholog); epithelial cell differentiation (ortholog); forebrain development (ortholog); ASSOCIATED WITH congenital malabsorptive diarrhea 4 (ortholog); Experimental Diabetes Mellitus (ortholog); genetic disease (ortholog); FOUND IN nucleus (ortholog) 18 27957685 27959552 + 22301074 116887291 MODEL JAAIVD010000013;XM_032888872 XP_032744763 neurogenin-3 protein-coding 625951511 LOC116912972 U1 spliceosomal RNA 11 91176130 91176259 - 116912972 MODEL JAAIVD010000006 pseudo 625951512 Csde1 cold shock domain containing E1 ENCODES a protein that exhibits lncRNA binding (ortholog); RISC complex binding (ortholog); RNA stem-loop binding (ortholog); INVOLVED IN CRD-mediated mRNA stabilization (ortholog); IRES-dependent viral translational initiation (ortholog); negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 11 (ortholog); genetic disease (ortholog); FOUND IN CRD-mediated mRNA stability complex (ortholog); cytosol (ortholog) 3 54979552 55006721 - 22301074 116896451 MODEL JAAIVD010000012;XM_032897608;XM_032897609 XP_032753499;XP_032753500 cold shock domain-containing protein E1 protein-coding 625951540 Cfap65 cilia and flagella associated protein 65 INVOLVED IN acrosome assembly (ortholog); cilium movement (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH prostate cancer (ortholog); schizophrenia (ortholog); spermatogenic failure 40 (ortholog); FOUND IN acrosomal vesicle (ortholog); axonemal central apparatus (ortholog); cytoplasm (ortholog) 4 148321685 148351037 - 116898542 MODEL JAAIVD010000003;XM_032899757 XP_032755648 cilia- and flagella-associated protein 65 protein-coding 625951574 LOC116896249 zinc finger protein 728-like 3 28436680 28446686 + 22301074;30032202 116896249 MODEL JAAIVD010000012;XM_032897319;XM_032897320 XP_032753210;XP_032753211 protein-coding 625951587 Cgnl1 cingulin like 1 INVOLVED IN actin filament organization (ortholog); angiogenesis (ortholog); establishment of protein localization (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN actin cytoskeleton (ortholog); apical junction complex (ortholog); bicellular tight junction (ortholog) 8 65918398 66068814 - 22301074 116907378 MODEL JAAIVD010000027;XM_032910331 XP_032766222 cingulin-like protein 1 protein-coding 625951610 LOC116900014 coiled-coil domain-containing protein 187-like 5 10787243 10809445 + 30032202 116900014 MODEL JAAIVD010000023;XM_032901814 XP_032757705 protein-coding 625951622 Eif5 eukaryotic translation initiation factor 5 ENCODES a protein that exhibits eukaryotic initiation factor eIF2 binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN activation of GTPase activity (ortholog); formation of translation preinitiation complex (ortholog); regulation of translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH schizophrenia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); synapse (ortholog) 7 129128125 129136546 + 22301074;30032202 116905490 MODEL JAAIVD010000026;XM_032908489;XM_032908490 XP_032764380;XP_032764381 protein-coding 625951641 Dipk2b divergent protein kinase domain 2B ASSOCIATED WITH autism spectrum disorder (ortholog); hepatocellular carcinoma (ortholog); X-Linked Intellectual Developmental Disorders (ortholog) X 1985732 2044584 + 116888939 MODEL JAAIVD010000014;XM_032890176 XP_032746067 protein-coding 625951649 LOC116884145 small nucleolar RNA SNORA24 14 68679696 68679814 + 116884145 MODEL JAAIVD010000009 pseudo 625951650 Snrnp200 small nuclear ribonucleoprotein U5 subunit 200 ENCODES a protein that exhibits helicase activity (ortholog); identical protein binding (ortholog); RNA helicase activity (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); spliceosome conformational change to release U4 (or U4atac) and U1 (or U11) (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH cone-rod dystrophy (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 5 105989638 106019620 + 22301074;30032202 116901929 MODEL JAAIVD010000023;XM_032904152 XP_032760043 U5 small nuclear ribonucleoprotein 200 kDa helicase protein-coding 625951699 LOC116902782 multifunctional protein ADE2-like 6 76594488 76595817 - 22301074 116902782 MODEL JAAIVD010000024;XM_032905124 XP_032761015 protein-coding 625951703 Usp49 ubiquitin specific peptidase 49 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); cysteine-type endopeptidase activity (ortholog); histone binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); protein deubiquitination (ortholog) 4 82195210 82263698 - 22301074;30032202 116899078 MODEL JAAIVD010000003;XM_032900574;XM_032900576;XM_032900577;XM_032900578;XM_032900579 XP_032756465;XP_032756467;XP_032756468;XP_032756469;XP_032756470 ubiquitin carboxyl-terminal hydrolase 49 protein-coding 625951726 LOC116889478 small nucleolar RNA SNORA1 X 102961329 102961465 + 116889478 MODEL JAAIVD010000014;XR_004386429 snorna 625951729 Rbm46 RNA binding motif protein 46 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN cell cycle switching, mitotic to meiotic cell cycle (ortholog); female meiotic nuclear division (ortholog); male meiotic nuclear division (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 3 70631679 70675085 + 30032202 116896747 MODEL JAAIVD010000012;XM_032898189;XM_032898190 XP_032754080;XP_032754081 probable RNA-binding protein 46 protein-coding 625951741 LOC116903007 igE-binding protein-like 6 146709919 146711155 + 116903007 MODEL JAAIVD010000024 pseudo 625951742 Nectin3 nectin cell adhesion molecule 3 ENCODES a protein that exhibits cell adhesion mediator activity (ortholog); cell adhesion molecule binding (ortholog); identical protein binding (ortholog); INVOLVED IN cell adhesion (ortholog); cell-cell adhesion (ortholog); cochlea morphogenesis (ortholog); ASSOCIATED WITH cataract (ortholog); Teratozoospermia (ortholog); FOUND IN adherens junction (ortholog); apical junction complex (ortholog); axon (ortholog) 4 31094384 31191558 - 22301074;30032202 116898884 MODEL JAAIVD010000003;XM_032900259;XM_032900260 XP_032756150;XP_032756151 nectin-3 protein-coding 625951760 Actr6 actin related protein 6 INVOLVED IN nucleolus organization (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; FOUND IN nucleolus (ortholog); Swr1 complex (ortholog) 1 168791467 168812081 - 30032202 116907923 MODEL JAAIVD010000025;XM_032911139 XP_032767030 actin-related protein 6 protein-coding 625951775 Gpkow G-patch domain and KOW motifs ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH X-linked Microhydranencephaly (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); spliceosomal complex (ortholog) X 14419994 14432083 - 30032202 116889006 MODEL JAAIVD010000014;XM_032890216 XP_032746107 G-patch domain and KOW motifs-containing protein protein-coding 625951791 LOC116892273 uncharacterized LOC116892273 2 163478978 163479887 + 116892273 MODEL JAAIVD010000001;XR_004386935 ncrna 625951795 Hcrt hypocretin neuropeptide precursor ENCODES a protein that exhibits neuropeptide activity (ortholog); neuropeptide hormone activity (ortholog); type 1 orexin receptor binding (ortholog); INVOLVED IN behavioral response to ethanol (ortholog); drinking behavior (ortholog); eating behavior (ortholog); PARTICIPATES IN orexin/hypocretin signaling pathway; orexin/hypocretin signaling pathway via orexin/hypocretin receptor 1; orexin/hypocretin signaling pathway via orexin/hypocretin receptor 2; ASSOCIATED WITH alcohol use disorder (ortholog); cannabis dependence (ortholog); cocaine abuse (ortholog); FOUND IN neuronal dense core vesicle lumen (ortholog); perinuclear region of cytoplasm (ortholog); secretory granule (ortholog) 9 60054119 60055385 - 22301074;30032202 116909524 MODEL JAAIVD010000002;XM_032913132 XP_032769023 orexin protein-coding 625951801 Gsg1 germ cell associated 1 ENCODES a protein that exhibits RNA polymerase binding (ortholog); FOUND IN endoplasmic reticulum (ortholog) 6 14175238 14192095 + 30032202 116903159 MODEL JAAIVD010000024;XM_032905527 XP_032761418 germ cell-specific gene 1 protein protein-coding 625951811 LOC116906457 small nucleolar RNA SNORA17 7 11215934 11216065 - 116906457 MODEL JAAIVD010000026;XR_004388713 snorna 625951814 LOC116890502 small nucleolar RNA SNORA48 1 193211975 193212114 - 116890502 MODEL JAAIVD010000025;XR_004386688 snorna 625951817 Mpzl1 myelin protein zero like 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive regulation of cell migration (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) 10 44704633 44742331 - 22301074;30032202 116911143 MODEL JAAIVD010000005;XM_032914995;XM_032914996 XP_032770886;XP_032770887 myelin protein zero-like protein 1 protein-coding 625951829 LOC116883832 zinc finger protein 431-like 14 76724005 76817806 + 22301074 116883832 MODEL JAAIVD010000009;XM_032885093;XM_032885094;XR_004385794;XR_004385795 XP_032740984;XP_032740985 protein-coding 625951842 Vcf1 VCP nuclear cofactor family member 1 9 75622845 75644373 + 116909179 MODEL JAAIVD010000002;XM_032912670;XM_032912671 XP_032768561;XP_032768562 Fam104a family with sequence similarity 104 member A;protein FAM104A protein-coding 625951852 LOC116910997 gem-associated protein 8-like 10 93594285 93594999 + 116910997 MODEL JAAIVD010000005 pseudo 625951853 LOC116887389 glutathione S-transferase theta-1 18 11641009 11656215 + 30032202 116887389 MODEL JAAIVD010000013;XM_032888983 XP_032744874 protein-coding 625951862 Unc13c unc-13 homolog C ENCODES a protein that exhibits calmodulin binding (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); negative regulation of synaptic plasticity (ortholog); synaptic vesicle exocytosis (ortholog); ASSOCIATED WITH clubfoot (ortholog); FOUND IN calyx of Held (ortholog); parallel fiber to Purkinje cell synapse (ortholog); presynapse (ortholog) 8 67814095 68257974 - 22301074;30032202 116907079 MODEL JAAIVD010000027;XM_032910033 XP_032765924 protein unc-13 homolog C protein-coding 625951898 LOC116909860 uncharacterized LOC116909860 9 62819333 62820461 - 116909860 MODEL JAAIVD010000002;XR_004389104 ncrna 625951902 Endov endonuclease V ENCODES a protein that exhibits DNA binding (ortholog); DNA endonuclease activity, producing 5'-phosphomonoesters (ortholog); magnesium ion binding (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nucleolus (ortholog) 9 64514065 64530048 - 22301074;30032202 116909713 MODEL JAAIVD010000002;XM_032913383;XM_032913384;XM_032913385 XP_032769274;XP_032769275;XP_032769276 protein-coding 625951923 LOC116888119 39S ribosomal protein L30, mitochondrial-like X 102900288 102900858 - 116888119 MODEL JAAIVD010000014 pseudo 625951924 LOC116896495 PRELI domain-containing protein 1, mitochondrial 3 60502781 60503639 + 30032202 116896495 MODEL JAAIVD010000012;XM_032897670;XM_032897671 XP_032753561;XP_032753562 protein-coding 625951934 Asb8 ankyrin repeat and SOCS box containing 8 1 270946122 270956650 - 22301074;30032202 116884669 MODEL JAAIVD010000025;XM_032885845;XM_032885853;XM_032885861 XP_032741736;XP_032741744;XP_032741752 ankyrin repeat and SOCS box protein 8 protein-coding 625951949 LOC116909704 60S ribosomal protein L37-like 9 94079449 94079742 - 116909704 MODEL JAAIVD010000002 pseudo 625951950 Hdhd3 haloacid dehalogenase like hydrolase domain containing 3 FOUND IN mitochondrion (ortholog); nucleolus (ortholog) 1 91030552 91034192 + 116901374 MODEL JAAIVD010000025;XM_032903244 XP_032759135 haloacid dehalogenase-like hydrolase domain-containing protein 3 protein-coding 625951956 Lrrc56 leucine rich repeat containing 56 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); Costello syndrome (ortholog) 2 8268210 8283763 - 22301074 116890881 MODEL JAAIVD010000001;XM_032891478;XM_032891479;XM_032891480;XM_032891481;XM_032891482;XM_032891484;XM_032891485 XP_032747369;XP_032747370;XP_032747371;XP_032747372;XP_032747373;XP_032747375;XP_032747376 leucine-rich repeat-containing protein 56 protein-coding 625951989 Itpr1 inositol 1,4,5-trisphosphate receptor type 1 ENCODES a protein that exhibits ATP binding (ortholog); calcium channel inhibitor activity (ortholog); identical protein binding (ortholog); INVOLVED IN calcium import into the mitochondrion (ortholog); calcium ion transport (ortholog); cell morphogenesis (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); anterior segment dysgenesis (ortholog); asthma (ortholog); FOUND IN calcineurin complex (ortholog); cytoplasm (ortholog); dendrite (ortholog) 6 38248197 38571331 - 22301074 116903440 MODEL JAAIVD010000024;XM_032905993 XP_032761884 protein-coding 625952055 Smg8 SMG8 nonsense mediated mRNA decay factor INVOLVED IN nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); regulation of protein kinase activity (ortholog); ASSOCIATED WITH ALZAHRANI-KUWAHARA SYNDROME (ortholog); genetic disease (ortholog) 9 83710790 83719378 + 22301074;30032202 116909707 MODEL JAAIVD010000002;XM_032913377 XP_032769268 protein SMG8 protein-coding 625952063 LOC116885099 U7 small nuclear RNA 15 29299319 29299381 + 116885099 MODEL JAAIVD010000010;XR_004385966 snrna 625952066 Ddx52 DExD-box helicase 52 FOUND IN nucleolus (ortholog) 9 86715748 86738534 - 22301074;30032202 116910105 MODEL JAAIVD010000002;XM_032913933 XP_032769824 probable ATP-dependent RNA helicase DDX52 protein-coding 625952085 Scnn1g sodium channel epithelial 1 subunit gamma ENCODES a protein that exhibits ligand-gated sodium channel activity (ortholog); monoatomic ion channel activity (ortholog); sodium channel activity (ortholog); INVOLVED IN cellular response to acidic pH (ortholog); cellular response to aldosterone (ortholog); intracellular sodium ion homeostasis (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); autism spectrum disorder (ortholog); autosomal recessive pseudohypoaldosteronism type 1 (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); external side of plasma membrane (ortholog) 2 80034079 80067560 - 22301074;30032202 116893912 MODEL JAAIVD010000001;XM_032895635 XP_032751526 amiloride-sensitive sodium channel subunit gamma protein-coding 625952102 Lmntd2 lamin tail domain containing 2 INVOLVED IN positive regulation of mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Beckwith-Wiedemann syndrome (ortholog) 2 8262400 8268275 + 30032202 116890880 MODEL JAAIVD010000001;XM_032891475;XM_032891476;XM_032891477 XP_032747366;XP_032747367;XP_032747368 lamin tail domain-containing protein 2 protein-coding 625952127 LOC116887966 uncharacterized LOC116887966 X 66374793 66376742 - 116887966 MODEL JAAIVD010000014 pseudo 625952128 LOC116912917 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like 11 32014046 32014413 + 116912917 MODEL JAAIVD010000006 pseudo 625952129 Insrr insulin receptor related receptor ENCODES a protein that exhibits transmembrane receptor protein tyrosine kinase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to alkaline pH (ortholog); male sex determination (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); FOUND IN signaling receptor complex (ortholog) 3 65745019 65764304 - 22301074;30032202 116896714 MODEL JAAIVD010000012;XM_032898133 XP_032754024 insulin receptor-related protein protein-coding 625952155 Trnas-aga transfer RNA serine (anticodon AGA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41774929 41775009 + 116884214 MODEL JAAIVD010000009 trna 625952156 Vmo1 vitelline membrane outer layer 1 homolog ASSOCIATED WITH renal cell carcinoma (ortholog) 9 50127896 50129215 - 30032202 116909623 MODEL JAAIVD010000002;XM_032913252 XP_032769143 vitelline membrane outer layer protein 1 homolog protein-coding 625952163 LOC116885449 myosin light polypeptide 6-like 16 26737782 26738398 - 22301074;30032202 116885449 MODEL JAAIVD010000004;XM_032886733 XP_032742624 protein-coding 625952168 Upf3b UPF3B regulator of nonsense mediated mRNA decay ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); positive regulation of mRNA cis splicing, via spliceosome (ortholog); positive regulation of translation (ortholog); ASSOCIATED WITH cataract (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN cytosol (ortholog); exon-exon junction complex (ortholog); neuronal cell body (ortholog) X 103275236 103293305 - 30032202 116888449 MODEL JAAIVD010000014;XM_032889726;XM_032889727;XM_032889728 XP_032745617;XP_032745618;XP_032745619 regulator of nonsense transcripts 3B protein-coding 625952191 LOC116890336 U6 spliceosomal RNA 1 25489207 25489313 + 116890336 MODEL JAAIVD010000025;XR_004386558 snrna 625952194 LOC116898554 60S ribosomal protein L18-like 1 40580371 40580923 + 116898554 MODEL JAAIVD010000025 pseudo 625952195 Znf358 zinc finger protein 358 16 1422512 1426612 + 30032202 116885681 MODEL JAAIVD010000004;XM_032886987 XP_032742878 protein-coding 625952201 LOC116913575 toll-like receptor 11 12 72882874 72887936 - 22301074;30032202 116913575 MODEL JAAIVD010000007;XM_032917794 XP_032773685 protein-coding 625952207 LOC116904766 U1 spliceosomal RNA 6 154797166 154797317 - 116904766 MODEL JAAIVD010000024 pseudo 625952208 Nagpa N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase INVOLVED IN secretion of lysosomal enzymes (ortholog); ASSOCIATED WITH Familial Persistent Stuttering 2 (ortholog) 9 16707706 16715951 + 116909234 MODEL JAAIVD010000002;XM_032912735 XP_032768626 protein-coding 625952221 LOC116902869 TRPM8 channel-associated factor 3 6 98216903 98231207 - 30032202 116902869 MODEL JAAIVD010000024;XM_032905199 XP_032761090 protein-coding 625952233 Znf131 zinc finger protein 131 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN intermediate filament cytoskeleton (ortholog); nucleoplasm (ortholog) 3 177121352 177149763 + 22301074;30032202 116897163 MODEL JAAIVD010000012;XM_032898835;XM_032898836;XM_032898837;XM_032898838;XM_032898839;XM_032898840 XP_032754726;XP_032754727;XP_032754728;XP_032754729;XP_032754730;XP_032754731 protein-coding 625952261 LOC116896431 40S ribosomal protein S2-like 3 53608600 53609475 + 116896431 MODEL JAAIVD010000012;XR_004387336 pseudo 625952264 Ptn pleiotrophin ENCODES a protein that exhibits carbohydrate binding (ortholog); chondroitin sulfate binding (ortholog); chondroitin sulfate proteoglycan binding (ortholog); INVOLVED IN bone mineralization (ortholog); cellular response to D-galactosamine (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH adrenal carcinoma (ortholog); Animal Mammary Neoplasms (ortholog); Body Weight (ortholog); FOUND IN basement membrane (ortholog); cell surface (ortholog); endoplasmic reticulum (ortholog) 6 103063457 103146178 + 22301074;30032202 116903962 MODEL JAAIVD010000024;XM_032906756 XP_032762647 protein-coding 625952273 Csnk2a1 casein kinase 2 alpha 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); identical protein binding (ortholog); kinase activity (ortholog); INVOLVED IN cerebral cortex development (ortholog); DNA damage response (ortholog); double-strand break repair (ortholog); PARTICIPATES IN E-cadherin signaling pathway; mitochondrial autophagy pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); autism spectrum disorder (ortholog); breast cancer (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 5 131563975 131610422 + 22301074;30032202 116902115 MODEL JAAIVD010000023;XM_032904428;XM_032904429;XM_032904430;XM_032904431 XP_032760319;XP_032760320;XP_032760321;XP_032760322 casein kinase II subunit alpha protein-coding 625952298 LOC116887684 SIN3-HDAC complex-associated factor-like 18 45033769 45034127 - 116887684 MODEL JAAIVD010000013 pseudo 625952299 Dis3 DIS3 exosome endoribonuclease and 3''-5'' exoribonuclease ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); endonuclease activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN CUT catabolic process (ortholog); RNA catabolic process (ortholog); RNA processing (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH multiple myeloma (ortholog); Perlman syndrome (ortholog); FOUND IN cytosol (ortholog); nuclear exosome (RNase complex) (ortholog); nucleolus (ortholog) 12 25413711 25440055 + 22301074;30032202 116913582 MODEL JAAIVD010000007;XM_032917808;XM_032917810 XP_032773699;XP_032773701 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease;exosome complex exonuclease RRP44 protein-coding 625952328 Cd80 CD80 molecule ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); negative regulation of T cell mediated immunity (ortholog); positive regulation of alpha-beta T cell proliferation (ortholog); ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); anti-basement membrane glomerulonephritis (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) 4 23411721 23430767 + 22301074;30032202 116898844 MODEL JAAIVD010000003;XM_032900199 XP_032756090 T-lymphocyte activation antigen CD80 protein-coding 625952335 Gabrd gamma-aminobutyric acid type A receptor subunit delta ENCODES a protein that exhibits GABA-A receptor activity (ortholog); transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); chloride transmembrane transport (ortholog); gamma-aminobutyric acid signaling pathway (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); autism spectrum disorder (ortholog); cocaine dependence (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); GABA-ergic synapse (ortholog) 1 5310049 5322116 + 22301074;30032202 116891967 MODEL JAAIVD010000025;XM_032893413;XM_032893420 XP_032749304;XP_032749311 gamma-aminobutyric acid receptor subunit delta protein-coding 625952351 LOC116906218 Ig heavy chain V region 441-like 7 121502328 121504620 - 116906218 MODEL JAAIVD010000026 pseudo 625952352 Pcp2 Purkinje cell protein 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN G protein-coupled opsin signaling pathway (ortholog) 16 1548035 1550097 - 22301074;30032202 116885370 MODEL JAAIVD010000004;XM_032886644;XM_032886645 XP_032742535;XP_032742536 Purkinje cell protein 2 homolog protein-coding 625952363 LOC116889577 U6 spliceosomal RNA X 14253391 14253493 - 116889577 MODEL JAAIVD010000014;XR_004386493 snrna 625952366 LOC116884524 HIG1 domain family member 1A, mitochondrial-like 15 63335537 63335982 - 30032202 116884524 MODEL JAAIVD010000010;XM_032885659 XP_032741550 protein-coding 625952371 LOC116909938 serine protease 30 9 1270024 1274068 - 22301074 116909938 MODEL JAAIVD010000002;XM_032913712 XP_032769603 protein-coding 625952382 Ly9 lymphocyte antigen 9 INVOLVED IN positive regulation of interleukin-17 production (ortholog); T-helper 17 cell lineage commitment (ortholog); ASSOCIATED WITH multisystem inflammatory syndrome in children (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) 10 50759699 50778878 - 30032202 116911565 MODEL JAAIVD010000005;XM_032915555;XM_032915556 XP_032771446;XP_032771447 T-lymphocyte surface antigen Ly-9 protein-coding 625952396 Itpkb inositol-trisphosphate 3-kinase B ENCODES a protein that exhibits inositol-1,4,5-trisphosphate 3-kinase activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); cellular response to calcium ion (ortholog); common myeloid progenitor cell proliferation (ortholog); ASSOCIATED WITH myeloproliferative neoplasm (ortholog); FOUND IN cytoplasm (ortholog); cytoskeleton (ortholog); cytosol (ortholog) 10 58661976 58757915 + 22301074;30032202 116911040 MODEL JAAIVD010000005;XM_032914787 XP_032770678 protein-coding 625952408 Ccno cyclin O INVOLVED IN cilium assembly (ortholog); mitotic cell cycle (ortholog); multi-ciliated epithelial cell differentiation (ortholog); ASSOCIATED WITH genetic disease (ortholog); obstructive lung disease (ortholog); primary ciliary dyskinesia (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog) 3 183793064 183795204 - 30032202 116895653 MODEL JAAIVD010000012;XM_032896860 XP_032752751 cyclin-O protein-coding 625952413 LOC116885207 uncharacterized LOC116885207 16 16826173 16827107 + 116885207 MODEL JAAIVD010000004;XR_004385994 ncrna 625952417 LOC116894930 U1 spliceosomal RNA 2 96781093 96781257 + 116894930 MODEL JAAIVD010000001;XR_004387129 snrna 625952420 LOC116904783 small nucleolar RNA SNORD88 6 97943816 97943904 - 116904783 MODEL JAAIVD010000024;XR_004388447 snorna 625952423 Lct lactase ENCODES a protein that exhibits beta-glucosidase activity (ortholog); galactosylceramidase activity (ortholog); glucosylceramidase activity (ortholog); INVOLVED IN cellobiose catabolic process (ortholog); glycosylceramide catabolic process (ortholog); lactose catabolic process (ortholog); PARTICIPATES IN galactose metabolic pathway; galactosemia pathway; lactose degradation pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); colitis (ortholog); congenital lactase deficiency (ortholog); FOUND IN brush border (ortholog); external side of apical plasma membrane (ortholog) 10 7387338 7430396 + 1909681;22301074;30032202 116911261 MODEL JAAIVD010000005;X56747;X56748;XM_032915165 CAA40069;CAA40070;XP_032771056 lactase-phlorizin hydrolase protein-coding 625952444 LOC116907212 heterogeneous nuclear ribonucleoprotein A1-like 8 7084177 7085238 - 116907212 MODEL JAAIVD010000027 pseudo 625952445 LOC116895257 olfactory receptor 2AG1-like 3 375462 376409 + 22301074 116895257 MODEL JAAIVD010000012;XM_032896576 XP_032752467 protein-coding 625952448 Pcgf2 polycomb group ring finger 2 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); cellular response to hydrogen peroxide (ortholog); chromatin organization (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN chromatin (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 9 56683348 56695028 + 30032202 116908806 MODEL JAAIVD010000002;XM_032912208;XM_032912209;XM_032912210;XM_032912211 XP_032768099;XP_032768100;XP_032768101;XP_032768102 polycomb group RING finger protein 2 protein-coding 625952472 Prrt2 proline rich transmembrane protein 2 ENCODES a protein that exhibits SH3 domain binding (ortholog); syntaxin-1 binding (ortholog); INVOLVED IN negative regulation of short-term synaptic potentiation (ortholog); negative regulation of SNARE complex assembly (ortholog); neuromuscular process controlling posture (ortholog); ASSOCIATED WITH benign familial infantile seizures 2 (ortholog); Episodic Kinesigenic Dyskinesia (ortholog); episodic kinesigenic dyskinesia 1 (ortholog); FOUND IN axon terminus (ortholog); glutamatergic synapse (ortholog); membrane (ortholog) 2 74872189 74876105 + 22301074;30032202 116891491 MODEL JAAIVD010000001;XM_032892595;XM_032892597 XP_032748486;XP_032748488 proline-rich transmembrane protein 2 protein-coding 625952485 LOC116894209 olfactory receptor 497-like 2 106462995 106463939 + 22301074;30032202 116894209 MODEL JAAIVD010000001;XM_032895921 XP_032751812 protein-coding 625952488 Myo9a myosin IXA INVOLVED IN cell junction assembly (ortholog); establishment of epithelial cell apical/basal polarity (ortholog); postsynaptic specialization organization (ortholog); ASSOCIATED WITH bronchiectasis (ortholog); congenital myasthenic syndrome (ortholog); Congenital Myasthenic Syndrome 24 (ortholog); FOUND IN axonal growth cone (ortholog); glutamatergic synapse (ortholog); postsynapse (ortholog) 8 53588709 53780292 + 22301074;30032202 116906589 MODEL JAAIVD010000027;XM_032909329;XM_032909330;XM_032909331;XM_032909332 XP_032765220;XP_032765221;XP_032765222;XP_032765223 unconventional myosin-IXa protein-coding 625952539 LOC116893539 protein LEG1 homolog 2 203524672 203539272 - 30032202 116893539 MODEL JAAIVD010000001;XM_032895259 XP_032751150 protein-coding 625952547 LOC116907894 60S ribosomal protein L32-like 8 77903578 77903996 + 116907894 MODEL JAAIVD010000027 pseudo 625952548 Ret ret proto-oncogene ENCODES a protein that exhibits calcium ion binding (ortholog); transmembrane receptor protein tyrosine kinase activity (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cellular response to retinoic acid (ortholog); embryonic epithelial tube formation (ortholog); ASSOCIATED WITH appendicitis (ortholog); Brain Injuries (ortholog); brain ischemia (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); early endosome (ortholog) 6 28542797 28585158 + 22301074;30032202 116903351 MODEL JAAIVD010000024;XM_032905821 XP_032761712 proto-oncogene tyrosine-protein kinase receptor Ret protein-coding 625952572 LOC116905838 nascent polypeptide-associated complex subunit alpha, muscle-specific form-like 1 155520851 155528158 + 116905838 MODEL JAAIVD010000025;XM_032908813 XP_032764704 protein-coding 625952577 LOC116908861 atherin-like 9 63770685 63772630 + 116908861 MODEL JAAIVD010000002;XM_032912301;XM_032912302;XM_032912303 XP_032768192;XP_032768193;XP_032768194 uncharacterized protein LOC116908861 protein-coding 625952590 LOC116903004 vomeronasal type-1 receptor 93 6 146597120 146604392 + 22301074;30032202 116903004 MODEL JAAIVD010000024;XM_032905316 XP_032761207 protein-coding 625952597 Kras KRAS proto-oncogene, GTPase ENCODES a protein that exhibits GDP binding (ortholog); GMP binding (ortholog); GTPase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); canonical NF-kappaB signal transduction (ortholog); cardiac muscle cell proliferation (ortholog); PARTICIPATES IN altered extracellular signal-regulated Raf/Mek/Erk signaling pathway; colorectal cancer pathway; endometrial cancer pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) 6 2977677 3010435 - 22301074;30032202 116903078 MODEL JAAIVD010000024;XM_032905396;XM_032905397;XM_032905399 XP_032761287;XP_032761288;XP_032761290 GTPase KRas protein-coding 625952615 Gsto1 glutathione S-transferase omega 1 ENCODES a protein that exhibits glutathione dehydrogenase (ascorbate) activity (ortholog); glutathione transferase activity (ortholog); oxidoreductase activity (ortholog); INVOLVED IN cellular response to arsenic-containing substance (ortholog); L-ascorbic acid biosynthetic process (ortholog); L-ascorbic acid metabolic process (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); autism spectrum disorder (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN axon (ortholog); basement membrane (ortholog); cell body (ortholog) 2 47362784 47372699 + 22301074;30032202;8042991;9786866 116891274 MODEL AB008807;JAAIVD010000001;XM_032892174 BAA34217;XP_032748065 glutathione S-transferase omega-1;glutathione-dependent dehydroascorbate reductase protein-coding 625952625 Arl5c ARF like GTPase 5C 9 56389636 56396872 + 22301074;30032202 116909512 MODEL JAAIVD010000002;XM_032913116 XP_032769007 ADP ribosylation factor like GTPase 5C;putative ADP-ribosylation factor-like protein 5C protein-coding 625952635 LOC116890570 small nucleolar RNA SNORA17 1 79744061 79744211 + 116890570 MODEL JAAIVD010000025 pseudo 625952636 Eif2d eukaryotic translation initiation factor 2D ENCODES a protein that exhibits translation initiation factor activity (ortholog); INVOLVED IN formation of translation preinitiation complex (ortholog); IRES-dependent viral translational initiation (ortholog); ribosome disassembly (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 10 4631780 4656157 - 22301074;30032202 116911010 MODEL JAAIVD010000005;XM_032914739;XR_004389296;XR_004389297 XP_032770630 protein-coding 625952660 LOC116903758 S-adenosylmethionine synthase-like 6 15618907 15703404 - 116903758 MODEL JAAIVD010000024 pseudo 625952661 Cd1d CD1d molecule ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); endogenous lipid antigen binding (ortholog); exogenous lipid antigen binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); antigen processing and presentation, endogenous lipid antigen via MHC class Ib (ortholog); antigen processing and presentation, exogenous lipid antigen via MHC class Ib (ortholog); ASSOCIATED WITH Acute Hepatitis (ortholog); Arenaviridae infectious disease (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); early endosome (ortholog) 3 66569723 66573250 + 30032202 116895432 MODEL JAAIVD010000012;XM_032896714 XP_032752605 antigen-presenting glycoprotein CD1d protein-coding 625952671 LOC116900163 heterogeneous nuclear ribonucleoprotein A1-like 5 28104217 28105240 + 116900163 MODEL JAAIVD010000023 pseudo 625952672 LOC116910507 C-C motif chemokine 12-like 9 88368953 88370493 - 22301074;30032202 116910507 MODEL JAAIVD010000002;XM_032914405;XM_032914406 XP_032770296;XP_032770297 protein-coding 625952683 Tcf7l2 transcription factor 7 like 2 ENCODES a protein that exhibits armadillo repeat domain binding (ortholog); beta-catenin binding (ortholog); chromatin binding (ortholog); INVOLVED IN blood vessel development (ortholog); bone mineralization (ortholog); canonical Wnt signaling pathway (ortholog); PARTICIPATES IN altered Wnt signaling, canonical pathway; pancreatic cancer pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Animal Disease Models (ortholog); autistic disorder (ortholog); FOUND IN beta-catenin-TCF7L2 complex (ortholog); catenin-TCF7L2 complex (ortholog); chromatin (ortholog) 2 60234041 60427146 - 30032202 116891338 MODEL JAAIVD010000001;XM_032892270;XM_032892271;XM_032892273;XM_032892274;XM_032892275;XM_032892276;XM_032892277;XM_032892278;XM_032892279;XM_032892280;XM_032892281;XM_032892282;XM_032892283;XM_032892284;XM_032892285;XM_032892286;XM_032892287;XM_032892289;XM_032892290;XM_032892291;XM_032892292;XM_032892293;XM_032892294;XM_032892295;XM_032892296;XM_032892297;XM_032892298;XM_032892300;XM_032892301;XM_032892302;XM_032892303;XM_032892304;XM_032892305;XM_032892306;XM_032892307;XM_032892308;XM_032892309;XM_032892311;XM_032892312;XM_032892313;XM_032892314;XM_032892315;XM_032892316;XM_032892317;XM_032892318;XM_032892319;XM_032892320;XM_032892322;XM_032892323;XM_032892324 XP_032748161;XP_032748162;XP_032748164;XP_032748165;XP_032748166;XP_032748167;XP_032748168;XP_032748169;XP_032748170;XP_032748171;XP_032748172;XP_032748173;XP_032748174;XP_032748175;XP_032748176;XP_032748177;XP_032748178;XP_032748180;XP_032748181;XP_032748182;XP_032748183;XP_032748184;XP_032748185;XP_032748186;XP_032748187;XP_032748188;XP_032748189;XP_032748191;XP_032748192;XP_032748193;XP_032748194;XP_032748195;XP_032748196;XP_032748197;XP_032748198;XP_032748199;XP_032748200;XP_032748202;XP_032748203;XP_032748204;XP_032748205;XP_032748206;XP_032748207;XP_032748208;XP_032748209;XP_032748210;XP_032748211;XP_032748213;XP_032748214;XP_032748215 transcription factor 7-like 2 protein-coding 625952780 Tmem86b transmembrane protein 86B ENCODES a protein that exhibits alkenylglycerophosphocholine hydrolase activity (ortholog); D-lysine 5,6-aminomutase activity (ortholog); identical protein binding (ortholog); INVOLVED IN ether lipid metabolic process (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog) 2 177206445 177209638 - 22301074;30032202 116892660 MODEL JAAIVD010000001;XM_032894482 XP_032750373 lysoplasmalogenase protein-coding 625952786 Runx2 RUNX family transcription factor 2 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); chromatin binding (ortholog); chromatin DNA binding (ortholog); INVOLVED IN BMP signaling pathway (ortholog); bone regeneration (ortholog); cell maturation (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Aortic Calcification (ortholog); Bone Fractures (ortholog); breast cancer (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 4 85131698 85258574 + 22301074;30032202 116899139 MODEL JAAIVD010000003;XM_032900676;XM_032900677 XP_032756567;XP_032756568 runt-related transcription factor 2 protein-coding 625952798 LOC116900278 olfactory receptor 1044 5 63450813 63451757 - 22301074;30032202 116900278 MODEL JAAIVD010000023;XM_032902031 XP_032757922 protein-coding 625952801 Ltb4r2 leukotriene B4 receptor 2 ENCODES a protein that exhibits leukotriene B4 receptor activity (ortholog); INVOLVED IN keratinocyte migration (ortholog); signal transduction (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) 12 69241331 69242407 - 22301074;30032202 116914091 MODEL JAAIVD010000007;XM_032918404 XP_032774295 protein-coding 625952804 LOC116903008 40S ribosomal protein S9-like 6 147156129 147156687 + 116903008 MODEL JAAIVD010000024 pseudo 625952805 LOC116884371 60S ribosomal protein L29-like 15 44362334 44362746 + 116884371 MODEL JAAIVD010000010 pseudo 625952806 Dock11 dedicator of cytokinesis 11 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN B cell homeostasis (ortholog); marginal zone B cell differentiation (ortholog); positive regulation of filopodium assembly (ortholog); ASSOCIATED WITH AUTOINFLAMMATORY DISEASE, MULTISYSTEM, WITH IMMUNE DYSREGULATION, X-LINKED (ortholog) X 102079982 102266434 + 30032202 116888459 MODEL JAAIVD010000014;XM_032889739 XP_032745630 dedicator of cytokinesis protein 11 protein-coding 625952863 LOC116899864 small nucleolar RNA SNORA17 4 133436739 133436875 - 116899864 MODEL JAAIVD010000003;XR_004387858 snorna 625952866 Klk14 kallikrein related peptidase 14 ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); INVOLVED IN epidermis morphogenesis (ortholog); fertilization (ortholog); negative regulation of G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH male infertility (ortholog); FOUND IN extracellular region (ortholog) 2 155705138 155709763 - 22301074;30032202 116894361 MODEL JAAIVD010000001;XM_032896062 XP_032751953 kallikrein-14 protein-coding 625952873 LOC116914054 farnesyl pyrophosphate synthase-like 12 77670261 77671480 - 116914054 MODEL JAAIVD010000007 pseudo 625952874 LOC116914368 protein PBDC1-like 13 77067137 77067726 - 116914368 MODEL JAAIVD010000008 pseudo 625952875 LOC116908132 uncharacterized LOC116908132 8 39155475 39156038 + 116908132 MODEL JAAIVD010000027;XR_004388876 ncrna 625952879 LOC116908917 olfactory receptor 1468-like 9 42144003 42144959 - 22301074;30032202 116908917 MODEL JAAIVD010000002;XM_032912374 XP_032768265 protein-coding 625952883 LOC116904779 small Cajal body-specific RNA 11 6 22776914 22777049 - 116904779 MODEL JAAIVD010000024;XR_004388443 ncrna 625952886 Zmpste24 zinc metallopeptidase STE24 ENCODES a protein that exhibits double-stranded DNA binding (ortholog); endopeptidase activity (ortholog); metalloendopeptidase activity (ortholog); INVOLVED IN adult walking behavior (ortholog); bone mineralization (ortholog); calcium ion import into sarcoplasmic reticulum (ortholog); ASSOCIATED WITH Acro-Osteolysis (ortholog); Craniofacial Abnormalities (ortholog); Craniomandibular Disorders (ortholog); FOUND IN membrane (ortholog); nuclear envelope (ortholog); protein-containing complex (ortholog) 1 35920320 35955055 + 22301074;30032202 116897213 MODEL JAAIVD010000025;XM_032898929;XM_032898937 XP_032754820;XP_032754828 CAAX prenyl protease 1 homolog protein-coding 625952903 Dpm1 dolichyl-phosphate mannosyltransferase subunit 1, catalytic ENCODES a protein that exhibits dolichyl-phosphate beta-D-mannosyltransferase activity (ortholog); INVOLVED IN dolichol phosphate mannose biosynthetic process (ortholog); dolichyl monophosphate biosynthetic process (ortholog); GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH congenital disorder of glycosylation Ie (ortholog); genetic disease (ortholog); FOUND IN dolichol-phosphate-mannose synthase complex (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 5 149779649 149797704 + 22301074;30032202 116902302 MODEL JAAIVD010000023;XM_032904746 XP_032760637 dolichol-phosphate mannosyltransferase subunit 1 protein-coding 625952916 LOC116890221 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4-like 1 267490787 267491225 - 116890221 MODEL JAAIVD010000025 pseudo 625952917 LOC116913600 ADP/ATP translocase 2-like 12 51749487 51750542 + 116913600 MODEL JAAIVD010000007 pseudo 625952918 Pacs2 phosphofurin acidic cluster sorting protein 2 INVOLVED IN autophagosome assembly (ortholog); endoplasmic reticulum calcium ion homeostasis (ortholog); mitochondrion-endoplasmic reticulum membrane tethering (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 1 (ortholog); developmental and epileptic encephalopathy 66 (ortholog); epilepsy (ortholog); FOUND IN endoplasmic reticulum (ortholog) 7 130620825 130679831 + 30032202 116905527 MODEL JAAIVD010000026;XM_032908553;XM_032908554;XM_032908556 XP_032764444;XP_032764445;XP_032764447 protein-coding 625952954 Creg1 cellular repressor of E1A stimulated genes 1 ENCODES a protein that exhibits insulin-like growth factor receptor binding (ortholog); INVOLVED IN autophagy (ortholog); endocytosis (ortholog); lysosomal lumen acidification (ortholog); ASSOCIATED WITH COVID-19 (ortholog); diastolic heart failure (ortholog); Prostatic Neoplasms (ortholog); FOUND IN endosome (ortholog); extracellular region (ortholog); lysosome (ortholog) 10 44868093 44879271 + 116911470 MODEL JAAIVD010000005;XM_032915451;XM_032915453 XP_032771342;XP_032771344 protein CREG1 protein-coding 625952966 LOC116895287 dnaJ homolog subfamily B member 3-like 3 14258082 14263940 + 30032202 116895287 MODEL JAAIVD010000012;XM_032896598 XP_032752489 protein-coding 625952972 Parp6 poly(ADP-ribose) polymerase family member 6 ENCODES a protein that exhibits NAD+-protein-aspartate ADP-ribosyltransferase activity (ortholog); NAD+-protein-cysteine ADP-ribosyltransferase activity (ortholog); INVOLVED IN positive regulation of dendrite morphogenesis (ortholog); protein auto-ADP-ribosylation (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; ASSOCIATED WITH Neurodevelopmental Disorders (ortholog) 8 53457033 53489104 + 22301074;30032202 116906649 MODEL JAAIVD010000027;XM_032909427;XM_032909428;XM_032909429;XM_032909430;XM_032909431;XM_032909432;XR_004388758;XR_004388759;XR_004388760;XR_004388761 XP_032765318;XP_032765319;XP_032765320;XP_032765321;XP_032765322;XP_032765323 protein mono-ADP-ribosyltransferase PARP6 protein-coding 625953019 LOC116910077 keratin-associated protein 4-3-like 9 54587230 54587802 - 22301074;30032202 116910077 MODEL JAAIVD010000002;XM_032913893 XP_032769784 protein-coding 625953022 Marchf2 membrane associated ring-CH-type finger 2 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); antiviral innate immune response (ortholog); positive regulation of lysosomal protein catabolic process (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); endoplasmic reticulum (ortholog) 1 158691245 158716147 + 22301074;30032202 116907113 MODEL JAAIVD010000025;XM_032910091;XM_032910097;XM_032910104 XP_032765982;XP_032765988;XP_032765995 E3 ubiquitin-protein ligase MARCH2 protein-coding 625953036 LOC116895780 chymosin-like 3 51020639 51041061 + 22301074;30032202 116895780 MODEL JAAIVD010000012;XM_032896929 XP_032752820 protein-coding 625953050 LOC116895741 39S ribosomal protein L54, mitochondrial-like 3 34336123 34336583 + 116895741 MODEL JAAIVD010000012 pseudo 625953051 Kbtbd11 kelch repeat and BTB domain containing 11 ASSOCIATED WITH hepatocellular carcinoma (ortholog) 13 68794950 68799405 - 22301074 116914603 MODEL JAAIVD010000008;XM_032918967 XP_032774858 kelch repeat and BTB domain-containing protein 11 protein-coding 625953056 Cgrrf1 cell growth regulator with ring finger domain 1 INVOLVED IN negative regulation of cell growth (ortholog); FOUND IN endoplasmic reticulum (ortholog); nucleoplasm (ortholog) 12 76204128 76226233 - 30032202 116913612 MODEL JAAIVD010000007;XM_032917863 XP_032773754 cell growth regulator with RING finger domain protein 1 protein-coding 625953066 LOC116891042 keratin-associated protein 5-4-like 2 7394631 7396254 + 116891042 MODEL JAAIVD010000001 pseudo 625953067 LOC116911798 olfactory receptor 10X1-like 10 52985399 52986331 + 22301074 116911798 MODEL JAAIVD010000005;XM_032915800 XP_032771691 protein-coding 625953070 Ankrd2 ankyrin repeat domain 2 ENCODES a protein that exhibits chromatin binding (ortholog); protein kinase B binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN negative regulation of myoblast differentiation (ortholog); negative regulation of myotube differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); euchromatin (ortholog) 2 41150079 41159588 + 30032202 116893797 MODEL JAAIVD010000001;XM_032895501;XM_032895502 XP_032751392;XP_032751393 ankyrin repeat domain-containing protein 2 protein-coding 625953087 LOC116911089 olfactory receptor 6C6-like 1 161866257 161867818 + 116911089 MODEL JAAIVD010000025 pseudo 625953088 Noct nocturnin ENCODES a protein that exhibits mRNA binding (ortholog); NADP phosphatase activity (ortholog); NADPH phosphatase activity (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); deadenylation-dependent decapping of nuclear-transcribed mRNA (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 3 103203157 103223709 - 22301074 116896894 MODEL JAAIVD010000012;XM_032898440 XP_032754331 protein-coding 625953095 Cep112 centrosomal protein 112 ENCODES a protein that exhibits molecular condensate scaffold activity (ortholog); INVOLVED IN gene expression (ortholog); receptor localization to synapse (ortholog); regulation of translation (ortholog); ASSOCIATED WITH spermatogenic failure 44 (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); inhibitory synapse (ortholog) 9 70281846 70718653 - 116910355 MODEL JAAIVD010000002;XM_032914210 XP_032770101 centrosomal protein of 112 kDa protein-coding 625953123 Znf764 zinc finger protein 764 ENCODES a protein that exhibits transcription coregulator activity (ortholog); INVOLVED IN cellular response to glucocorticoid stimulus (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); FOUND IN nucleus (ortholog) 2 74497654 74500341 + 30032202 116891472 MODEL JAAIVD010000001;XM_032892571 XP_032748462 protein-coding 625953130 LOC116890581 small nucleolar RNA SNORA17 1 89221132 89221267 - 116890581 MODEL JAAIVD010000025;XR_004386743 snorna 625953133 Fam167a family with sequence similarity 167 member A 12 60929312 60956195 - 116913773 MODEL JAAIVD010000007;XM_032918078;XM_032918079 XP_032773969;XP_032773970 protein FAM167A protein-coding 625953144 LOC116894913 U7 small nuclear RNA 2 143502534 143502593 - 116894913 MODEL JAAIVD010000001;XR_004387115 snrna 625953147 LOC116900261 olfactory receptor 5M10-like 5 63188171 63189118 + 22301074;30032202 116900261 MODEL JAAIVD010000023;XM_032902013 XP_032757904 protein-coding 625953150 Nptx1 neuronal pentraxin 1 INVOLVED IN axonogenesis involved in innervation (ortholog); cellular response to glucose stimulus (ortholog); cellular response to potassium ion (ortholog); ASSOCIATED WITH genetic disease (ortholog); Spinocerebellar Ataxia 50 (ortholog); FOUND IN glutamatergic synapse (ortholog); synaptic cleft (ortholog) 9 64469033 64478286 + 30032202 116909392 MODEL JAAIVD010000002;XM_032912954 XP_032768845 neuronal pentraxin-1 protein-coding 625953159 Plin3 perilipin 3 INVOLVED IN cellular response to glucose starvation (ortholog); lipid droplet disassembly (ortholog); lipid storage (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN lipid droplet (ortholog) 4 87670332 87681479 - 30032202 116899179 MODEL JAAIVD010000003;XM_032900750 XP_032756641 perilipin-3 protein-coding 625953171 Khdc3l KH domain containing 3 like, subcortical maternal complex member ENCODES a protein that exhibits structural constituent of cytoplasmic lattice (ortholog); INVOLVED IN actin filament organization (ortholog); establishment of organelle localization (ortholog); mitotic spindle assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); Hydatidiform Mole (ortholog); Hydatidiform Mole, Recurrent, 2 (ortholog); FOUND IN apical cortex (ortholog); cell cortex (ortholog); centrosome (ortholog) 8 67442598 67444518 + 22301074;30032202 116907823 MODEL JAAIVD010000027;XM_032911003 XP_032766894 KHDC3-like protein protein-coding 625953178 LOC116910860 FANCD2 opposite strand protein-like 10 28644720 28645262 + 116910860 MODEL JAAIVD010000005;XM_032914621 XP_032770512 protein-coding 625953181 Brinp2 BMP/retinoic acid inducible neural specific 2 INVOLVED IN cellular response to retinoic acid (ortholog); central nervous system neuron differentiation (ortholog); locomotion (ortholog); ASSOCIATED WITH oral squamous cell carcinoma (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog) 10 37575518 37681593 - 22301074;30032202 116911734 MODEL JAAIVD010000005;XM_032915713;XM_032915714 XP_032771604;XP_032771605 BMP/retinoic acid-inducible neural-specific protein 2 protein-coding 625953196 Psme2 proteasome activator subunit 2 ENCODES a protein that exhibits endopeptidase activator activity (ortholog); identical protein binding (ortholog); INVOLVED IN antigen processing and presentation of exogenous antigen (ortholog); regulation of proteasomal protein catabolic process (ortholog); ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); human immunodeficiency virus infectious disease (ortholog) 12 69416256 69420080 + 22301074;30032202 116913314 MODEL JAAIVD010000007;XM_032917457 XP_032773348 proteasome activator complex subunit 2 protein-coding 625953211 LOC116906048 protein HEXIM2-like 7 46282118 46290087 - 116906048 MODEL JAAIVD010000026 pseudo 625953212 LOC116906424 small nucleolar RNA SNORA58 7 101534226 101534360 - 116906424 MODEL JAAIVD010000026;XR_004388686 snorna 625953215 LOC116897433 U6 spliceosomal RNA 3 26378172 26378278 + 116897433 MODEL JAAIVD010000012;XR_004387474 snrna 625953218 Chchd3 coiled-coil-helix-coiled-coil-helix domain containing 3 ENCODES a protein that exhibits molecular adaptor activity (ortholog); phosphatase binding (ortholog); INVOLVED IN cristae formation (ortholog); inner mitochondrial membrane organization (ortholog); mitochondrial fusion (ortholog); PARTICIPATES IN mitochondrial protein import pathway; ASSOCIATED WITH substance-related disorder (ortholog); FOUND IN MICOS complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 6 106611041 106862836 + 22301074;30032202 116903988 MODEL JAAIVD010000024;XM_032906793;XM_032906795 XP_032762684;XP_032762686 MICOS complex subunit MIC19 protein-coding 625953232 Kcnk12 potassium two pore domain channel subfamily K member 12 ENCODES a protein that exhibits identical protein binding (ortholog); potassium channel activity (ortholog); protein heterodimerization activity (ortholog); ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) 7 5186691 5234340 + 22301074;30032202 116905744 MODEL JAAIVD010000026;XM_032908712 XP_032764603 potassium channel subfamily K member 12 protein-coding 625953238 LOC116892412 zinc finger protein 780A-like 2 168089739 168110289 - 30032202 116892412 MODEL JAAIVD010000001;XM_032894091 XP_032749982 protein-coding 625953245 Cdc25c cell division cycle 25C ENCODES a protein that exhibits protein kinase binding (ortholog); protein serine/threonine kinase binding (ortholog); WW domain binding (ortholog); INVOLVED IN G2/M transition of mitotic cell cycle (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH breast cancer (ortholog); cervical cancer (ortholog); endometrial cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial intermembrane space (ortholog); nuclear speck (ortholog) 15 9606138 9625959 + 22301074;30032202 116884538 MODEL JAAIVD010000010;XM_032885675 XP_032741566 M-phase inducer phosphatase 3 protein-coding 625953263 LOC116894020 olfactory receptor 52A5-like 2 101940704 101941654 - 22301074 116894020 MODEL JAAIVD010000001;XM_032895736 XP_032751627 protein-coding 625953266 Tent5a terminal nucleotidyltransferase 5A ENCODES a protein that exhibits poly(A) RNA polymerase activity (ortholog); INVOLVED IN positive regulation of bone mineralization (ortholog); positive regulation of osteoblast differentiation (ortholog); regulation of ossification (ortholog); ASSOCIATED WITH esophageal atresia (ortholog); lung non-small cell carcinoma (ortholog); major depressive disorder (ortholog); FOUND IN cytoplasm (ortholog) 8 79385102 79391901 - 22301074;30032202 116906996 MODEL JAAIVD010000027;XM_032909923;XM_032909924 XP_032765814;XP_032765815 protein-coding 625953276 Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 ENCODES a protein that exhibits hydroxymethylglutaryl-CoA synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN acetyl-CoA metabolic process (ortholog); adipose tissue development (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH Colonic Neoplasms (ortholog); congestive heart failure (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 3 59008523 59032323 - 22301074;30032202 116896481 MODEL JAAIVD010000012;XM_032897646 XP_032753537 hydroxymethylglutaryl-CoA synthase, mitochondrial protein-coding 625953289 Sphk1 sphingosine kinase 1 ENCODES a protein that exhibits acetyltransferase activity (ortholog); ATP binding (ortholog); calmodulin binding (ortholog); INVOLVED IN blood vessel development (ortholog); brain development (ortholog); calcium-mediated signaling (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Fibrosis (ortholog); high grade glioma (ortholog); FOUND IN axon (ortholog); clathrin-coated pit (ortholog); cytoplasm (ortholog) 9 67541543 67547255 - 30032202 116910150 MODEL JAAIVD010000002;XM_032913998;XM_032913999;XM_032914000;XM_032914002;XM_032914003;XM_032914004 XP_032769889;XP_032769890;XP_032769891;XP_032769893;XP_032769894;XP_032769895 protein-coding 625953314 LOC116902572 5S ribosomal RNA 5 42855049 42855167 - 116902572 MODEL JAAIVD010000023 pseudo 625953315 LOC116904332 aspartate aminotransferase, mitochondrial-like 6 64978400 64978972 - 22301074;30032202 116904332 MODEL JAAIVD010000024;XM_032907238 XP_032763129 protein-coding 625953319 Sco2 synthesis of cytochrome C oxidase 2 ENCODES a protein that exhibits protein-disulfide reductase activity (ortholog); INVOLVED IN copper ion homeostasis (ortholog); eye development (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); cytochrome-c oxidase deficiency disease (ortholog); Human Influenza (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); myofibril (ortholog) 1 258670841 258672849 - 22301074;30032202 116915068 MODEL JAAIVD010000025;XM_032919487;XM_032919495;XM_032919504;XM_032919510 XP_032775378;XP_032775386;XP_032775395;XP_032775401 LOC116915068 APPROVED protein-coding 625953334 Nlrp1 NLR family pyrin domain containing 1 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); cysteine-type endopeptidase activator activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to UV-B (ortholog); defense response to bacterium (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; ASSOCIATED WITH Autoinflammation with Arthritis and Dyskeratosis (ortholog); genetic disease (ortholog); Multiple Self-healing Palmoplantar Carcinoma (ortholog); FOUND IN canonical inflammasome complex (ortholog); cytosol (ortholog); neuronal cell body (ortholog) 9 44189621 44233675 + 22301074;30032202 116910287 MODEL JAAIVD010000002;XM_032914159 XP_032770050 NACHT, LRR and PYD domains-containing protein 1 protein-coding 625953353 Gtpbp8 GTP binding protein 8 (putative) FOUND IN mitochondrion (ortholog) 4 29604645 29614390 - 22301074;30032202 116898868 MODEL JAAIVD010000003;XM_032900236 XP_032756127 GTP-binding protein 8 protein-coding 625953363 LOC116892964 nucleophosmin-like 2 213448531 213449372 + 116892964 MODEL JAAIVD010000001 pseudo 625953364 LOC116894872 U6 spliceosomal RNA 2 4173898 4174001 - 116894872 MODEL JAAIVD010000001;XR_004387084 snrna 625953367 Polr3gl RNA polymerase III subunit GL ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH Dwarfism (ortholog); hyperostosis (ortholog); SHORT STATURE, OLIGODONTIA, DYSMORPHIC FACIES, AND MOTOR DELAY (ortholog); FOUND IN nucleus (ortholog); RNA polymerase III complex (ortholog) 3 60712181 60727750 + 22301074;30032202 116896508 MODEL JAAIVD010000012;XM_032897689;XM_032897690 XP_032753580;XP_032753581 DNA-directed RNA polymerase III subunit RPC7-like;RNA polymerase III subunit G like protein-coding 625953382 Pspn persephin ENCODES a protein that exhibits growth factor activity (ortholog); INVOLVED IN branching involved in ureteric bud morphogenesis (ortholog); glial cell-derived neurotrophic factor receptor signaling pathway (ortholog); FOUND IN extracellular region (ortholog) 4 88380512 88381486 - 22301074;30032202 116899205 MODEL JAAIVD010000003;XM_032900794 XP_032756685 protein-coding 625953388 LOC116883967 spermatogenesis-associated protein 31 14 74697003 74702858 - 116883967 MODEL JAAIVD010000009;XM_032885205;XM_032885207 XP_032741096;XP_032741098 protein-coding 625953400 Anapc11 anaphase promoting complex subunit 11 ENCODES a protein that exhibits cullin family protein binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); positive regulation of mitotic metaphase/anaphase transition (ortholog); protein branched polyubiquitination (ortholog); FOUND IN anaphase-promoting complex (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 9 63416798 63425236 - 22301074;30032202 116908805 MODEL JAAIVD010000002;XM_032912206;XM_032912207 XP_032768097;XP_032768098 anaphase-promoting complex subunit 11 protein-coding 625953410 Rad51ap1 RAD51 associated protein 1 ENCODES a protein that exhibits D-loop DNA binding (ortholog); DNA binding (ortholog); DNA secondary structure binding (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); DNA damage response (ortholog); DNA recombination (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); nucleus (ortholog) 6 20966639 20979701 + 30032202 116903238 MODEL JAAIVD010000024;XM_032905616 XP_032761507 RAD51-associated protein 1 protein-coding 625953423 LOC116910639 U6 spliceosomal RNA 9 55569794 55569895 + 116910639 MODEL JAAIVD010000002;XR_004389177 snrna 625953426 LOC116902512 small nucleolar RNA SNORA71 5 137728893 137729025 + 116902512 MODEL JAAIVD010000023;XR_004388121 snorna 625953429 Mrgprd MAS related GPR family member D ENCODES a protein that exhibits G protein-coupled peptide receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); angiotensin-mediated vasodilation involved in regulation of systemic arterial blood pressure (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); FOUND IN plasma membrane (ortholog) 2 4415075 4420408 - 22301074;30032202 116893603 MODEL JAAIVD010000001;XM_032895311 XP_032751202 mas-related G-protein coupled receptor member D protein-coding 625953434 Pex10 peroxisomal biogenesis factor 10 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN cellular response to reactive oxygen species (ortholog); peroxisome organization (ortholog); protein import into peroxisome matrix (ortholog); ASSOCIATED WITH genetic disease (ortholog); infantile Refsum disease (ortholog); peroxisomal biogenesis disorder (ortholog); FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog) 1 5647106 5653305 - 30032202 116892044 MODEL JAAIVD010000025;XM_032893512 XP_032749403 peroxisome biogenesis factor 10 protein-coding 625953444 LOC116897456 U6 spliceosomal RNA 3 11638960 11639063 + 116897456 MODEL JAAIVD010000012;XR_004387487 snrna 625953447 Eral1 Era like 12S mitochondrial rRNA chaperone 1 ENCODES a protein that exhibits ribosomal small subunit binding (ortholog); RNA folding chaperone (ortholog); rRNA binding (ortholog); INVOLVED IN mitochondrial small ribosomal subunit assembly (ortholog); ribosomal small subunit assembly (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Hearing Loss (ortholog); Perrault syndrome (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 9 92364705 92371909 + 22301074;30032202 116909830 MODEL JAAIVD010000002;XM_032913547;XM_032913548 XP_032769438;XP_032769439 GTPase Era, mitochondrial protein-coding 625953462 LOC116891476 U1 small nuclear ribonucleoprotein C-like 1 52829984 52830507 + 22301074;30032202 116891476 MODEL JAAIVD010000025;XM_032892619 XP_032748510 protein-coding 625953466 LOC116889630 60S ribosomal protein L18-like Y 1956417 1956966 + 116889630 MODEL JAAIVD010000015 pseudo 625953467 LOC116910115 olfactory receptor 1D2-like 9 33669994 33670935 + 22301074;30032202 116910115 MODEL JAAIVD010000002;XM_032913945 XP_032769836 protein-coding 625953470 LOC116888241 high mobility group protein B4-like X 90303671 90304678 + 116888241 MODEL JAAIVD010000014 pseudo 625953471 LOC116907317 olfactory receptor 150-like 8 82564766 82565710 + 22301074;30032202 116907317 MODEL JAAIVD010000027;XM_032910262 XP_032766153 protein-coding 625953475 Fancf FA complementation group F ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN DNA damage response (ortholog); ovarian follicle development (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH adenocarcinoma in situ (ortholog); breast cancer (ortholog); disease of cellular proliferation (ortholog); FOUND IN chromatin (ortholog); Fanconi anaemia nuclear complex (ortholog); nucleoplasm (ortholog) 2 148786293 148787978 + 22301074;30032202 116892064 MODEL JAAIVD010000001;XM_032893535 XP_032749426 Fanconi anemia group F protein protein-coding 625953480 Ago2 argonaute RISC catalytic component 2 ENCODES a protein that exhibits core promoter sequence-specific DNA binding (ortholog); double-stranded RNA binding (ortholog); endoribonuclease activity, cleaving miRNA-paired mRNA (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); gene expression (ortholog); miRNA metabolic process (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH alcohol dependence (ortholog); Cocaine-Related Disorders (ortholog); genetic disease (ortholog); FOUND IN chromatoid body (ortholog); cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog) 1 245887801 245924414 - 22301074 116912384 MODEL JAAIVD010000025;XM_032916445 XP_032772336 protein argonaute-2 protein-coding 625953502 Acod1 aconitate decarboxylase 1 ENCODES a protein that exhibits aconitate decarboxylase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to cocaine (ortholog); cellular response to interferon-beta (ortholog); cellular response to interleukin-1 (ortholog); ASSOCIATED WITH esophageal carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); Invasive Breast Carcinoma (ortholog); FOUND IN mitochondrion (ortholog) 12 21666272 21674861 - 22301074;30032202 116913978 MODEL JAAIVD010000007;XM_032918250 XP_032774141 cis-aconitate decarboxylase protein-coding 625953511 Spaca3 sperm acrosome associated 3 ENCODES a protein that exhibits lysozyme activity (ortholog); INVOLVED IN fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); sperm-egg recognition (ortholog); FOUND IN acrosomal matrix (ortholog); acrosomal membrane (ortholog); acrosomal vesicle (ortholog) 9 89571010 89574043 - 22301074;30032202 116910408 MODEL JAAIVD010000002;XM_032914250 XP_032770141 sperm acrosome membrane-associated protein 3 protein-coding 625953518 LOC116894647 vomeronasal type-2 receptor 26-like 2 199454631 199473125 + 116894647 MODEL JAAIVD010000001 pseudo 625953519 LOC116885826 ubiquitin-conjugating enzyme E2 C-like 16 11232929 11238379 + 116885826 MODEL JAAIVD010000004 pseudo 625953520 Ncf2 neutrophil cytosolic factor 2 ENCODES a protein that exhibits small GTPase binding (ortholog); superoxide-generating NAD(P)H oxidase activity (ortholog); superoxide-generating NADPH oxidase activator activity (ortholog); INVOLVED IN cellular response to hormone stimulus (ortholog); positive regulation of blood pressure (ortholog); positive regulation of neuron apoptotic process (ortholog); ASSOCIATED WITH Acute Otitis Media (ortholog); Alzheimer's disease (ortholog); autosomal recessive chronic granulomatous disease 2 (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); cytosol (ortholog) 10 32270049 32298799 + 22301074;30032202 116911746 MODEL JAAIVD010000005;XM_032915738 XP_032771629 neutrophil cytosol factor 2 protein-coding 625953539 Rrbp1 ribosome binding protein 1 INVOLVED IN signal transduction (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 5 123600841 123662783 - 22301074;30032202 116902039 MODEL JAAIVD010000023;XM_032904322 XP_032760213 ribosome-binding protein 1 protein-coding 625953567 LOC116886716 ATP-dependent RNA helicase DDX19A 17 30673738 30694176 - 22301074;30032202 116886716 MODEL JAAIVD010000011;XM_032888226;XM_032888227 XP_032744117;XP_032744118 protein-coding 625953587 LOC116889012 rab GDP dissociation inhibitor beta-like X 15970392 15971902 + 116889012 MODEL JAAIVD010000014 pseudo 625953588 LOC116895902 40S ribosomal protein S6-like 3 120464524 120465097 + 116895902 MODEL JAAIVD010000012 pseudo 625953589 Zfpm1 zinc finger protein, FOG family member 1 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN atrial septum morphogenesis (ortholog); atrioventricular valve morphogenesis (ortholog); cardiac muscle tissue morphogenesis (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) 17 41954965 41968891 + 30032202 116886171 MODEL JAAIVD010000011;XM_032887543 XP_032743434 zinc finger protein ZFPM1 protein-coding 625953600 Urb1 URB1 ribosome biogenesis factor FOUND IN fibrillar center (ortholog); nucleolus (ortholog) 4 53776092 53836502 + 30032202 116899007 MODEL JAAIVD010000003;XM_032900456 XP_032756347 URB1 ribosome biogenesis homolog;nucleolar pre-ribosomal-associated protein 1 protein-coding 625953643 LOC116883975 ankyrin repeat domain-containing protein 26-like 14 26295265 26494510 + 22301074 116883975 MODEL JAAIVD010000009;XM_032885209 XP_032741100 protein-coding 625953682 Impact impact RWD domain protein ENCODES a protein that exhibits actin binding (ortholog); protein sequestering activity (ortholog); ribosome binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); GCN2-mediated signaling (ortholog); intracellular signal transduction (ortholog); FOUND IN cytoplasm (ortholog) 15 30709818 30738520 - 22301074;30032202 116884850 MODEL JAAIVD010000010;XM_032886095 XP_032741986 protein IMPACT protein-coding 625953699 Magee1 MAGE family member E1 ASSOCIATED WITH bile duct disease (ortholog); COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN dendrite (ortholog); nucleus (ortholog); perinuclear region of cytoplasm (ortholog) X 64943273 64946802 + 30032202 116889292 MODEL JAAIVD010000014;XM_032890423 XP_032746314 melanoma-associated antigen E1 protein-coding 625953704 LOC116896699 uncharacterized LOC116896699 3 65334182 65343165 - 116896699 MODEL JAAIVD010000012;XR_004387357 ncrna 625953710 Scaf8 SR-related CTD associated factor 8 ENCODES a protein that exhibits protein domain specific binding (ortholog); RNA binding (ortholog); RNA polymerase binding (ortholog); INVOLVED IN mRNA processing (ortholog); negative regulation of termination of RNA polymerase II transcription, poly(A)-coupled (ortholog); positive regulation of DNA-templated transcription, elongation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN nuclear matrix (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 195511355 195640186 - 22301074;30032202 116892863 MODEL JAAIVD010000001;XM_032894760;XM_032894762;XM_032894763;XM_032894764;XM_032894765 XP_032750651;XP_032750653;XP_032750654;XP_032750655;XP_032750656 SR-related and CTD-associated factor 8 protein-coding 625953746 LOC116893097 28S ribosomal protein L42, mitochondrial-like 2 61530094 61530589 - 116893097 MODEL JAAIVD010000001 pseudo 625953747 LOC116897538 small nucleolar RNA SNORA17 3 220284107 220284238 + 116897538 MODEL JAAIVD010000012;XR_004387552 snorna 625953750 Tubgcp4 tubulin gamma complex component 4 ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); microcephaly and chorioretinopathy 1 (ortholog); FOUND IN centrosome (ortholog); recycling endosome (ortholog) 5 99325156 99351966 + 22301074;30032202 116901857 MODEL JAAIVD010000023;XM_032904052;XM_032904054 XP_032759943;XP_032759945 gamma-tubulin complex component 4;tubulin gamma complex associated protein 4 protein-coding 625953776 LOC116894475 cytochrome P450 2F2 2 168806350 168819957 - 22301074;30032202 116894475 MODEL JAAIVD010000001;XM_032896186 XP_032752077 protein-coding 625953790 LOC116897422 U6 spliceosomal RNA 3 118224582 118224686 - 116897422 MODEL JAAIVD010000012;XR_004387464 snrna 625953793 Alms1 ALMS1 centrosome and basal body associated protein ENCODES a protein that exhibits alpha-actinin binding (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cholesterol homeostasis (ortholog); cilium assembly (ortholog); ASSOCIATED WITH Alstrom syndrome (ortholog); Bardet-Biedl syndrome (ortholog); cone-rod dystrophy (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 6 60507141 60608606 - 30032202 116903568 MODEL JAAIVD010000024;XM_032906187 XP_032762078 Alstrom syndrome protein 1 protein-coding 625953820 LOC116907720 uncharacterized LOC116907720 8 56977000 56978256 + 116907720 MODEL JAAIVD010000027;XR_004388839 ncrna 625953824 Znf551 zinc finger protein 551 8 3369456 3379842 + 30032202 116907049 MODEL JAAIVD010000027;XM_032910004 XP_032765895 protein-coding 625953832 Fzd4 frizzled class receptor 4 ENCODES a protein that exhibits amyloid-beta binding (ortholog); cytokine binding (ortholog); cytokine receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); blood vessel development (ortholog); canonical Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling pathway; ASSOCIATED WITH Arachnodactyly (ortholog); cleft palate (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN cell surface (ortholog); cell-cell junction (ortholog); dendrite (ortholog) 2 111737629 111742657 - 22301074;30032202 116891862 MODEL JAAIVD010000001;XM_032893262 XP_032749153 frizzled-4 protein-coding 625953838 Il27 interleukin 27 ENCODES a protein that exhibits interleukin-27 receptor binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN positive regulation of defense response to virus by host (ortholog); positive regulation of type II interferon production (ortholog); regulation of T cell proliferation (ortholog); PARTICIPATES IN interleukin-27 signaling pathway; ASSOCIATED WITH Acute-On-Chronic Liver Failure (ortholog); Arenaviridae infectious disease (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog) 2 75329391 75335962 + 30032202 116893124 MODEL JAAIVD010000001;XM_032895059 XP_032750950 interleukin-27 subunit alpha protein-coding 625953845 LOC116898925 acetyl-CoA acetyltransferase, cytosolic-like 4 43775610 43777500 - 116898925 MODEL JAAIVD010000003 pseudo 625953846 LOC116910400 olfactory receptor 3A1-like 9 93054554 93055513 - 22301074;30032202 116910400 MODEL JAAIVD010000002;XM_032914240 XP_032770131 protein-coding 625953850 LOC116906149 ornithine decarboxylase-like 7 94569631 94570832 - 116906149 MODEL JAAIVD010000026 pseudo 625953851 Gnaq G protein subunit alpha q ENCODES a protein that exhibits alkylglycerophosphoethanolamine phosphodiesterase activity (ortholog); G protein activity (ortholog); GTPase activator activity (ortholog); INVOLVED IN action potential (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cellular response to acidic pH (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphaq protein family; angiotensin II signaling pathway via AT1 receptor; eicosanoid signaling pathway; ASSOCIATED WITH Albuminuria (ortholog); blood coagulation disease (ortholog); Cardiomegaly (ortholog); FOUND IN caveola (ortholog); cell body (ortholog); cytoplasmic side of plasma membrane (ortholog) 2 16066871 16308154 + 22301074;30032202 116891004 MODEL JAAIVD010000001;XM_032891682 XP_032747573 guanine nucleotide-binding protein G(q) subunit alpha protein-coding 625953862 LOC116888536 uncharacterized LOC116888536 1 94227734 94234423 + 116888536 MODEL JAAIVD010000025;XR_004386319;XR_004386320 ncrna 625953869 Hcar1 hydroxycarboxylic acid receptor 1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); negative regulation of lipid catabolic process (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) 16 29976665 29977928 + 22301074 116885605 MODEL JAAIVD010000004;XM_032886907 XP_032742798 protein-coding 625953873 LOC116893687 glycine N-acyltransferase-like protein Keg1 2 12747252 12758940 + 22301074;30032202 116893687 MODEL JAAIVD010000001;XM_032895404 XP_032751295 protein-coding 625953880 LOC116889033 uncharacterized LOC116889033 X 19024677 19025304 + 116889033 MODEL JAAIVD010000014 pseudo 625953881 Tmem190 transmembrane protein 190 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); FOUND IN inner acrosomal membrane (ortholog) 2 177359212 177360749 + 30032202 116892669 MODEL JAAIVD010000001;XM_032894496 XP_032750387 protein-coding 625953889 LOC116895988 ubiquitin-associated protein 2-like 3 165256246 165259414 - 116895988 MODEL JAAIVD010000012 pseudo 625953890 LOC116901732 protein SEC13 homolog 5 88893494 88894447 - 116901732 MODEL JAAIVD010000023 pseudo 625953891 Mier1 MIER1 transcriptional regulator ENCODES a protein that exhibits histone deacetylase activity (ortholog); histone deacetylase binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); regulation of DNA-templated transcription (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) 1 51415147 51467485 - 30032202 116899512 MODEL JAAIVD010000025;XM_032901371;XM_032901379;XM_032901388;XM_032901397;XM_032901405;XM_032901414;XM_032901423;XM_032901433;XM_032901442;XM_032901448 XP_032757262;XP_032757270;XP_032757279;XP_032757288;XP_032757296;XP_032757305;XP_032757314;XP_032757324;XP_032757333;XP_032757339 mesoderm induction early response protein 1 protein-coding 625953934 C9H16orf96 chromosome 9 C16orf96 homolog 9 17036136 17080032 - 116910088 MODEL JAAIVD010000002;XM_032913910 XP_032769801 uncharacterized protein C16orf96 homolog protein-coding 625953953 Izumo3 IZUMO family member 3 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN acrosome assembly (ortholog); FOUND IN inner acrosomal membrane (ortholog) 1 61135140 61137393 + 116887838 MODEL JAAIVD010000025;XM_032889350 XP_032745241 izumo sperm-egg fusion protein 3 protein-coding 625953962 Ccdc163 CCDC163 homolog 1 40346295 40351543 + 116898467 MODEL JAAIVD010000025;XM_032899722 XP_032755613 coiled-coil domain containing 163;transmembrane protein CCDC163 protein-coding 625953976 Ferd3l Fer3 like bHLH transcription factor ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell development (ortholog); floor plate development (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN nucleus (ortholog) 7 47272100 47272983 + 22301074;30032202 116905011 MODEL JAAIVD010000026;XM_032907698 XP_032763589 fer3-like protein protein-coding 625953981 LOC116915197 small nucleolar RNA SNORA48 13 62296174 62296317 - 116915197 MODEL JAAIVD010000008;XR_004389851 snorna 625953984 LOC116890240 olfactory receptor 8S1-like 1 271267477 271268412 + 22301074 116890240 MODEL JAAIVD010000025;XM_032890968 XP_032746859 protein-coding 625953987 Dyrk4 dual specificity tyrosine phosphorylation regulated kinase 4 6 20981521 21022293 + 22301074;30032202 116904583 MODEL JAAIVD010000024;XM_032907378 XP_032763269 dual specificity tyrosine-phosphorylation-regulated kinase 4 protein-coding 625954005 LOC116884407 40S ribosomal protein S7-like 15 67150640 67151510 + 116884407 MODEL JAAIVD010000010 pseudo 625954006 Gcsam germinal center associated signaling and motility ENCODES a protein that exhibits actin binding (ortholog); myosin II binding (ortholog); protein kinase binding (ortholog); INVOLVED IN negative regulation of lymphocyte migration (ortholog); regulation of B cell receptor signaling pathway (ortholog) 4 30340757 30349309 + 22301074;30032202 116897889 MODEL JAAIVD010000003;XM_032899294;XM_032899295 XP_032755185;XP_032755186 germinal center-associated signaling and motility protein protein-coding 625954019 LOC116895325 mitochondrial import inner membrane translocase subunit Tim23-like 3 33049460 33050066 + 116895325 MODEL JAAIVD010000012 pseudo 625954020 LOC116897518 U1 spliceosomal RNA 3 63055444 63055596 + 116897518 MODEL JAAIVD010000012 pseudo 625954021 LOC116895027 small nucleolar RNA SNORA17 2 112933190 112933321 - 116895027 MODEL JAAIVD010000001;XR_004387213 snorna 625954024 LOC116903122 receptor-interacting serine/threonine-protein kinase 2 1 125980797 125994654 - 22301074;30032202 116903122 MODEL JAAIVD010000025;XM_032905475 XP_032761366 protein-coding 625954032 LOC116897419 U6 spliceosomal RNA 3 144412597 144412703 - 116897419 MODEL JAAIVD010000012;XR_004387461 snrna 625954035 LOC116910696 small nucleolar RNA SNORA48 9 49280757 49280904 - 116910696 MODEL JAAIVD010000002;XR_004389224 snorna 625954038 Rab25 RAB25, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); myosin V binding (ortholog); INVOLVED IN epithelial cell morphogenesis (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of epithelial cell migration (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease type 2 (ortholog); FOUND IN cytoplasmic vesicle (ortholog); plasma membrane (ortholog); pseudopodium (ortholog) 3 65015458 65021697 + 22301074;30032202 116896683 MODEL JAAIVD010000012;XM_032898067 XP_032753958 ras-related protein Rab-25 protein-coding 625954047 Hlx H2.0 like homeobox ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); INVOLVED IN animal organ development (ortholog); embryonic digestive tract morphogenesis (ortholog); enteric nervous system development (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH childhood-onset asthma (ortholog) 10 62895813 62901408 - 22301074;30032202 116911247 MODEL JAAIVD010000005;XM_032915148 XP_032771039 H2.0-like homeobox protein protein-coding 625954055 LOC116896197 guanylate-binding protein 4-like 3 18265318 18283054 - 22301074;30032202 116896197 MODEL JAAIVD010000012;XM_032897244 XP_032753135 protein-coding 625954069 Myl3 myosin light chain 3 ENCODES a protein that exhibits actin monomer binding (ortholog); cytoskeletal motor activity (ortholog); INVOLVED IN cardiac muscle contraction (ortholog); regulation of striated muscle contraction (ortholog); regulation of the force of heart contraction (ortholog); PARTICIPATES IN prostaglandin I2 signaling pathway; ASSOCIATED WITH cardiac amyloidosis (ortholog); cardiomyopathy (ortholog); Familial Amyloid Polyneuropathies (ortholog); FOUND IN A band (ortholog); I band (ortholog); myosin complex (ortholog) 8 101344808 101350804 + 22301074;30032202 116907683 MODEL JAAIVD010000027;XM_032910789 XP_032766680 protein-coding 625954080 Cd200r1l CD200 receptor 1 like ENCODES a protein that exhibits signaling receptor activity (ortholog); FOUND IN external side of plasma membrane (ortholog) 4 29715214 29739620 + 30032202 116898302 MODEL JAAIVD010000003;XM_032899648 XP_032755539 cell surface glycoprotein CD200 receptor 2 protein-coding 625954088 Lancl2 LanC like glutathione S-transferase 2 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); phosphatidylinositol-5-phosphate binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of abscisic acid-activated signaling pathway (ortholog); FOUND IN cortical actin cytoskeleton (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 6 83516349 83566663 + 22301074;30032202 116903735 MODEL JAAIVD010000024;XM_032906420 XP_032762311 LanC like 2;lanC-like protein 2 protein-coding 625954101 Scand1 SCAN domain containing 1 INVOLVED IN positive regulation of DNA-templated transcription (ortholog); FOUND IN nucleus (ortholog) 5 135661055 135661917 - 116902202 MODEL JAAIVD010000023;XM_032904580 XP_032760471 SCAN domain-containing protein 1 protein-coding 625954107 LOC116893259 uncharacterized protein C9orf85 homolog 2 136543486 136543756 - 116893259 MODEL JAAIVD010000001 pseudo 625954108 Slc35f3 solute carrier family 35 member F3 ENCODES a protein that exhibits choline transmembrane transporter activity (ortholog); INVOLVED IN choline transport (ortholog); thiamine transport (ortholog) 17 45645350 45910726 + 22301074;30032202 116886144 MODEL JAAIVD010000011;XM_032887497;XM_032887498 XP_032743388;XP_032743389 putative thiamine transporter SLC35F3 protein-coding 625954123 LOC116887487 class I histocompatibility antigen, Non-RT1.A alpha-1 chain-like 18 9191743 9217981 - 30032202 116887487 MODEL JAAIVD010000013;XM_032889111;XM_032889112 XP_032745002;XP_032745003 protein-coding 625954138 Tmed1 transmembrane p24 trafficking protein 1 FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog) 8 17779370 17782341 - 30032202 116907682 MODEL JAAIVD010000027;XM_032910787;XM_032910788 XP_032766678;XP_032766679 transmembrane emp24 domain-containing protein 1 protein-coding 625954152 LOC116886247 carbohydrate sulfotransferase 5 17 31585097 31586952 - 22301074;30032202 116886247 MODEL JAAIVD010000011;XM_032887660 XP_032743551 protein-coding 625954157 LOC116902967 40S ribosomal protein S23-like 6 127749804 127750236 + 116902967 MODEL JAAIVD010000024 pseudo 625954158 Akap12 A-kinase anchoring protein 12 ENCODES a protein that exhibits adenylate cyclase binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cellular response to interleukin-1 (ortholog); cellular response to tumor necrosis factor (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); brain ischemia (ortholog); Breast Neoplasms (ortholog); FOUND IN cytosol (ortholog); neuronal cell body (ortholog); plasma membrane (ortholog) 2 199045721 199135007 + 22301074;30032202 116892889 MODEL JAAIVD010000001;XM_032894797 XP_032750688 A-kinase anchor protein 12 protein-coding 625954166 LOC116891868 eukaryotic translation initiation factor 5-like 2 113499660 113501006 - 116891868 MODEL JAAIVD010000001 pseudo 625954167 Ppp4r4 protein phosphatase 4 regulatory subunit 4 ENCODES a protein that exhibits protein phosphatase inhibitor activity (ortholog); protein serine/threonine phosphatase inhibitor activity (ortholog); INVOLVED IN blastocyst hatching (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); protein serine/threonine phosphatase complex (ortholog) 7 114799749 114887711 + 22301074;30032202 116905374 MODEL JAAIVD010000026;XM_032908312 XP_032764203 serine/threonine-protein phosphatase 4 regulatory subunit 4 protein-coding 625954196 LOC116894069 olfactory receptor 51G1 2 102919250 102920191 - 22301074 116894069 MODEL JAAIVD010000001;XM_032895792 XP_032751683 protein-coding 625954199 LOC116883483 type-1A angiotensin II receptor 14 49371128 49417215 + 22301074;30032202 116883483 MODEL JAAIVD010000009;XM_032884638;XM_032884639 XP_032740529;XP_032740530 protein-coding 625954209 LOC116885014 thymosin beta-10-like 15 63507617 63507800 - 22301074;30032202 116885014 MODEL JAAIVD010000010;XM_032886255 XP_032742146 protein-coding 625954213 LOC116889643 phosphoglycerate kinase-like 22301074;30032202 116889643 MODEL JAAIVD010000038;XM_032890550 XP_032746441 protein-coding 625954214 LOC116898240 60S ribosomal protein L37a 4 152738930 152739306 - 22301074;2546769 116898240 MODEL JAAIVD010000003;X14069;XM_032899591 CAA32232;XP_032755482 protein-coding 625954219 Mlec malectin ENCODES a protein that exhibits enzyme binding (ortholog); protein-folding chaperone binding (ortholog) 16 38669500 38681018 + 30032202 116885194 MODEL JAAIVD010000004;XM_032886413;XM_032886414 XP_032742304;XP_032742305 protein-coding 625954232 LOC116889318 ferritin heavy polypeptide-like 17 X 126458234 126459056 + 22301074;30032202 116889318 MODEL JAAIVD010000014;XM_032890443 XP_032746334 protein-coding 625954237 LOC116902806 protein MMS22-like 1 118988985 118994325 - 116902806 MODEL JAAIVD010000025 pseudo 625954238 LOC116913251 60S ribosomal protein L10-like 12 81590943 81591585 - 116913251 MODEL JAAIVD010000007 pseudo 625954239 LOC116913685 olfactory receptor 11G2-like 12 72698866 72705201 - 22301074 116913685 MODEL JAAIVD010000007;XM_032917976;XM_032917977 XP_032773867;XP_032773868 protein-coding 625954246 Pitpnm2 phosphatidylinositol transfer protein membrane associated 2 ENCODES a protein that exhibits calcium ion binding (ortholog); lipid carrier activity (ortholog); phosphatidylinositol transfer activity (ortholog); INVOLVED IN 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process (ortholog); positive regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process (ortholog); positive regulation of phospholipid transport (ortholog); FOUND IN cell body (ortholog); cytoplasmic side of plasma membrane (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog) 16 29615061 29746605 + 22301074;30032202 116885515 MODEL JAAIVD010000004;XM_032886806;XM_032886807;XM_032886808;XM_032886809;XM_032886810;XM_032886811 XP_032742697;XP_032742698;XP_032742699;XP_032742700;XP_032742701;XP_032742702 membrane-associated phosphatidylinositol transfer protein 2 protein-coding 625954292 LOC116883566 histone H2A type 1-B 14 41976889 41977871 - 22301074;30032202 116883566 MODEL JAAIVD010000009;XM_032884747 XP_032740638 protein-coding 625954297 Fsd2 fibronectin type III and SPRY domain containing 2 ASSOCIATED WITH colorectal cancer (ortholog) 2 118692147 118724675 + 22301074 116894266 MODEL JAAIVD010000001;XM_032895972;XM_032895973;XM_032895975 XP_032751863;XP_032751864;XP_032751866 fibronectin type III and SPRY domain-containing protein 2 protein-coding 625954321 Adgrg4 adhesion G protein-coupled receptor G4 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog) X 117307223 117400644 + 22301074;30032202 116888830 MODEL JAAIVD010000014;XM_032890105 XP_032745996 adhesion G-protein coupled receptor G4 protein-coding 625954346 Ppp6r3 protein phosphatase 6 regulatory subunit 3 ENCODES a protein that exhibits protein phosphatase regulator activity (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 2 4095924 4208392 + 22301074;30032202 116890808 MODEL JAAIVD010000001;XM_032891293;XM_032891294;XM_032891295;XM_032891296;XM_032891297;XM_032891298;XM_032891299;XM_032891300;XM_032891301;XM_032891302;XM_032891303;XM_032891304;XM_032891305 XP_032747184;XP_032747185;XP_032747186;XP_032747187;XP_032747188;XP_032747189;XP_032747190;XP_032747191;XP_032747192;XP_032747193;XP_032747194;XP_032747195;XP_032747196 serine/threonine-protein phosphatase 6 regulatory subunit 3 protein-coding 625954403 Ccdc18 coiled-coil domain containing 18 INVOLVED IN positive regulation of adipose tissue development (ortholog); FOUND IN centriolar satellite (ortholog) 11 17941767 18037967 + 116912455 MODEL JAAIVD010000006;XM_032916522 XP_032772413 coiled-coil domain-containing protein 18 protein-coding 625954435 LOC116890287 calcipressin-3-like 1 23224899 23225247 + 116890287 MODEL JAAIVD010000025;XM_032890999 XP_032746890 protein-coding 625954439 Nppa natriuretic peptide A ENCODES a protein that exhibits hormone activity (ortholog); hormone receptor binding (ortholog); neuropeptide hormone activity (ortholog); INVOLVED IN cardiac muscle hypertrophy in response to stress (ortholog); cell growth involved in cardiac muscle cell development (ortholog); cellular response to angiotensin (ortholog); PARTICIPATES IN atrial natriuretic peptide signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); adenocarcinoma (ortholog); FOUND IN brush border (ortholog); cytoplasm (ortholog); extracellular region (ortholog) 1 12774438 12775888 - 22301074;30032202 116886192 MODEL JAAIVD010000025;XM_032887567 XP_032743458 natriuretic peptides A protein-coding 625954446 Alg5 ALG5 dolichyl-phosphate beta-glucosyltransferase ENCODES a protein that exhibits dolichyl-phosphate beta-glucosyltransferase activity (ortholog); INVOLVED IN determination of left/right symmetry (ortholog); dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH polycystic kidney disease 7 (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog) 3 99655646 99669201 - 30032202 116896872 MODEL JAAIVD010000012;XM_032898415 XP_032754306 dolichyl-phosphate beta-glucosyltransferase protein-coding 625954460 Ccdc69 coiled-coil domain containing 69 INVOLVED IN spindle midzone assembly (ortholog); FOUND IN spindle midzone (ortholog) 9 37479617 37505734 - 30032202 116909491 MODEL JAAIVD010000002;XM_032913089 XP_032768980 coiled-coil domain-containing protein 69 protein-coding 625954471 Eef2kmt eukaryotic elongation factor 2 lysine methyltransferase ENCODES a protein that exhibits protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN peptidyl-lysine trimethylation (ortholog); FOUND IN cytoplasm (ortholog); protein-containing complex (ortholog) 9 16661566 16671963 + 116909222 MODEL JAAIVD010000002;XM_032912723;XM_032912724 XP_032768614;XP_032768615 protein-lysine N-methyltransferase EEF2KMT protein-coding 625954484 Fam151a family with sequence similarity 151 member A ASSOCIATED WITH colorectal adenocarcinoma (ortholog) 1 48062836 48075446 - 30032202 116899363 MODEL JAAIVD010000025;XM_032901075 XP_032756966 protein FAM151A protein-coding 625954496 LOC116886322 bolA-like protein 2 17 43610700 43611215 - 30032202 116886322 MODEL JAAIVD010000011;XM_032887770 XP_032743661 protein-coding 625954501 Eif3l eukaryotic translation initiation factor 3 subunit L ENCODES a protein that exhibits translation initiation factor activity (ortholog); INVOLVED IN translational initiation (ortholog); viral translational termination-reinitiation (ortholog); PARTICIPATES IN translation initiation pathway; FOUND IN eukaryotic translation initiation factor 3 complex (ortholog); fibrillar center (ortholog); nucleolus (ortholog) 8 105583247 105585114 - 22301074;30032202 116907837 MODEL JAAIVD010000027;XM_032911021;XM_032911023 XP_032766912;XP_032766914 protein-coding 625954509 Ift140 intraflagellar transport 140 ENCODES a protein that exhibits protein carrier activity (ortholog); INVOLVED IN cilium assembly (ortholog); determination of left/right symmetry (ortholog); embryonic brain development (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 1 (ortholog); autosomal dominant polycystic kidney disease (ortholog); FOUND IN axoneme (ortholog); centriole (ortholog); centrosome (ortholog) 9 2292706 2369881 + 22301074;30032202 116910459 MODEL JAAIVD010000002;XM_032914328;XM_032914329 XP_032770219;XP_032770220 intraflagellar transport protein 140 homolog protein-coding 625954545 LOC116910328 peptidyl-prolyl cis-trans isomerase D-like 9 59520047 59522919 + 116910328 MODEL JAAIVD010000002 pseudo 625954546 Sstr1 somatostatin receptor 1 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); somatostatin receptor activity (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); cellular response to leukemia inhibitory factor (ortholog); cerebellum development (ortholog); PARTICIPATES IN somatostatin signaling pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); neuroendocrine tumor (ortholog); pancreatic cancer (ortholog); FOUND IN cytoplasm (ortholog); G protein-coupled receptor heterodimeric complex (ortholog); G protein-coupled receptor homodimeric complex (ortholog) 7 71553298 71557798 + 22301074;30032202 116905075 MODEL JAAIVD010000026;XM_032907782;XM_032907783 XP_032763673;XP_032763674 somatostatin receptor type 1 protein-coding 625954554 Swi5 SWI5 homologous recombination repair protein INVOLVED IN cellular response to ionizing radiation (ortholog); double-strand break repair via homologous recombination (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); Swi5-Sfr1 complex (ortholog) 5 3342609 3351539 + 30032202 116901151 MODEL JAAIVD010000023;XM_032902792 XP_032758683 DNA repair protein SWI5 homolog protein-coding 625954563 Bcl11b BCL11 transcription factor B ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN alpha-beta T cell differentiation (ortholog); axonogenesis (ortholog); central nervous system neuron differentiation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); combined immunodeficiency (ortholog); COVID-19 (ortholog); FOUND IN neuron projection (ortholog); nucleus (ortholog); SWI/SNF complex (ortholog) 7 125574488 125690359 - 30032202 116905445 MODEL JAAIVD010000026;XM_032908394 XP_032764285 B-cell lymphoma/leukemia 11B;BAF chromatin remodeling complex subunit BCL11B protein-coding 625954571 LOC116902633 small nucleolar RNA SNORD11 5 6640881 6640964 - 116902633 MODEL JAAIVD010000023;XR_004388210 snorna 625954574 LOC116901864 histone H3.3A-like 1 99147977 99148975 - 22301074;30032202 116901864 MODEL JAAIVD010000025;XM_032904065 XP_032759956 protein-coding 625954579 Yars2 tyrosyl-tRNA synthetase 2 ENCODES a protein that exhibits L-tyrosine binding (ortholog); protein homodimerization activity (ortholog); tRNA binding (ortholog); INVOLVED IN mitochondrial tyrosyl-tRNA aminoacylation (ortholog); tRNA aminoacylation (ortholog); ASSOCIATED WITH genetic disease (ortholog); mitochondrial metabolism disease (ortholog); myopathy, lactic acidosis, and sideroblastic anemia (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 4 1571956 1577716 + 22301074;30032202 116898615 MODEL JAAIVD010000003;XM_032899825 XP_032755716 tyrosine--tRNA ligase, mitochondrial protein-coding 625954588 LOC116897804 60S ribosomal protein L23-like 4 9858117 9874010 + 116897804 MODEL JAAIVD010000003 pseudo 625954589 LOC116887251 olfactory receptor 2G3-like 18 10597659 10598690 - 22301074 116887251 MODEL JAAIVD010000013;XM_032888818 XP_032744709 protein-coding 625954593 LOC116901968 uncharacterized LOC116901968 5 110289686 110291586 + 116901968 MODEL JAAIVD010000023;XR_004388032 ncrna 625954597 Stx4 syntaxin 4 ENCODES a protein that exhibits small GTPase binding (ortholog); SNAP receptor activity (ortholog); SNARE binding (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); cornified envelope assembly (ortholog); exocytic insertion of neurotransmitter receptor to postsynaptic membrane (ortholog); PARTICIPATES IN E-cadherin signaling pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; ASSOCIATED WITH Autosomal Recessive Nonsyndromic Deafness 123 (ortholog); Prostatic Neoplasms (ortholog); sensorineural hearing loss (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cell surface (ortholog) 2 74056705 74064214 - 22301074;30032202 116891455 MODEL JAAIVD010000001;XM_032892528;XM_032892529;XM_032892530;XM_032892531 XP_032748419;XP_032748420;XP_032748421;XP_032748422 syntaxin-4 protein-coding 625954625 Creb3l3 cAMP responsive element binding protein 3 like 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); response to endoplasmic reticulum stress (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; ASSOCIATED WITH HYPERTRIGLYCERIDEMIA 1 (ortholog); HYPERTRIGLYCERIDEMIA 2 (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog); nucleus (ortholog) 1 153796381 153805231 + 30032202 116889859 MODEL JAAIVD010000025;XM_032890686 XP_032746577 cyclic AMP-responsive element-binding protein 3-like protein 3 protein-coding 625954639 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 8 95716316 95716387 + 116908470 MODEL JAAIVD010000027 trna 625954640 Wnt5b Wnt family member 5B ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN chondrocyte differentiation (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); positive regulation of cell migration (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); leiomyoma (ortholog); Salivary Gland Neoplasms (ortholog); FOUND IN cell surface (ortholog); extracellular matrix (ortholog) 6 27309087 27322754 + 22301074;30032202 116904612 MODEL JAAIVD010000024;XM_032907404 XP_032763295 protein Wnt-5b protein-coding 625954647 Sec23ip SEC23 interacting protein INVOLVED IN acrosome assembly (ortholog); single fertilization (ortholog); spermatid development (ortholog); FOUND IN cis-Golgi network (ortholog); endoplasmic reticulum exit site (ortholog); perinuclear endoplasmic reticulum (ortholog) 2 73162599 73199377 - 22301074;30032202 116891429 MODEL JAAIVD010000001;XM_032892482 XP_032748373 SEC23-interacting protein protein-coding 625954669 LOC116903112 40S ribosomal protein S23-like 6 6487809 6489207 - 116903112 MODEL JAAIVD010000024 pseudo 625954670 LOC116902827 taste receptor type 2 member 120 6 16423784 16424671 + 22301074;30032202 116902827 MODEL JAAIVD010000024;XM_032905158 XP_032761049 protein-coding 625954673 Chl1 cell adhesion molecule L1 like ENCODES a protein that exhibits identical protein binding (ortholog); protease binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); axon guidance (ortholog); axon regeneration (ortholog); ASSOCIATED WITH epilepsy (ortholog); intellectual disability (ortholog); Peripheral Nerve Injuries (ortholog); FOUND IN apical part of cell (ortholog); dendrite (ortholog) 6 43373163 43710511 - 30032202 116903454 MODEL JAAIVD010000024;XM_032906006;XM_032906007;XM_032906008 XP_032761897;XP_032761898;XP_032761899 neural cell adhesion molecule L1-like protein protein-coding 625954705 Syt9 synaptotagmin 9 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN calcium-dependent activation of synaptic vesicle fusion (ortholog); positive regulation of calcium ion-dependent exocytosis (ortholog); regulation of calcium ion-dependent exocytosis (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; insulin secretion pathway; FOUND IN dense core granule (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog); secretory granule (ortholog) 2 105490591 105657294 + 22301074;30032202 116891833 MODEL JAAIVD010000001;XM_032893200;XM_032893201 XP_032749091;XP_032749092 synaptotagmin-9 protein-coding 625954719 LOC116896026 eukaryotic translation initiation factor 1-like 3 183045003 183045400 - 22301074;30032202 116896026 MODEL JAAIVD010000012;XM_032897034 XP_032752925 protein-coding 625954723 LOC116912038 uncharacterized LOC116912038 1 236343933 236557774 - 116912038 MODEL JAAIVD010000025;XR_004389415;XR_004389416;XR_004389417;XR_004389418 ncrna 625954739 LOC116889951 olfactory receptor 6C3-like 1 161609779 161610735 - 22301074;30032202 116889951 MODEL JAAIVD010000025;XM_032890754 XP_032746645 protein-coding 625954743 Eif4e1b eukaryotic translation initiation factor 4E family member 1B 14 73122678 73125828 + 22301074;30032202 116883711 MODEL JAAIVD010000009;XM_032884924 XP_032740815 eukaryotic translation initiation factor 4E type 1B protein-coding 625954753 LOC116893354 keratin-associated protein 19-2-like 2 158642235 158642666 - 116893354 MODEL JAAIVD010000001;XM_032895159 XP_032751050 protein-coding 625954756 LOC116902810 putative vomeronasal receptor-like protein 4 6 83825131 83826030 + 22301074;30032202 116902810 MODEL JAAIVD010000024;XM_032905143 XP_032761034 protein-coding 625954759 LOC116902542 U1 spliceosomal RNA 5 51850012 51850166 - 116902542 MODEL JAAIVD010000023 pseudo 625954760 LOC116898379 mortality factor 4-like protein 2 4 70233870 70250908 + 116898379 MODEL JAAIVD010000003 pseudo 625954761 LOC116887171 olfactory receptor 2A12-like 1 38055812 38056806 + 22301074 116887171 MODEL JAAIVD010000025;XM_032888726 XP_032744617 protein-coding 625954765 Pcyt1b phosphate cytidylyltransferase 1B, choline ENCODES a protein that exhibits choline-phosphate cytidylyltransferase activity (ortholog); identical protein binding (ortholog); INVOLVED IN CDP-choline pathway (ortholog); ovarian follicle development (ortholog); phosphatidylcholine biosynthetic process (ortholog); ASSOCIATED WITH systemic juvenile rheumatoid arthritis (ortholog); FOUND IN endoplasmic reticulum (ortholog) X 51682597 51745562 - 30032202 116888374 MODEL JAAIVD010000014;XM_032889650;XM_032889651 XP_032745541;XP_032745542 choline-phosphate cytidylyltransferase B;phosphate cytidylyltransferase 1, choline, beta protein-coding 625954780 Actl7b actin like 7B FOUND IN cytoplasm (ortholog) 1 94871127 94872660 + 30032202 116888560 MODEL JAAIVD010000025;XM_032889867 XP_032745758 actin-like protein 7B protein-coding 625954785 Cebpe CCAAT enhancer binding protein epsilon ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); granulocyte differentiation (ortholog); macrophage differentiation (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute promyelocytic leukemia (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 12 70289897 70291302 + 30032202 116913381 MODEL JAAIVD010000007;XM_032917556 XP_032773447 CCAAT/enhancer-binding protein epsilon protein-coding 625954789 LOC116914370 uncharacterized LOC116914370 13 78193057 78194814 + 116914370 MODEL JAAIVD010000008 pseudo 625954790 LOC116894235 40S ribosomal protein S19-like 2 112105381 112105836 + 116894235 MODEL JAAIVD010000001 pseudo 625954791 LOC116887969 E3 ubiquitin-protein ligase RLIM-like X 66377626 66391909 - 116887969 MODEL JAAIVD010000014 pseudo 625954792 Slc17a7 solute carrier family 17 member 7 ENCODES a protein that exhibits chloride channel activity (ortholog); extracellularly glutamate-gated chloride channel activity (ortholog); L-glutamate transmembrane transporter activity (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); chloride transport (ortholog); excitatory postsynaptic potential (ortholog); ASSOCIATED WITH learning disability (ortholog); Memory Disorders (ortholog); sciatic neuropathy (ortholog); FOUND IN cerebellar mossy fiber (ortholog); excitatory synapse (ortholog); membrane (ortholog) 2 154365860 154377704 - 22301074;30032202 116892163 MODEL JAAIVD010000001;XM_032893658;XM_032893659 XP_032749549;XP_032749550 vesicular glutamate transporter 1 protein-coding 625954812 LOC116910243 60S ribosomal protein L14-like 9 67479606 67480424 - 116910243 MODEL JAAIVD010000002 pseudo 625954813 Kcnq4 potassium voltage-gated channel subfamily Q member 4 ENCODES a protein that exhibits potassium channel activity (ortholog); voltage-gated potassium channel activity (ortholog); INVOLVED IN inner ear morphogenesis (ortholog); negative regulation of synaptic transmission, dopaminergic (ortholog); potassium ion transport (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 2A (ortholog); genetic disease (ortholog); Hearing Loss (ortholog) 1 36252984 36304156 + 22301074;30032202 116908316 MODEL JAAIVD010000025;XM_032911896 XP_032767787 potassium voltage-gated channel subfamily KQT member 4 protein-coding 625954831 LOC116903037 putative vomeronasal receptor-like protein 4 6 159367708 159368619 - 22301074;30032202 116903037 MODEL JAAIVD010000024;XM_032905340 XP_032761231 protein-coding 625954835 Ereg epiregulin ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); growth factor activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN cell-cell signaling (ortholog); cytokine-mediated signaling pathway (ortholog); epidermal growth factor receptor signaling pathway (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH cholesteatoma (ortholog); erythropoietic protoporphyria (ortholog); Experimental Colitis (ortholog); FOUND IN extracellular region (ortholog) 11 4474473 4488608 + 30032202 116912816 MODEL JAAIVD010000006;XM_032916984 XP_032772875 proepiregulin protein-coding 625954844 LOC116907150 G1/S-specific cyclin-D3-like 8 66825203 66826115 + 116907150 MODEL JAAIVD010000027 pseudo 625954845 LOC116895578 28S ribosomal protein L42, mitochondrial-like 3 137461619 137462029 - 116895578 MODEL JAAIVD010000012 pseudo 625954846 Trnak-cuu transfer RNA lysine (anticodon CUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 219616116 219616188 + 116895133 MODEL JAAIVD010000001 trna 625954847 Dnah10 dynein axonemal heavy chain 10 ASSOCIATED WITH Asthenozoospermia (ortholog); atrial fibrillation (ortholog); genetic disease (ortholog); FOUND IN sperm principal piece (ortholog) 16 29095249 29217171 - 22301074;30032202 116885257 MODEL JAAIVD010000004;XM_032886496 XP_032742387 dynein heavy chain 10, axonemal protein-coding 625954929 Ak3 adenylate kinase 3 ENCODES a protein that exhibits AMP kinase activity (ortholog); identical protein binding (ortholog); nucleoside triphosphate adenylate kinase activity (ortholog); INVOLVED IN ADP biosynthetic process (ortholog); AMP metabolic process (ortholog); AMP phosphorylation (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; de novo purine biosynthetic pathway; dihydropyrimidinase deficiency pathway; ASSOCIATED WITH chronic lymphocytic leukemia (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 2 29085986 29111913 - 22301074;30032202 116891069 MODEL JAAIVD010000001;XM_032891773 XP_032747664 GTP:AMP phosphotransferase AK3, mitochondrial protein-coding 625954938 Usp26 ubiquitin specific peptidase 26 ENCODES a protein that exhibits deubiquitinase activity (ortholog); K48-linked deubiquitinase activity (ortholog); INVOLVED IN negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); regulation of androgen receptor signaling pathway (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH Asthenozoospermia (ortholog); male infertility (ortholog); oligospermia (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); sperm flagellum (ortholog) X 115132756 115176705 - 22301074;30032202 116888258 MODEL JAAIVD010000014;XM_032889540 XP_032745431 ubiquitin carboxyl-terminal hydrolase 26 protein-coding 625954950 LOC116896259 uncharacterized LOC116896259 3 29263516 29269575 + 116896259 MODEL JAAIVD010000012;XR_004387319 ncrna 625954954 LOC116896862 40S ribosomal protein S4, X isoform-like 1 87185541 87186344 + 116896862 MODEL JAAIVD010000025 pseudo 625954955 LOC116915065 39S ribosomal protein L48, mitochondrial-like 13 38383413 38384032 + 116915065 MODEL JAAIVD010000008 pseudo 625954956 LOC116914939 ZW10 interactor-like 13 10034903 10035976 - 116914939 MODEL JAAIVD010000008 pseudo 625954957 LOC116912139 60 kDa heat shock protein, mitochondrial-like 11 26208105 26209983 + 116912139 MODEL JAAIVD010000006 pseudo 625954958 Smad5 SMAD family member 5 ENCODES a protein that exhibits DEAD/H-box RNA helicase binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN anti-Mullerian hormone receptor signaling pathway (ortholog); BMP signaling pathway (ortholog); bone development (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH Cocaine-Related Disorders (ortholog); granulosa cell tumor (ortholog); Testicular Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 14 81340107 81351076 - 22301074;30032202 116883340 MODEL JAAIVD010000009;XM_032884413 XP_032740304 mothers against decapentaplegic homolog 5 protein-coding 625954968 LOC116889434 U6 spliceosomal RNA X 74921438 74921540 - 116889434 MODEL JAAIVD010000014;XR_004386396 snrna 625954971 LOC116910476 uncharacterized LOC116910476 9 49282643 49296239 + 116910476 MODEL JAAIVD010000002;XM_032914351 XP_032770242 uncharacterized protein LOC116910476 protein-coding 625954977 Rbm20 RNA binding motif protein 20 ENCODES a protein that exhibits pre-mRNA intronic binding (ortholog); RNA binding (ortholog); splicing factor binding (ortholog); INVOLVED IN heart formation (ortholog); negative regulation of mRNA splicing, via spliceosome (ortholog); positive regulation of RNA splicing (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); atrial fibrillation (ortholog); cardiac arrest (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); nucleus (ortholog) 2 53114327 53307255 + 22301074;30032202 116893821 MODEL JAAIVD010000001;XM_032895534 XP_032751425 RNA-binding protein 20 protein-coding 625954994 LOC116894353 glandular kallikrein-3, submandibular-like 2 155342525 155346313 - 116894353 MODEL JAAIVD010000001 pseudo 625954995 Kndc1 kinase non-catalytic C-lobe domain containing 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN cerebellar granule cell differentiation (ortholog); positive regulation of protein phosphorylation (ortholog); regulation of dendrite development (ortholog); ASSOCIATED WITH breast ductal carcinoma (ortholog); invasive ductal carcinoma (ortholog); FOUND IN dendrite (ortholog); guanyl-nucleotide exchange factor complex (ortholog); neuronal cell body (ortholog) 2 61913466 61962327 - 22301074;30032202 116891357 MODEL JAAIVD010000001;XM_032892353 XP_032748244 kinase non-catalytic C-lobe domain-containing protein 1 protein-coding 625955029 LOC116894193 olfactory receptor 481 2 106110505 106111446 + 22301074;30032202 116894193 MODEL JAAIVD010000001;XM_032895907 XP_032751798 protein-coding 625955033 Kcnq3 potassium voltage-gated channel subfamily Q member 3 ENCODES a protein that exhibits calmodulin binding (ortholog); potassium channel activity (ortholog); protein kinase binding (ortholog); INVOLVED IN action potential initiation (ortholog); apoptosome assembly (ortholog); cellular response to ammonium ion (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); benign epilepsy with centrotemporal spikes (ortholog); FOUND IN axon initial segment (ortholog); cell surface (ortholog); dendrite (ortholog) 1 240136667 240429889 - 22301074;30032202 116912196 MODEL JAAIVD010000025;XM_032916133;XM_032916142 XP_032772024;XP_032772033 potassium voltage-gated channel subfamily KQT member 3 protein-coding 625955056 LOC116893129 glyceraldehyde-3-phosphate dehydrogenase-like 2 79054231 79055266 - 116893129 MODEL JAAIVD010000001 pseudo 625955057 LOC116911685 COP9 signalosome complex subunit 2-like 10 81955079 81957019 + 22301074;30032202 116911685 MODEL JAAIVD010000005;XM_032915640 XP_032771531 protein-coding 625955062 LOC116904709 small nucleolar RNA SNORA17 6 62403148 62403276 + 116904709 MODEL JAAIVD010000024;XR_004388404 snorna 625955065 LOC116883839 zinc finger protein 431-like 14 76890956 76906138 - 30032202 116883839 MODEL JAAIVD010000009;XM_032885102 XP_032740993 protein-coding 625955073 LOC116896599 protein argonaute-4 1 31773900 31808502 + 22301074 116896599 MODEL JAAIVD010000025;XM_032897851;XM_032897858 XP_032753742;XP_032753749 protein-coding 625955097 LOC116902893 transcription elongation factor SPT4-A-like 6 104246038 104246395 - 116902893 MODEL JAAIVD010000024 pseudo 625955098 Dcdc2 doublecortin domain containing 2 ENCODES a protein that exhibits kinesin binding (ortholog); INVOLVED IN cilium assembly (ortholog); neuron migration (ortholog); positive regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autosomal recessive nonsyndromic deafness 66 (ortholog); chylomicron retention disease (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); cytoplasm (ortholog) 14 44083809 44242558 + 22301074;30032202 116883761 MODEL JAAIVD010000009;XM_032885007 XP_032740898 doublecortin domain-containing protein 2 protein-coding 625955112 Ext2 exostosin glycosyltransferase 2 ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity (ortholog); glucuronosyltransferase activity (ortholog); INVOLVED IN cell differentiation (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); endochondral bone morphogenesis (ortholog); ASSOCIATED WITH genetic disease (ortholog); hepatoblastoma (ortholog); hereditary multiple exostoses (ortholog); FOUND IN catalytic complex (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) 5 67867743 68002009 - 22301074;30032202 116901654 MODEL JAAIVD010000023;XM_032903764 XP_032759655 exostosin-2 protein-coding 625955130 Sass6 SAS-6 centriolar assembly protein INVOLVED IN centriole replication (ortholog); centrosome duplication (ortholog); positive regulation of centriole replication (ortholog); ASSOCIATED WITH genetic disease (ortholog); primary autosomal recessive microcephaly 14 (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); cytoplasm (ortholog) 3 43094222 43125926 - 30032202 116896326 MODEL JAAIVD010000012;XM_032897420;XM_032897421 XP_032753311;XP_032753312 spindle assembly abnormal protein 6 homolog protein-coding 625955155 LOC116900440 olfactory receptor 4C15-like 5 70813269 70814204 - 22301074 116900440 MODEL JAAIVD010000023;XM_032902181 XP_032758072 protein-coding 625955158 Spag16 sperm associated antigen 16 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN axoneme assembly (ortholog); cell motility in response to calcium ion (ortholog); cerebrospinal fluid circulation (ortholog); ASSOCIATED WITH fetal akinesia deformation sequence syndrome 1 (ortholog); FOUND IN axonemal central apparatus (ortholog); axoneme (ortholog); cytoplasm (ortholog) 4 143567906 144091516 + 22301074;30032202 116898535 MODEL JAAIVD010000003;XM_032899754 XP_032755645 sperm-associated antigen 16 protein protein-coding 625955180 LOC116904539 S-formylglutathione hydrolase-like 6 15558505 15561298 - 116904539 MODEL JAAIVD010000024 pseudo 625955181 Mvb12a multivesicular body subunit 12A ENCODES a protein that exhibits lipid binding (ortholog); ubiquitin binding (ortholog); INVOLVED IN regulation of epidermal growth factor receptor signaling pathway (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); ESCRT I complex (ortholog) 13 13417088 13421770 - 22301074;30032202 116914731 MODEL JAAIVD010000008;XM_032919164;XM_032919165 XP_032775055;XP_032775056 protein-coding 625955199 LOC116913340 protein SET-like 12 54799620 54826778 - 116913340 MODEL JAAIVD010000007 pseudo 625955200 Foxd2 forkhead box D2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog) 1 41673150 41676006 + 30032202 116898819 MODEL JAAIVD010000025;XM_032900175 XP_032756066 forkhead box protein D2 protein-coding 625955205 Creb3l2 cAMP responsive element binding protein 3 like 2 ENCODES a protein that exhibits cAMP response element binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cartilage development (ortholog); chondrocyte differentiation (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; FOUND IN chromatin (ortholog); endoplasmic reticulum (ortholog); nucleoplasm (ortholog) 6 102440689 102553370 + 30032202 116903959 MODEL JAAIVD010000024;XM_032906747 XP_032762638 cyclic AMP-responsive element-binding protein 3-like protein 2 protein-coding 625955221 Whamm WASP homolog associated with actin, golgi membranes and microtubules ENCODES a protein that exhibits Arp2/3 complex binding (ortholog); microtubule binding (ortholog); small GTPase binding (ortholog); INVOLVED IN actin filament organization (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); focal adhesion assembly (ortholog); ASSOCIATED WITH Fanconi syndrome (ortholog); primary ovarian insufficiency (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum-Golgi intermediate compartment membrane (ortholog); Golgi membrane (ortholog) 2 118662875 118688189 - 22301074;30032202 116891901 MODEL JAAIVD010000001;XM_032893318 XP_032749209 WASP homolog-associated protein with actin, membranes and microtubules protein-coding 625955235 Phlda1 pleckstrin homology like domain family A member 1 INVOLVED IN forebrain neuron differentiation (ortholog); glycoprotein biosynthetic process (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); atrial fibrillation (ortholog); cognitive disorder (ortholog); FOUND IN nucleolus (ortholog) 1 189686465 189688716 + 30032202 116908914 MODEL JAAIVD010000025;XM_032912373 XP_032768264 pleckstrin homology-like domain family A member 1 protein-coding 625955241 Rspo4 R-spondin 4 INVOLVED IN nail development (ortholog); positive regulation of Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH genetic disease (ortholog); nonsyndromic congenital nail disorder 4 (ortholog) 5 131213311 131246022 + 116901041 MODEL JAAIVD010000023;XM_032902622 XP_032758513 R-spondin-4 protein-coding 625955250 LOC116906259 Ig heavy chain V-III region T957-like 7 122622752 122623233 - 116906259 MODEL JAAIVD010000026 pseudo 625955251 LOC116894253 vomeronasal type-2 receptor 116-like 2 115133878 115173675 - 22301074;30032202 116894253 MODEL JAAIVD010000001;XM_032895959 XP_032751850 protein-coding 625955259 Lypd2 LY6/PLAUR domain containing 2 1 247475028 247477057 - 30032202 116890132 MODEL JAAIVD010000025;XM_032890869 XP_032746760 ly6/PLAUR domain-containing protein 2 protein-coding 625955266 LOC116898577 ubiquitin-40S ribosomal protein S27a-like 4 163830160 163830644 - 116898577 MODEL JAAIVD010000003 pseudo 625955267 Tns1 tensin 1 INVOLVED IN cell-substrate junction assembly (ortholog); fibroblast migration (ortholog); ASSOCIATED WITH chronic obstructive pulmonary disease (ortholog); FOUND IN cell-substrate junction (ortholog); focal adhesion (ortholog) 4 147367235 147576236 - 22301074;30032202 116899493 MODEL JAAIVD010000003;XM_032901325 XP_032757216 tensin-1 protein-coding 625955303 LOC116895182 ATP synthase subunit g, mitochondrial-like 3 169749933 169750486 + 116895182 MODEL JAAIVD010000012 pseudo 625955304 Ruvbl1 RuvB like AAA ATPase 1 ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); ADP binding (ortholog); ATP binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); gene expression (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; FOUND IN ciliary basal body (ortholog); cytosol (ortholog); Ino80 complex (ortholog) 6 57822841 57857284 - 22301074;30032202 116903524 MODEL JAAIVD010000024;XM_032906134 XP_032762025 ruvB-like 1 protein-coding 625955319 LOC116902745 N-acetyltransferase family 8 member 3-like 6 60491623 60492638 + 30032202 116902745 MODEL JAAIVD010000024;XM_032905093 XP_032760984 protein-coding 625955324 Sox1 SRY-box transcription factor 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); forebrain development (ortholog); forebrain neuron development (ortholog); FOUND IN nucleus (ortholog) 13 71303331 71304503 - 116914361 MODEL JAAIVD010000008;XM_032918571 XP_032774462 transcription factor SOX-1 protein-coding 625955328 Apoc2 apolipoprotein C2 ENCODES a protein that exhibits identical protein binding (ortholog); lipase inhibitor activity (ortholog); lipid binding (ortholog); INVOLVED IN cholesterol efflux (ortholog); chylomicron remnant clearance (ortholog); chylomicron remodeling (ortholog); PARTICIPATES IN altered lipoprotein metabolic pathway; lipoprotein metabolic pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); Coronary Disease (ortholog); diabetes mellitus (ortholog); FOUND IN chylomicron (ortholog); extracellular region (ortholog); intermediate-density lipoprotein particle (ortholog) 2 170940090 170945166 + 22301074;30032202 116892517 MODEL JAAIVD010000001;XM_032894273 XP_032750164 apolipoprotein C-II protein-coding 625955336 Tbccd1 TBCC domain containing 1 INVOLVED IN maintenance of centrosome location (ortholog); maintenance of Golgi location (ortholog); regulation of cell migration (ortholog); FOUND IN spindle pole centrosome (ortholog) 4 7497496 7533176 - 30032202 116898721 MODEL JAAIVD010000003;XM_032900016;XM_032900017;XM_032900018 XP_032755907;XP_032755908;XP_032755909 TBCC domain-containing protein 1 protein-coding 625955356 LOC116914942 ral guanine nucleotide dissociation stimulator-like 13 11523901 11525666 - 116914942 MODEL JAAIVD010000008 pseudo 625955357 LOC116902770 polypyrimidine tract-binding protein 1-like 6 72946375 72948156 - 22301074;30032202 116902770 MODEL JAAIVD010000024;XM_032905112 XP_032761003 protein-coding 625955361 Samd15 sterile alpha motif domain containing 15 7 101294726 101308587 + 22301074 116905319 MODEL JAAIVD010000026;XM_032908210 XP_032764101 sterile alpha motif domain-containing protein 15 protein-coding 625955368 LOC116907511 ATP synthase subunit g, mitochondrial-like 1 157290410 157292841 + 116907511 MODEL JAAIVD010000025 pseudo 625955369 LOC116908219 5'-nucleotidase domain-containing protein 2-like 8 74256275 74299790 + 116908219 MODEL JAAIVD010000027 pseudo 625955370 LOC116914162 U4 spliceosomal RNA 12 77797939 77798063 - 116914162 MODEL JAAIVD010000007 pseudo 625955371 LOC116906723 60S ribosomal protein L29-like 8 30623252 30623719 + 116906723 MODEL JAAIVD010000027 pseudo 625955372 LOC116902854 olfactory receptor 2A2-like 6 97492563 97493492 - 22301074 116902854 MODEL JAAIVD010000024;XM_032905182 XP_032761073 protein-coding 625955375 Mcf2l MCF.2 cell line derived transforming sequence like ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN intracellular signal transduction (ortholog); positive regulation of Rho protein signal transduction (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasm (ortholog); endomembrane system (ortholog); extrinsic component of cytoplasmic side of plasma membrane (ortholog) 13 70669136 70817171 - 22301074;30032202 116914880 MODEL JAAIVD010000008;XM_032919323 XP_032775214 guanine nucleotide exchange factor DBS protein-coding 625955412 LOC116899853 small nucleolar RNA SNORA17 4 115880723 115880850 + 116899853 MODEL JAAIVD010000003;XR_004387849 snorna 625955415 Mfap2 microfibril associated protein 2 ENCODES a protein that exhibits fibrinogen binding (ortholog); fibronectin binding (ortholog); INVOLVED IN embryonic eye morphogenesis (ortholog); platelet formation (ortholog); positive regulation of cold-induced thermogenesis (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH ovarian cyst (ortholog); FOUND IN microfibril (ortholog) 1 17131308 17137064 - 22301074;30032202 116893503 MODEL JAAIVD010000025;XM_032895243 XP_032751134 microfibrillar-associated protein 2 protein-coding 625955428 LOC116890350 U6 spliceosomal RNA 1 154406969 154407073 - 116890350 MODEL JAAIVD010000025;XR_004386570 snrna 625955431 Prxl2b peroxiredoxin like 2B ENCODES a protein that exhibits oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (ortholog); prostaglandin F synthase activity (ortholog); prostaglandin H2 endoperoxidase reductase activity (ortholog); INVOLVED IN cyclooxygenase pathway (ortholog); prostaglandin biosynthetic process (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH pneumoconiosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 1 5816157 5818846 + 116892094 MODEL JAAIVD010000025;XM_032893573 XP_032749464 prostamide/prostaglandin F synthase protein-coding 625955442 Ylpm1 YLP motif containing 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of telomere maintenance (ortholog); ASSOCIATED WITH myoepithelioma (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) 7 99104042 99181796 + 30032202 116905285 MODEL JAAIVD010000026;XM_032908146 XP_032764037 YLP motif-containing protein 1 protein-coding 625955467 Zfp37 ZFP37 zinc finger protein INVOLVED IN cell differentiation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 1 91345857 91437058 + 22301074;30032202 116901449 MODEL JAAIVD010000025;XM_032903388 XP_032759279 zinc finger protein 37 homolog protein-coding 625955475 Mbtps1 membrane bound transcription factor peptidase, site 1 ENCODES a protein that exhibits endopeptidase activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN lipid metabolic process (ortholog); lysosome organization (ortholog); membrane protein intracellular domain proteolysis (ortholog); PARTICIPATES IN sterol regulatory element-binding protein signaling pathway; ASSOCIATED WITH Craniofacial Abnormalities (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN Golgi membrane (ortholog); Golgi stack (ortholog); mitochondrion (ortholog) 17 39154366 39203560 - 22301074;30032202 116886053 MODEL JAAIVD010000011;XM_032887358 XP_032743249 membrane-bound transcription factor site-1 protease protein-coding 625955502 Fubp1 far upstream element binding protein 1 ENCODES a protein that exhibits RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); hematopoietic stem cell proliferation (ortholog); positive regulation of gene expression (ortholog); ASSOCIATED WITH breast cancer (ortholog); breast ductal carcinoma (ortholog); colorectal carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); synapse (ortholog) 3 9376649 9402290 - 22301074;30032202 116896156 MODEL JAAIVD010000012;XM_032897142;XM_032897143;XM_032897144;XM_032897145;XM_032897146;XM_032897147 XP_032753033;XP_032753034;XP_032753035;XP_032753036;XP_032753037;XP_032753038 far upstream element-binding protein 1 protein-coding 625955540 Abhd10 abhydrolase domain containing 10, depalmitoylase ENCODES a protein that exhibits hydrolase activity, hydrolyzing O-glycosyl compounds (ortholog); palmitoyl-(protein) hydrolase activity (ortholog); INVOLVED IN protein depalmitoylation (ortholog); xenobiotic metabolic process (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) 4 30452196 30466047 - 30032202 116898881 MODEL JAAIVD010000003;XM_032900253;XM_032900254 XP_032756144;XP_032756145 mycophenolic acid acyl-glucuronide esterase, mitochondrial protein-coding 625955554 Tubd1 tubulin delta 1 INVOLVED IN cytoskeleton organization (ortholog); microtubule cytoskeleton organization (ortholog); positive regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH polydactyly (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nucleus (ortholog) 9 84206875 84229348 - 22301074;30032202 116910097 MODEL JAAIVD010000002;XM_032913920 XP_032769811 tubulin delta chain protein-coding 625955568 Nfe2l1 NFE2 like bZIP transcription factor 1 ENCODES a protein that exhibits cholesterol binding (ortholog); chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular homeostasis (ortholog); cellular response to cholesterol (ortholog); cellular response to cold (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); hepatocellular carcinoma (ortholog); Myocardial Reperfusion Injury (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); nucleus (ortholog) 9 57556133 57568974 + 30032202 116908660 MODEL JAAIVD010000002;XM_032911936;XM_032911937;XM_032911938 XP_032767827;XP_032767828;XP_032767829 endoplasmic reticulum membrane sensor NFE2L1;nuclear factor, erythroid 2 like 1 protein-coding 625955583 LOC116909478 TBC1 domain family member 30-like 1 199248688 199254132 - 116909478 MODEL JAAIVD010000025;XM_032913075;XM_032913083 XP_032768966;XP_032768974 protein-coding 625955593 Vars2 valyl-tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits valine-tRNA ligase activity (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 1 (ortholog); combined oxidative phosphorylation deficiency 20 (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) 18 8875276 8885777 - 22301074;30032202 116887462 MODEL JAAIVD010000013;XM_032889069;XM_032889071 XP_032744960;XP_032744962 valine--tRNA ligase, mitochondrial protein-coding 625955631 Ilrun inflammation and lipid regulator with UBA-like and NBR1-like domains INVOLVED IN negative regulation of defense response to virus (ortholog); negative regulation of protein localization to nucleus (ortholog); negative regulation of tumor necrosis factor production (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) 18 6035137 6102632 + 30032202 116886866 MODEL JAAIVD010000013;XM_032888322;XM_032888323 XP_032744213;XP_032744214 protein ILRUN protein-coding 625955642 Pkhd1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin INVOLVED IN branching morphogenesis of an epithelial tube (ortholog); cell-cell junction organization (ortholog); cilium assembly (ortholog); ASSOCIATED WITH autosomal dominant polycystic kidney disease (ortholog); autosomal recessive polycystic kidney disease (ortholog); Caroli disease (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); apical plasma membrane (ortholog); centrosome (ortholog) 4 97482048 97939566 - 116898102 MODEL JAAIVD010000003;XM_032899487 XP_032755378 fibrocystin protein-coding 625955710 Clpb ClpB family mitochondrial disaggregase ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent protein disaggregase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to heat (ortholog); granulocyte differentiation (ortholog); ASSOCIATED WITH 3-methylglutaconic aciduria type 7a (ortholog); 3-methylglutaconic aciduria type 7b (ortholog); 3-methylglutaconic aciduria with cataracts, neurologic involvement and neutropenia (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) 2 99964845 100097407 + 22301074;30032202 116891765 MODEL JAAIVD010000001;XM_032893088;XM_032893089 XP_032748979;XP_032748980 caseinolytic mitochondrial matrix peptidase chaperone subunit B;caseinolytic peptidase B protein homolog protein-coding 625955734 Nkapl NFKB activating protein like ASSOCIATED WITH schizophrenia (ortholog) 14 40983650 40985197 + 22301074;30032202 116883642 MODEL JAAIVD010000009;XM_032884831 XP_032740722 NKAP-like protein protein-coding 625955739 Lrriq3 leucine rich repeats and IQ motif containing 3 3 6263123 6356258 - 22301074 116896135 MODEL JAAIVD010000012;XM_032897117 XP_032753008 leucine-rich repeat and IQ domain-containing protein 3 protein-coding 625955751 LOC116908009 heterogeneous nuclear ribonucleoprotein A3-like 8 114067959 114069165 + 116908009 MODEL JAAIVD010000027 pseudo 625955752 Lsm10 LSM10, U7 small nuclear RNA associated ENCODES a protein that exhibits histone pre-mRNA DCP binding (ortholog); U7 snRNA binding (ortholog); INVOLVED IN positive regulation of G1/S transition of mitotic cell cycle (ortholog); ASSOCIATED WITH Fraser syndrome 3 (ortholog); FOUND IN Cajal body (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 1 32193771 32195920 - 30032202 116896718 MODEL JAAIVD010000025;XM_032898139;XM_032898148;XM_032898154;XM_032898162 XP_032754030;XP_032754039;XP_032754045;XP_032754053 U7 snRNA-associated Sm-like protein LSm10 protein-coding 625955769 Clul1 clusterin like 1 ASSOCIATED WITH Breast Neoplasms (ortholog) 4 182387005 182411893 + 116899728 MODEL JAAIVD010000003;XM_032901768 XP_032757659 clusterin-like protein 1 protein-coding 625955781 Zbtb25 zinc finger and BTB domain containing 25 FOUND IN nucleoplasm (ortholog) 7 90508463 90533394 - 22301074;30032202 116905179 MODEL JAAIVD010000026;XM_032907959;XM_032907960;XM_032907961;XM_032907962 XP_032763850;XP_032763851;XP_032763852;XP_032763853 zinc finger and BTB domain-containing protein 25 protein-coding 625955799 C3H3orf80 chromosome 3 C3orf80 homolog 3 86423713 86425408 - 116896798 MODEL JAAIVD010000012;XM_032898269 XP_032754160 uncharacterized membrane protein C3orf80 homolog protein-coding 625955804 Cib2 calcium and integrin binding family member 2 ENCODES a protein that exhibits calcium ion binding (ortholog); integrin binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); cellular response to ATP (ortholog); photoreceptor cell maintenance (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 48 (ortholog); fundus dystrophy (ortholog); FOUND IN cuticular plate (ortholog); cytoplasm (ortholog); muscle tendon junction (ortholog) 8 48611010 48627784 - 22301074 116907309 MODEL JAAIVD010000027;XM_032910256;XM_032910257 XP_032766147;XP_032766148 calcium and integrin-binding family member 2 protein-coding 625955817 LOC116889043 uncharacterized LOC116889043 X 89092516 89095651 - 116889043 MODEL JAAIVD010000014;XR_004386362 ncrna 625955822 Trnar-ucg transfer RNA arginine (anticodon UCG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42548882 42548954 - 116884194 MODEL JAAIVD010000009 trna 625955823 LOC116900313 olfactory receptor 141-like 5 64147173 64149305 - 22301074;30032202 116900313 MODEL JAAIVD010000023;XM_032902069 XP_032757960 protein-coding 625955828 Lhcgr luteinizing hormone/choriogonadotropin receptor ENCODES a protein that exhibits ATPase binding (ortholog); choriogonadotropin hormone binding (ortholog); choriogonadotropin hormone receptor activity (ortholog); INVOLVED IN activation of adenylate cyclase activity (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphas family; luteinizing hormone signaling pathway; peptide and protein hormone signaling pathway; ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); breast cancer (ortholog); disorder of sexual development (ortholog); FOUND IN endosome (ortholog); extracellular region (ortholog); plasma membrane (ortholog) 7 4077790 4137727 + 22301074;30032202 116905621 MODEL JAAIVD010000026;XM_032908606 XP_032764497 lutropin-choriogonadotropic hormone receptor protein-coding 625955843 Trnaa-agc transfer RNA alanine (anticodon AGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 100347640 100347708 + 116904845 MODEL JAAIVD010000024 trna 625955844 LOC116886665 homeobox protein Rhox5-like 17 7616806 7617408 + 116886665 MODEL JAAIVD010000011 pseudo 625955845 LOC116887712 putative uncharacterized protein ZNRD1-AS1 18 9936487 9945672 + 116887712 MODEL JAAIVD010000013;XM_032889310;XM_032889311;XR_004386235;XR_004386236 XP_032745201;XP_032745202 protein-coding 625955862 Trnat-ugu transfer RNA threonine (anticodon UGU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41461372 41461445 + 116884200 MODEL JAAIVD010000009 trna 625955863 LOC116900193 uncharacterized LOC116900193 5 48735819 48746439 - 116900193 MODEL JAAIVD010000023;XR_004387923 ncrna 625955868 Cdh1 cadherin 1 ENCODES a protein that exhibits alpha-catenin binding (ortholog); ankyrin binding (ortholog); beta-catenin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); adherens junction organization (ortholog); bicellular tight junction assembly (ortholog); PARTICIPATES IN E-cadherin signaling pathway; fibroblast growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN actin cytoskeleton (ortholog); adherens junction (ortholog); apical junction complex (ortholog) 17 26323024 26391331 + 22301074;30032202 116886109 MODEL JAAIVD010000011;XM_032887441 XP_032743332 cadherin-1 protein-coding 625955888 Fmr1nb FMR1 neighbor X 126692320 126713518 - 116889349 MODEL JAAIVD010000014;XM_032890460 XP_032746351 fragile X mental retardation 1 neighbor protein protein-coding 625955899 LOC116889202 60S ribosomal protein L13-like X 32612598 32613217 + 116889202 MODEL JAAIVD010000014 pseudo 625955900 Cdk5rap1 CDK5RAP1 mitochondrial tRNA methylthiotransferase ENCODES a protein that exhibits protein-containing complex binding (ortholog); tRNA-2-methylthio-N(6)-dimethylallyladenosine(37) synthase activity (ortholog); INVOLVED IN mitochondrial tRNA modification (ortholog); negative regulation of cyclin-dependent protein serine/threonine kinase activity (ortholog); positive regulation of cyclin-dependent protein serine/threonine kinase activity (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 5 133701238 133736256 - 22301074;30032202 116902156 MODEL JAAIVD010000023;XM_032904490;XM_032904491;XR_004388045;XR_004388046 XP_032760381;XP_032760382 CDK5 regulatory subunit associated protein 1;CDK5 regulatory subunit-associated protein 1 protein-coding 625955927 Nr2e1 nuclear receptor subfamily 2 group E member 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); enzyme binding (ortholog); INVOLVED IN aggressive behavior (ortholog); amygdala development (ortholog); anterior commissure morphogenesis (ortholog); FOUND IN nucleus (ortholog) 18 42279665 42300667 - 22301074;30032202 116887499 MODEL JAAIVD010000013;XM_032889118 XP_032745009 protein-coding 625955940 Primpol primase and DNA directed polymerase ENCODES a protein that exhibits chromatin binding (ortholog); DNA-directed DNA polymerase activity (ortholog); DNA-directed RNA polymerase activity (ortholog); INVOLVED IN error-prone translesion synthesis (ortholog); mitochondrial DNA repair (ortholog); mitochondrial DNA replication (ortholog); ASSOCIATED WITH Myopia 22, Autosomal Dominant (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 13 41309930 41344265 + 22301074;30032202 116914725 MODEL JAAIVD010000008;XM_032919155 XP_032775046 DNA-directed primase/polymerase protein protein-coding 625955958 LOC116903338 uncharacterized LOC116903338 6 26879547 26887539 - 116903338 MODEL JAAIVD010000024;XR_004388271 ncrna 625955963 LOC116912978 small nucleolar RNA SNORA17 11 3251330 3251461 + 116912978 MODEL JAAIVD010000006;XR_004389543 snorna 625955966 Fbp1 fructose-bisphosphatase 1 ENCODES a protein that exhibits AMP binding (ortholog); fructose 1,6-bisphosphate 1-phosphatase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular hyperosmotic salinity response (ortholog); cellular hypotonic salinity response (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructose-1,6-bisphosphatase deficiency pathway; fructosuria pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); Colonic Neoplasms (ortholog); fructose-1,6-bisphosphatase deficiency (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); nucleus (ortholog) 14 76615759 76636807 + 22301074;30032202 116883863 MODEL JAAIVD010000009;XM_032885130 XP_032741021 fructose-1,6-bisphosphatase 1 protein-coding 625955977 Tead4 TEA domain transcription factor 4 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN blastocyst formation (ortholog); cell fate commitment (ortholog); cell fate specification (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 6 19402790 19507661 + 22301074;30032202 116903225 MODEL JAAIVD010000024;XM_032905599 XP_032761490 transcriptional enhancer factor TEF-3 protein-coding 625955992 Evx2 even-skipped homeobox 2 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN limb morphogenesis (ortholog); ASSOCIATED WITH Synpolydactyly 1 (ortholog) 5 51997215 52000902 - 22301074;30032202 116900206 MODEL JAAIVD010000023;XM_032901960 XP_032757851 homeobox even-skipped homolog protein 2 protein-coding 625955997 LOC116889444 U6 snRNA-associated Sm-like protein LSm6 1 237773789 237774614 + 116889444 MODEL JAAIVD010000025 pseudo 625955998 LOC116904133 uncharacterized LOC116904133 6 137908309 137910151 + 116904133 MODEL JAAIVD010000024;XR_004388331 ncrna 625956002 Rpp30 ribonuclease P/MRP subunit p30 ENCODES a protein that exhibits ribonuclease P activity (ortholog); ribonuclease P RNA binding (ortholog); INVOLVED IN tRNA 5'-leader removal (ortholog); PARTICIPATES IN tRNA maturation pathway; FOUND IN multimeric ribonuclease P complex (ortholog); ribonuclease MRP complex (ortholog) 2 37729238 37750803 - 22301074;30032202 116891141 MODEL JAAIVD010000001;XM_032891884 XP_032747775 ribonuclease P protein subunit p30 protein-coding 625956017 Ucn2 urocortin 2 ENCODES a protein that exhibits corticotropin-releasing hormone receptor 2 binding (ortholog); G protein-coupled receptor binding (ortholog); neuropeptide hormone activity (ortholog); INVOLVED IN cellular response to glucocorticoid stimulus (ortholog); cellular response to hypoxia (ortholog); negative regulation of follicle-stimulating hormone secretion (ortholog); PARTICIPATES IN corticotropin-releasing hormone signaling pathway; ASSOCIATED WITH Anorexia (ortholog); atherosclerosis (ortholog); colitis (ortholog); FOUND IN extracellular region (ortholog) 8 100261272 100262806 + 22301074;30032202 116908284 MODEL JAAIVD010000027;XM_032911544 XP_032767435 urocortin-2 protein-coding 625956023 Pld3 phospholipase D family member 3 ENCODES a protein that exhibits 5'-3' DNA exonuclease activity (ortholog); 5'-3' RNA exonuclease activity (ortholog); acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); INVOLVED IN innate immune response (ortholog); negative regulation of toll-like receptor 9 signaling pathway (ortholog); positive regulation of intralumenal vesicle formation (ortholog); ASSOCIATED WITH Alzheimer's disease 19 (ortholog); COVID-19 (ortholog); spinocerebellar ataxia 46 (ortholog); FOUND IN early endosome membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 2 168390366 168413172 + 22301074 116892423 MODEL JAAIVD010000001;XM_032894106;XM_032894108;XM_032894109;XM_032894110 XP_032749997;XP_032749999;XP_032750000;XP_032750001 phospholipase D3 protein-coding 625956049 Rftn1 raftlin, lipid raft linker 1 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); dsRNA transport (ortholog); membrane raft assembly (ortholog); ASSOCIATED WITH glaucoma (ortholog); FOUND IN cytoplasm (ortholog); endosome (ortholog); membrane raft (ortholog) 4 79769886 79951058 + 116899060 MODEL JAAIVD010000003;XM_032900531 XP_032756422 raftlin protein-coding 625956062 LOC116913743 protein ATP6V1FNB 12 78391951 78395211 + 116913743 MODEL JAAIVD010000007;XM_032918049 XP_032773940 protein-coding 625956067 LOC116904469 disks large homolog 5-like 6 136418486 136425420 - 116904469 MODEL JAAIVD010000024 pseudo 625956068 Cpap centrosome assembly and centriole elongation protein ENCODES a protein that exhibits gamma-tubulin binding (ortholog); identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN astral microtubule nucleation (ortholog); centriole assembly (ortholog); centriole elongation (ortholog); ASSOCIATED WITH autosomal recessive primary microcephaly (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 12 68274336 68327597 + 30032202 116913097 MODEL JAAIVD010000007;XM_032917229;XM_032917230;XR_004389595 XP_032773120;XP_032773121 Cenpj centromere protein J protein-coding 625956091 LOC116897661 U4 spliceosomal RNA 3 60666857 60666988 + 116897661 MODEL JAAIVD010000012 pseudo 625956092 Serpine3 serpin family E member 3 12 61724687 61746079 - 30032202 116913747 MODEL JAAIVD010000007;XM_032918055 XP_032773946 serpin E3 protein-coding 625956102 LOC116884508 protocadherin alpha-10 15 7370058 7373975 - 22301074 116884508 MODEL JAAIVD010000010;XM_032885636 XP_032741527 protein-coding 625956107 Smoc1 SPARC related modular calcium binding 1 ENCODES a protein that exhibits extracellular matrix binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); eye development (ortholog); limb development (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); microphthalmia with limb anomalies (ortholog); FOUND IN basement membrane (ortholog) 7 95251482 95446252 + 22301074;30032202 116905233 MODEL JAAIVD010000026;XM_032908057 XP_032763948 SPARC-related modular calcium-binding protein 1 protein-coding 625956122 Nmbr neuromedin B receptor ENCODES a protein that exhibits neuropeptide receptor activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); negative regulation of interleukin-6 production (ortholog); positive regulation of interferon-alpha production (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) 2 222455981 222467747 - 22301074 116893003 MODEL JAAIVD010000001;XM_032894964 XP_032750855 neuromedin-B receptor protein-coding 625956129 Cdhr5 cadherin related family member 5 ENCODES a protein that exhibits beta-catenin binding (ortholog); calcium ion binding (ortholog); cell adhesion molecule binding (ortholog); INVOLVED IN brush border assembly (ortholog); cell adhesion (ortholog); intermicrovillar adhesion (ortholog); FOUND IN apical plasma membrane (ortholog); brush border (ortholog); brush border membrane (ortholog) 2 8201810 8210555 + 22301074;30032202 116890877 MODEL JAAIVD010000001;XM_032891462;XM_032891463 XP_032747353;XP_032747354 cadherin-related family member 5 protein-coding 625956151 Telo2 telomere maintenance 2 ENCODES a protein that exhibits Hsp90 protein binding (ortholog); kinase binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN protein stabilization (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH epilepsy (ortholog); genetic disease (ortholog); microcephaly (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) 9 2369955 2384733 - 30032202 116910462 MODEL JAAIVD010000002;XM_032914331 XP_032770222 telomere length regulation protein TEL2 homolog protein-coding 625956176 LOC116895210 60S ribosomal protein L32-like 3 6212953 6216791 - 116895210 MODEL JAAIVD010000012 pseudo 625956177 Adgrf3 adhesion G protein-coupled receptor F3 7 23828514 23840160 + 22301074 116905684 MODEL JAAIVD010000026;XM_032908667;XM_032908668 XP_032764558;XP_032764559 adhesion G-protein coupled receptor F3 protein-coding 625956198 Cabs1 calcium binding protein, spermatid associated 1 ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN flagellated sperm motility (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH Anaphylaxis (ortholog); Inflammation (ortholog); FOUND IN acrosomal vesicle (ortholog); mitochondrial inner membrane (ortholog); motile cilium (ortholog) 11 995489 996704 - 22301074;30032202 116912848 MODEL JAAIVD010000006;XM_032917056 XP_032772947 calcium-binding and spermatid-specific protein 1 protein-coding 625956202 LOC116887640 corepressor interacting with RBPJ 1-like 1 224813435 224841553 + 116887640 MODEL JAAIVD010000025 pseudo 625956203 LOC116884172 proton myo-inositol cotransporter 1 264267423 264410620 - 22301074;30032202 116884172 MODEL JAAIVD010000025;XM_032885323 XP_032741214 protein-coding 625956214 LOC116887086 cysteine and glycine-rich protein 2-like 18 27295454 27296083 - 30032202 116887086 MODEL JAAIVD010000013;XM_032888594 XP_032744485 protein-coding 625956219 LOC116895023 small nucleolar RNA SNORA17 2 86709947 86710076 + 116895023 MODEL JAAIVD010000001;XR_004387209 snorna 625956222 LOC116888413 40S ribosomal protein S2-like X 29206124 29207034 - 116888413 MODEL JAAIVD010000014 pseudo 625956223 Ciz1 CDKN1A interacting zinc finger protein 1 ENCODES a protein that exhibits cyclin binding (ortholog); INVOLVED IN maintenance of protein location in nucleus (ortholog); positive regulation of DNA-templated DNA replication initiation (ortholog); random inactivation of X chromosome (ortholog); ASSOCIATED WITH dystonia (ortholog); dystonia 23 (ortholog); Ewing sarcoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 5 3253173 3268811 - 22301074;30032202 116901150 MODEL JAAIVD010000023;XM_032902782;XM_032902783;XM_032902784;XM_032902785;XM_032902786;XM_032902787;XM_032902788;XM_032902789;XM_032902790 XP_032758673;XP_032758674;XP_032758675;XP_032758676;XP_032758677;XP_032758678;XP_032758679;XP_032758680;XP_032758681 cip1-interacting zinc finger protein protein-coding 625956265 LOC116903736 zinc finger protein 708-like 6 13038185 13068589 - 22301074;30032202 116903736 MODEL JAAIVD010000024;XM_032906421 XP_032762312 protein-coding 625956273 Tgm6 transglutaminase 6 ENCODES a protein that exhibits protein-glutamine gamma-glutamyltransferase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant cerebellar ataxia (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog) 5 70324131 70338428 - 22301074;30032202 116900891 MODEL JAAIVD010000023;XM_032902566 XP_032758457 protein-glutamine gamma-glutamyltransferase 6 protein-coding 625956285 Slc17a3 solute carrier family 17 member 3 ENCODES a protein that exhibits efflux transmembrane transporter activity (ortholog); toxin transmembrane transporter activity (ortholog); transmembrane transporter activity (ortholog); INVOLVED IN organic anion transport (ortholog); urate metabolic process (ortholog); urate transport (ortholog); ASSOCIATED WITH gout (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog) 14 42823018 42845390 + 22301074;30032202 116883647 MODEL JAAIVD010000009;XM_032884838;XM_032884839;XM_032884841 XP_032740729;XP_032740730;XP_032740732 sodium-dependent phosphate transport protein 4 protein-coding 625956307 KEG97_t14 tRNA-Lys MT 7686 7749 + 64988252 trna 625956308 Rnh1 ribonuclease/angiogenin inhibitor 1 ENCODES a protein that exhibits ribonuclease inhibitor activity (ortholog); INVOLVED IN regulation of angiogenesis (ortholog); tRNA stabilization (ortholog); ASSOCIATED WITH ENCEPHALOPATHY, ACUTE, INFECTION-INDUCED, 3 (ortholog); FOUND IN angiogenin-PRI complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 8301283 8314051 + 22301074;30032202 116890884 MODEL JAAIVD010000001;XM_032891490;XM_032891491;XM_032891494 XP_032747381;XP_032747382;XP_032747385 ribonuclease inhibitor protein-coding 625956328 LOC116897420 U6 spliceosomal RNA 3 167377229 167377331 - 116897420 MODEL JAAIVD010000012;XR_004387462 snrna 625956331 LOC116910634 U6 spliceosomal RNA 9 90800479 90800581 + 116910634 MODEL JAAIVD010000002;XR_004389172 snrna 625956334 LOC116892783 vomeronasal type-2 receptor 116-like 2 185421928 185435120 + 116892783 MODEL JAAIVD010000001 pseudo 625956335 LOC116887900 eukaryotic translation initiation factor 2 subunit 3-like X 52130662 52158426 + 116887900 MODEL JAAIVD010000014 pseudo 625956336 Gatad2a GATA zinc finger domain containing 2A ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN anterior neuropore closure (ortholog); blood vessel development (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; ASSOCIATED WITH Genetic Predisposition to Disease (ortholog); Neurodevelopmental Disorders (ortholog); Stomach Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); NuRD complex (ortholog) 13 12175479 12264776 - 30032202 116914292 MODEL JAAIVD010000008;XM_032918522;XM_032918523;XM_032918524;XM_032918525;XM_032918526;XM_032918527;XM_032918528;XM_032918529;XM_032918530;XM_032918531 XP_032774413;XP_032774414;XP_032774415;XP_032774416;XP_032774417;XP_032774418;XP_032774419;XP_032774420;XP_032774421;XP_032774422 transcriptional repressor p66-alpha protein-coding 625956382 Golga5 golgin A5 ENCODES a protein that exhibits protein homodimerization activity (ortholog); protein-macromolecule adaptor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN Golgi organization (ortholog); Golgi vesicle transport (ortholog); retrograde transport, vesicle recycling within Golgi (ortholog); ASSOCIATED WITH Thyroid Neoplasms (ortholog); FOUND IN cis-Golgi network (ortholog); COPI-coated vesicle membrane (ortholog); Golgi apparatus (ortholog) 7 113746590 113773874 + 22301074;30032202 116905357 MODEL JAAIVD010000026;XM_032908275 XP_032764166 golgin subfamily A member 5 protein-coding 625956399 Ywhag tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma ENCODES a protein that exhibits identical protein binding (ortholog); insulin-like growth factor receptor binding (ortholog); phosphorylation-dependent protein binding (ortholog); INVOLVED IN cellular response to glucose starvation (ortholog); cellular response to insulin stimulus (ortholog); negative regulation of TORC1 signaling (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; interleukin-3 signaling pathway; mTOR signaling pathway; ASSOCIATED WITH Constipation (ortholog); COVID-19 (ortholog); Creutzfeldt-Jakob disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial matrix (ortholog) 16 18086020 18113887 + 30032202 116885158 MODEL JAAIVD010000004;XM_032886363 XP_032742254 14-3-3 protein gamma protein-coding 625956405 LOC116903124 solute carrier organic anion transporter family member 1A1 6 7449501 7494162 - 22301074;30032202 116903124 MODEL JAAIVD010000024;XM_032905476 XP_032761367 protein-coding 625956421 Golph3 golgi phosphoprotein 3 ENCODES a protein that exhibits cargo adaptor activity (ortholog); enzyme binding (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); INVOLVED IN asymmetric Golgi ribbon formation (ortholog); cell adhesion molecule production (ortholog); cell migration (ortholog); FOUND IN cytosol (ortholog); endosome (ortholog); Golgi apparatus (ortholog) 3 168740950 168768948 - 22301074;30032202 116897117 MODEL JAAIVD010000012;XM_032898762 XP_032754653 protein-coding 625956429 LOC116894651 c-Myc-binding protein-like 2 200687551 200687864 + 116894651 MODEL JAAIVD010000001 pseudo 625956430 LOC116887730 small nucleolar RNA SNORA17 18 10677613 10677743 + 116887730 MODEL JAAIVD010000013;XR_004386243 snorna 625956433 LOC116913236 armadillo-like helical domain-containing protein 4 12 73251372 73258764 - 116913236 MODEL JAAIVD010000007;XM_032917402 XP_032773293 protein-coding 625956439 LOC116893214 vomeronasal type-2 receptor 116-like 2 114182213 114217562 - 22301074;30032202 116893214 MODEL JAAIVD010000001;XM_032895099 XP_032750990 protein-coding 625956449 Hoxc13 homeobox C13 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN anatomical structure morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); hair follicle development (ortholog); ASSOCIATED WITH BILATERAL CLEFT LIP (ortholog); ectodermal dysplasia 9 (ortholog); FOUND IN nucleus (ortholog) 1 260155350 260161503 - 22301074;30032202 116890191 MODEL JAAIVD010000025;XM_032890927 XP_032746818 homeobox protein Hox-C13 protein-coding 625956453 LOC116894174 olfactory receptor 2D2 2 105230823 105231770 - 22301074 116894174 MODEL JAAIVD010000001;XM_032895890 XP_032751781 protein-coding 625956456 Mobp myelin associated oligodendrocyte basic protein ENCODES a protein that exhibits structural constituent of myelin sheath (ortholog); INVOLVED IN central nervous system myelin formation (ortholog); nervous system development (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); angiostrongyliasis (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); mitochondrion (ortholog) 8 111373832 111391941 + 30032202 116907937 MODEL JAAIVD010000027;XM_032911154;XM_032911155 XP_032767045;XP_032767046 myelin-associated oligodendrocyte basic protein protein-coding 625956467 Ppp1r16a protein phosphatase 1 regulatory subunit 16A 1 249017178 249026677 + 22301074;30032202 116913361 MODEL JAAIVD010000025;XM_032917522 XP_032773413 protein-coding 625956486 Rnf128 ring finger protein 128 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of cytokine production (ortholog); regulation of protein stability (ortholog); ASSOCIATED WITH Laterality Defects, Autosomal Dominant (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); late endosome (ortholog) X 92408267 92416529 - 116888644 MODEL JAAIVD010000014;XM_032889935 XP_032745826 E3 ubiquitin-protein ligase RNF128 protein-coding 625956493 LOC116907173 olfactory receptor 8B3-like 8 32374843 32375799 - 22301074;30032202 116907173 MODEL JAAIVD010000027;XM_032910127 XP_032766018 protein-coding 625956497 LOC116912045 calcium-regulated heat stable protein 1-like 11 84818148 84862132 - 116912045 MODEL JAAIVD010000006 pseudo 625956498 LOC116904733 small nucleolar RNA SNORA17 6 2557349 2557475 - 116904733 MODEL JAAIVD010000024;XR_004388423 snorna 625956501 Dcun1d1 defective in cullin neddylation 1 domain containing 1 ENCODES a protein that exhibits cullin family protein binding (ortholog); INVOLVED IN positive regulation of protein neddylation (ortholog); regulation of protein neddylation (ortholog); regulation of protein ubiquitination (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); ubiquitin ligase complex (ortholog) 3 118046186 118084093 + 30032202 116896938 MODEL JAAIVD010000012;XM_032898505 XP_032754396 DCN1-like protein 1 protein-coding 625956512 LOC116902932 60S ribosomal protein L27-like 6 116007779 116008247 - 22301074;30032202 116902932 MODEL JAAIVD010000024;XM_032905258 XP_032761149 protein-coding 625956517 LOC116890485 small nucleolar RNA SNORA51 1 117939023 117939145 - 116890485 MODEL JAAIVD010000025 pseudo 625956518 Zc3hav1 zinc finger CCCH-type containing, antiviral 1 ENCODES a protein that exhibits identical protein binding (ortholog); NAD+ binding (ortholog); NAD+ poly-ADP-ribosyltransferase activity (ortholog); INVOLVED IN cellular response to exogenous dsRNA (ortholog); cellular response to virus (ortholog); negative regulation of viral genome replication (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; FOUND IN cytoplasm (ortholog); cytosol (ortholog) 6 101477206 101524148 + 22301074 116903951 MODEL JAAIVD010000024;XM_032906737 XP_032762628 zinc finger CCCH-type antiviral protein 1 protein-coding 625956535 Ifngr1 interferon gamma receptor 1 ENCODES a protein that exhibits type II interferon receptor activity (ortholog); INVOLVED IN astrocyte activation (ortholog); defense response to virus (ortholog); microglial cell activation (ortholog); PARTICIPATES IN type II interferon signaling pathway; ASSOCIATED WITH allergic disease (ortholog); arteriosclerosis (ortholog); asthma (ortholog); FOUND IN dendrite (ortholog); membrane (ortholog); plasma membrane (ortholog) 2 216963207 216981834 - 22301074 116892983 MODEL JAAIVD010000001;XM_032894939 XP_032750830 protein-coding 625956546 Eef1g eukaryotic translation elongation factor 1 gamma INVOLVED IN response to virus (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog) 2 8967972 8978800 - 22301074;30032202 116890912 MODEL JAAIVD010000001;XM_032891540 XP_032747431 elongation factor 1-gamma protein-coding 625956560 LOC116887931 spindlin-1-like X 60673194 60673979 - 116887931 MODEL JAAIVD010000014 pseudo 625956561 Pip4k2a phosphatidylinositol-5-phosphate 4-kinase type 2 alpha ENCODES a protein that exhibits 1-phosphatidylinositol-4-phosphate 5-kinase activity (ortholog); 1-phosphatidylinositol-5-phosphate 4-kinase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process (ortholog); autophagosome-lysosome fusion (ortholog); megakaryocyte development (ortholog); PARTICIPATES IN phosphoinositide metabolic pathway; ASSOCIATED WITH melanoma (ortholog); FOUND IN autophagosome (ortholog); cytosol (ortholog); lysosome (ortholog) 14 5028683 5193306 + 22301074 116883174 MODEL JAAIVD010000009;XM_032884211;XM_032884212 XP_032740102;XP_032740103 phosphatidylinositol 5-phosphate 4-kinase type-2 alpha protein-coding 625956578 Atp5mk ATP synthase membrane subunit k ASSOCIATED WITH mitochondrial complex V (ATP synthase) deficiency nuclear type 6 (ortholog); FOUND IN mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) 2 46616680 46623159 - 116891263 MODEL JAAIVD010000001;XM_032892152 XP_032748043 Atp5md ATP synthase membrane subunit DAPIT;ATP synthase membrane subunit DAPIT, mitochondrial protein-coding 625956586 LOC116901024 magnesium transporter NIPA1-like 5 129530293 129531023 - 116901024 MODEL JAAIVD010000023 pseudo 625956587 LOC116883390 proteasome activator complex subunit 1-like 14 28766838 28767655 + 116883390 MODEL JAAIVD010000009 pseudo 625956588 Ca5a carbonic anhydrase 5A ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); ASSOCIATED WITH CARBONIC ANHYDRASE VA DEFICIENCY, HYPERAMMONEMIA DUE TO (ortholog); Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) 17 41560357 41589343 - 22301074;30032202 116886414 MODEL JAAIVD010000011;XM_032887890 XP_032743781 carbonic anhydrase 5A, mitochondrial protein-coding 625956599 LOC116886742 small nucleolar RNA SNORA17 17 38379331 38379468 + 116886742 MODEL JAAIVD010000011;XR_004386149 snorna 625956602 Slitrk1 SLIT and NTRK like family member 1 INVOLVED IN adult behavior (ortholog); axonogenesis (ortholog); endocytosis (ortholog); ASSOCIATED WITH Gilles de la Tourette syndrome (ortholog); trichotillomania (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog) 12 16215113 16219366 + 22301074;30032202 116913480 MODEL JAAIVD010000007;XM_032917682 XP_032773573 SLIT and NTRK-like protein 1 protein-coding 625956607 LOC116897943 olfactory receptor 5K3-like 4 43028408 43029334 + 22301074;30032202 116897943 MODEL JAAIVD010000003;XM_032899343 XP_032755234 protein-coding 625956610 Prkab2 protein kinase AMP-activated non-catalytic subunit beta 2 ENCODES a protein that exhibits AMP-activated protein kinase activity (ortholog); enzyme binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to nutrient levels (ortholog); positive regulation of cold-induced thermogenesis (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; FOUND IN apical plasma membrane (ortholog); cAMP-dependent protein kinase complex (ortholog); cytoplasm (ortholog) 3 59635638 59651072 - 30032202 116896486 MODEL JAAIVD010000012;XM_032897652;XM_032897653;XM_032897654;XM_032897655;XM_032897656 XP_032753543;XP_032753544;XP_032753545;XP_032753546;XP_032753547 5'-AMP-activated protein kinase subunit beta-2 protein-coding 625956635 LOC116888018 triosephosphate isomerase-like X 80557070 80557889 + 116888018 MODEL JAAIVD010000014 pseudo 625956636 LOC116898081 olfactory receptor 183-like 4 70325868 70326792 - 116898081 MODEL JAAIVD010000003 pseudo 625956637 Crim1 cysteine rich transmembrane BMP regulator 1 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN negative regulation of BMP signaling pathway (ortholog); negative regulation of osteoblast differentiation (ortholog) 7 14843524 15021163 - 22301074 116905906 MODEL JAAIVD010000026;XM_032908896 XP_032764787 cysteine-rich motor neuron 1 protein protein-coding 625956658 Ahcy adenosylhomocysteinase ENCODES a protein that exhibits adenosylhomocysteinase activity (ortholog); adenyl nucleotide binding (ortholog); copper ion binding (ortholog); INVOLVED IN chronic inflammatory response to antigenic stimulus (ortholog); circadian sleep/wake cycle (ortholog); modified amino acid catabolic process (ortholog); PARTICIPATES IN choline metabolic pathway; glycine N-methyltransferase deficiency pathway; homocysteine metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); amino acid metabolic disorder (ortholog); Animal Disease Models (ortholog); FOUND IN cytosol (ortholog) 5 134421563 134437117 - 30032202 116902169 MODEL JAAIVD010000023;XM_032904512 XP_032760403 protein-coding 625956672 LOC116884614 protocadherin beta-4-like 15 1019741 1025033 + 22301074 116884614 MODEL JAAIVD010000010;XM_032885754 XP_032741645 protein-coding 625956677 LOC116902765 60S ribosomal protein L6-like 6 69854377 69855282 + 116902765 MODEL JAAIVD010000024 pseudo 625956678 C17H16orf74 chromosome 17 C16orf74 homolog 17 40249493 40276018 - 116886101 MODEL JAAIVD010000011;XM_032887430 XP_032743321 uncharacterized protein C16orf74 homolog protein-coding 625956686 LOC116885253 fibrocystin-L-like 1 214453912 214508578 + 116885253 MODEL JAAIVD010000025;XM_032886525 XP_032742416 protein-coding 625956702 LOC116895966 fructose-bisphosphate aldolase A-like 3 147180450 147183217 - 116895966 MODEL JAAIVD010000012 pseudo 625956703 LOC116889017 aminoacyl tRNA synthase complex-interacting multifunctional protein 1-like X 101019202 101020167 - 116889017 MODEL JAAIVD010000014 pseudo 625956704 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92639851 92639922 + 116904828 MODEL JAAIVD010000024 trna 625956705 Slc2a6 solute carrier family 2 member 6 ENCODES a protein that exhibits D-glucose transmembrane transporter activity (ortholog); INVOLVED IN D-glucose transmembrane transport (ortholog); regulation of glycolytic process (ortholog); FOUND IN lysosomal membrane (ortholog) 5 9629633 9636242 + 22301074 116901246 MODEL JAAIVD010000023;XM_032902998;XM_032902999 XP_032758889;XP_032758890 solute carrier family 2, facilitated glucose transporter member 6 protein-coding 625956721 LOC116905413 zinc finger Ran-binding domain-containing protein 2-like 7 120436089 120438696 - 116905413 MODEL JAAIVD010000026;XR_004388524 pseudo 625956725 LOC116893767 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6-like 2 29964814 29966771 - 116893767 MODEL JAAIVD010000001 pseudo 625956726 Trappc2l trafficking protein particle complex subunit 2L ASSOCIATED WITH intellectual disability (ortholog); Progressive Early-Onset Encephalopathy with Episodic Rhabdomyolysis (ortholog); FOUND IN cytosol (ortholog); TRAPP complex (ortholog) 17 42239988 42243689 + 22301074;30032202 116886126 MODEL JAAIVD010000011;XM_032887465;XM_032887466 XP_032743356;XP_032743357 trafficking protein particle complex 2 like;trafficking protein particle complex subunit 2-like protein protein-coding 625956738 LOC116904360 sentrin-specific protease 6-like 6 82563432 82570133 + 116904360 MODEL JAAIVD010000024 pseudo 625956739 Atp6v0a1 ATPase H+ transporting V0 subunit a1 ENCODES a protein that exhibits ATPase binding (ortholog); INVOLVED IN regulation of macroautophagy (ortholog); synaptic vesicle lumen acidification (ortholog); ASSOCIATED WITH autistic disorder (ortholog); developmental and epileptic encephalopathy 104 (ortholog); Developmental Disabilities (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); perinuclear region of cytoplasm (ortholog) 9 60298879 60352961 + 22301074;30032202 116910185 MODEL JAAIVD010000002;XM_032914045;XM_032914046;XM_032914047;XM_032914048;XM_032914050;XM_032914051 XP_032769936;XP_032769937;XP_032769938;XP_032769939;XP_032769941;XP_032769942 V-type proton ATPase 116 kDa subunit a protein-coding 625956773 LOC116914960 G2/mitotic-specific cyclin-B2-like 13 13797228 13801861 - 116914960 MODEL JAAIVD010000008 pseudo 625956774 Pcsk2 proprotein convertase subtilisin/kexin type 2 ENCODES a protein that exhibits endopeptidase activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN enkephalin processing (ortholog); insulin processing (ortholog); islet amyloid polypeptide processing (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH chronic kidney disease (ortholog); Endotoxemia (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN dendrite (ortholog); extracellular region (ortholog); membrane (ortholog) 5 123199035 123469328 + 22301074;30032202 116902035 MODEL JAAIVD010000023;XM_032904319 XP_032760210 neuroendocrine convertase 2 protein-coding 625956790 Mcrip2 MAPK regulated corepressor interacting protein 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog); RNA binding (ortholog); INVOLVED IN branched-chain amino acid metabolic process (ortholog); cold-induced thermogenesis (ortholog); fatty acid metabolic process (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) 9 3129235 3134136 - 116909666 MODEL JAAIVD010000002;XM_032913319;XM_032913320;XR_004389089 XP_032769210;XP_032769211 protein-coding 625956805 LOC116900435 olfactory receptor 4C15-like 5 70699336 70700250 - 22301074 116900435 MODEL JAAIVD010000023;XM_032902176 XP_032758067 protein-coding 625956808 LOC116900061 uncharacterized LOC116900061 5 6450066 6451540 + 116900061 MODEL JAAIVD010000023;XR_004387912 ncrna 625956814 Tamalin trafficking regulator and scaffold protein tamalin ENCODES a protein that exhibits identical protein binding (ortholog); PDZ domain binding (ortholog); small GTPase binding (ortholog); INVOLVED IN regulation of postsynaptic neurotransmitter receptor internalization (ortholog); signal transduction (ortholog); ASSOCIATED WITH schizophrenia (ortholog); syndromic microphthalmia 5 (ortholog); FOUND IN glutamatergic synapse (ortholog); plasma membrane (ortholog); postsynaptic density (ortholog) 1 261858159 261866395 - 22301074;30032202 116883797 MODEL JAAIVD010000025;XM_032885045 XP_032740936 general receptor for phosphoinositides 1-associated scaffold protein protein-coding 625956826 LOC116890307 U4 spliceosomal RNA 1 107648438 107648578 + 116890307 MODEL JAAIVD010000025;XR_004386537 snrna 625956829 LOC116912156 tensin-2-like 11 77695900 77750232 - 116912156 MODEL JAAIVD010000006;XM_032916076;XM_032916077 XP_032771967;XP_032771968 protein-coding 625956840 Ranbp3l RAN binding protein 3 like ENCODES a protein that exhibits SMAD binding (ortholog); INVOLVED IN mesenchymal cell differentiation involved in bone development (ortholog); negative regulation of osteoblast differentiation (ortholog); positive regulation of myoblast differentiation (ortholog) 3 171521320 171568313 - 30032202 116896004 MODEL JAAIVD010000012;XM_032897028 XP_032752919 ran-binding protein 3-like protein-coding 625956861 LOC116898018 N-lysine methyltransferase KMT5A-like 4 76946263 76947418 - 116898018 MODEL JAAIVD010000003 pseudo 625956862 Ms4a10 membrane spanning 4-domains A10 2 10443930 10457059 - 30032202 116893639 MODEL JAAIVD010000001;XM_032895353 XP_032751244 membrane-spanning 4-domains subfamily A member 10 protein-coding 625956874 LOC116895118 small nucleolar RNA U3 2 36983355 36983511 + 116895118 MODEL JAAIVD010000001 pseudo 625956875 Polh DNA polymerase eta ENCODES a protein that exhibits DNA-directed DNA polymerase activity (ortholog); INVOLVED IN cellular response to UV-C (ortholog); DNA damage tolerance (ortholog); DNA synthesis involved in DNA repair (ortholog); ASSOCIATED WITH breast cancer (ortholog); female breast cancer (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (ortholog) 4 83665490 83698030 + 22301074;30032202 116899120 MODEL JAAIVD010000003;XM_032900641;XM_032900642 XP_032756532;XP_032756533 protein-coding 625956893 LOC116900275 olfactory receptor 5AL1-like 5 63402979 63403920 - 22301074;30032202 116900275 MODEL JAAIVD010000023;XM_032902028 XP_032757919 protein-coding 625956896 LOC116904496 NEDD4-binding protein 1-like 6 156711193 156731276 + 116904496 MODEL JAAIVD010000024 pseudo 625956897 LOC116892588 macrophage migration inhibitory factor-like 2 172331305 172331739 + 116892588 MODEL JAAIVD010000001 pseudo 625956898 LOC116895410 60S ribosomal protein L9-like 3 61368998 61369807 - 116895410 MODEL JAAIVD010000012 pseudo 625956899 Ccni cyclin I FOUND IN Golgi apparatus (ortholog) 11 5984633 6007482 - 30032202 116912330 MODEL JAAIVD010000006;XM_032916374;XM_032916375 XP_032772265;XP_032772266 cyclin-I protein-coding 625956913 LOC116910695 small nucleolar RNA SNORA33 9 61528351 61528482 + 116910695 MODEL JAAIVD010000002;XR_004389223 snorna 625956916 LOC116897417 U6 spliceosomal RNA 3 17964686 17964792 + 116897417 MODEL JAAIVD010000012;XR_004387459 snrna 625956919 LOC116890289 mucin-2-like 1 24045833 24058118 + 116890289 MODEL JAAIVD010000025;XM_032891000 XP_032746891 protein-coding 625956929 LOC116909775 zinc finger protein 844-like 9 62153387 62170862 - 116909775 MODEL JAAIVD010000002;XM_032913466 XP_032769357 protein-coding 625956936 Rela RELA proto-oncogene, NF-kB subunit ENCODES a protein that exhibits actinin binding (ortholog); ankyrin repeat binding (ortholog); chromatin binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); antiviral innate immune response (ortholog); canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN ceramide signaling pathway; interleukin-1 signaling pathway; interleukin-12 signaling pathway; ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); adenocarcinoma (ortholog); alcohol dependence (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 2045437 2055534 - 22301074;30032202 116890708 MODEL JAAIVD010000001;XM_032891139;XM_032891140 XP_032747030;XP_032747031 transcription factor p65 protein-coding 625956953 LOC116904321 sperm motility kinase X-like 6 61138493 61161243 - 116904321 MODEL JAAIVD010000024 pseudo 625956954 Coro2a coronin 2A ASSOCIATED WITH myoepithelioma (ortholog); FOUND IN brush border (ortholog); transcription repressor complex (ortholog) 1 99620177 99648850 - 30032202 116901917 MODEL JAAIVD010000025;XM_032904138 XP_032760029 coronin-2A protein-coding 625956969 Shc3 SHC adaptor protein 3 ENCODES a protein that exhibits phosphotyrosine residue binding (ortholog); INVOLVED IN learning or memory (ortholog); synaptic transmission, glutamatergic (ortholog); ASSOCIATED WITH Ependymomas (ortholog); FOUND IN nucleoplasm (ortholog) 14 69816284 69940946 - 22301074;30032202;9507002 116883303 MODEL AB001453;JAAIVD010000009;XM_032884350 BAA28175;XP_032740241 N-Shc SHC-transforming protein 3 protein-coding 625956985 Tspyl1 TSPY like 1 ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); ASSOCIATED WITH COVID-19 (ortholog); gonadal dysgenesis (ortholog); sudden infant death syndrome (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 18 36130050 36132601 - 22301074;30032202 116887167 MODEL JAAIVD010000013;XM_032888718 XP_032744609 testis-specific Y-encoded-like protein 1 protein-coding 625956990 LOC116896091 protein FAM98B-like 3 218379580 218396569 - 116896091 MODEL JAAIVD010000012 pseudo 625956991 LOC116883763 60S ribosomal protein L35a-like 14 393326 393736 - 22301074;30032202 116883763 MODEL JAAIVD010000009;XM_032885010 XP_032740901 protein-coding 625956996 Chst3 carbohydrate sulfotransferase 3 ENCODES a protein that exhibits chondroitin 6-sulfotransferase activity (ortholog); proteoglycan sulfotransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); peripheral nervous system axon regeneration (ortholog); response to axon injury (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); Larsen syndrome (ortholog); FOUND IN Golgi apparatus (ortholog) 18 26003800 26036940 - 22301074;30032202 116887119 MODEL JAAIVD010000013;XM_032888666 XP_032744557 protein-coding 625957003 LOC116914174 U6 spliceosomal RNA 12 83863835 83863940 - 116914174 MODEL JAAIVD010000007;XR_004389718 snrna 625957006 Rabl2b RAB, member of RAS oncogene family like 2B ENCODES a protein that exhibits G protein activity (ortholog); GTP binding (ortholog); INVOLVED IN cilium assembly (ortholog); flagellated sperm motility (ortholog); intraciliary transport (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 1 258888625 258897290 - 22301074;30032202 116915216 MODEL JAAIVD010000025;XM_032919601;XM_032919610;XM_032919617 XP_032775492;XP_032775501;XP_032775508 rab-like protein 2B protein-coding 625957023 Nek11 NIMA related kinase 11 ENCODES a protein that exhibits ATP binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN intracellular signal transduction (ortholog); mitotic intra-S DNA damage checkpoint signaling (ortholog); protein phosphorylation (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 8 96453840 96687076 - 22301074;30032202 116907449 MODEL JAAIVD010000027;XM_032910420 XP_032766311 serine/threonine-protein kinase Nek11 protein-coding 625957045 Sdha succinate dehydrogenase complex flavoprotein subunit A ENCODES a protein that exhibits succinate dehydrogenase (quinone) activity (ortholog); INVOLVED IN nervous system development (ortholog); respiratory electron transport chain (ortholog); succinate metabolic process (ortholog); PARTICIPATES IN citric acid cycle pathway; electron transport chain pathway; fumaric aciduria pathway; ASSOCIATED WITH B-lymphoblastic leukemia/lymphoma with hypodiploidy (ortholog); Brain Neoplasms (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 2 203749670 203772776 - 22301074;30032202 116892915 MODEL JAAIVD010000001;XM_032894841 XP_032750732 succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial protein-coding 625957063 LOC116890499 small nucleolar RNA SNORA48 1 108968820 108968961 - 116890499 MODEL JAAIVD010000025;XR_004386685 snorna 625957066 Riox1 ribosomal oxygenase 1 ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); histone H3K36 demethylase activity (ortholog); histone H3K4me/H3K4me2/H3K4me3 demethylase activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of osteoblast differentiation (ortholog); regulation of DNA repair (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) 7 98035128 98037746 + 30032202 116905256 MODEL JAAIVD010000026;XM_032908109 XP_032764000 protein-coding 625957071 LOC116887889 eukaryotic translation initiation factor 4B-like X 50239423 50241024 + 116887889 MODEL JAAIVD010000014 pseudo 625957072 Trim8 tripartite motif containing 8 ENCODES a protein that exhibits identical protein binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); host-mediated suppression of symbiont invasion (ortholog); innate immune response (ortholog); ASSOCIATED WITH electroclinical syndrome (ortholog); epilepsy (ortholog); Focal Segmental Glomerulosclerosis and Neurodevelopmental Syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 2 45969119 45983898 + 116891251 MODEL JAAIVD010000001;XM_032892131 XP_032748022 E3 ubiquitin-protein ligase TRIM8 protein-coding 625957082 LOC116894784 aldehyde dehydrogenase family 3 member B3 2 3681527 3689994 - 22301074;30032202 116894784 MODEL JAAIVD010000001;XM_032896435 XP_032752326 protein-coding 625957096 LOC116906437 small nucleolar RNA SNORA17 7 78470347 78470478 + 116906437 MODEL JAAIVD010000026;XR_004388697 snorna 625957099 LOC116906599 uncharacterized LOC116906599 8 36280792 36336680 - 116906599 MODEL JAAIVD010000027;XR_004388754 ncrna 625957105 LOC116887988 galectin-8-like X 72424135 72431500 - 22301074 116887988 MODEL JAAIVD010000014;XM_032889421 XP_032745312 protein-coding 625957110 LOC116907132 40S ribosomal protein S6-like 8 21211578 21212315 - 116907132 MODEL JAAIVD010000027 pseudo 625957111 LOC116905216 uncharacterized LOC116905216 7 59051430 59057452 + 116905216 MODEL JAAIVD010000026;XR_004388500 ncrna 625957116 Mmp15 matrix metallopeptidase 15 INVOLVED IN endodermal cell differentiation (ortholog); response to estradiol (ortholog); ASSOCIATED WITH Developmental Disease (ortholog); Experimental Liver Cirrhosis (ortholog); Experimental Mammary Neoplasms (ortholog) 17 2209986 2231381 + 22301074;30032202 116886320 MODEL JAAIVD010000011;XM_032887764 XP_032743655 matrix metalloproteinase-15 protein-coding 625957130 Adam32 ADAM metallopeptidase domain 32 FOUND IN cell surface (ortholog); sperm principal piece (ortholog) 13 61526786 61626644 + 22301074;30032202 116914641 MODEL JAAIVD010000008;XM_032919035 XP_032774926 disintegrin and metalloproteinase domain-containing protein 32 protein-coding 625957156 Irf8 interferon regulatory factor 8 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to type II interferon (ortholog); defense response to bacterium (ortholog); PARTICIPATES IN granulocyte-macrophage colony-stimulating factor signaling pathway; ASSOCIATED WITH B-lymphoblastic leukemia/lymphoma (ortholog); Behcet's disease (ortholog); cardiomyopathy (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 17 40378861 40400439 + 22301074;30032202 116886350 MODEL JAAIVD010000011;XM_032887801 XP_032743692 protein-coding 625957169 Plaat5 phospholipase A and acyltransferase 5 ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); glycerophospholipid phospholipase A1 activity (ortholog); N-acyltransferase activity (ortholog); INVOLVED IN N-acylphosphatidylethanolamine metabolic process (ortholog) 2 131924 142693 - 30032202 116894776 MODEL JAAIVD010000001;XM_032896430 XP_032752321 protein-coding 625957176 LOC116883517 histone H2A type 1-B 14 41930839 41931607 + 22301074;30032202 116883517 MODEL JAAIVD010000009;XM_032884689;XM_032884690 XP_032740580;XP_032740581 protein-coding 625957183 Pkd1l2 polycystin-1-like protein 2 ASSOCIATED WITH long QT syndrome (ortholog); Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); otosclerosis 4 (ortholog) 17 36643695 36736934 - 22301074;30032202 116886169 MODEL JAAIVD010000011;XM_032887540 XP_032743431 polycystic kidney disease protein 1-like 2;polycystin 1 like 2 protein-coding 625957230 LOC116909211 histone deacetylase 1-like 9 7507359 7566943 + 116909211 MODEL JAAIVD010000002 pseudo 625957231 LOC116911038 olfactory receptor 6C1-like 1 161843206 161843796 - 116911038 MODEL JAAIVD010000025 pseudo 625957232 LOC116893802 acyl-CoA desaturase 2-like 2 43768088 43781325 + 116893802 MODEL JAAIVD010000001 pseudo 625957233 LOC116908256 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like 8 94971642 95063329 + 116908256 MODEL JAAIVD010000027 pseudo 625957234 LOC116901541 tetratricopeptide repeat protein 30A1 5 53333186 53336034 - 22301074;30032202 116901541 MODEL JAAIVD010000023;XM_032903525 XP_032759416 protein-coding 625957239 Fndc11 fibronectin type III domain containing 11 5 158317023 158319425 + 22301074 116900800 MODEL JAAIVD010000023;XM_032902512 XP_032758403 fibronectin type III domain-containing protein 11 protein-coding 625957245 Mccc2 methylcrotonyl-CoA carboxylase subunit 2 ENCODES a protein that exhibits methylcrotonoyl-CoA carboxylase activity (ortholog); INVOLVED IN coenzyme A metabolic process (ortholog); L-leucine catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH 3-methylcrotonyl-CoA carboxylase 2 deficiency (ortholog); 3-methylcrotonyl-CoA carboxylase deficiency (ortholog); autism spectrum disorder (ortholog); FOUND IN methylcrotonoyl-CoA carboxylase complex (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 3 196590311 196657303 + 30032202 116897246 MODEL JAAIVD010000012;XM_032898975;XM_032898976 XP_032754866;XP_032754867 methylcrotonoyl-CoA carboxylase 2;methylcrotonoyl-CoA carboxylase beta chain, mitochondrial protein-coding 625957267 LOC116904515 60S ribosomal protein L35a-like 6 6845304 6845635 - 116904515 MODEL JAAIVD010000024 pseudo 625957268 Gramd1c GRAM domain containing 1C ENCODES a protein that exhibits cholesterol binding (ortholog); cholesterol transfer activity (ortholog); INVOLVED IN cellular response to cholesterol (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog); plasma membrane (ortholog) 4 28873074 28974812 - 30032202 116898301 MODEL JAAIVD010000003;XM_032899647 XP_032755538 protein Aster-C protein-coding 625957291 Mxd3 MAX dimerization protein 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN RNA polymerase II transcription regulator complex (ortholog) 14 73649998 73653973 - 22301074;30032202 116883467 MODEL JAAIVD010000009;XM_032884620 XP_032740511 protein-coding 625957301 Trib1 tribbles pseudokinase 1 ENCODES a protein that exhibits mitogen-activated protein kinase kinase binding (ortholog); protein kinase binding (ortholog); protein kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of JNK cascade (ortholog); negative regulation of lipopolysaccharide-mediated signaling pathway (ortholog); negative regulation of MAPK cascade (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); Hypertriglyceridemia (ortholog); metabolic dysfunction-associated steatotic liver disease (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 1 234161260 234169234 + 22301074;30032202 116912020 MODEL JAAIVD010000025;XM_032915911 XP_032771802 tribbles homolog 1 protein-coding 625957308 LOC116888111 L-lactate dehydrogenase A chain-like X 100808072 100809098 - 116888111 MODEL JAAIVD010000014 pseudo 625957309 Ces3 carboxylesterase 3 ASSOCIATED WITH adult respiratory distress syndrome (ortholog); autism spectrum disorder (ortholog); Experimental Liver Cirrhosis (ortholog) 17 24843043 24851495 + 116886560 MODEL JAAIVD010000011;XM_032888078 XP_032743969 protein-coding 625957326 LOC116902624 U1 spliceosomal RNA 5 100492937 100493083 - 116902624 MODEL JAAIVD010000023 pseudo 625957327 LOC116898168 60S ribosomal protein L23-like 4 123996960 123997383 + 116898168 MODEL JAAIVD010000003 pseudo 625957328 Mybphl myosin binding protein H like INVOLVED IN in utero embryonic development (ortholog); ASSOCIATED WITH Brugada syndrome (ortholog); Hydrops Fetalis (ortholog); hypertrophic cardiomyopathy (ortholog); FOUND IN myofilament (ortholog) 3 49877211 49892200 - 22301074 116896363 MODEL JAAIVD010000012;XM_032897475 XP_032753366 myosin-binding protein H-like protein-coding 625957341 LOC116888640 testin-like X 92436891 92438111 - 116888640 MODEL JAAIVD010000014 pseudo 625957342 Tuba4a tubulin alpha 4a ENCODES a protein that exhibits enzyme binding (ortholog); protein kinase binding (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 10 (ortholog); amyotrophic lateral sclerosis type 22 (ortholog); FOUND IN cilium (ortholog); cytoskeleton (ortholog); microtubule (ortholog) 4 148572269 148576630 - 22301074;30032202 116899525 MODEL JAAIVD010000003;XM_032901392 XP_032757283 tubulin alpha-4A chain protein-coding 625957350 Dmtf1 cyclin D binding myb like transcription factor 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleoplasm (ortholog) 6 140954628 140995015 - 30032202 116904147 MODEL JAAIVD010000024;XM_032907043;XM_032907044 XP_032762934;XP_032762935 cyclin-D-binding Myb-like transcription factor 1 protein-coding 625957375 Prcc proline rich mitotic checkpoint control factor INVOLVED IN regulation of cell cycle (ortholog); ASSOCIATED WITH papillary renal cell carcinoma (ortholog); renal cell carcinoma (ortholog); Renal Cell Carcinoma 1 (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) 3 65672619 65697824 + 30032202 116896713 MODEL JAAIVD010000012;XM_032898132 XP_032754023 proline-rich protein PRCC protein-coding 625957386 Bod1 biorientation of chromosomes in cell division 1 ENCODES a protein that exhibits protein phosphatase 2A binding (ortholog); protein phosphatase inhibitor activity (ortholog); INVOLVED IN mitotic metaphase chromosome alignment (ortholog); mitotic sister chromatid biorientation (ortholog); mitotic sister chromatid cohesion, centromeric (ortholog); FOUND IN centrosome (ortholog); outer kinetochore (ortholog); spindle microtubule (ortholog) 9 4276964 4283260 + 116909690 MODEL JAAIVD010000002;XM_032913352 XP_032769243 biorientation of chromosomes in cell division protein 1 protein-coding 625957394 Tacc3 transforming acidic coiled-coil containing protein 3 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein sequestering activity (ortholog); INVOLVED IN astral microtubule organization (ortholog); cell population proliferation (ortholog); cerebral cortex development (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); hereditary breast ovarian cancer syndrome (ortholog); transitional cell carcinoma (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 11 71167245 71182474 - 30032202 116912344 MODEL JAAIVD010000006;XM_032916393;XM_032916394 XP_032772284;XP_032772285 transforming acidic coiled-coil-containing protein 3 protein-coding 625957418 LOC116888196 RNA polymerase II elongation factor ELL2-like X 125924975 125934360 - 22301074;30032202 116888196 MODEL JAAIVD010000014;XM_032889503 XP_032745394 protein-coding 625957423 Fcamr Fc alpha and mu receptor ENCODES a protein that exhibits IgA binding (ortholog); IgM binding (ortholog); transmembrane signaling receptor activity (ortholog) 10 4992935 5001902 - 30032202 116911520 MODEL JAAIVD010000005;XM_032915513 XP_032771404 Fc fragment of IgA and IgM receptor;high affinity immunoglobulin alpha and immunoglobulin mu Fc receptor protein-coding 625957432 Lrrc7 leucine rich repeat containing 7 ENCODES a protein that exhibits protein kinase binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN positive regulation of neuron projection development (ortholog); regulation of long-term synaptic depression (ortholog); response to toluene (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; ASSOCIATED WITH cocaine dependence (ortholog); Cocaine-Related Disorders (ortholog); intellectual disability (ortholog); FOUND IN actin cytoskeleton (ortholog); axon initial segment (ortholog); cytosol (ortholog) 3 3045939 3499257 + 22301074;30032202 116896122 MODEL JAAIVD010000012;XM_032897087;XM_032897088;XM_032897089;XM_032897090;XM_032897091;XM_032897092;XM_032897093;XM_032897094;XM_032897096;XM_032897097;XM_032897098 XP_032752978;XP_032752979;XP_032752980;XP_032752981;XP_032752982;XP_032752983;XP_032752984;XP_032752985;XP_032752987;XP_032752988;XP_032752989 leucine-rich repeat-containing protein 7 protein-coding 625957491 LOC116913905 elongation factor 1-gamma-like 12 26131191 26177412 - 116913905 MODEL JAAIVD010000007 pseudo 625957492 LOC116900818 ADP-ribosylation factor 4-like 5 37840916 37841450 - 116900818 MODEL JAAIVD010000023 pseudo 625957493 Aopep aminopeptidase O (putative) ASSOCIATED WITH atrial fibrillation (ortholog); dystonia 31 (ortholog); Fanconi anemia (ortholog); FOUND IN nucleolus (ortholog) 14 76233649 76540744 - 22301074;30032202 116883284 MODEL JAAIVD010000009;XM_032884275;XM_032884276;XM_032884277 XP_032740166;XP_032740167;XP_032740168 aminopeptidase O protein-coding 625957521 Mageh1 MAGE family member H1 FOUND IN nucleolus (ortholog) X 18269974 18271445 - 30032202 116889094 MODEL JAAIVD010000014;XM_032890264 XP_032746155 melanoma-associated antigen H1 protein-coding 625957526 LOC116900417 olfactory receptor 4P4-like 5 70404773 70405699 - 22301074 116900417 MODEL JAAIVD010000023;XM_032902161 XP_032758052 protein-coding 625957529 Gdpgp1 GDP-D-glucose phosphorylase 1 ENCODES a protein that exhibits GDP-D-glucose phosphorylase activity (ortholog); INVOLVED IN glucose metabolic process (ortholog); response to stress (ortholog) 2 120011494 120019260 - 30032202 116891927 MODEL JAAIVD010000001;XM_032893361;XM_032893362;XM_032893363 XP_032749252;XP_032749253;XP_032749254 protein-coding 625957541 LOC116909120 ATP-binding cassette sub-family A member 17 9 1554745 1634090 - 22301074;30032202 116909120 MODEL JAAIVD010000002;XM_032912596 XP_032768487 protein-coding 625957574 LOC116894095 olfactory receptor 52K1-like 2 103317717 103318643 + 22301074 116894095 MODEL JAAIVD010000001;XM_032895814 XP_032751705 protein-coding 625957577 LOC116896077 glyceraldehyde-3-phosphate dehydrogenase-like 3 213779812 213780222 - 22301074;30032202 116896077 MODEL JAAIVD010000012;XM_032897058 XP_032752949 protein-coding 625957580 Susd5 sushi domain containing 5 INVOLVED IN Notch signaling pathway (ortholog) 8 104922014 104958850 + 22301074;30032202 116907810 MODEL JAAIVD010000027;XM_032910988 XP_032766879 sushi domain-containing protein 5 protein-coding 625957589 LOC116911622 L-lactate dehydrogenase A chain-like 10 6825326 6826605 - 22301074 116911622 MODEL JAAIVD010000005;XM_032915590 XP_032771481 protein-coding 625957594 LOC116909109 uncharacterized LOC116909109 9 81882950 81884310 + 116909109 MODEL JAAIVD010000002;XR_004389050 ncrna 625957598 Abhd8 abhydrolase domain containing 8 INVOLVED IN negative regulation of NLRP3 inflammasome complex assembly (ortholog); FOUND IN cytoplasm (ortholog) 13 13523600 13530307 + 22301074 116915097 MODEL JAAIVD010000008;XM_032919525 XP_032775416 protein ABHD8 protein-coding 625957607 Mos MOS proto-oncogene, serine/threonine kinase ENCODES a protein that exhibits MRF binding (ortholog); protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to nerve growth factor stimulus (ortholog); chromatin organization (ortholog); ASSOCIATED WITH Female Infertility (ortholog); Oocyte/Zygote/Embryo Maturation Arrest 20 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 7 72855401 72857378 + 22301074;30032202 116905720 MODEL JAAIVD010000026;XM_032908689 XP_032764580 proto-oncogene serine/threonine-protein kinase mos protein-coding 625957612 Zbtb39 zinc finger and BTB domain containing 39 1 206187189 206194810 + 22301074;30032202 116910239 MODEL JAAIVD010000025;XM_032914130;XM_032914138 XP_032770021;XP_032770029 zinc finger and BTB domain-containing protein 39 protein-coding 625957621 LOC116893154 tubulin alpha-1B chain-like 2 100970045 100971451 - 116893154 MODEL JAAIVD010000001 pseudo 625957622 LOC116914430 60S ribosomal protein L34-like 13 6800424 6800851 + 22301074;30032202 116914430 MODEL JAAIVD010000008;XM_032918727 XP_032774618 protein-coding 625957627 Slc9a6 solute carrier family 9 member A6 ENCODES a protein that exhibits identical protein binding (ortholog); potassium:proton antiporter activity (ortholog); sodium:proton antiporter activity (ortholog); INVOLVED IN axon extension (ortholog); brain-derived neurotrophic factor receptor signaling pathway (ortholog); dendrite extension (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT2 receptor; ASSOCIATED WITH astigmatism (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2A (ortholog); Christianson syndrome (ortholog); FOUND IN axon terminus (ortholog); axonal spine (ortholog); cytoplasmic vesicle (ortholog) X 116540812 116597768 - 22301074;30032202 116888295 MODEL JAAIVD010000014;XM_032889568;XM_032889569 XP_032745459;XP_032745460 sodium/hydrogen exchanger 6 protein-coding 625957651 LOC116900386 olfactory receptor 5D18-like 5 69689250 69690230 - 22301074;30032202 116900386 MODEL JAAIVD010000023;XM_032902133 XP_032758024 protein-coding 625957654 Tspan3 tetraspanin 3 ASSOCIATED WITH colorectal cancer (ortholog) 8 50061341 50085072 - 22301074;30032202 116906693 MODEL JAAIVD010000027;XM_032909484 XP_032765375 tetraspanin-3 protein-coding 625957665 Bnip5 BCL2 interacting protein 5 ASSOCIATED WITH prostate cancer (ortholog) 18 4948577 4965377 + 116887351 MODEL JAAIVD010000013;XM_032888945 XP_032744836 protein BNIP5 protein-coding 625957681 LOC116910099 probable E3 ubiquitin-protein ligase MARCH10 9 73639717 73691181 + 116910099 MODEL JAAIVD010000002;XM_032913926 XP_032769817 protein-coding 625957691 LOC116883533 uncharacterized LOC116883533 14 67513439 67517114 + 116883533 MODEL JAAIVD010000009;XR_004385769 ncrna 625957695 Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 ENCODES a protein that exhibits dynein complex binding (ortholog); dynein intermediate chain binding (ortholog); identical protein binding (ortholog); INVOLVED IN acrosome assembly (ortholog); actin cytoskeleton organization (ortholog); adult locomotory behavior (ortholog); PARTICIPATES IN altered Reelin signaling pathway; Reelin signaling pathway; ASSOCIATED WITH Abnormal Cortical Gyration (ortholog); Carcinogenesis (ortholog); Classical Lissencephalies and Subcortical Band Heterotopias (ortholog); FOUND IN 1-alkyl-2-acetylglycerophosphocholine esterase complex (ortholog); astral microtubule (ortholog); axon (ortholog) 9 93406083 93464249 - 22301074 116909702 MODEL JAAIVD010000002;XM_032913370;XM_032913371;XM_032913372 XP_032769261;XP_032769262;XP_032769263 platelet-activating factor acetylhydrolase IB subunit alpha protein-coding 625957716 Eif2s3 eukaryotic translation initiation factor 2 subunit gamma ENCODES a protein that exhibits translation factor activity, RNA binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN cytoplasmic translational initiation (ortholog); translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH genetic disease (ortholog); MEHMO syndrome (ortholog); FOUND IN cytoplasm (ortholog); eukaryotic translation initiation factor 2 complex (ortholog); nucleus (ortholog) X 52101578 52124302 - 22301074;30032202 116888424 MODEL JAAIVD010000014;XM_032889694 XP_032745585 eukaryotic translation initiation factor 2 subunit 3 protein-coding 625957732 Trnag-ucc transfer RNA glycine (anticodon UCC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60800646 60800717 + 116897686 MODEL JAAIVD010000012 trna 625957733 Olfml3 olfactomedin like 3 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); prostate cancer (ortholog) 3 54333898 54336717 + 30032202 116896445 MODEL JAAIVD010000012;XM_032897598 XP_032753489 olfactomedin-like protein 3 protein-coding 625957740 LOC116899911 small nucleolar RNA U13 4 158675554 158675658 - 116899911 MODEL JAAIVD010000003;XR_004387883 snorna 625957743 LOC116899485 uncharacterized LOC116899485 1 50564508 50971618 - 116899485 MODEL JAAIVD010000025;XR_004387730 ncrna 625957748 LOC116894832 U6 spliceosomal RNA 2 164626711 164626817 - 116894832 MODEL JAAIVD010000001;XR_004387047 snrna 625957751 Clnk cytokine dependent hematopoietic cell linker ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); intracellular signal transduction (ortholog); mast cell degranulation (ortholog); ASSOCIATED WITH vitiligo (ortholog); FOUND IN cytoplasm (ortholog); mast cell granule (ortholog); protein-containing complex (ortholog) 11 66329379 66499355 + 30032202 116912382 MODEL JAAIVD010000006;XM_032916441 XP_032772332 cytokine-dependent hematopoietic cell linker protein-coding 625957773 Rdh5 retinol dehydrogenase 5 ENCODES a protein that exhibits all-trans-retinol dehydrogenase (NAD+) activity (ortholog); androstan-3-alpha,17-beta-diol dehydrogenase (NAD+) activity (ortholog); androsterone dehydrogenase [NAD(P)+] activity (ortholog); INVOLVED IN retinoid metabolic process (ortholog); steroid metabolic process (ortholog); PARTICIPATES IN retinoid cycle metabolic pathway; ASSOCIATED WITH Congenital Abnormalities (ortholog); fundus albipunctatus (ortholog); myopia (ortholog); FOUND IN cell body (ortholog); endoplasmic reticulum lumen (ortholog); endoplasmic reticulum membrane (ortholog) 1 156390476 156396016 - 116906601 MODEL JAAIVD010000025;XM_032909352;XM_032909359;XM_032909368 XP_032765243;XP_032765250;XP_032765259 protein-coding 625957787 LOC116894223 trace amine-associated receptor 8a 2 106797455 106798578 - 22301074;30032202 116894223 MODEL JAAIVD010000001;XM_032895934 XP_032751825 protein-coding 625957791 Chrd chordin ENCODES a protein that exhibits BMP binding (ortholog); heparan sulfate proteoglycan binding (ortholog); heparin binding (ortholog); INVOLVED IN artery morphogenesis (ortholog); BMP signaling pathway (ortholog); cell population proliferation (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH DiGeorge syndrome (ortholog); syndromic microphthalmia 5 (ortholog); velocardiofacial syndrome (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog) 4 5555458 5565071 + 22301074 116898705 MODEL JAAIVD010000003;XM_032899982;XM_032899983;XM_032899984;XM_032899985;XM_032899986;XM_032899987;XM_032899988;XM_032899990 XP_032755873;XP_032755874;XP_032755875;XP_032755876;XP_032755877;XP_032755878;XP_032755879;XP_032755881 protein-coding 625957834 LOC116903935 uncharacterized protein C8orf34 homolog 1 146466377 146506908 + 116903935 MODEL JAAIVD010000025;XM_032906716 XP_032762607 protein-coding 625957841 Trnat-ugu transfer RNA threonine (anticodon UGU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 48067438 48067510 - 116910831 MODEL JAAIVD010000002 trna 625957842 Trnap-agg transfer RNA proline (anticodon AGG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 18 10536384 10536455 + 116887795 MODEL JAAIVD010000013 trna 625957843 Sap25 Sin3A associated protein 25 INVOLVED IN negative regulation of DNA-templated transcription (ortholog); FOUND IN nucleus (ortholog) 16 16382936 16384670 - 22301074;30032202 116885470 MODEL JAAIVD010000004;XM_032886751 XP_032742642 histone deacetylase complex subunit SAP25 protein-coding 625957851 Cebpz CCAAT enhancer binding protein zeta ENCODES a protein that exhibits DNA binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN CCAAT-binding factor complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 7 14296383 14313314 + 30032202 116905895 MODEL JAAIVD010000026;XM_032908884 XP_032764775 CCAAT/enhancer-binding protein zeta protein-coding 625957871 LOC116899890 small nucleolar RNA SNORA17 4 137023429 137023517 + 116899890 MODEL JAAIVD010000003 pseudo 625957872 Ndufs5 NADH:ubiquinone oxidoreductase subunit S5 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) 1 34563380 34568949 + 30032202 116896974 MODEL JAAIVD010000025;XM_032898558;XM_032898567;XM_032898576 XP_032754449;XP_032754458;XP_032754467 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 protein-coding 625957885 LOC116889374 high mobility group protein B4-like X 82603287 82603793 + 30032202 116889374 MODEL JAAIVD010000014;XM_032890476 XP_032746367 protein-coding 625957888 Dppa5 developmental pluripotency associated 5 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN regulation of gene expression (ortholog); ASSOCIATED WITH Hirschsprung's disease (ortholog); FOUND IN cytoplasm (ortholog) 8 72541709 72542767 - 30032202 116908121 MODEL JAAIVD010000027;XM_032911412 XP_032767303 developmental pluripotency-associated 5 protein protein-coding 625957895 Nudt12 nudix hydrolase 12 ENCODES a protein that exhibits magnesium ion binding (ortholog); NAD+ diphosphatase activity (ortholog); NADH pyrophosphatase activity (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); mRNA catabolic process (ortholog); mRNA methylguanosine-cap decapping (ortholog); PARTICIPATES IN niacin metabolic pathway; FOUND IN cytoplasm (ortholog); nucleus (ortholog); peroxisome (ortholog) 4 169158155 169171058 - 22301074;30032202 116899687 MODEL JAAIVD010000003;XM_032901710 XP_032757601 peroxisomal NADH pyrophosphatase NUDT12 protein-coding 625957906 LOC116906957 peflin-like 1 157840029 157841643 - 116906957 MODEL JAAIVD010000025 pseudo 625957907 Rps6 ribosomal protein S6 ENCODES a protein that exhibits mRNA binding (ortholog); protein kinase binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN activation-induced cell death of T cells (ortholog); cellular response to ethanol (ortholog); cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Disease Progression (ortholog); Experimental Autoimmune Myocarditis (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog) 1 67163112 67166026 + 22301074;30032202 116900471 MODEL JAAIVD010000025;XM_032902210 XP_032758101 40S ribosomal protein S6 protein-coding 625957916 Trnar-ucu transfer RNA arginine (anticodon UCU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 37555043 37555127 + 116897663 MODEL JAAIVD010000012 trna 625957917 LOC116914159 U2 spliceosomal RNA 12 33267569 33267712 - 116914159 MODEL JAAIVD010000007 pseudo 625957918 LOC116914859 proteasome subunit alpha type-5-like 13 40238113 40238682 - 116914859 MODEL JAAIVD010000008 pseudo 625957919 Cpeb4 cytoplasmic polyadenylation element binding protein 4 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to decreased oxygen levels (ortholog); cellular response to glucose starvation (ortholog); ASSOCIATED WITH liver cirrhosis (ortholog); portal hypertension (ortholog); primary biliary cholangitis (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); endoplasmic reticulum (ortholog) 9 4000613 4063221 - 30032202 116909206 MODEL JAAIVD010000002;XM_032912702;XM_032912703;XM_032912704;XM_032912705 XP_032768593;XP_032768594;XP_032768595;XP_032768596 cytoplasmic polyadenylation element-binding protein 4 protein-coding 625957936 LOC116885002 H/ACA ribonucleoprotein complex subunit 2-like 15 78676389 78676834 + 116885002 MODEL JAAIVD010000010 pseudo 625957937 Nbas NBAS subunit of NRZ tethering complex ENCODES a protein that exhibits SNARE binding (ortholog); INVOLVED IN negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); nuclear-transcribed mRNA catabolic process (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); Disease Progression (ortholog); fundus dystrophy (ortholog); FOUND IN Dsl1/NZR complex (ortholog); endoplasmic reticulum (ortholog) 7 33214134 33582027 + 22301074;30032202 116904887 MODEL JAAIVD010000026;XM_032907488 XP_032763379 neuroblastoma-amplified sequence protein-coding 625957994 LOC116909314 tropomyosin alpha-1 chain-like 9 22772425 22773242 - 116909314 MODEL JAAIVD010000002 pseudo 625957995 LOC116883356 histone H2B type 1-K 14 41649808 41650248 - 22301074;30032202 116883356 MODEL JAAIVD010000009;XM_032884435 XP_032740326 protein-coding 625958000 Cep97 centrosomal protein 97 INVOLVED IN negative regulation of cilium assembly (ortholog); regulation of mitotic spindle assembly (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); protein-containing complex (ortholog) 4 40043609 40071007 - 22301074 116898896 MODEL JAAIVD010000003;XM_032900293;XM_032900294 XP_032756184;XP_032756185 centrosomal protein of 97 kDa protein-coding 625958020 LOC116905493 uncharacterized LOC116905493 1 154902218 154903861 + 116905493 MODEL JAAIVD010000025;XR_004388545 ncrna 625958024 Gjb4 gap junction protein beta 4 ENCODES a protein that exhibits gap junction channel activity (ortholog); INVOLVED IN cell-cell signaling (ortholog); gap junction-mediated intercellular transport (ortholog); olfactory behavior (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 3A (ortholog); autosomal recessive nonsyndromic deafness 1A (ortholog); epidermolytic hyperkeratosis (ortholog); FOUND IN cell junction (ortholog); connexin complex (ortholog); plasma membrane (ortholog) 1 30929631 30931470 + 22301074;30032202 116886958 MODEL JAAIVD010000025;XM_032888456 XP_032744347 gap junction beta-4 protein protein-coding 625958029 LOC116906317 U6 spliceosomal RNA 7 41833429 41833535 - 116906317 MODEL JAAIVD010000026;XR_004388605 snrna 625958032 LOC116899859 U1 spliceosomal RNA 4 158055823 158055990 + 116899859 MODEL JAAIVD010000003;XR_004387854 snrna 625958035 LOC116913348 uncharacterized LOC116913348 12 56183034 56184830 - 116913348 MODEL JAAIVD010000007;XR_004389610 ncrna 625958040 B3gnt7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN keratan sulfate proteoglycan biosynthetic process (ortholog) 4 158448051 158452037 + 22301074;30032202 116899588 MODEL JAAIVD010000003;XM_032901529 XP_032757420 protein-coding 625958046 Trnak-cuu transfer RNA lysine (anticodon CUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 12 57720357 57720429 - 116914208 MODEL JAAIVD010000007 trna 625958047 Pdia5 protein disulfide isomerase family A member 5 ENCODES a protein that exhibits protein disulfide isomerase activity (ortholog); protein-disulfide reductase activity (ortholog); INVOLVED IN protein folding (ortholog); ASSOCIATED WITH COVID-19 (ortholog) 4 20184542 20270188 - 22301074;30032202 116898808 MODEL JAAIVD010000003;XM_032900160 XP_032756051 protein disulfide-isomerase A5 protein-coding 625958068 Pnpla3 patatin like domain 3, 1-acylglycerol-3-phosphate O-acyltransferase ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); A2-type glycerophospholipase activity (ortholog); diolein transacylation activity (ortholog); INVOLVED IN cellular response to 3,3',5-triiodo-L-thyronine (ortholog); cellular response to insulin stimulus (ortholog); glycerophospholipid metabolic process (ortholog); ASSOCIATED WITH alcohol-associated liver disease (ortholog); alcoholic liver cirrhosis (ortholog); coronary artery disease (ortholog); FOUND IN lipid droplet (ortholog); membrane (ortholog) 1 253556033 253575213 + 22301074;30032202 116914506 MODEL JAAIVD010000025;XM_032918833;XM_032918841 XP_032774724;XP_032774732 1-acylglycerol-3-phosphate O-acyltransferase PNPLA3;patatin like phospholipase domain containing 3 protein-coding 625958083 LOC116893946 PDZ domain-containing protein 11-like 2 93076454 93076870 - 116893946 MODEL JAAIVD010000001 pseudo 625958084 Hdx highly divergent homeobox X 67716381 67767821 + 22301074 116887975 MODEL JAAIVD010000014;XM_032889414 XP_032745305 protein-coding 625958092 LOC116888267 uncharacterized LOC116888267 X 66032722 66034976 - 116888267 MODEL JAAIVD010000014;XR_004386295 ncrna 625958096 LOC116896196 guanylate-binding protein 4 3 18244645 18257079 - 22301074;30032202 116896196 MODEL JAAIVD010000012;XM_032897243 XP_032753134 protein-coding 625958110 Elfn1 extracellular leucine rich repeat and fibronectin type III domain containing 1 INVOLVED IN chemical synaptic transmission (ortholog); establishment of protein localization (ortholog); synapse assembly (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy (ortholog); FOUND IN axon terminus (ortholog); dendrite (ortholog); excitatory synapse (ortholog) 16 13216438 13219195 - 22301074;30032202 116885757 MODEL JAAIVD010000004;XM_032887073 XP_032742964 protein ELFN1 protein-coding 625958115 Mfsd11 major facilitator superfamily domain containing 11 INVOLVED IN response to food (ortholog); response to starvation (ortholog) 9 67208972 67227945 - 116910057 MODEL JAAIVD010000002;XM_032913863 XP_032769754 UNC93-like protein MFSD11 protein-coding 625958133 Sdhaf3 succinate dehydrogenase complex assembly factor 3 FOUND IN mitochondrion (ortholog) 6 131471059 131520945 + 30032202 116904088 MODEL JAAIVD010000024;XM_032906959 XP_032762850 succinate dehydrogenase assembly factor 3, mitochondrial protein-coding 625958139 Hspb9 heat shock protein family B (small) member 9 ASSOCIATED WITH Developmental Disabilities (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 9 60006009 60006798 + 30032202 116908963 MODEL JAAIVD010000002;XM_032912424 XP_032768315 heat shock protein beta-9 protein-coding 625958143 LOC116894858 U6 spliceosomal RNA 2 213692070 213692173 - 116894858 MODEL JAAIVD010000001;XR_004387072 snrna 625958146 LOC116896964 uncharacterized LOC116896964 3 122466523 122475125 - 116896964 MODEL JAAIVD010000012;XR_004387388 ncrna 625958151 Ca4 carbonic anhydrase 4 ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); INVOLVED IN bicarbonate transport (ortholog); response to steroid hormone (ortholog); response to xenobiotic stimulus (ortholog); ASSOCIATED WITH Colonic Neoplasms (ortholog); fundus dystrophy (ortholog); retinitis pigmentosa (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); brush border membrane (ortholog) 9 85738872 85754006 - 22301074;30032202 116909266 MODEL JAAIVD010000002;XM_032912792;XM_032912793 XP_032768683;XP_032768684 protein-coding 625958166 Gins4 GINS complex subunit 4 INVOLVED IN DNA replication (ortholog); inner cell mass cell proliferation (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 13 63189283 63200870 + 22301074;30032202 116914842 MODEL JAAIVD010000008;XM_032919296 XP_032775187 DNA replication complex GINS protein SLD5 protein-coding 625958178 LOC116884374 broad substrate specificity ATP-binding cassette transporter ABCG2-like 15 46219703 46220914 - 116884374 MODEL JAAIVD010000010 pseudo 625958179 Ankrd6 ankyrin repeat domain 6 INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); positive regulation of Wnt signaling pathway, planar cell polarity pathway (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 1 110087503 110230079 + 22301074;30032202 116902350 MODEL JAAIVD010000025;XM_032904838;XM_032904846 XP_032760729;XP_032760737 ankyrin repeat domain-containing protein 6 protein-coding 625958204 LOC116907088 protein FAM162A-like 8 79854595 79855110 + 116907088 MODEL JAAIVD010000027 pseudo 625958205 LOC116912923 uncharacterized LOC116912923 1 248451373 248457984 - 22301074 116912923 MODEL JAAIVD010000025;XM_032917178 XP_032773069 uncharacterized protein LOC116912923 protein-coding 625958224 LOC116908414 small nucleolar RNA SNORA17 8 95796078 95796194 - 116908414 MODEL JAAIVD010000027 pseudo 625958225 LOC116886863 olfactory receptor 11A1 18 10175166 10176107 + 22301074 116886863 MODEL JAAIVD010000013;XM_032888318 XP_032744209 protein-coding 625958228 LOC116907524 cytochrome b561 domain-containing protein 2 ENCODES a protein that exhibits heme binding (ortholog); transmembrane ascorbate ferrireductase activity (ortholog); transmembrane monodehydroascorbate reductase activity (ortholog); INVOLVED IN ascorbate homeostasis (ortholog); FOUND IN endoplasmic reticulum (ortholog); vesicle (ortholog) 8 98855719 98858277 - 30032202 116907524 MODEL JAAIVD010000027;XM_032910534;XM_032910535;XM_032910536 XP_032766425;XP_032766426;XP_032766427 protein-coding 625958241 Rhbdl1 rhomboid like 1 9 3099986 3104095 - 22301074;30032202 116908549 MODEL JAAIVD010000002;XM_032911749;XM_032911750;XM_032911751 XP_032767640;XP_032767641;XP_032767642 rhomboid-related protein 1 protein-coding 625958258 Trim68 tripartite motif containing 68 ENCODES a protein that exhibits histone acetyltransferase binding (ortholog); identical protein binding (ortholog); nuclear androgen receptor binding (ortholog); INVOLVED IN protein autoubiquitination (ortholog); regulation of androgen receptor signaling pathway (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 2 102624649 102631512 - 22301074 116891805 MODEL JAAIVD010000001;XM_032893161;XM_032893162 XP_032749052;XP_032749053 E3 ubiquitin-protein ligase TRIM68 protein-coding 625958270 LOC116905470 uncharacterized LOC116905470 7 127316995 127318749 + 116905470 MODEL JAAIVD010000026;XR_004388541 ncrna 625958275 LOC116914080 A-kinase-interacting protein 1-like 12 28518647 28519288 + 116914080 MODEL JAAIVD010000007 pseudo 625958276 Fgf4 fibroblast growth factor 4 INVOLVED IN apoptotic process involved in morphogenesis (ortholog); cartilage condensation (ortholog); cellular response to leukemia inhibitory factor (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); hepatocellular carcinoma (ortholog); Pilonidal Sinus (ortholog) 2 4871393 4872778 - 22301074;30032202 116893610 MODEL JAAIVD010000001;XM_032895317 XP_032751208 protein-coding 625958281 LOC116883263 zinc finger protein 525-like 14 76817845 76819342 + 116883263 MODEL JAAIVD010000009 pseudo 625958282 Trnaq-cug transfer RNA glutamine (anticodon CUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 8 59046687 59046758 + 116908469 MODEL JAAIVD010000027 trna 625958283 LOC116900364 olfactory receptor 5W2-like 5 69374131 69375088 - 116900364 MODEL JAAIVD010000023 pseudo 625958284 LOC116900495 olfactory receptor 4A15-like 5 71887588 71888511 - 22301074 116900495 MODEL JAAIVD010000023;XM_032902229 XP_032758120 protein-coding 625958287 Lars2 leucyl-tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits leucine-tRNA ligase activity (ortholog); INVOLVED IN leucyl-tRNA aminoacylation (ortholog); ASSOCIATED WITH genetic disease (ortholog); HYDROPS, LACTIC ACIDOSIS, AND SIDEROBLASTIC ANEMIA (ortholog); mitochondrial myopathy (ortholog); FOUND IN mitochondrion (ortholog) 8 114486218 114579468 + 22301074;30032202 116908025 MODEL JAAIVD010000027;XM_032911289 XP_032767180 probable leucine--tRNA ligase, mitochondrial protein-coding 625958312 Ube2j2 ubiquitin conjugating enzyme E2 J2 ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN ERAD pathway (ortholog); positive regulation of protein localization to mitochondrion (ortholog); protein K6-linked ubiquitination (ortholog); FOUND IN endoplasmic reticulum (ortholog); ubiquitin ligase complex (ortholog) 1 4692030 4705923 - 116891630 MODEL JAAIVD010000025;XM_032892847;XM_032892854;XM_032892861;XM_032892872;XM_032892881 XP_032748738;XP_032748745;XP_032748752;XP_032748763;XP_032748772 ubiquitin-conjugating enzyme E2 J2 protein-coding 625958332 Sdf2 stromal cell derived factor 2 ENCODES a protein that exhibits misfolded protein binding (ortholog); INVOLVED IN protein refolding (ortholog); FOUND IN endoplasmic reticulum (ortholog); protein folding chaperone complex (ortholog) 9 92183243 92193668 - 116909950 MODEL JAAIVD010000002;XM_032913725 XP_032769616 stromal cell-derived factor 2 protein-coding 625958339 LOC116905673 mortality factor 4-like protein 1 7 14125619 14126592 - 116905673 MODEL JAAIVD010000026 pseudo 625958340 Dars1 aspartyl-tRNA synthetase 1 ENCODES a protein that exhibits aspartate-tRNA ligase activity (ortholog); INVOLVED IN aspartyl-tRNA aminoacylation (ortholog); PARTICIPATES IN Canavan disease pathway; ASSOCIATED WITH genetic disease (ortholog); Hypomyelination with Brainstem and Spinal Cord Involvement and Leg Spasticity (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 10 7303812 7353830 + 22301074;30032202 116911073 MODEL JAAIVD010000005;XM_032914853 XP_032770744 aspartate--tRNA ligase, cytoplasmic protein-coding 625958360 LOC116893166 olfactory receptor 52R1-like 2 102778648 102779295 - 22301074 116893166 MODEL JAAIVD010000001;XM_032895078 XP_032750969 protein-coding 625958363 LOC116905672 60S ribosomal protein L11-like 7 35969171 35969704 + 116905672 MODEL JAAIVD010000026 pseudo 625958364 Dcaf13 DDB1 and CUL4 associated factor 13 ENCODES a protein that exhibits nuclear estrogen receptor binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN decidualization (ortholog); epigenetic programming in the zygotic pronuclei (ortholog); oocyte growth (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); nucleolus (ortholog) 1 212033114 212066767 - 22301074;30032202 116910809 MODEL JAAIVD010000025;XM_032914590 XP_032770481 DDB1- and CUL4-associated factor 13 protein-coding 625958379 Rpn2 ribophorin II ENCODES a protein that exhibits ribosome binding (ortholog); INVOLVED IN glycoprotein biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); response to xenobiotic stimulus (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); Prostatic Neoplasms (ortholog); FOUND IN autophagosome membrane (ortholog); endoplasmic reticulum (ortholog); oligosaccharyltransferase complex (ortholog) 5 136623727 136669733 + 22301074;30032202 116902222 MODEL JAAIVD010000023;XM_032904625;XM_032904626 XP_032760516;XP_032760517 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 protein-coding 625958402 LOC116905804 ornithine decarboxylase-like 7 94652469 94653483 + 116905804 MODEL JAAIVD010000026 pseudo 625958403 LOC116885036 small nucleolar RNA SNORA48 15 39579161 39579299 - 116885036 MODEL JAAIVD010000010;XR_004385923 snorna 625958406 Rassf1 Ras association domain family member 1 ENCODES a protein that exhibits identical protein binding (ortholog); small GTPase binding (ortholog); INVOLVED IN DNA damage response (ortholog); positive regulation of protein ubiquitination (ortholog); protein stabilization (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Animal Mammary Neoplasms (ortholog); bladder disease (ortholog); FOUND IN microtubule cytoskeleton (ortholog); nucleus (ortholog) 8 98867653 98878939 + 30032202 116907527 MODEL JAAIVD010000027;XM_032910540;XM_032910541;XM_032910542 XP_032766431;XP_032766432;XP_032766433 ras association domain-containing protein 1 protein-coding 625958422 LOC116895271 small proline-rich protein 2H 3 1680097 1680381 - 22301074 116895271 MODEL JAAIVD010000012;XM_032896589 XP_032752480 protein-coding 625958425 Dera deoxyribose-phosphate aldolase ENCODES a protein that exhibits deoxyribose-phosphate aldolase activity (ortholog); INVOLVED IN 2'-deoxyribonucleoside catabolic process (ortholog); PARTICIPATES IN pentose phosphate pathway; ribose 5-phosphate isomerase deficiency pathway; transaldolase deficiency pathway; ASSOCIATED WITH COVID-19 (ortholog); FOUND IN nucleoplasm (ortholog) 6 11603045 11682011 - 22301074;30032202 116903143 MODEL JAAIVD010000024;XM_032905507 XP_032761398 protein-coding 625958438 Ssc4d scavenger receptor cysteine rich family member with 4 domains 16 18048195 18059269 + 22301074 116885723 MODEL JAAIVD010000004;XM_032887031 XP_032742922 scavenger receptor cysteine-rich domain-containing group B protein protein-coding 625958452 LOC116891653 uncharacterized LOC116891653 2 90258832 90276230 - 116891653 MODEL JAAIVD010000001;XR_004386854 ncrna 625958457 LOC116888072 ubiquitin-like protein FUBI X 89804618 89805854 + 116888072 MODEL JAAIVD010000014 pseudo 625958458 LOC116884756 glyceraldehyde-3-phosphate dehydrogenase-like 15 64380069 64381079 + 116884756 MODEL JAAIVD010000010 pseudo 625958459 Mks1 MKS transition zone complex subunit 1 INVOLVED IN branching morphogenesis of an epithelial tube (ortholog); cilium assembly (ortholog); common bile duct development (ortholog); ASSOCIATED WITH atrioventricular septal defect (ortholog); Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 13 (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 9 82933909 82944911 - 30032202 116909906 MODEL JAAIVD010000002;XM_032913658;XM_032913659;XM_032913660 XP_032769549;XP_032769550;XP_032769551 Meckel syndrome type 1 protein protein-coding 625958487 Rnf13 ring finger protein 13 ENCODES a protein that exhibits JUN kinase binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN positive regulation of JNK cascade (ortholog); protein autoubiquitination (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 73 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endosome (ortholog); late endosome membrane (ortholog) 3 96312552 96417838 + 30032202 116896848 MODEL JAAIVD010000012;XM_032898353 XP_032754244 E3 ubiquitin-protein ligase RNF13 protein-coding 625958501 Ppcdc phosphopantothenoylcysteine decarboxylase ENCODES a protein that exhibits FMN binding (ortholog); identical protein binding (ortholog); phosphopantothenoylcysteine decarboxylase activity (ortholog); INVOLVED IN coenzyme A biosynthetic process (ortholog); PARTICIPATES IN pantothenic acid metabolic pathway 8 51304717 51326795 - 30032202 116907679 MODEL JAAIVD010000027;XM_032910774;XM_032910775 XP_032766665;XP_032766666 protein-coding 625958514 LOC116894033 olfactory receptor 51E1-like 2 102097664 102098605 - 22301074 116894033 MODEL JAAIVD010000001;XM_032895752 XP_032751643 protein-coding 625958517 LOC116900979 immunoglobulin kappa variable 4-1-like 5 108989534 108990238 + 116900979 MODEL JAAIVD010000023 pseudo 625958518 Nexn nexilin F-actin binding protein ENCODES a protein that exhibits actin filament binding (ortholog); structural constituent of muscle (ortholog); INVOLVED IN regulation of cell migration (ortholog); regulation of cytoskeleton organization (ortholog); response to bacterium (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); congestive heart failure (ortholog); dilated cardiomyopathy (ortholog); FOUND IN actin cytoskeleton (ortholog); cell-substrate junction (ortholog); focal adhesion (ortholog) 3 9345144 9375263 + 30032202 116896157 MODEL JAAIVD010000012;XM_032897148;XM_032897149 XP_032753039;XP_032753040 nexilin protein-coding 625958541 LOC116893538 DNA replication ATP-dependent helicase/nuclease DNA2-like 2 203503521 203505037 + 116893538 MODEL JAAIVD010000001 pseudo 625958542 Rtn4rl1 reticulon 4 receptor like 1 ENCODES a protein that exhibits chondroitin sulfate binding (ortholog); heparin binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN corpus callosum development (ortholog); negative regulation of axon regeneration (ortholog); negative regulation of neuron projection development (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) 9 93916167 93989452 + 22301074;30032202 116908856 MODEL JAAIVD010000002;XM_032912294 XP_032768185 reticulon-4 receptor-like 1 protein-coding 625958548 Tanc1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 INVOLVED IN dendritic spine maintenance (ortholog); myoblast fusion (ortholog); regulation of postsynapse organization (ortholog); ASSOCIATED WITH intellectual disability (ortholog); FOUND IN axon terminus (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) 5 37320953 37549568 + 22301074;30032202 116901435 MODEL JAAIVD010000023;XM_032903343 XP_032759234 protein TANC1 protein-coding 625958579 Tfam transcription factor A, mitochondrial ENCODES a protein that exhibits chromatin binding (ortholog); heat shock protein binding (ortholog); mitochondrial promoter sequence-specific DNA binding (ortholog); INVOLVED IN mitochondrial respiratory chain complex assembly (ortholog); mitochondrial transcription (ortholog); response to hypoxia (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); Animal Disease Models (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog); mitochondrion (ortholog) 18 15612499 15624707 + 30032202 116887138 MODEL JAAIVD010000013;XM_032888687 XP_032744578 protein-coding 625958590 LOC116906991 40S ribosomal protein S24-like 8 10896475 10896870 + 22301074;30032202 116906991 MODEL JAAIVD010000027;XM_032909918 XP_032765809 protein-coding 625958594 Mia3 MIA SH3 domain ER export factor 3 ENCODES a protein that exhibits cargo receptor activity (ortholog); INVOLVED IN cell migration involved in sprouting angiogenesis (ortholog); cellular response to oxidised low-density lipoprotein particle stimulus (ortholog); chondrocyte development (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); genetic disease (ortholog); myocardial infarction (ortholog); FOUND IN endoplasmic reticulum exit site (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) 10 61584768 61626991 - 22301074;30032202 116911043 MODEL JAAIVD010000005;XM_032914788;XM_032914789;XM_032914790;XM_032914792 XP_032770679;XP_032770680;XP_032770681;XP_032770683 transport and Golgi organization protein 1 homolog protein-coding 625958632 Metap1 methionyl aminopeptidase 1 ENCODES a protein that exhibits aminopeptidase activity (ortholog); INVOLVED IN platelet aggregation (ortholog); protein maturation (ortholog); ASSOCIATED WITH intellectual disability (ortholog) 3 20665811 20700810 + 22301074 116896207 MODEL JAAIVD010000012;XM_032897255 XP_032753146 methionine aminopeptidase 1 protein-coding 625958647 Kcna1 potassium voltage-gated channel subfamily A member 1 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); disordered domain specific binding (ortholog); voltage-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential (ortholog); INVOLVED IN axon development (ortholog); brain development (ortholog); cell communication by electrical coupling (ortholog); ASSOCIATED WITH epilepsy (ortholog); epilepsy with generalized tonic-clonic seizures (ortholog); episodic ataxia (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); axon initial segment (ortholog) 6 21259536 21265218 + 22301074;30032202;3191911 116903243 MODEL JAAIVD010000024;X12589;XM_032905621 CAA31102;XP_032761512 protein-coding 625958653 Madd MAP kinase activating death domain ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN anterograde synaptic vesicle transport (ortholog); execution phase of apoptosis (ortholog); negative regulation of apoptotic signaling pathway (ortholog); PARTICIPATES IN ceramide signaling pathway; tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); DEEAH Syndrome (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); plasma membrane (ortholog) 5 65305138 65350073 - 30032202 116901613 MODEL JAAIVD010000023;XM_032903657 XP_032759548 MAP kinase-activating death domain protein protein-coding 625958694 LOC116888400 ADP-ribosylation factor-like protein 13A X 79597130 79599696 - 116888400 MODEL JAAIVD010000014;XM_032889676 XP_032745567 protein-coding 625958702 Fbxl22 F-box and leucine rich repeat protein 22 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); FOUND IN SCF ubiquitin ligase complex (ortholog); Z disc (ortholog) 8 60871120 60875641 - 22301074 116908035 MODEL JAAIVD010000027;XM_032911306;XM_032911307 XP_032767197;XP_032767198 F-box and leucine-rich protein 22 protein-coding 625958712 Cryzl1 crystallin zeta like 1 ENCODES a protein that exhibits identical protein binding (ortholog); FOUND IN early endosome (ortholog) 4 52869073 52909098 + 22301074 116898990 MODEL JAAIVD010000003;XM_032900428;XM_032900429 XP_032756319;XP_032756320 quinone oxidoreductase-like protein 1 protein-coding 625958730 LOC116899792 U7 small nuclear RNA 4 88291981 88292043 + 116899792 MODEL JAAIVD010000003;XR_004387798 snrna 625958733 Hsf2 heat shock transcription factor 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); epilepsy (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 18 34170187 34198223 + 22301074 116886939 MODEL JAAIVD010000013;XM_032888435;XM_032888436;XM_032888437 XP_032744326;XP_032744327;XP_032744328 heat shock factor protein 2 protein-coding 625958756 LOC116888938 60S ribosomal protein L18-like X 1865239 1868103 - 116888938 MODEL JAAIVD010000014 pseudo 625958757 LOC116914822 nucleoside diphosphate kinase A-like 13 58052177 58052677 + 116914822 MODEL JAAIVD010000008 pseudo 625958758 Ifnar1 interferon alpha and beta receptor subunit 1 ENCODES a protein that exhibits cytokine binding (ortholog); interferon receptor activity (ortholog); JAK pathway signal transduction adaptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); cellular response to interferon-alpha (ortholog); cellular response to interferon-beta (ortholog); PARTICIPATES IN type I interferon signaling pathway; ASSOCIATED WITH bacterial pneumonia (ortholog); Cardiovirus Infections (ortholog); COVID-19 (ortholog); FOUND IN plasma membrane (ortholog) 4 53100433 53121963 - 22301074 116898994 MODEL JAAIVD010000003;XM_032900436 XP_032756327 interferon alpha/beta receptor 1 protein-coding 625958773 LOC116888113 heterogeneous nuclear ribonucleoprotein M-like X 101078662 101080715 - 116888113 MODEL JAAIVD010000014 pseudo 625958774 Nkpd1 NTPase KAP family P-loop domain containing 1 2 171100589 171108021 - 116892526 MODEL JAAIVD010000001;XM_032894282;XM_032894283;XM_032894284 XP_032750173;XP_032750174;XP_032750175 NTPase KAP family P-loop domain-containing protein 1 protein-coding 625958787 LOC116904101 neurabin-1 6 133693013 133697153 - 30032202 116904101 MODEL JAAIVD010000024;XM_032906969 XP_032762860 protein-coding 625958794 LOC116900282 olfactory receptor 8K3-like 5 63507629 63508588 - 22301074;30032202 116900282 MODEL JAAIVD010000023;XM_032902036 XP_032757927 protein-coding 625958797 Trnag-gcc transfer RNA glycine (anticodon GCC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 5 35078528 35078598 - 116902672 MODEL JAAIVD010000023 trna 625958798 LOC116894615 vomeronasal type-2 receptor 116-like 2 185692853 185705033 + 22301074;30032202 116894615 MODEL JAAIVD010000001;XM_032896329 XP_032752220 protein-coding 625958806 Mast1 microtubule associated serine/threonine kinase 1 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN brain development (ortholog); cytoskeleton organization (ortholog); ASSOCIATED WITH female breast cancer (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN membrane (ortholog); neuron projection (ortholog); neuronal cell body (ortholog) 17 15350550 15377545 + 22301074;30032202 116886223 MODEL JAAIVD010000011;XM_032887615 XP_032743506 microtubule-associated serine/threonine-protein kinase 1 protein-coding 625958836 LOC116900573 olfactory receptor 4F3/4F16/4F29-like 5 90297736 90305201 - 22301074 116900573 MODEL JAAIVD010000023;XM_032902296;XM_032902297 XP_032758187;XP_032758188 protein-coding 625958845 Ppp1r3e protein phosphatase 1 regulatory subunit 3E ENCODES a protein that exhibits [phosphorylase] phosphatase activity (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN positive regulation of glycogen biosynthetic process (ortholog); regulation of glycogen biosynthetic process (ortholog); regulation of glycogen catabolic process (ortholog); PARTICIPATES IN glycogen biosynthetic pathway; glycogen degradation pathway; FOUND IN glycogen granule (ortholog) 12 70116398 70117633 + 30032202 116913941 MODEL JAAIVD010000007;XM_032918207 XP_032774098 protein-coding 625958851 LOC116890598 small nucleolar RNA SNORA17 1 80525576 80525691 + 116890598 MODEL JAAIVD010000025 pseudo 625958852 LOC116902759 perilipin-3-like 6 65375960 65377227 + 116902759 MODEL JAAIVD010000024 pseudo 625958853 Sar1b secretion associated Ras related GTPase 1B ENCODES a protein that exhibits amino acid sensor activity (ortholog); G protein activity (ortholog); INVOLVED IN cellular response to leucine starvation (ortholog); COPII vesicle coating (ortholog); COPII-coated vesicle cargo loading (ortholog); ASSOCIATED WITH chylomicron retention disease (ortholog); genetic disease (ortholog); Hereditary Pancreatitis (ortholog); FOUND IN COPII vesicle coat (ortholog); cytosol (ortholog); endoplasmic reticulum exit site (ortholog) 9 34351754 34380524 + 22301074;30032202 116910250 MODEL JAAIVD010000002;XM_032914141 XP_032770032 GTP-binding protein SAR1b protein-coding 625958864 Mrpl10 mitochondrial ribosomal protein L10 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 9 57339781 57347222 - 30032202 116909673 MODEL JAAIVD010000002;XM_032913328 XP_032769219 39S ribosomal protein L10, mitochondrial protein-coding 625958873 Yrdc yrdC N6-threonylcarbamoyltransferase domain containing ENCODES a protein that exhibits L-threonylcarbamoyladenylate synthase activity (ortholog); INVOLVED IN negative regulation of transport (ortholog); tRNA threonylcarbamoyladenosine modification (ortholog); ASSOCIATED WITH Galloway-Mowat Syndrome 10 (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); mitochondrion (ortholog) 1 33441036 33445461 - 22301074;30032202 116896864 MODEL JAAIVD010000025;XM_032898392 XP_032754283 yrdC domain-containing protein, mitochondrial protein-coding 625958882 Rufy3 RUN and FYVE domain containing 3 ENCODES a protein that exhibits dynactin binding (ortholog); INVOLVED IN actin filament organization (ortholog); negative regulation of axonogenesis (ortholog); positive regulation of axon extension (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); skin disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) 11 2055531 2139481 + 22301074;30032202 116912760 MODEL JAAIVD010000006;XM_032916909;XM_032916910 XP_032772800;XP_032772801 protein RUFY3 protein-coding 625958909 LOC116886067 olfactory receptor 6C1-like 1 215103134 215104083 - 22301074;30032202 116886067 MODEL JAAIVD010000025;XM_032887419 XP_032743310 protein-coding 625958912 LOC116888427 uncharacterized LOC116888427 X 58352401 58353554 - 116888427 MODEL JAAIVD010000014;XR_004386311 ncrna 625958917 LOC116897653 small nucleolar RNA U3 3 110836046 110836167 - 116897653 MODEL JAAIVD010000012 pseudo 625958918 LOC116905588 ubiquitin-conjugating enzyme E2 S-like 7 4265388 4266697 + 116905588 MODEL JAAIVD010000026 pseudo 625958919 Uvrag UV radiation resistance associated ENCODES a protein that exhibits SH3 domain binding (ortholog); SNARE binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); centrosome cycle (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH prostate cancer (ortholog); FOUND IN autophagosome membrane (ortholog); centrosome (ortholog); DNA-dependent protein kinase complex (ortholog) 2 97160014 97417614 - 30032202 116891717 MODEL JAAIVD010000001;XM_032893006 XP_032748897 UV radiation resistance-associated gene protein protein-coding 625958938 Nf1 neurofibromin 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); microtubule binding (ortholog); phosphatidylcholine binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); adrenal gland development (ortholog); amygdala development (ortholog); PARTICIPATES IN forkhead class A signaling pathway; syndecan signaling pathway; ASSOCIATED WITH acute monocytic leukemia (ortholog); acute myeloid leukemia (ortholog); adenoma (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendrite (ortholog) 9 90861073 91091922 - 22301074 116908512 MODEL JAAIVD010000002;XM_032911686;XM_032911687 XP_032767577;XP_032767578 neurofibromin protein-coding 625959003 LOC116888087 methionine aminopeptidase 2-like X 93465344 93466735 - 116888087 MODEL JAAIVD010000014 pseudo 625959004 Ift56 intraflagellar transport 56 ENCODES a protein that exhibits intraciliary transport particle B binding (ortholog); INVOLVED IN axoneme assembly (ortholog); cilium assembly (ortholog); intraciliary transport (ortholog); ASSOCIATED WITH BILIARY, RENAL, NEUROLOGIC, AND SKELETAL SYNDROME (ortholog); Caroli disease (ortholog); hydrocephalus (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cilium (ortholog) 6 101387336 101442658 - 22301074;30032202 116903948 MODEL JAAIVD010000024;XM_032906734;XM_032906735;XR_004388314 XP_032762625;XP_032762626 Ttc26 intraflagellar transport protein 56;tetratricopeptide repeat domain 26 protein-coding 625959030 Adrb2 adrenoceptor beta 2 ENCODES a protein that exhibits adenylate cyclase binding (ortholog); amyloid-beta binding (ortholog); B2 bradykinin receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting adrenergic receptor signaling pathway (ortholog); PARTICIPATES IN adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; epinephrine signaling pathway via adrenergic receptor beta; G protein mediated signaling pathway via Galphai family; ASSOCIATED WITH acute kidney failure (ortholog); AIDS Dementia Complex (ortholog); Angina Pectoris (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); caveola (ortholog) 15 69768706 69770962 + 22301074;30032202 116884504 MODEL JAAIVD010000010;XM_032885634 XP_032741525 beta-2 adrenergic receptor protein-coding 625959035 LOC116893733 uncharacterized LOC116893733 2 15948264 15962470 - 116893733 MODEL JAAIVD010000001;XR_004387001 ncrna 625959040 LOC116896965 U6 snRNA-associated Sm-like protein LSm5 3 122479731 122480218 - 22301074;30032202 116896965 MODEL JAAIVD010000012;XM_032898542 XP_032754433 protein-coding 625959045 Pdia2 protein disulfide isomerase family A member 2 ENCODES a protein that exhibits protein-disulfide reductase activity (ortholog); INVOLVED IN platelet aggregation (ortholog); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway 9 3456181 3459282 - 22301074;30032202 116910557 MODEL JAAIVD010000002;XM_032914468;XM_032914469 XP_032770359;XP_032770360 protein disulfide-isomerase A2 protein-coding 625959062 LOC116905951 14-3-3 protein sigma-like 7 20729058 20729954 - 30032202 116905951 MODEL JAAIVD010000026;XM_032908952 XP_032764843 protein-coding 625959067 LOC116896494 uncharacterized LOC116896494 3 60405299 60407283 + 116896494 MODEL JAAIVD010000012;XR_004387340 ncrna 625959071 LOC116913522 40S ribosomal protein S12-like 12 75210404 75210890 + 22301074;30032202 116913522 MODEL JAAIVD010000007;XM_032917724 XP_032773615 protein-coding 625959076 LOC116914968 60S ribosomal protein L21-like 13 43402771 43403253 - 22301074;30032202 116914968 MODEL JAAIVD010000008;XM_032919378 XP_032775269 protein-coding 625959079 Erich4 glutamate rich 4 2 169177862 169179207 + 116892456 MODEL JAAIVD010000001;XM_032894171 XP_032750062 glutamate-rich protein 4 protein-coding 625959085 LOC116887527 sodium-dependent glucose transporter 1B 18 39737071 39744980 - 22301074 116887527 MODEL JAAIVD010000013;XM_032889157 XP_032745048 protein-coding 625959093 LOC116895338 glyceraldehyde-3-phosphate dehydrogenase-like 3 40262307 40263302 - 116895338 MODEL JAAIVD010000012 pseudo 625959094 Mapk1 mitogen-activated protein kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); double-stranded DNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); B cell receptor signaling pathway (ortholog); Bergmann glial cell differentiation (ortholog); PARTICIPATES IN adenosine signaling pathway; Bone morphogenetic proteins signaling pathway; ceramide signaling pathway; ASSOCIATED WITH Aberrant Crypt Foci (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN axon (ortholog); caveola (ortholog); cytoplasm (ortholog) 4 2258527 2323147 + 22301074;30032202 116898621 MODEL JAAIVD010000003;XM_032899830;XM_032899832;XM_032899833 XP_032755721;XP_032755723;XP_032755724 protein-coding 625959112 Rac3 Rac family small GTPase 3 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); GTPase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cerebral cortex GABAergic interneuron development (ortholog); homeostasis of number of cells within a tissue (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); genetic disease (ortholog); FOUND IN cell periphery (ortholog); endomembrane system (ortholog); filamentous actin (ortholog) 9 63294366 63297278 - 22301074;30032202 116909849 MODEL JAAIVD010000002;XM_032913574;XM_032913575 XP_032769465;XP_032769466 ras-related C3 botulinum toxin substrate 3 protein-coding 625959125 Neurl4 neuralized E3 ubiquitin protein ligase 4 ENCODES a protein that exhibits DNA binding (ortholog); NAD+-dinitrogen-reductase ADP-D-ribosyltransferase activity (ortholog); INVOLVED IN mitochondrial DNA repair (ortholog); spermatogenesis (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 9 49511452 49523337 + 30032202 116908503 MODEL JAAIVD010000002;XM_032911673;XM_032911674;XM_032911675 XP_032767564;XP_032767565;XP_032767566 neuralized-like protein 4 protein-coding 625959161 Fan1 FANCD2 and FANCI associated nuclease 1 ENCODES a protein that exhibits 5'-3' exonuclease activity (ortholog); 5'-flap endonuclease activity (ortholog); flap-structured DNA binding (ortholog); INVOLVED IN DNA repair (ortholog); double-strand break repair via homologous recombination (ortholog); interstrand cross-link repair (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); genetic disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 2 136035002 136061697 + 30032202 116892010 MODEL JAAIVD010000001;XM_032893471 XP_032749362 fanconi-associated nuclease 1 protein-coding 625959179 LOC116889914 60S ribosomal protein L29-like 1 246660025 246660877 - 116889914 MODEL JAAIVD010000025 pseudo 625959180 Sike1 suppressor of IKBKE 1 ENCODES a protein that exhibits protein kinase binding (ortholog); protein-macromolecule adaptor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN negative regulation of hippo signaling (ortholog); FOUND IN FAR/SIN/STRIPAK complex (ortholog) 3 55035745 55043471 - 116896454 MODEL JAAIVD010000012;XM_032897611 XP_032753502 protein-coding 625959189 LOC116900179 glyceraldehyde-3-phosphate dehydrogenase-like 5 34553935 34554935 + 22301074;30032202 116900179 MODEL JAAIVD010000023;XM_032901934 XP_032757825 protein-coding 625959193 Fgf5 fibroblast growth factor 5 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); growth factor activity (ortholog); INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); glial cell differentiation (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); familial isolated trichomegaly (ortholog) 11 8512917 8533674 + 22301074;30032202 116912575 MODEL JAAIVD010000006;XM_032916690;XM_032916691 XP_032772581;XP_032772582 protein-coding 625959202 LOC116914708 mannose-binding protein A 13 19672585 19678692 + 30032202 116914708 MODEL JAAIVD010000008;XM_032919137;XM_032919138 XP_032775028;XP_032775029 protein-coding 625959216 Hyou1 hypoxia up-regulated 1 ENCODES a protein that exhibits ATP binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway; ASSOCIATED WITH immunodeficiency 59 (ortholog); spinocerebellar ataxia 17 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum chaperone complex (ortholog); smooth endoplasmic reticulum (ortholog) 8 38926722 38938845 + 22301074;30032202 116906860 MODEL JAAIVD010000027;XM_032909760;XM_032909761;XM_032909762;XM_032909763 XP_032765651;XP_032765652;XP_032765653;XP_032765654 hypoxia up-regulated protein 1 protein-coding 625959254 LOC116893917 heterogeneous nuclear ribonucleoprotein A1-like 2 81263814 81264800 + 116893917 MODEL JAAIVD010000001 pseudo 625959255 Bhlha9 basic helix-loop-helix family member a9 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); ASSOCIATED WITH Complex Camptosynpolydactyly (ortholog); genetic disease (ortholog); Mesoaxial Synostotic Syndactyly with Phalangeal Reduction (ortholog); FOUND IN cytoplasm (ortholog) 9 95364578 95365700 + 22301074;30032202 116910131 MODEL JAAIVD010000002;XM_032913966 XP_032769857 class A basic helix-loop-helix protein 9 protein-coding 625959259 LOC116902843 GTPase IMAP family member 9-like 6 92293318 92294414 - 22301074 116902843 MODEL JAAIVD010000024;XM_032905173 XP_032761064 protein-coding 625959264 LOC116888489 olfactory receptor 2K2 1 92866798 92869406 + 22301074 116888489 MODEL JAAIVD010000025;XM_032889766 XP_032745657 protein-coding 625959269 Rp2 RP2 activator of ARL3 GTPase ENCODES a protein that exhibits GTPase activator activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN post-chaperonin tubulin folding pathway (ortholog); post-Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH Eye Abnormalities (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) X 1184467 1205808 - 30032202 116888936 MODEL JAAIVD010000014;XM_032890174 XP_032746065 protein XRP2 protein-coding 625959277 Mrrf mitochondrial ribosome recycling factor INVOLVED IN ribosome disassembly (ortholog); ASSOCIATED WITH myoepithelioma (ortholog); FOUND IN mitochondrion (ortholog) 5 13287001 13339194 - 30032202 116901340 MODEL JAAIVD010000023;XM_032903170;XM_032903171 XP_032759061;XP_032759062 ribosome-recycling factor, mitochondrial protein-coding 625959290 Kif23 kinesin family member 23 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN mitotic cytokinesis (ortholog); mitotic spindle midzone assembly (ortholog); positive regulation of cytokinesis (ortholog); ASSOCIATED WITH congenital dyserythropoietic anemia (ortholog); congenital dyserythropoietic anemia type IIIa (ortholog); COVID-19 (ortholog); FOUND IN centralspindlin complex (ortholog); centrosome (ortholog); Flemming body (ortholog) 8 56222213 56248894 - 22301074;30032202 116907191 MODEL JAAIVD010000027;XM_032910149;XM_032910150;XM_032910151;XM_032910152 XP_032766040;XP_032766041;XP_032766042;XP_032766043 kinesin-like protein KIF23 protein-coding 625959325 Msl2 MSL complex subunit 2 ENCODES a protein that exhibits histone H2B ubiquitin ligase activity (ortholog); promoter-enhancer loop anchoring activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN DNA damage response (ortholog); epigenetic regulation of gene expression (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Karayol-Borroto-Haghshenas Neurodevelopmental Syndrome (ortholog); FOUND IN chromatin (ortholog); MSL complex (ortholog); nucleus (ortholog) 8 92442834 92467286 + 22301074;30032202 116907251 MODEL JAAIVD010000027;XM_032910209 XP_032766100 E3 ubiquitin-protein ligase MSL2 protein-coding 625959331 LOC116884466 N-alpha-acetyltransferase 11 15 52012378 52018813 - 30032202 116884466 MODEL JAAIVD010000010;XM_032885574 XP_032741465 protein-coding 625959339 Ilk integrin linked kinase ENCODES a protein that exhibits ATP binding (ortholog); integrin binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); actin filament network formation (ortholog); branching involved in ureteric bud morphogenesis (ortholog); PARTICIPATES IN altered integrin mediated signaling pathway; integrin mediated signaling pathway; pancreatic cancer pathway; ASSOCIATED WITH cardiomyopathy (ortholog); Cocaine-Related Disorders (ortholog); Colonic Polyps (ortholog); FOUND IN axon (ortholog); cell-cell junction (ortholog); centrosome (ortholog) 2 104578387 104584650 + 22301074;30032202 116891825 MODEL JAAIVD010000001;XM_032893190 XP_032749081 integrin-linked protein kinase protein-coding 625959356 Rpa2 replication protein A2 ENCODES a protein that exhibits damaged DNA binding (ortholog); DNA binding (ortholog); enzyme binding (ortholog); INVOLVED IN base-excision repair (ortholog); DNA replication (ortholog); double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; FOUND IN chromatin (ortholog); chromosome, telomeric region (ortholog); DNA replication factor A complex (ortholog) 1 25461393 25471849 - 22301074;30032202 116895389 MODEL JAAIVD010000025;XM_032896683 XP_032752574 replication protein A 32 kDa subunit protein-coding 625959369 Fbxo36 F-box protein 36 4 157537302 157603928 + 22301074 116899576 MODEL JAAIVD010000003;XM_032901512 XP_032757403 F-box only protein 36 protein-coding 625959377 Stmn2 stathmin 2 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); negative regulation of microtubule depolymerization (ortholog); negative regulation of microtubule polymerization (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); motor peripheral neuropathy (ortholog); neuropathy (ortholog); FOUND IN cytoplasm (ortholog); growth cone (ortholog); lamellipodium (ortholog) 3 142681994 142731031 + 22301074;30032202 116897024 MODEL JAAIVD010000012;XM_032898637 XP_032754528 stathmin-2 protein-coding 625959386 Stap2 signal transducing adaptor family member 2 FOUND IN plasma membrane (ortholog) 4 87389344 87397577 - 30032202 116899163 MODEL JAAIVD010000003;XM_032900726 XP_032756617 signal-transducing adaptor protein 2 protein-coding 625959403 Slc26a2 solute carrier family 26 member 2 ENCODES a protein that exhibits oxalate transmembrane transporter activity (ortholog); solute:inorganic anion antiporter activity (ortholog); sulfate transmembrane transporter activity (ortholog); INVOLVED IN chondrocyte differentiation (ortholog); chondrocyte proliferation (ortholog); oxalate transport (ortholog); ASSOCIATED WITH 3MC syndrome 2 (ortholog); achondrogenesis (ortholog); achondrogenesis type IB (ortholog); FOUND IN apical plasma membrane (ortholog); microvillus membrane (ortholog); plasma membrane (ortholog) 15 70738785 70752735 + 22301074;30032202 116884463 MODEL JAAIVD010000010;XM_032885566;XM_032885567 XP_032741457;XP_032741458 sulfate transporter protein-coding 625959415 Cimip2c ciliary microtubule inner protein 2C INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); sperm flagellum (ortholog) 7 23598663 23616311 - 116905727 MODEL JAAIVD010000026;XM_032908695 XP_032764586 Fam166c family with sequence similarity 166 member C;protein FAM166C protein-coding 625959423 LOC116885210 NADPH--cytochrome P450 reductase ENCODES a protein that exhibits cytochrome-b5 reductase activity, acting on NAD(P)H (ortholog); electron transfer activity (ortholog); enzyme activator activity (ortholog); INVOLVED IN carnitine metabolic process (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); cellular response to gonadotropin stimulus (ortholog); PARTICIPATES IN aldosterone biosynthetic pathway; cortisol biosynthetic pathway; doxorubicin pharmacokinetics pathway; ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); amenorrhea (ortholog); Antley-Bixler syndrome (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 16 18289979 18337656 - 22301074;30032202 116885210 MODEL JAAIVD010000004;XM_032886441 XP_032742332 protein-coding 625959443 LOC116897808 60S ribosomal protein L31-like 4 7594657 7595104 + 116897808 MODEL JAAIVD010000003 pseudo 625959444 Ttc9c tetratricopeptide repeat domain 9C ASSOCIATED WITH Prostatic Neoplasms (ortholog) 2 9128257 9137303 + 22301074 116890924 MODEL JAAIVD010000001;XM_032891561;XM_032891562;XM_032891563 XP_032747452;XP_032747453;XP_032747454 tetratricopeptide repeat protein 9C protein-coding 625959456 Znf205 zinc finger protein 205 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of hydrogen peroxide biosynthetic process (ortholog); positive regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog) 9 896537 904806 - 30032202 116910001 MODEL JAAIVD010000002;XM_032913785;XM_032913786;XM_032913787 XP_032769676;XP_032769677;XP_032769678 protein-coding 625959472 LOC116912252 glyceraldehyde-3-phosphate dehydrogenase-like 11 16454320 16455330 - 22301074;30032202 116912252 MODEL JAAIVD010000006;XM_032916238 XP_032772129 protein-coding 625959476 LOC116884764 interferon-inducible GTPase 1-like 15 71596764 71607557 - 22301074;30032202 116884764 MODEL JAAIVD010000010;XM_032885980 XP_032741871 protein-coding 625959482 Ercc6 ERCC excision repair 6, chromatin remodeling factor ENCODES a protein that exhibits ATP binding (ortholog); ATP-dependent activity, acting on DNA (ortholog); ATP-dependent chromatin remodeler activity (ortholog); INVOLVED IN base-excision repair (ortholog); DNA damage checkpoint signaling (ortholog); DNA damage response (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH age related macular degeneration 5 (ortholog); Agenesis of Corpus Callosum (ortholog); arthrogryposis multiplex congenita (ortholog); FOUND IN nuclear body (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 13 8222513 8294516 + 22301074;30032202 116914242 MODEL JAAIVD010000008;XM_032918450 XP_032774341 DNA excision repair protein ERCC-6 protein-coding 625959507 Rnase11 ribonuclease A family member 11 (inactive) 12 72264681 72266644 + 30032202 116914094 MODEL JAAIVD010000007;XM_032918408 XP_032774299 probable ribonuclease 11 protein-coding 625959513 LOC116889147 small integral membrane protein 10-like protein 2A X 117009652 117010042 + 116889147 MODEL JAAIVD010000014;XM_032890315 XP_032746206 protein-coding 625959518 LOC116895981 transcription and mRNA export factor ENY2-like 3 157866754 157868483 + 116895981 MODEL JAAIVD010000012 pseudo 625959519 Tmprss11a transmembrane serine protease 11A 11 761630 800036 - 22301074 116912096 MODEL JAAIVD010000006;XM_032915987 XP_032771878 transmembrane protease serine 11A protein-coding 625959529 LOC116883799 pyruvate kinase PKM-like 14 45776488 45778035 + 116883799 MODEL JAAIVD010000009 pseudo 625959530 LOC116901391 uncharacterized LOC116901391 5 26801980 26985394 + 116901391 MODEL JAAIVD010000023;XR_004387986 ncrna 625959536 LOC116906315 U6 spliceosomal RNA 7 106491455 106491562 + 116906315 MODEL JAAIVD010000026;XR_004388603 snrna 625959539 KEG97_t16 tRNA-Arg MT 9792 9859 + 64988254 trna 625959540 S100g S100 calcium binding protein G PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH gestational diabetes (ortholog); pre-eclampsia (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) X 23404875 23407483 + 22301074;30032202 116888393 MODEL JAAIVD010000014;XM_032889665;XM_032889666 XP_032745556;XP_032745557 protein S100-G protein-coding 625959550 Gphn gephyrin ENCODES a protein that exhibits identical protein binding (ortholog); molecular adaptor activity (ortholog); molybdopterin adenylyltransferase activity (ortholog); INVOLVED IN establishment of protein localization (ortholog); establishment of synaptic specificity at neuromuscular junction (ortholog); gamma-aminobutyric acid receptor clustering (ortholog); PARTICIPATES IN Inhibitory synaptic transmission pathway; molybdenum cofactor biosynthetic pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) 7 92506553 92795666 + 22301074;30032202 116905195 MODEL JAAIVD010000026;XM_032907990 XP_032763881 protein-coding 625959577 LOC116898380 olfactory receptor 183-like 4 70319385 70323394 - 116898380 MODEL JAAIVD010000003 pseudo 625959578 Faxc failed axon connections homolog, metaxin like GST domain containing ASSOCIATED WITH prostate cancer (ortholog) 1 121352393 121414115 - 30032202 116902878 MODEL JAAIVD010000025;XM_032905212 XP_032761103 failed axon connections homolog protein-coding 625959588 LOC116888479 60 kDa heat shock protein, mitochondrial-like 1 92538299 92540062 + 116888479 MODEL JAAIVD010000025 pseudo 625959589 LOC116904438 cystic fibrosis transmembrane conductance regulator 6 119860484 120138037 + 22301074;30032202 116904438 MODEL JAAIVD010000024;XM_032907266 XP_032763157 protein-coding 625959606 Trnaf-gaa transfer RNA phenylalanine (anticodon GAA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 12 7847980 7848052 + 116914204 MODEL JAAIVD010000007 trna 625959607 LOC116906036 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like 7 38873263 38873601 + 116906036 MODEL JAAIVD010000026 pseudo 625959608 LOC116911684 contactin-associated protein like 5-4 10 81520642 81986483 - 116911684 MODEL JAAIVD010000005;XM_032915638;XM_032915639 XP_032771529;XP_032771530 protein-coding 625959625 LOC116890014 40S ribosomal protein SA-like 1 6667599 6668757 + 116890014 MODEL JAAIVD010000025 pseudo 625959626 LOC116912968 small nucleolar RNA SNORA48 11 25450562 25450703 - 116912968 MODEL JAAIVD010000006;XR_004389534 snorna 625959629 LOC116894023 olfactory receptor 51B6-like 2 101971800 101972753 + 22301074 116894023 MODEL JAAIVD010000001;XM_032895739 XP_032751630 protein-coding 625959632 Trnas-uga transfer RNA serine (anticodon UGA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41787314 41787395 + 116884218 MODEL JAAIVD010000009 trna 625959633 LOC116894915 U7 small nuclear RNA 2 220672708 220672769 - 116894915 MODEL JAAIVD010000001;XR_004387117 snrna 625959636 LOC116889761 small nuclear ribonucleoprotein G-like 116889761 MODEL JAAIVD010000081 pseudo 625959637 LOC116889616 histone demethylase UTY-like Y 136762 158928 + 22301074;30032202 116889616 MODEL JAAIVD010000015;XM_032890541 XP_032746432 protein-coding 625959648 LOC116914949 ral guanine nucleotide dissociation stimulator-like 13 11616202 11617886 - 116914949 MODEL JAAIVD010000008 pseudo 625959649 Oscp1 organic solute carrier partner 1 ENCODES a protein that exhibits transmembrane transporter activity (ortholog); INVOLVED IN xenobiotic detoxification by transmembrane export across the plasma membrane (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN basal plasma membrane (ortholog); cytoplasm (ortholog) 1 32204412 32240285 - 30032202 116896739 MODEL JAAIVD010000025;XM_032898176;XM_032898185 XP_032754067;XP_032754076 protein OSCP1 protein-coding 625959665 LOC116909683 olfactory receptor 6C1-like 1 160771401 160772356 + 116909683 MODEL JAAIVD010000025 pseudo 625959666 Hmbs hydroxymethylbilane synthase ENCODES a protein that exhibits amine binding (ortholog); carboxylic acid binding (ortholog); hydroxymethylbilane synthase activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); astrocyte differentiation (ortholog); cellular response to amine stimulus (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; heme biosynthetic pathway; ASSOCIATED WITH Abdominal Pain (ortholog); acute intermittent porphyria (ortholog); Acute Intermittent Porphyria, Nonerythroid Variant (ortholog); FOUND IN axon (ortholog); condensed chromosome (ortholog); cytosol (ortholog) 8 38893551 38901085 - 22301074;30032202 116907086 MODEL JAAIVD010000027;XM_032910050;XM_032910051 XP_032765941;XP_032765942 porphobilinogen deaminase protein-coding 625959688 LOC116900554 olfactory receptor 4K14-like 5 89916394 89917335 - 22301074 116900554 MODEL JAAIVD010000023;XM_032902280 XP_032758171 protein-coding 625959692 Zyg11a zyg-11 family member A, cell cycle regulator 1 46626838 46662176 + 22301074;30032202 116887489 MODEL JAAIVD010000025;XM_032889116 XP_032745007 protein zyg-11 homolog A protein-coding 625959708 LOC116903984 uncharacterized LOC116903984 1 142127916 142129586 - 116903984 MODEL JAAIVD010000025 pseudo 625959709 Fgf18 fibroblast growth factor 18 ENCODES a protein that exhibits type 1 fibroblast growth factor receptor binding (ortholog); type 2 fibroblast growth factor receptor binding (ortholog); INVOLVED IN angiogenesis (ortholog); chondrocyte development (ortholog); endochondral ossification (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH Diaphragmatic Hernia (ortholog); Dwarfism (ortholog); lung adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleus (ortholog) 9 5945375 5975364 - 22301074;30032202 116909115 MODEL JAAIVD010000002;XM_032912591 XP_032768482 protein-coding 625959718 Rtkn rhotekin ENCODES a protein that exhibits GTPase inhibitor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN regulation of apoptotic process (ortholog); Rho protein signal transduction (ortholog); signal transduction (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog) 6 63074099 63090918 - 22301074;30032202 116903621 MODEL JAAIVD010000024;XM_032906274;XM_032906275;XM_032906276;XM_032906278;XM_032906279;XM_032906280 XP_032762165;XP_032762166;XP_032762167;XP_032762169;XP_032762170;XP_032762171 protein-coding 625959752 LOC116904775 small nucleolar RNA SNORA17 6 23851337 23851456 + 116904775 MODEL JAAIVD010000024 pseudo 625959753 Acox1 acyl-CoA oxidase 1 ENCODES a protein that exhibits acyl-CoA oxidase activity (ortholog); FAD binding (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); fatty acid beta-oxidation using acyl-CoA oxidase (ortholog); fatty acid biosynthetic process (ortholog); ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); peroxisomal matrix (ortholog); peroxisomal membrane (ortholog) 9 67866534 67891310 + 22301074;30032202 116908524 MODEL JAAIVD010000002;XM_032911700;XM_032911701 XP_032767591;XP_032767592 peroxisomal acyl-coenzyme A oxidase 1 protein-coding 625959773 LOC116888771 myosin light chain 6B-like X 35477894 35478516 - 116888771 MODEL JAAIVD010000014 pseudo 625959774 Mterf1 mitochondrial transcription termination factor 1 ENCODES a protein that exhibits double-stranded DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN DNA geometric change (ortholog); DNA-templated transcription termination (ortholog); termination of mitochondrial transcription (ortholog); FOUND IN mitochondrial nucleoid (ortholog); mitochondrion (ortholog) 6 136192460 136197901 - 22301074;30032202 116904122 MODEL JAAIVD010000024;XM_032907007;XR_004388329 XP_032762898 transcription termination factor 1, mitochondrial protein-coding 625959783 LOC116892754 vomeronasal type-1 receptor 2-like 2 180986110 180987039 - 22301074;30032202 116892754 MODEL JAAIVD010000001;XM_032894632 XP_032750523 protein-coding 625959787 Sft2d2 SFT2 domain containing 2 10 44343857 44359723 - 22301074;30032202 116911195 MODEL JAAIVD010000005;XM_032915066 XP_032770957 vesicle transport protein SFT2B protein-coding 625959799 LOC116908399 small nucleolar RNA SNORA17 8 81405578 81405708 + 116908399 MODEL JAAIVD010000027;XR_004388943 snorna 625959802 Sardh sarcosine dehydrogenase ENCODES a protein that exhibits flavin adenine dinucleotide binding (ortholog); folic acid binding (ortholog); sarcosine dehydrogenase activity (ortholog); INVOLVED IN choline catabolic process (ortholog); glycine biosynthetic process (ortholog); tetrahydrofolate interconversion (ortholog); PARTICIPATES IN choline metabolic pathway; dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); Hypoxia (ortholog); sarcosinemia (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 5 9411910 9474359 + 22301074;30032202 116901241 MODEL JAAIVD010000023;XM_032902992 XP_032758883 sarcosine dehydrogenase, mitochondrial protein-coding 625959828 Hm13 histocompatibility minor 13 ENCODES a protein that exhibits aspartic endopeptidase activity, intramembrane cleaving (ortholog); peptidase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN membrane protein ectodomain proteolysis (ortholog); membrane protein intracellular domain proteolysis (ortholog); membrane protein proteolysis (ortholog); ASSOCIATED WITH Herpesviridae Infections (ortholog); steatotic liver disease (ortholog); FOUND IN cell surface (ortholog); cytoplasmic side of endoplasmic reticulum membrane (ortholog); Derlin-1 retrotranslocation complex (ortholog) 5 131998125 132033598 + 22301074;30032202 116902123 MODEL JAAIVD010000023;XM_032904438;XM_032904439;XM_032904440 XP_032760329;XP_032760330;XP_032760331 minor histocompatibility antigen H13 protein-coding 625959851 Zmym5 zinc finger MYM-type containing 5 INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog) 12 68026807 68043055 + 22301074 116913334 MODEL JAAIVD010000007;XM_032917482 XP_032773373 zinc finger MYM-type protein 5 protein-coding 625959861 Tmco5a transmembrane and coiled-coil domains 5A ASSOCIATED WITH prostate cancer (ortholog); FOUND IN plasma membrane (ortholog) 5 95027891 95042002 + 116901769 MODEL JAAIVD010000023;XM_032903909;XM_032903910 XP_032759800;XP_032759801 transmembrane and coiled-coil domain-containing protein 5A protein-coding 625959876 LOC116886756 5S ribosomal RNA 17 43150245 43150363 - 116886756 MODEL JAAIVD010000011;XR_004386158 rrna 625959879 LOC116903226 cytochrome c oxidase subunit 7B, mitochondrial 6 19550062 19550531 + 22301074;30032202 116903226 MODEL JAAIVD010000024;XM_032905600 XP_032761491 protein-coding 625959884 LOC116894534 vomeronasal type-2 receptor 116-like 2 176123650 176142873 - 116894534 MODEL JAAIVD010000001 pseudo 625959885 LOC116899590 uncharacterized LOC116899590 4 158596908 158598467 + 116899590 MODEL JAAIVD010000003;XR_004387737 ncrna 625959889 Plcb1 phospholipase C beta 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calmodulin binding (ortholog); enzyme binding (ortholog); INVOLVED IN activation of meiosis involved in egg activation (ortholog); cellular response to fluoride (ortholog); cellular response to glyceraldehyde (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); benign epilepsy with centrotemporal spikes (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); GABA-ergic synapse (ortholog) 5 114455130 115126707 + 22301074;30032202 116902013 MODEL JAAIVD010000023;XM_032904280;XM_032904282 XP_032760171;XP_032760173 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 protein-coding 625959930 LOC116887894 2,4-dienoyl-CoA reductase, mitochondrial-like X 51530588 51532506 - 116887894 MODEL JAAIVD010000014 pseudo 625959931 LOC116889633 U6 spliceosomal RNA Y 2257678 2257774 + 116889633 MODEL JAAIVD010000015 pseudo 625959932 Tmem106a transmembrane protein 106A INVOLVED IN glycoprotein biosynthetic process (ortholog); intracellular signal transduction (ortholog); macrophage activation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); neuromuscular disease (ortholog); FOUND IN plasma membrane (ortholog) 9 60863903 60871839 + 116910029 MODEL JAAIVD010000002;XM_032913813;XM_032913814 XP_032769704;XP_032769705 protein-coding 625959948 Trnal-cag transfer RNA leucine (anticodon CAG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 17 14550638 14550720 - 116886806 MODEL JAAIVD010000011 trna 625959949 LOC116899969 ribosome biogenesis protein NSA2 homolog 5 114558904 114559819 - 116899969 MODEL JAAIVD010000023 pseudo 625959950 Nmd3 NMD3 ribosome export adaptor ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); ribosomal large subunit binding (ortholog); INVOLVED IN positive regulation of protein localization to nucleolus (ortholog); positive regulation of RNA biosynthetic process (ortholog); ribosomal large subunit export from nucleus (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 3 85577341 85603451 - 30032202 116896788 MODEL JAAIVD010000012;XM_032898257 XP_032754148 60S ribosomal export protein NMD3 protein-coding 625959970 LOC116913253 PC4 and SFRS1-interacting protein-like 12 83735612 83738361 - 116913253 MODEL JAAIVD010000007 pseudo 625959971 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92685116 92685187 + 116904835 MODEL JAAIVD010000024 trna 625959972 LOC116914114 small nucleolar RNA SNORA17 12 83622510 83622641 + 116914114 MODEL JAAIVD010000007;XR_004389679 snorna 625959975 Tas2r42 taste 2 receptor member 42 ENCODES a protein that exhibits bitter taste receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); FOUND IN membrane (ortholog) 6 15925281 15926231 - 22301074;30032202 116903768 MODEL JAAIVD010000024;XM_032906457 XP_032762348 taste receptor type 2 member 42 protein-coding 625959978 LOC116890358 U6 spliceosomal RNA 1 84045348 84045454 - 116890358 MODEL JAAIVD010000025;XR_004386576 snrna 625959981 LOC116889654 L-lactate dehydrogenase-like 22301074 116889654 MODEL JAAIVD010000045;XM_032890559 XP_032746450 protein-coding 625959982 Rflnb refilin B ENCODES a protein that exhibits filamin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle organization (ortholog); epithelial to mesenchymal transition (ortholog); ASSOCIATED WITH cholestasis (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament bundle (ortholog) 9 94744974 94750936 - 22301074;30032202 116910038 MODEL JAAIVD010000002;XM_032913825;XM_032913826 XP_032769716;XP_032769717 refilin-B protein-coding 625959995 LOC116910087 serine/arginine-rich splicing factor 3-like 9 9199023 9200579 + 22301074;30032202 116910087 MODEL JAAIVD010000002;XM_032913909 XP_032769800 protein-coding 625960000 Prorp protein only RNase P catalytic subunit ENCODES a protein that exhibits ribonuclease P activity (ortholog); INVOLVED IN mitochondrial tRNA 5'-end processing (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 54 (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog); mitochondrial ribonuclease P complex (ortholog) 7 68524034 68608278 + 22301074;30032202 116905056 MODEL JAAIVD010000026;XM_032907750 XP_032763641 mitochondrial ribonuclease P catalytic subunit protein-coding 625960011 LOC116886682 carboxylesterase 1D 17 15053461 15114900 + 30032202 116886682 MODEL JAAIVD010000011;XM_032888177;XM_032888178 XP_032744068;XP_032744069 protein-coding 625960033 LOC116892708 leukocyte immunoglobulin-like receptor subfamily B member 3 2 178479572 178485984 - 30032202 116892708 MODEL JAAIVD010000001;XM_032894573 XP_032750464 protein-coding 625960046 LOC116912335 60S ribosomal protein L9-like 11 80128774 80129351 + 116912335 MODEL JAAIVD010000006 pseudo 625960047 Fzd6 frizzled class receptor 6 ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); Wnt receptor activity (ortholog); Wnt-protein binding (ortholog); INVOLVED IN cell proliferation in midbrain (ortholog); embryonic nail plate morphogenesis (ortholog); establishment of body hair planar orientation (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, non-canonical pathway; Wnt signaling, the planar cell polarity pathway; ASSOCIATED WITH genetic disease (ortholog); Hydrops Fetalis (ortholog); nail disease (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); apicolateral plasma membrane (ortholog) 1 212144393 212174816 - 30032202 116910841 MODEL JAAIVD010000025;XM_032914595 XP_032770486 frizzled-6 protein-coding 625960057 Lsmem1 leucine rich single-pass membrane protein 1 FOUND IN cytosol (ortholog) 7 53412362 53417851 - 116905829 MODEL JAAIVD010000026;XM_032908795 XP_032764686 leucine-rich single-pass membrane protein 1 protein-coding 625960062 Sacm1l SAC1 like phosphatidylinositide phosphatase ENCODES a protein that exhibits phosphatase activity (ortholog); phosphatidylinositol-3,5-bisphosphate phosphatase activity (ortholog); phosphatidylinositol-3-phosphate phosphatase activity (ortholog); INVOLVED IN exocytic insertion of neurotransmitter receptor to postsynaptic membrane (ortholog); neurotransmitter receptor transport to postsynaptic membrane (ortholog); phosphatidylinositol dephosphorylation (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog) 8 114654457 114712678 + 30032202 116908027 MODEL JAAIVD010000027;XM_032911292 XP_032767183 phosphatidylinositide phosphatase SAC1 protein-coding 625960086 LOC116886923 60S ribosomal protein L21-like 1 29303136 29303690 - 22301074;30032202 116886923 MODEL JAAIVD010000025;XM_032888406 XP_032744297 protein-coding 625960091 Sp1 Sp1 transcription factor ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN cellular response to estrogen stimulus (ortholog); cellular response to insulin stimulus (ortholog); cellular response to wortmannin (ortholog); PARTICIPATES IN forkhead class A signaling pathway; hypoxia inducible factor pathway; interleukin-4 signaling pathway; ASSOCIATED WITH Carotid Artery Injuries (ortholog); Colorectal Neoplasms (ortholog); Disease Progression (ortholog); FOUND IN chromatin (ortholog); euchromatin (ortholog); nucleoplasm (ortholog) 1 260642848 260671493 - 30032202 116883469 MODEL JAAIVD010000025;XM_032884625;XM_032884632 XP_032740516;XP_032740523 transcription factor Sp1 protein-coding 625960103 Tox thymocyte selection associated high mobility group box ENCODES a protein that exhibits chromatin DNA binding (ortholog); INVOLVED IN CD4-positive, alpha-beta T cell lineage commitment (ortholog); CD4-positive, CD25-positive, alpha-beta regulatory T cell lineage commitment (ortholog); CD8-positive, alpha-beta T cell lineage commitment (ortholog); FOUND IN nucleus (ortholog) 1 135357618 135508703 - 30032202 116903543 MODEL JAAIVD010000025;XM_032906160 XP_032762051 thymocyte selection-associated high mobility group box protein TOX protein-coding 625960115 LOC116905506 rRNA 2'-O-methyltransferase fibrillarin-like 7 129596314 129597155 + 116905506 MODEL JAAIVD010000026 pseudo 625960116 Znf143 zinc finger protein 143 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin loop anchoring activity (ortholog); core promoter sequence-specific DNA binding (ortholog); INVOLVED IN chromatin looping (ortholog); positive regulation of smooth muscle cell proliferation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH inherited metabolic disorder (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 91357212 91392595 - 30032202 116891666 MODEL JAAIVD010000001;XM_032892918;XM_032892919;XM_032892920 XP_032748809;XP_032748810;XP_032748811 protein-coding 625960141 Plp2 proteolipid protein 2 ENCODES a protein that exhibits chemokine binding (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN plasma membrane (ortholog) X 14461068 14464635 + 22301074 116888682 MODEL JAAIVD010000014;XM_032889977 XP_032745868 protein-coding 625960150 LOC116911588 60S ribosomal protein L7-like 10 48206488 48207144 - 30032202 116911588 MODEL JAAIVD010000005;XM_032915566 XP_032771457 protein-coding 625960153 Slc52a3 solute carrier family 52 member 3 ENCODES a protein that exhibits riboflavin transmembrane transporter activity (ortholog); INVOLVED IN cellular response to heat (ortholog); riboflavin transport (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH Auditory Neuropathy (ortholog); Brown-Vialetto-Van Laere syndrome (ortholog); Brown-Vialetto-Van Laere syndrome 1 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog) 5 131361077 131373595 + 22301074;30032202 116902112 MODEL JAAIVD010000023;XM_032904424;XM_032904425 XP_032760315;XP_032760316 solute carrier family 52, riboflavin transporter, member 3 protein-coding 625960171 Polr3k RNA polymerase III subunit K ENCODES a protein that exhibits zinc ion binding (ortholog); INVOLVED IN termination of RNA polymerase III transcription (ortholog); transcription by RNA polymerase III (ortholog); transcription initiation at RNA polymerase III promoter (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH Disease Progression (ortholog); hypomyelinating leukodystrophy 21 (ortholog); Stomach Neoplasms (ortholog); FOUND IN RNA polymerase III complex (ortholog) 1 104919 109162 + 22301074;30032202 116890660 MODEL JAAIVD010000025;XM_032891058 XP_032746949 DNA-directed RNA polymerase III subunit RPC10 protein-coding 625960178 LOC116889354 uncharacterized LOC116889354 X 69908518 69909881 - 116889354 MODEL JAAIVD010000014;XR_004386377 ncrna 625960182 Jag2 jagged canonical Notch ligand 2 ENCODES a protein that exhibits growth factor activity (ortholog); Notch binding (ortholog); INVOLVED IN auditory receptor cell fate commitment (ortholog); cell differentiation (ortholog); epithelial cell apoptotic process involved in palatal shelf morphogenesis (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 27 (ortholog); Breast Neoplasms (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN membrane (ortholog); perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog) 7 130506433 130528632 - 22301074;30032202 116905523 MODEL JAAIVD010000026;XM_032908547 XP_032764438 protein jagged-2 protein-coding 625960212 LOC116898848 serine/arginine repetitive matrix protein 1-like 1 99674042 99678052 + 116898848 MODEL JAAIVD010000025;XM_032900242 XP_032756133 protein-coding 625960218 Ldoc1 LDOC1 regulator of NFKB signaling INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to muramyl dipeptide (ortholog); maternal placenta development (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) X 121092397 121095605 + 116888581 MODEL JAAIVD010000014;XM_032889881 XP_032745772 protein LDOC1 protein-coding 625960224 Septin7 septin 7 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); identical protein binding (ortholog); structural constituent of postsynapse (ortholog); INVOLVED IN collateral sprouting (ortholog); cortical cytoskeleton organization (ortholog); cytoskeleton organization (ortholog); FOUND IN actin cytoskeleton (ortholog); axon terminus (ortholog); axoneme (ortholog) 8 21179571 21241816 + 22301074;30032202 116907755 MODEL JAAIVD010000027;XM_032910892;XM_032910893;XM_032910894 XP_032766783;XP_032766784;XP_032766785 septin-7 protein-coding 625960247 Gabra1 gamma-aminobutyric acid type A receptor subunit alpha1 ENCODES a protein that exhibits diazepam binding (ortholog); GABA receptor activity (ortholog); GABA-A receptor activity (ortholog); INVOLVED IN cellular response to histamine (ortholog); chloride transmembrane transport (ortholog); gamma-aminobutyric acid signaling pathway (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); Ataxia (ortholog); autistic disorder (ortholog); FOUND IN dendritic spine (ortholog); GABA receptor complex (ortholog); GABA-A receptor complex (ortholog) 9 24984623 25041196 - 22301074;30032202 116908501 MODEL JAAIVD010000002;XM_032911671 XP_032767562 gamma-aminobutyric acid receptor subunit alpha-1 protein-coding 625960261 LOC116910190 vesicle-associated membrane protein 3-like 9 62790286 62790595 - 116910190 MODEL JAAIVD010000002 pseudo 625960262 LOC116888784 cytochrome c-type heme lyase ENCODES a protein that exhibits heme binding (ortholog); holocytochrome-c synthase activity (ortholog); INVOLVED IN cytochrome c-heme linkage (ortholog); ASSOCIATED WITH COVID-19 (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); mitochondrion (ortholog) X 27781824 27790842 + 22301074;30032202 116888784 MODEL JAAIVD010000014;XM_032890066 XP_032745957 protein-coding 625960272 LOC116890269 oogenesin-3-like 1 14591531 14597768 + 22301074;30032202 116890269 MODEL JAAIVD010000025;XM_032890987 XP_032746878 protein-coding 625960279 LOC116894902 U6 spliceosomal RNA 2 7441701 7441807 + 116894902 MODEL JAAIVD010000001;XR_004387105 snrna 625960282 LOC116902587 small nucleolar RNA SNORA17 5 108810764 108810899 + 116902587 MODEL JAAIVD010000023;XR_004388179 snorna 625960285 Pllp plasmolipin ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN monoatomic ion transport (ortholog); myelin assembly (ortholog); myelination (ortholog); ASSOCIATED WITH malignant mesothelioma (ortholog); schizophrenia (ortholog); FOUND IN apical plasma membrane (ortholog); compact myelin (ortholog); membrane raft (ortholog) 17 1562271 1582948 - 22301074;30032202 116886387 MODEL JAAIVD010000011;XM_032887853 XP_032743744 protein-coding 625960293 LOC116887773 small nucleolar RNA SNORD83 18 7847712 7847786 + 116887773 MODEL JAAIVD010000013;XR_004386270 snorna 625960296 Mbip MAP3K12 binding inhibitory protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of gene expression (ortholog); positive regulation of JNK cascade (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN ATAC complex (ortholog); cytosol (ortholog); nucleolus (ortholog) 7 69692227 69709423 - 30032202 116905066 MODEL JAAIVD010000026;XM_032907769;XM_032907770;XM_032907771 XP_032763660;XP_032763661;XP_032763662 MAP3K12-binding inhibitory protein 1 protein-coding 625960313 LOC116908429 U6atac minor spliceosomal RNA 8 39431012 39431135 + 116908429 MODEL JAAIVD010000027;XR_004388960 snrna 625960316 LOC116883766 aldo-keto reductase family 1 member C15 14 18335853 18362557 + 30032202 116883766 MODEL JAAIVD010000009;XM_032885012 XP_032740903 protein-coding 625960329 LOC116904450 nucleolar GTP-binding protein 1-like 6 127349595 127384327 - 22301074;30032202 116904450 MODEL JAAIVD010000024;XM_032907271 XP_032763162 protein-coding 625960335 LOC116902769 taste receptor type 2 member 117 6 16582273 16583232 + 22301074;30032202 116902769 MODEL JAAIVD010000024;XM_032905111 XP_032761002 protein-coding 625960338 LOC116905554 60S ribosomal protein L26-like 7 8180168 8182223 - 116905554 MODEL JAAIVD010000026 pseudo 625960339 Znf862 zinc finger protein 862 ASSOCIATED WITH gingival fibromatosis (ortholog); Gingival Fibromatosis 6 (ortholog); long QT syndrome (ortholog) 6 92443935 92465130 - 22301074 116903859 MODEL JAAIVD010000024;XM_032906602 XP_032762493 protein-coding 625960349 LOC116894280 glyceraldehyde-3-phosphate dehydrogenase-like 2 124680105 124681127 + 116894280 MODEL JAAIVD010000001 pseudo 625960350 Gpr37l1 G protein-coupled receptor 37 like 1 ENCODES a protein that exhibits G protein-coupled peptide receptor activity (ortholog); G protein-coupled receptor activity (ortholog); peptide binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cellular response to reactive oxygen species (ortholog); negative regulation of astrocyte differentiation (ortholog); ASSOCIATED WITH amenorrhea (ortholog); FOUND IN plasma membrane (ortholog); signaling receptor complex (ortholog) 10 543747 550380 + 30032202 116911391 MODEL JAAIVD010000005;XM_032915344 XP_032771235 G-protein coupled receptor 37-like 1 protein-coding 625960356 LOC116894076 olfactory receptor 52E2 2 103049137 103050090 - 22301074 116894076 MODEL JAAIVD010000001;XM_032895799 XP_032751690 protein-coding 625960359 LOC116910722 small nucleolar RNA SNORA17 9 26049154 26049239 + 116910722 MODEL JAAIVD010000002 pseudo 625960360 Ap1g1 adaptor related protein complex 1 subunit gamma 1 ENCODES a protein that exhibits collagen binding (ortholog); GTP-dependent protein binding (ortholog); kinesin binding (ortholog); INVOLVED IN endosome to melanosome transport (ortholog); Golgi to lysosome transport (ortholog); positive regulation of natural killer cell degranulation (ortholog); ASSOCIATED WITH genetic disease (ortholog); Neurodevelopmental Disorders (ortholog); USMANI-RIAZUDDIN SYNDROME, AUTOSOMAL DOMINANT (ortholog); FOUND IN clathrin-coated vesicle (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 17 29489003 29575367 + 22301074;30032202 116886559 MODEL JAAIVD010000011;XM_032888076;XM_032888077 XP_032743967;XP_032743968 AP-1 complex subunit gamma-1 protein-coding 625960391 Rab8b RAB8B, member RAS oncogene family ENCODES a protein that exhibits GDP binding (ortholog); signaling receptor binding (ortholog); TPR domain binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); cell-substrate junction organization (ortholog); cilium assembly (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Liver Reperfusion Injury (ortholog); FOUND IN cell tip (ortholog); endosome membrane (ortholog); perinuclear region of cytoplasm (ortholog) 8 61208003 61278510 - 22301074;30032202 116908286 MODEL JAAIVD010000027;XM_032911546 XP_032767437 ras-related protein Rab-8B protein-coding 625960403 Sac3d1 SAC3 domain containing 1 INVOLVED IN centrosome duplication (ortholog); negative regulation of receptor signaling pathway via JAK-STAT (ortholog); regulation of immune response (ortholog); ASSOCIATED WITH melanoma (ortholog); FOUND IN centrosome (ortholog); microtubule cytoskeleton (ortholog); nucleus (ortholog) 2 1566674 1569088 + 30032202 116890673 MODEL JAAIVD010000001;XM_032891081 XP_032746972 SAC3 domain-containing protein 1 protein-coding 625960408 Porcn porcupine O-acyltransferase ENCODES a protein that exhibits palmitoleoyltransferase activity (ortholog); Wnt-protein binding (ortholog); INVOLVED IN glycoprotein metabolic process (ortholog); protein lipidation (ortholog); protein palmitoleylation (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); focal dermal hypoplasia (ortholog); genetic disease (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) X 15606358 15617521 - 30032202 116888774 MODEL JAAIVD010000014;XM_032890060 XP_032745951 protein-serine O-palmitoleoyltransferase porcupine protein-coding 625960426 Vps72 vacuolar protein sorting 72 homolog ENCODES a protein that exhibits histone binding (ortholog); histone chaperone activity (ortholog); INVOLVED IN positive regulation of double-strand break repair via homologous recombination (ortholog); regulation of cell cycle (ortholog); somatic stem cell population maintenance (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; FOUND IN nuclear speck (ortholog); protein-containing complex (ortholog) 3 62130798 62142116 - 30032202 116896569 MODEL JAAIVD010000012;XM_032897778 XP_032753669 vacuolar protein sorting-associated protein 72 homolog protein-coding 625960436 LOC116905545 histone H2A.Z-like 7 4805113 4805499 + 116905545 MODEL JAAIVD010000026 pseudo 625960437 Ppm1d protein phosphatase, Mg2+/Mn2+ dependent 1D ENCODES a protein that exhibits mitogen-activated protein kinase binding (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN cellular response to starvation (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); DNA methylation-dependent constitutive heterochromatin formation (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; p38 MAPK signaling pathway; p53 signaling pathway; ASSOCIATED WITH Brain Stem Neoplasms (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 9 85374816 85410249 - 22301074;30032202 116908924 MODEL JAAIVD010000002;XM_032912382 XP_032768273 protein phosphatase 1D protein-coding 625960447 Bex3 brain expressed X-linked 3 ENCODES a protein that exhibits death receptor binding (ortholog); identical protein binding (ortholog); molecular function inhibitor activity (ortholog); INVOLVED IN extrinsic apoptotic signaling pathway via death domain receptors (ortholog); negative regulation of protein ubiquitination (ortholog); ASSOCIATED WITH Experimental Seizures (ortholog); glaucoma (ortholog); transient cerebral ischemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) X 88276969 88278530 + 30032202 116889068 MODEL JAAIVD010000014;XM_032890251;XM_032890252 XP_032746142;XP_032746143 protein BEX3 protein-coding 625960458 Pex2 peroxisomal biogenesis factor 2 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN bile acid biosynthetic process (ortholog); cellular response to reactive oxygen species (ortholog); cholesterol homeostasis (ortholog); ASSOCIATED WITH genetic disease (ortholog); infantile Refsum disease (ortholog); peroxisomal biogenesis disorder (ortholog); FOUND IN Cdc73/Paf1 complex (ortholog); peroxisomal membrane (ortholog); peroxisome (ortholog) 3 139527305 139543448 + 1750930;30032202 116897016 MODEL JAAIVD010000012;X57988;XM_032898620;XM_032898621 CAA41054;XP_032754511;XP_032754512 peroxisome assembly factor-1;peroxisome biogenesis factor 2 protein-coding 625960467 Ovch2 ovochymase 2 ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); INVOLVED IN fertilization (ortholog) 2 105890563 105909982 - 22301074 116894178 MODEL JAAIVD010000001;XM_032895895 XP_032751786 ovochymase-2 protein-coding 625960485 LOC116905848 nascent polypeptide-associated complex subunit alpha 1 155517849 155529890 + 22301074;30032202 116905848 MODEL JAAIVD010000025;XM_032908823;XM_032908831 XP_032764714;XP_032764722 protein-coding 625960500 Slc6a4 solute carrier family 6 member 4 ENCODES a protein that exhibits actin filament binding (ortholog); antiporter activity (ortholog); cocaine binding (ortholog); INVOLVED IN behavioral response to cocaine (ortholog); brain morphogenesis (ortholog); cellular response to cGMP (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH AIDS Dementia Complex (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN endomembrane system (ortholog); focal adhesion (ortholog); Golgi apparatus (ortholog) 9 95681278 95702618 + 22301074;30032202 116909801 MODEL JAAIVD010000002;X63253;XM_032913497 CAA44913;XP_032769388 serotonin transporter;sodium-dependent serotonin transporter protein-coding 625960517 LOC116910587 WAP four-disulfide core domain protein 18-like 9 86968769 86969814 - 22301074;30032202 116910587 MODEL JAAIVD010000002;XM_032914509 XP_032770400 protein-coding 625960521 Tlr4 toll like receptor 4 ENCODES a protein that exhibits identical protein binding (ortholog); lipopolysaccharide binding (ortholog); phosphatidylinositol 3-kinase binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); astrocyte development (ortholog); B cell proliferation involved in immune response (ortholog); PARTICIPATES IN titanium dioxide nanoparticle response pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH Acanthamoeba Keratitis (ortholog); Acne Conglobata (ortholog); Acute Coronary Syndrome (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); endosome membrane (ortholog) 1 86484628 86497678 - 22301074;30032202 116901185 U5LHW2 MODEL JAAIVD010000025;KC811694;KC811695;KC811696;XM_032902869 AGX25489;AGX25490;AGX25491;XP_032758760 toll-like receptor 4 protein-coding 625960528 Tle3 TLE family member 3, transcriptional corepressor ENCODES a protein that exhibits transcription coactivator activity (ortholog); transcription corepressor activity (ortholog); INVOLVED IN fat cell differentiation (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); Breast Neoplasms (ortholog); rheumatoid arthritis (ortholog); FOUND IN beta-catenin-TCF complex (ortholog); chromatin (ortholog); nucleoplasm (ortholog) 8 55674852 55720224 + 22301074;30032202 116906636 MODEL JAAIVD010000027;XM_032909408;XM_032909409;XM_032909410;XM_032909411;XM_032909412;XM_032909413 XP_032765299;XP_032765300;XP_032765301;XP_032765302;XP_032765303;XP_032765304 transducin-like enhancer protein 3 protein-coding 625960563 Rgs17 regulator of G protein signaling 17 INVOLVED IN response to amphetamine (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog) 2 197004544 197040037 + 116892873 MODEL JAAIVD010000001;XM_032894780 XP_032750671 regulator of G-protein signaling 17 protein-coding 625960571 LOC116883507 uncharacterized LOC116883507 14 58027225 58031294 + 116883507 MODEL JAAIVD010000009;XR_004385767 ncrna 625960576 LOC116885850 polypeptide N-acetylgalactosaminyltransferase 12-like 16 3242372 3253482 - 116885850 MODEL JAAIVD010000004 pseudo 625960577 LOC116898095 transmembrane protein 258-like 4 95638486 95638718 - 116898095 MODEL JAAIVD010000003 pseudo 625960578 Kdm5c lysine demethylase 5C ENCODES a protein that exhibits histone H3K4 demethylase activity (ortholog); identical protein binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN gene expression (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; renal cell carcinoma pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); autistic disorder (ortholog); breast cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) X 13383605 13422272 + 22301074;30032202 116889368 MODEL JAAIVD010000014;XM_032890474 XP_032746365 lysine-specific demethylase 5C protein-coding 625960608 Arap2 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog) 11 42937768 43069495 - 22301074 116911949 MODEL JAAIVD010000006;XM_032915862;XM_032915864 XP_032771753;XP_032771755 arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2 protein-coding 625960642 Smarcad1 SNF2 related chromatin remodeling ATPase with DExD box 1 ENCODES a protein that exhibits ATP-dependent chromatin remodeler activity (ortholog); ATP-dependent histone chaperone activity (ortholog); DNA binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); chromosome separation (ortholog); DNA double-strand break processing (ortholog); ASSOCIATED WITH adermatoglyphia (ortholog); asphyxiating thoracic dystrophy (ortholog); BASAN syndrome (ortholog); FOUND IN heterochromatin (ortholog); nuclear replication fork (ortholog); nucleoplasm (ortholog) 6 77628152 77692488 + 22301074;30032202 116903715 MODEL JAAIVD010000024;XM_032906389;XM_032906390 XP_032762280;XP_032762281 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1;SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 protein-coding 625960675 Capsl calcyphosine like INVOLVED IN angiogenesis (ortholog); endothelial cell migration (ortholog); endothelial cell proliferation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); exudative vitreoretinopathy (ortholog) 3 171220120 171248469 - 22301074 116897132 MODEL JAAIVD010000012;XM_032898794 XP_032754685 calcyphosin-like protein protein-coding 625960684 LOC116886004 small nucleolar RNA SNORA17 16 23984674 23984807 + 116886004 MODEL JAAIVD010000004;XR_004386076 snorna 625960687 LOC116900896 olfactory receptor 4A47-like 5 71298381 71299361 - 116900896 MODEL JAAIVD010000023 pseudo 625960688 Fmo1 flavin containing dimethylaniline monoxygenase 1 ENCODES a protein that exhibits hypotaurine monooxygenase activity (ortholog); monooxygenase activity (ortholog); N,N-dimethylaniline monooxygenase activity (ortholog); INVOLVED IN energy homeostasis (ortholog); negative regulation of fatty acid oxidation (ortholog); organic acid metabolic process (ortholog); PARTICIPATES IN tamoxifen pharmacodynamics pathway; tamoxifen pharmacokinetics pathway; ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); autism spectrum disorder (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 10 42094309 42119698 - 22301074;30032202 116911110 MODEL JAAIVD010000005;XM_032914950 XP_032770841 dimethylaniline monooxygenase [N-oxide-forming] 1 protein-coding 625960700 Ptpn23 protein tyrosine phosphatase non-receptor type 23 ENCODES a protein that exhibits protein kinase binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN cilium assembly (ortholog); early endosome to late endosome transport (ortholog); endocytic recycling (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); NEURODEVELOPMENTAL DISORDER AND STRUCTURAL BRAIN ANOMALIES WITH OR WITHOUT SEIZURES AND SPASTICITY (ortholog); FOUND IN ciliary basal body (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 100971200 100990905 - 22301074;30032202 116907666 MODEL JAAIVD010000027;XM_032910757;XM_032910759 XP_032766648;XP_032766650 tyrosine-protein phosphatase non-receptor type 23 protein-coding 625960732 Dkc1 dyskerin pseudouridine synthase 1 ENCODES a protein that exhibits box H/ACA snoRNA binding (ortholog); pseudouridine synthase activity (ortholog); RNA binding (ortholog); INVOLVED IN box H/ACA sno(s)RNA metabolic process (ortholog); enzyme-directed rRNA pseudouridine synthesis (ortholog); positive regulation of cell population proliferation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH anemia (ortholog); aplastic anemia (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); FOUND IN box H/ACA snoRNP complex (ortholog); box H/ACA telomerase RNP complex (ortholog); Cajal body (ortholog) Y 1545204 1559303 + 22301074;30032202 116889610 MODEL JAAIVD010000015;XM_032890538 XP_032746429 H/ACA ribonucleoprotein complex subunit DKC1 protein-coding 625960747 LOC116898229 28S ribosomal protein S36, mitochondrial-like 4 148232449 148233066 + 22301074;30032202 116898229 MODEL JAAIVD010000003;XM_032899584 XP_032755475 protein-coding 625960751 Tff1 trefoil factor 1 INVOLVED IN cell differentiation (ortholog); maintenance of gastrointestinal epithelium (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH Achlorhydria (ortholog); Acute Lung Injury (ortholog); Breast Neoplasms (ortholog); FOUND IN extracellular region (ortholog) 18 2714155 2717891 + 30032202 116887523 MODEL JAAIVD010000013;XM_032889147 XP_032745038 protein-coding 625960758 Slc6a1 solute carrier family 6 member 1 ENCODES a protein that exhibits amino acid:sodium symporter activity (ortholog); gamma-aminobutyric acid transmembrane transporter activity (ortholog); gamma-aminobutyric acid:sodium:chloride symporter activity (ortholog); INVOLVED IN associative learning (ortholog); chloride transmembrane transport (ortholog); gamma-aminobutyric acid import (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); amyotrophic lateral sclerosis (ortholog); autism spectrum disorder (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); GABA-ergic synapse (ortholog) 6 32204334 32219133 - 22301074;30032202 116903394 MODEL JAAIVD010000024;XM_032905896 XP_032761787 sodium- and chloride-dependent GABA transporter 1 protein-coding 625960777 Vdr vitamin D receptor ENCODES a protein that exhibits bile acid nuclear receptor activity (ortholog); calcitriol binding (ortholog); DNA binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); apoptotic signaling pathway (ortholog); calcium ion transport (ortholog); PARTICIPATES IN altered p53 signaling pathway; ASSOCIATED WITH Acute Hepatitis (ortholog); alopecia (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN caveola (ortholog); chromatin (ortholog); cytosol (ortholog) 1 270672487 270722864 - 22301074;30032202 116884591 MODEL JAAIVD010000025;XM_032885736 XP_032741627 vitamin D3 receptor protein-coding 625960791 LOC116906190 CD2 antigen cytoplasmic tail-binding protein 2-like 7 116574554 116575351 - 116906190 MODEL JAAIVD010000026 pseudo 625960792 LOC116889640 Y-linked testis-specific protein 1-like 116889640 MODEL JAAIVD010000021 pseudo 625960793 Cdcp2 CUB domain containing protein 2 1 47699631 47716035 - 116890733 MODEL JAAIVD010000025;XM_032891227 XP_032747118 CUB domain-containing protein 2 protein-coding 625960801 LOC116894334 mas-related G-protein coupled receptor member B8-like 2 152051095 152052079 + 116894334 MODEL JAAIVD010000001 pseudo 625960802 LOC116900501 olfactory receptor 4A15-like 5 71986886 71987839 - 22301074 116900501 MODEL JAAIVD010000023;XM_032902236 XP_032758127 protein-coding 625960805 LOC116891987 heat shock cognate 71 kDa protein-like 2 133538186 133540303 + 116891987 MODEL JAAIVD010000001 pseudo 625960806 LOC116894580 T-complex protein 1 subunit zeta-like 2 180369382 180370924 - 116894580 MODEL JAAIVD010000001 pseudo 625960807 Rprm reprimo, TP53 dependent G2 arrest mediator homolog INVOLVED IN regulation of cell cycle (ortholog); regulation of mitotic cell cycle (ortholog); ASSOCIATED WITH Barrett's esophagus (ortholog); Esophageal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog) 5 31705604 31707431 - 30032202 116901413 MODEL JAAIVD010000023;XM_032903302 XP_032759193 protein reprimo protein-coding 625960812 Cep170b centrosomal protein 170B ASSOCIATED WITH congenital heart disease (ortholog) 7 130313833 130337497 + 22301074 116905518 MODEL JAAIVD010000026;XM_032908541 XP_032764432 centrosomal protein of 170 kDa protein B protein-coding 625960835 LOC116895638 coenzyme Q-binding protein COQ10 homolog B, mitochondrial-like 3 176828631 176829356 + 116895638 MODEL JAAIVD010000012 pseudo 625960836 LOC116906502 U2 spliceosomal RNA 7 102943464 102943638 - 116906502 MODEL JAAIVD010000026 pseudo 625960837 LOC116886902 60S ribosomal protein L21-like 18 24801523 24802010 - 116886902 MODEL JAAIVD010000013 pseudo 625960838 Smim4 small integral membrane protein 4 ENCODES a protein that exhibits mitochondrial ribosome binding (ortholog); INVOLVED IN mitochondrial respiratory chain complex III assembly (ortholog); mitochondrial respiratory chain complex IV assembly (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 13 6823288 6827139 - 116914511 MODEL JAAIVD010000008;XM_032918835 XP_032774726 protein-coding 625960844 LOC116892249 meiosis regulator and mRNA stability factor 1-like 2 160318669 160352160 - 22301074;30032202 116892249 MODEL JAAIVD010000001;XM_032893820 XP_032749711 protein-coding 625960869 LOC116896086 uncharacterized LOC116896086 3 215680068 215681250 + 22301074;30032202 116896086 MODEL JAAIVD010000012;XM_032897064 XP_032752955 uncharacterized protein LOC116896086 protein-coding 625960874 LOC116886579 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like 17 39232075 39232527 - 116886579 MODEL JAAIVD010000011 pseudo 625960875 Rbbp8nl RBBP8 N-terminal like 5 157356024 157362767 - 30032202 116902408 MODEL JAAIVD010000023;XM_032904937 XP_032760828 RBBP8 N-terminal-like protein protein-coding 625960890 LOC116892801 zinc finger protein 54-like 2 185984316 186019571 + 22301074 116892801 MODEL JAAIVD010000001;XM_032894674 XP_032750565 protein-coding 625960900 LOC116894843 U6 spliceosomal RNA 2 100724717 100724823 + 116894843 MODEL JAAIVD010000001;XR_004387058 snrna 625960903 Krt40 keratin 40 9 54367730 54373716 - 22301074;30032202 116909405 MODEL JAAIVD010000002;XM_032912971;XM_032912972 XP_032768862;XP_032768863 keratin, type I cytoskeletal 40 protein-coding 625960913 Krt79 keratin 79 ENCODES a protein that exhibits enzyme binding (ortholog) 1 261138933 261150715 + 22301074;30032202 116890200 MODEL JAAIVD010000025;XM_032890934 XP_032746825 keratin, type II cytoskeletal 79 protein-coding 625960925 Ttc9b tetratricopeptide repeat domain 9B 2 168286987 168289358 - 22301074 116892419 MODEL JAAIVD010000001;XM_032894100 XP_032749991 tetratricopeptide repeat protein 9B protein-coding 625960932 Tor1a torsin family 1 member A ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent protein folding chaperone (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN cell adhesion (ortholog); ERAD pathway (ortholog); intermediate filament cytoskeleton organization (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita-5 (ortholog); Contracture (ortholog); dystonia (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) 5 4649817 4656552 + 22301074;30032202 116901172 MODEL JAAIVD010000023;XM_032902831;XM_032902832 XP_032758722;XP_032758723 torsin-1A protein-coding 625960946 Rhod ras homolog family member D ENCODES a protein that exhibits GTP binding (ortholog); protein kinase binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); actin filament polymerization (ortholog); fibroblast growth factor receptor signaling pathway (ortholog) 2 3218793 3232438 + 22301074;30032202 116890770 MODEL JAAIVD010000001;XM_032891237 XP_032747128 rho-related GTP-binding protein RhoD protein-coding 625960955 LOC116894131 olfactory receptor 52E8-like 2 103955535 103956476 - 22301074 116894131 MODEL JAAIVD010000001;XM_032895850 XP_032751741 protein-coding 625960958 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 7 21612325 21612396 - 116906531 MODEL JAAIVD010000026 trna 625960959 LOC116908259 IQ domain-containing protein F5-like 8 97865850 97867983 - 30032202 116908259 MODEL JAAIVD010000027;XM_032911512 XP_032767403 protein-coding 625960964 Smo smoothened, frizzled class receptor ENCODES a protein that exhibits cholesterol binding (ortholog); G protein-coupled receptor activity (ortholog); oxysterol binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); alpha-tubulin acetylation (ortholog); anterior/posterior pattern specification (ortholog); PARTICIPATES IN altered Hedgehog signaling pathway; Hedgehog signaling pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Adenomatous Polyps (ortholog); ameloblastoma (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); axonal growth cone (ortholog); caveola (ortholog) 6 109801241 109824295 - 22301074;30032202 116904008 A0A8A1UEA2 MODEL JAAIVD010000024;XM_032906824 XP_032762715 smoothened homolog protein-coding 625960980 Rab27a RAB27A, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); blood coagulation (ortholog); complement-dependent cytotoxicity (ortholog); PARTICIPATES IN insulin secretion pathway; ASSOCIATED WITH Chediak-Higashi syndrome (ortholog); Congenital Abnormalities (ortholog); Disease Progression (ortholog); FOUND IN apical plasma membrane (ortholog); dendrite (ortholog); exocytic vesicle (ortholog) 8 67413718 67435525 + 22301074;30032202 116907699 MODEL JAAIVD010000027;XM_032910811 XP_032766702 ras-related protein Rab-27A protein-coding 625960989 LOC116910358 probable E3 ubiquitin-protein ligase MARCH10 9 73701403 73729857 + 22301074 116910358 MODEL JAAIVD010000002;XM_032914212 XP_032770103 protein-coding 625960997 LOC116912051 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2-like 11 89401263 89401828 + 116912051 MODEL JAAIVD010000006 pseudo 625960998 Pdlim1 PDZ and LIM domain 1 ENCODES a protein that exhibits actin binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); establishment or maintenance of actin cytoskeleton polarity (ortholog); fibroblast migration (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); cytoskeleton (ortholog) 2 39352546 39399052 - 30032202 116891147 MODEL JAAIVD010000001;XM_032891898 XP_032747789 PDZ and LIM domain protein 1 protein-coding 625961009 Nt5c3b 5'-nucleotidase, cytosolic IIIB 9 59731754 59744819 - 22301074;30032202 116910622 MODEL JAAIVD010000002;XM_032914571 XP_032770462 7-methylguanosine phosphate-specific 5'-nucleotidase protein-coding 625961022 LOC116897526 small nucleolar RNA SNORA48 3 207040541 207040684 - 116897526 MODEL JAAIVD010000012;XR_004387542 snorna 625961025 Uba1 ubiquitin like modifier activating enzyme 1 ENCODES a protein that exhibits ubiquitin activating enzyme activity (ortholog); INVOLVED IN DNA damage response (ortholog); ASSOCIATED WITH genetic disease (ortholog); squamous cell carcinoma (ortholog); VEXAS syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); desmosome (ortholog) X 3162579 3183986 - 30032202 116888430 MODEL JAAIVD010000014;XM_032889706 XP_032745597 ubiquitin-like modifier-activating enzyme 1 protein-coding 625961056 Tle5 TLE family member 5, transcriptional modulator ENCODES a protein that exhibits identical protein binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH colon cancer (ortholog); Myocardial Ischemia (ortholog); prostate cancer (ortholog); FOUND IN nucleus (ortholog) 1 153325108 153331921 - 22301074;30032202 116904183 MODEL JAAIVD010000025;XM_032907094;XM_032907102 XP_032762985;XP_032762993 TLE family member 5 protein-coding 625961071 Fadd Fas associated via death domain ENCODES a protein that exhibits caspase binding (ortholog); death effector domain binding (ortholog); death receptor binding (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); behavioral response to cocaine (ortholog); PARTICIPATES IN ceramide signaling pathway; FasL mediated signaling pathway; Trail mediated signaling pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome 1 (ortholog); Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); FOUND IN CD95 death-inducing signaling complex (ortholog); cell body (ortholog); cytoplasm (ortholog) 2 5142335 5145109 + 22301074 116890820 MODEL JAAIVD010000001;XM_032891318 XP_032747209 FAS-associated death domain protein protein-coding 625961077 Paox polyamine oxidase ENCODES a protein that exhibits polyamine oxidase activity (ortholog); INVOLVED IN intracellular polyamine homeostasis (ortholog); polyamine catabolic process (ortholog); positive regulation of spermidine biosynthetic process (ortholog); PARTICIPATES IN polyamine metabolic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); lung non-small cell carcinoma (ortholog); stroke (ortholog); FOUND IN peroxisomal matrix (ortholog) 2 61736878 61745408 - 30032202 116891351 MODEL JAAIVD010000001;XM_032892343;XM_032892344 XP_032748234;XP_032748235 peroxisomal N(1)-acetyl-spermine/spermidine oxidase protein-coding 625961089 Stat2 signal transducer and activator of transcription 2 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); defense response to virus (ortholog); negative regulation of type I interferon-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-27 signaling pathway; Jak-Stat signaling pathway; ASSOCIATED WITH Arenaviridae infectious disease (ortholog); Bunyaviridae Infections (ortholog); Chronic Hepatitis B (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 1 155746623 155762131 + 30032202 116905961 MODEL JAAIVD010000025;XM_032908970 XP_032764861 protein-coding 625961117 LOC116909310 olfactory receptor 10-like 9 32091731 32092666 + 22301074 116909310 MODEL JAAIVD010000002;XM_032912850 XP_032768741 protein-coding 625961120 Acvrl1 activin A receptor like type 1 ENCODES a protein that exhibits activin binding (ortholog); activin receptor activity, type I (ortholog); ATP binding (ortholog); INVOLVED IN angiogenesis (ortholog); artery development (ortholog); blood circulation (ortholog); PARTICIPATES IN activin signaling pathway; ASSOCIATED WITH adenosine deaminase deficiency (ortholog); arteriovenous malformation (ortholog); arteriovenous malformations of the brain (ortholog); FOUND IN cell surface (ortholog); dendrite (ortholog); neuronal cell body (ortholog) 1 261949088 261965955 - 22301074;30032202 116883818 MODEL JAAIVD010000025;XM_032885075;XM_032885082;XM_032885091 XP_032740966;XP_032740973;XP_032740982 serine/threonine-protein kinase receptor R3 protein-coding 625961141 Tmc6 transmembrane channel like 6 INVOLVED IN intracellular zinc ion homeostasis (ortholog); protein stabilization (ortholog); ASSOCIATED WITH epidermodysplasia verruciformis (ortholog); Epidermodysplasia Verruciformis 1 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) 9 66288081 66305839 + 30032202 116910341 MODEL JAAIVD010000002;XM_032914197 XP_032770088 transmembrane channel-like protein 6 protein-coding 625961165 Plac8l1 PLAC8 like 1 15 3354913 3371797 - 116884806 MODEL JAAIVD010000010;XM_032886038 XP_032741929 PLAC8-like protein 1 protein-coding 625961173 Tatdn3 TatD DNase domain containing 3 ENCODES a protein that exhibits DNA-(apurinic or apyrimidinic site) endonuclease activity (ortholog); single-stranded DNA 3'-5' DNA exonuclease activity (ortholog); FOUND IN mitochondrion (ortholog) 10 69133711 69148777 - 22301074 116911241 MODEL JAAIVD010000005;XM_032915144 XP_032771035 putative deoxyribonuclease TATDN3 protein-coding 625961187 Ube2d3 ubiquitin conjugating enzyme E2 D3 ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to cadmium ion (ortholog); cellular response to mercury ion (ortholog); positive regulation of protein localization to mitochondrion (ortholog); PARTICIPATES IN altered ubiquitin/proteasome degradation pathway; Alzheimer's disease pathway; nuclear factor kappa B signaling pathway; FOUND IN plasma membrane (ortholog) 3 23618659 23649804 - 30032202 116896224 MODEL JAAIVD010000012;XM_032897279;XM_032897280;XM_032897281 XP_032753170;XP_032753171;XP_032753172 ubiquitin-conjugating enzyme E2 D3 protein-coding 625961205 LOC116913748 olfactory receptor 4K1-like 12 73082236 73083172 + 22301074 116913748 MODEL JAAIVD010000007;XM_032918056 XP_032773947 protein-coding 625961208 LOC116887970 60S ribosomal protein L38-like X 66519057 66520560 + 22301074;30032202 116887970 MODEL JAAIVD010000014;XM_032889409 XP_032745300 protein-coding 625961212 LOC116911580 inactive dipeptidyl peptidase 10-like 10 16488261 16676549 - 116911580 MODEL JAAIVD010000005;XM_032915562 XP_032771453 protein-coding 625961219 LOC116883443 transmembrane emp24 domain-containing protein 2-like 1 200548060 200550640 - 116883443 MODEL JAAIVD010000025 pseudo 625961220 LOC116883956 10 kDa heat shock protein, mitochondrial-like 14 20599728 20617797 - 116883956 MODEL JAAIVD010000009 pseudo 625961221 LOC116910024 T-complex protein 1 subunit zeta-like 9 54518849 54520436 + 116910024 MODEL JAAIVD010000002 pseudo 625961222 Mgrn1 mahogunin ring finger 1 ENCODES a protein that exhibits protein sequestering activity (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN endosome to lysosome transport (ortholog); heart development (ortholog); in utero embryonic development (ortholog); PARTICIPATES IN melanocortin system pathway; ASSOCIATED WITH hyperglycemia (ortholog); hyperinsulinism (ortholog); obesity (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); early endosome (ortholog) 9 16967736 17016963 - 30032202 116909817 MODEL JAAIVD010000002;XM_032913520;XM_032913521;XM_032913523;XM_032913524;XM_032913525;XM_032913526;XM_032913527;XM_032913528;XM_032913529 XP_032769411;XP_032769412;XP_032769414;XP_032769415;XP_032769416;XP_032769417;XP_032769418;XP_032769419;XP_032769420 E3 ubiquitin-protein ligase MGRN1 protein-coding 625961261 Gpn3 GPN-loop GTPase 3 INVOLVED IN protein import into nucleus (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) 16 31466424 31474988 - 30032202 116885398 MODEL JAAIVD010000004;XM_032886678;XM_032886679 XP_032742569;XP_032742570 protein-coding 625961276 Hmgb1 high mobility group box 1 ENCODES a protein that exhibits 5S rRNA binding (ortholog); bent DNA binding (ortholog); C-X-C chemokine binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); activation of innate immune response (ortholog); apoptotic cell clearance (ortholog); PARTICIPATES IN cisplatin drug pathway; mismatch repair pathway; pro-inflammatory cytokine mediated pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); Acute Lung Injury (ortholog); Acute-On-Chronic Liver Failure (ortholog); FOUND IN alphav-beta3 integrin-HMGB1 complex (ortholog); cell surface (ortholog); chromatin (ortholog) 16 4798441 4801625 + 30032202 116885400 MODEL JAAIVD010000004;XM_032886681 XP_032742572 high mobility group protein B1 protein-coding 625961283 LOC116911446 heat shock cognate 71 kDa protein-like 10 21985002 21986851 + 116911446 MODEL JAAIVD010000005 pseudo 625961284 Ankrd46 ankyrin repeat domain 46 1 209996961 210015985 - 22301074 116910594 MODEL JAAIVD010000025;XM_032914523;XM_032914531;XM_032914541 XP_032770414;XP_032770422;XP_032770432 ankyrin repeat domain-containing protein 46 protein-coding 625961299 Ythdc1 YTH N6-methyladenosine RNA binding protein C1 ENCODES a protein that exhibits N6-methyladenosine-containing RNA reader activity (ortholog); RNA binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); dosage compensation by inactivation of X chromosome (ortholog); in utero embryonic development (ortholog); FOUND IN nuclear body (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) 11 112539 143830 - 30032202 116911950 MODEL JAAIVD010000006;XM_032915865;XM_032915866;XM_032915867;XM_032915868;XM_032915869;XM_032915870;XM_032915871 XP_032771756;XP_032771757;XP_032771758;XP_032771759;XP_032771760;XP_032771761;XP_032771762 YTH domain containing 1;YTH domain-containing protein 1 protein-coding 625961337 Rad54l2 RAD54 like 2 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); DNA/RNA helicase activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); R-loop processing (ortholog); transcription elongation by RNA polymerase II (ortholog); FOUND IN chromatin (ortholog); nuclear speck (ortholog); nucleus (ortholog) 8 97985766 98086521 - 22301074;30032202 116907498 MODEL JAAIVD010000027;XM_032910492;XM_032910493;XM_032910494 XP_032766383;XP_032766384;XP_032766385 helicase ARIP4 protein-coding 625961371 Slc13a2 solute carrier family 13 member 2 ENCODES a protein that exhibits alpha-ketoglutarate transmembrane transporter activity (ortholog); fumarate transmembrane transporter activity (ortholog); sodium:dicarboxylate symporter activity (ortholog); INVOLVED IN alpha-ketoglutarate transport (ortholog); cellular response to lithium ion (ortholog); fumarate transport (ortholog); FOUND IN apical plasma membrane (ortholog) 9 92014918 92041622 + 22301074;30032202 116909017 MODEL JAAIVD010000002;XM_032912491;XM_032912493 XP_032768382;XP_032768384 protein-coding 625961389 LOC116899871 U1 spliceosomal RNA 4 151111780 151111941 - 116899871 MODEL JAAIVD010000003;XR_004387865 snrna 625961392 Atp6v1h ATPase H+ transporting V1 subunit H ENCODES a protein that exhibits proton transmembrane transporter activity (ortholog); INVOLVED IN endocytosis (ortholog); synaptic vesicle lumen acidification (ortholog); FOUND IN cytosol (ortholog); extrinsic component of synaptic vesicle membrane (ortholog); membrane (ortholog) 1 140400281 140484174 + 22301074;30032202 116903738 MODEL JAAIVD010000025;XM_032906425;XM_032906433;XM_032906440 XP_032762316;XP_032762324;XP_032762331 V-type proton ATPase subunit H protein-coding 625961414 LOC116899822 small nucleolar RNA SNORA2/SNORA34 family 4 53660169 53660302 - 116899822 MODEL JAAIVD010000003;XR_004387822 snorna 625961417 Tnp1 transition protein 1 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); flagellated sperm motility (ortholog); heterochromatin formation (ortholog); FOUND IN male germ cell nucleus (ortholog); nucleosome (ortholog); nucleus (ortholog) 4 146516184 146516786 - 22301074;30032202 116898215 MODEL JAAIVD010000003;XM_032899574;XM_032899575 XP_032755465;XP_032755466 spermatid nuclear transition protein 1 protein-coding 625961426 LOC116894030 olfactory receptor 52Z1-like 2 102060265 102064614 - 22301074 116894030 MODEL JAAIVD010000001;XM_032895747;XM_032895748 XP_032751638;XP_032751639 protein-coding 625961432 LOC116910759 U4 spliceosomal RNA 9 73495907 73496058 - 116910759 MODEL JAAIVD010000002 pseudo 625961433 LOC116885115 small nucleolar RNA SNORA36 family 15 79225912 79226069 - 116885115 MODEL JAAIVD010000010 pseudo 625961434 LOC116889851 uncharacterized LOC116889851 1 152942259 152944008 + 116889851 MODEL JAAIVD010000025;XR_004386515 ncrna 625961439 Ppp1r18 protein phosphatase 1 regulatory subunit 18 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 18 9076590 9086433 + 22301074 116887472 MODEL JAAIVD010000013;XM_032889082;XM_032889083;XM_032889084 XP_032744973;XP_032744974;XP_032744975 phostensin protein-coding 625961454 Upf2 UPF2 regulator of nonsense mediated mRNA decay ENCODES a protein that exhibits telomeric repeat DNA binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); liver development (ortholog); nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); exon-exon junction complex (ortholog) 14 12285259 12376107 + 22301074;30032202 116884030 MODEL JAAIVD010000009;XM_032885264 XP_032741155 regulator of nonsense transcripts 2 protein-coding 625961476 Aspm assembly factor for spindle microtubules ENCODES a protein that exhibits calmodulin binding (ortholog); INVOLVED IN brain development (ortholog); cerebral cortex development (ortholog); developmental growth (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); autosomal recessive primary microcephaly (ortholog); COVID-19 (ortholog); FOUND IN apical plasma membrane (ortholog); centrosome (ortholog); cytoplasm (ortholog) 10 19816086 19854168 + 22301074 116911237 MODEL JAAIVD010000005;XM_032915137 XP_032771028 abnormal spindle-like microcephaly-associated protein protein-coding 625961502 Notch4 notch receptor 4 ENCODES a protein that exhibits Notch binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN branching involved in blood vessel morphogenesis (ortholog); endothelial cell differentiation (ortholog); endothelial cell morphogenesis (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH AIDS-Associated Nephropathy (ortholog); alopecia areata (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN cell surface (ortholog); cytoplasmic vesicle (ortholog); endoplasmic reticulum (ortholog) 18 7248399 7271499 + 22301074;30032202 116886823 MODEL JAAIVD010000013;XM_032888256 XP_032744147 neurogenic locus notch homolog protein 4 protein-coding 625961536 Pilra paired immunoglobin like type 2 receptor alpha INVOLVED IN signal transduction (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog) 16 16190184 16203968 + 30032202 116885775 MODEL JAAIVD010000004;XM_032887096 XP_032742987 paired immunoglobulin-like type 2 receptor alpha protein-coding 625961547 LOC116912127 ran guanine nucleotide release factor-like 11 34152055 34152612 + 30032202 116912127 MODEL JAAIVD010000006;XM_032916036 XP_032771927 protein-coding 625961550 Galnt18 polypeptide N-acetylgalactosaminyltransferase 18 ENCODES a protein that exhibits polypeptide N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation via N-acetyl-galactosamine (ortholog) 2 89677395 89980849 + 30032202 116891652 MODEL JAAIVD010000001;XM_032892898 XP_032748789 protein-coding 625961565 LOC116911420 ubiquitin-conjugating enzyme E2 variant 1-like 10 78689063 78689506 + 116911420 MODEL JAAIVD010000005;XM_032915385;XM_032915386 XP_032771276;XP_032771277 protein-coding 625961571 Setd3 SET domain containing 3, actin N3(tau)-histidine methyltransferase ENCODES a protein that exhibits histone H3K36 methyltransferase activity (ortholog); histone H3K4 methyltransferase activity (ortholog); protein-L-histidine N-tele-methyltransferase activity (ortholog); INVOLVED IN actin filament organization (ortholog); actin modification (ortholog); peptidyl-histidine methylation (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog) 7 125784620 125850699 - 22301074;30032202 116905447 MODEL JAAIVD010000026;XM_032908397 XP_032764288 SET domain containing 3, actin histidine methyltransferase;actin-histidine N-methyltransferase protein-coding 625961588 Cfap69 cilia and flagella associated protein 69 INVOLVED IN flagellated sperm motility (ortholog); olfactory behavior (ortholog); positive regulation of fertilization (ortholog); ASSOCIATED WITH spermatogenic failure 24 (ortholog); FOUND IN cytoplasm (ortholog); non-motile cilium (ortholog); sperm midpiece (ortholog) 6 137837427 137908247 - 30032202 116904132 MODEL JAAIVD010000024;XM_032907018;XM_032907020;XM_032907021;XM_032907022 XP_032762909;XP_032762911;XP_032762912;XP_032762913 cilia- and flagella-associated protein 69 protein-coding 625961622 LOC116884594 uncharacterized LOC116884594 15 30312436 30350925 - 116884594 MODEL JAAIVD010000010;XR_004385886 ncrna 625961627 Il10ra interleukin 10 receptor subunit alpha ENCODES a protein that exhibits interleukin-10 binding (ortholog); interleukin-10 receptor activity (ortholog); INVOLVED IN interleukin-10-mediated signaling pathway (ortholog); intestinal epithelial structure maintenance (ortholog); negative regulation of autophagy (ortholog); PARTICIPATES IN Interleukin-10 signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); Crohn's disease (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); FOUND IN apical plasma membrane (ortholog); cytosol (ortholog); plasma membrane (ortholog) 8 39788184 39802642 - 22301074 116907772 MODEL JAAIVD010000027;XM_032910913 XP_032766804 interleukin-10 receptor subunit alpha protein-coding 625961638 Slain2 SLAIN motif family member 2 INVOLVED IN cytoplasmic microtubule organization (ortholog); microtubule nucleation (ortholog); positive regulation of microtubule polymerization (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); ciliary tip (ortholog) 11 29719841 29778579 + 30032202 116912861 MODEL JAAIVD010000006;XM_032917075;XM_032917076;XM_032917077 XP_032772966;XP_032772967;XP_032772968 SLAIN motif-containing protein 2 protein-coding 625961656 LOC116885100 U7 small nuclear RNA 15 24179378 24179433 - 116885100 MODEL JAAIVD010000010 pseudo 625961657 LOC116914362 ADP/ATP translocase 2-like 13 74735756 74751169 - 116914362 MODEL JAAIVD010000008 pseudo 625961658 Mettl5 methyltransferase 5, N6-adenosine ENCODES a protein that exhibits rRNA (adenine-N6-)-methyltransferase activity (ortholog); S-adenosyl-L-methionine binding (ortholog); INVOLVED IN positive regulation of translation (ortholog); rRNA methylation (ortholog); rRNA processing (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 72 (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); nucleolus (ortholog) 5 47162474 47174106 - 22301074;30032202 116901491 MODEL JAAIVD010000023;XM_032903460 XP_032759351 methyltransferase like 5;methyltransferase-like protein 5 protein-coding 625961669 LOC116893054 renalase-like 2 33177167 33210680 - 30032202 116893054 MODEL JAAIVD010000001;XM_032895016 XP_032750907 protein-coding 625961675 LOC116884866 protocadherin beta-14-like 15 1133262 1138952 + 22301074 116884866 MODEL JAAIVD010000010;XM_032886105 XP_032741996 protein-coding 625961680 LOC116887759 U6 spliceosomal RNA 18 19588393 19588494 + 116887759 MODEL JAAIVD010000013;XR_004386259 snrna 625961683 Lrrc74b leucine rich repeat containing 74B 4 2796740 2813971 - 22301074 116898644 MODEL JAAIVD010000003;XM_032899870 XP_032755761 leucine-rich repeat-containing protein 74B protein-coding 625961695 LOC116889365 transmembrane protein 256-like X 19320945 19321372 + 116889365 MODEL JAAIVD010000014 pseudo 625961696 Usp3 ubiquitin specific peptidase 3 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); histone binding (ortholog); histone H2A deubiquitinase activity (ortholog); INVOLVED IN DNA repair (ortholog); DNA repair-dependent chromatin remodeling (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; histone modification pathway; ASSOCIATED WITH atrial fibrillation (ortholog); lymphopenia (ortholog); neutropenia (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog) 8 60875693 60948329 - 22301074;30032202 116908034 MODEL JAAIVD010000027;XM_032911303;XM_032911304 XP_032767194;XP_032767195 ubiquitin carboxyl-terminal hydrolase 3 protein-coding 625961718 LOC116898341 Down syndrome cell adhesion molecule homolog 4 47958055 48014096 + 22301074;30032202 116898341 MODEL JAAIVD010000003;XM_032899664 XP_032755555 protein-coding 625961728 LOC116887708 patr class I histocompatibility antigen, A-126 alpha chain-like 18 9606776 9608939 - 116887708 MODEL JAAIVD010000013 pseudo 625961729 Arhgef3 Rho guanine nucleotide exchange factor 3 13 2843602 3125354 + 22301074;30032202 116914384 MODEL JAAIVD010000008;XM_032918596;XM_032918597;XM_032918598;XM_032918599 XP_032774487;XP_032774488;XP_032774489;XP_032774490 protein-coding 625961755 LOC116890450 small nucleolar RNA SNORA16B/SNORA16A family 1 25940426 25940561 - 116890450 MODEL JAAIVD010000025;XR_004386642 snorna 625961758 Otor otoraplin INVOLVED IN cartilage condensation (ortholog) 5 122561584 122564913 + 22301074;30032202 116900658 MODEL JAAIVD010000023;XM_032902363 XP_032758254 protein-coding 625961766 Mosmo modulator of smoothened INVOLVED IN embryonic limb morphogenesis (ortholog); embryonic skeletal system development (ortholog); gene expression (ortholog); FOUND IN ciliary membrane (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) 2 81057583 81116569 - 30032202 116891580 MODEL JAAIVD010000001;XM_032892760 XP_032748651 modulator of smoothened protein protein-coding 625961773 LOC116884104 U2 spliceosomal RNA 14 28114503 28114641 + 116884104 MODEL JAAIVD010000009 pseudo 625961774 LOC116915061 60S ribosomal protein L21-like 13 53056113 53061840 + 116915061 MODEL JAAIVD010000008 pseudo 625961775 LOC116894431 protein FAM32A-like 2 160260568 160260969 + 30032202 116894431 MODEL JAAIVD010000001;XM_032896136 XP_032752027 protein-coding 625961780 Tmem209 transmembrane protein 209 6 109051475 109078406 + 30032202 116904000 MODEL JAAIVD010000024;XM_032906806;XM_032906807;XM_032906808;XM_032906809 XP_032762697;XP_032762698;XP_032762699;XP_032762700 protein-coding 625961807 LOC116888298 kelch domain-containing protein 2-like X 60547266 60548776 + 22301074 116888298 MODEL JAAIVD010000014;XM_032889570 XP_032745461 protein-coding 625961813 Cxcl17 C-X-C motif chemokine ligand 17 ENCODES a protein that exhibits chemoattractant activity (ortholog); chemokine activity (ortholog); INVOLVED IN cell migration (ortholog); chemokine-mediated signaling pathway (ortholog); leukocyte chemotaxis (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN extracellular region (ortholog) 2 169307233 169318493 + 30032202 116892457 MODEL JAAIVD010000001;XM_032894173 XP_032750064 C-X-C motif chemokine 17 protein-coding 625961821 Lrcol1 leucine rich colipase like 1 16 44005016 44016846 - 22301074;30032202 116885659 MODEL JAAIVD010000004;XM_032886963 XP_032742854 leucine-rich colipase-like protein 1 protein-coding 625961831 Gpatch8 G-patch domain containing 8 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN hemopoiesis (ortholog); mRNA splicing, via spliceosome (ortholog) 9 61770988 61849041 - 22301074;30032202 116909879 MODEL JAAIVD010000002;XM_032913618 XP_032769509 G patch domain-containing protein 8 protein-coding 625961843 LOC116907551 PCNA-associated factor-like 8 99202590 99203063 + 116907551 MODEL JAAIVD010000027 pseudo 625961844 E2f1 E2F transcription factor 1 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); INVOLVED IN anoikis (ortholog); cellular response to fatty acid (ortholog); cellular response to hypoxia (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Neoplasms (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nuclear chromosome (ortholog) 5 133928146 133947590 - 22301074;30032202 116901050 MODEL JAAIVD010000023;XM_032902631 XP_032758522 transcription factor E2F1 protein-coding 625961856 LOC116889714 enolase-like 22301074;30032202 116889714 MODEL JAAIVD010000061;XM_032890593 XP_032746484 protein-coding 625961857 LOC116899033 uncharacterized LOC116899033 4 56814764 56831504 + 116899033 MODEL JAAIVD010000003;XR_004387683 ncrna 625961861 Trnan-guu transfer RNA asparagine (anticodon GUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60945866 60945939 - 116897692 MODEL JAAIVD010000012 trna 625961862 LOC116898216 uncharacterized LOC116898216 4 146524760 146525630 + 116898216 MODEL JAAIVD010000003;XR_004387643 ncrna 625961866 LOC116890177 60S ribosomal protein L9-like 1 258945582 258946114 - 116890177 MODEL JAAIVD010000025 pseudo 625961867 B3galt4 beta-1,3-galactosyltransferase 4 ENCODES a protein that exhibits N-acetyl-beta-D-glucosaminide beta-(1,3)-galactosyltransferase activity (ortholog); INVOLVED IN ganglioside biosynthetic process (ortholog) 18 6956313 6957895 - 22301074;30032202 116887072 MODEL JAAIVD010000013;XM_032888577 XP_032744468 protein-coding 625961872 LOC116907180 probable inactive ribonuclease-like protein 13 8 900914 901415 - 116907180 MODEL JAAIVD010000027 pseudo 625961873 LOC116883689 keratin, type II cytoskeletal 75 1 261496617 261505661 + 22301074;30032202 116883689 MODEL JAAIVD010000025;XM_032884906 XP_032740797 protein-coding 625961885 Slc35a3 solute carrier family 35 member A3 ENCODES a protein that exhibits UDP-galactose transmembrane transporter activity (ortholog); INVOLVED IN UDP-N-acetylglucosamine transmembrane transport (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); Arthrogryposis, Impaired Intellectual Development, and Seizures (ortholog); genetic disease (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) 3 43017139 43055965 + 22301074;30032202 116896329 MODEL JAAIVD010000012;XM_032897426;XM_032897427 XP_032753317;XP_032753318 UDP-N-acetylglucosamine transporter protein-coding 625961900 LOC116900468 olfactory receptor 4A5-like 5 71363963 71364883 - 22301074 116900468 MODEL JAAIVD010000023;XM_032902204 XP_032758095 protein-coding 625961903 Usp8 ubiquitin specific peptidase 8 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); K48-linked deubiquitinase activity (ortholog); K63-linked deubiquitinase activity (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cellular response to nerve growth factor stimulus (ortholog); endosome organization (ortholog); PARTICIPATES IN mitochondrial autophagy pathway; ASSOCIATED WITH ACTH-secreting pituitary adenoma (ortholog); esophagus squamous cell carcinoma (ortholog); hereditary spastic paraplegia (ortholog); FOUND IN acrosomal membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) 5 105555495 105593457 + 22301074;30032202 116901919 MODEL JAAIVD010000023;XM_032904140 XP_032760031 ubiquitin carboxyl-terminal hydrolase 8 protein-coding 625961925 Insl5 insulin like 5 INVOLVED IN positive regulation of feeding behavior (ortholog) 1 51554224 51556261 + 116891153 MODEL JAAIVD010000025;XM_032891985 XP_032747876 insulin-like peptide INSL5 protein-coding 625961929 LOC116910702 uncharacterized LOC116910702 1 211304509 211310051 + 22301074 116910702 MODEL JAAIVD010000025;XM_032914584 XP_032770475 uncharacterized protein LOC116910702 protein-coding 625961935 LOC116909385 olfactory receptor 1361-like 9 38268184 38269125 - 22301074;30032202 116909385 MODEL JAAIVD010000002;XM_032912940 XP_032768831 protein-coding 625961938 LOC116902853 olfactory receptor 13 6 97485122 97486054 - 22301074 116902853 MODEL JAAIVD010000024;XM_032905181 XP_032761072 protein-coding 625961941 LOC116894323 prostatic steroid-binding protein C1 2 151398002 151401008 - 116894323 MODEL JAAIVD010000001;XM_032896017 XP_032751908 protein-coding 625961948 Ceacam19 CEA cell adhesion molecule 19 2 170725020 170733421 + 116892514 MODEL JAAIVD010000001;XM_032894269 XP_032750160 carcinoembryonic antigen-related cell adhesion molecule 19 protein-coding 625961959 Znf197 zinc finger protein 197 8 114038624 114052298 + 30032202 116908275 MODEL JAAIVD010000027;XM_032911520 XP_032767411 protein-coding 625961970 LOC116890624 U1 spliceosomal RNA 1 248354377 248354536 + 116890624 MODEL JAAIVD010000025;XR_004386769 snrna 625961973 Ticam1 toll like receptor adaptor molecule 1 ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein kinase binding (ortholog); signaling adaptor activity (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to oxidised low-density lipoprotein particle stimulus (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH Herpes Simplex Encephalitis (ortholog); Herpes Simplex Encephalitis 4 (ortholog); pneumoconiosis (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog); endosome (ortholog) 4 87661536 87664438 - 30032202 116899178 MODEL JAAIVD010000003;XM_032900748 XP_032756639 TIR domain-containing adapter molecule 1 protein-coding 625961978 Styk1 serine/threonine/tyrosine kinase 1 FOUND IN plasma membrane (ortholog) 6 16915728 16928340 + 22301074;30032202 116903182 MODEL JAAIVD010000024;XM_032905552 XP_032761443 tyrosine-protein kinase STYK1 protein-coding 625961991 LOC116889496 small nucleolar RNA SNORA48 X 102864533 102864676 + 116889496 MODEL JAAIVD010000014;XR_004386445 snorna 625961994 Fam131a family with sequence similarity 131 member A 4 5514290 5523916 + 116898703 MODEL JAAIVD010000003;XM_032899974;XM_032899975;XM_032899976;XM_032899977 XP_032755865;XP_032755866;XP_032755867;XP_032755868 protein FAM131A protein-coding 625962014 LOC116888023 glutamic acid-rich protein-like X 80912707 80913272 + 116888023 MODEL JAAIVD010000014;XM_032889432 XP_032745323 protein-coding 625962018 LOC116894596 vomeronasal type-1 receptor 2-like 2 181467333 181468277 - 22301074;30032202 116894596 MODEL JAAIVD010000001;XM_032896313 XP_032752204 protein-coding 625962022 Muc21 mucin 21, cell surface associated INVOLVED IN negative regulation of cell-cell adhesion (ortholog); negative regulation of cell-substrate adhesion (ortholog); FOUND IN plasma membrane (ortholog) 18 8822136 8826046 - 116887593 MODEL JAAIVD010000013;XM_032889216 XP_032745107 mucin-21 protein-coding 625962027 LOC116904673 small nucleolar RNA SNORA70 6 22649125 22649253 + 116904673 MODEL JAAIVD010000024 pseudo 625962028 LOC116897941 olfactory receptor 183-like 4 42979779 42980714 - 22301074;30032202 116897941 MODEL JAAIVD010000003;XM_032899341 XP_032755232 protein-coding 625962032 Percc1 proline and glutamate rich with coiled coil 1 INVOLVED IN digestive tract morphogenesis (ortholog); enteroendocrine cell differentiation (ortholog); ASSOCIATED WITH Diarrhea 11 (ortholog) 9 2437090 2438154 - 116909566 MODEL JAAIVD010000002;XM_032913184 XP_032769075 protein PERCC1 protein-coding 625962036 Met MET proto-oncogene, receptor tyrosine kinase ENCODES a protein that exhibits beta-catenin binding (ortholog); hepatocyte growth factor receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN adult behavior (ortholog); brain development (ortholog); branching morphogenesis of an epithelial tube (ortholog); PARTICIPATES IN altered scatter factor/hepatocyte growth factor signaling pathway; E-cadherin signaling pathway; fibroblast growth factor signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); acute myeloid leukemia (ortholog); FOUND IN basal plasma membrane (ortholog); dendrite (ortholog); excitatory synapse (ortholog) 6 121393392 121472984 - 22301074;30032202 116904060 MODEL JAAIVD010000024;XM_032906920 XP_032762811 hepatocyte growth factor receptor protein-coding 625962059 LOC116900341 probable inactive 1-aminocyclopropane-1-carboxylate synthase-like protein 2 5 68027667 68042371 - 22301074;30032202 116900341 MODEL JAAIVD010000023;XM_032902094 XP_032757985 protein-coding 625962078 Lemd1 LEM domain containing 1 10 3590855 3619909 - 116911357 MODEL JAAIVD010000005;XM_032915277 XP_032771168 LEM domain-containing protein 1 protein-coding 625962087 Pitpnm3 PITPNM family member 3 ENCODES a protein that exhibits calcium ion binding (ortholog); receptor tyrosine kinase binding (ortholog); ASSOCIATED WITH arteriovenous malformations of the brain (ortholog); cone dystrophy (ortholog); cone-rod dystrophy (ortholog); FOUND IN cell body (ortholog) 9 43368636 43456617 + 22301074;30032202 116908565 MODEL JAAIVD010000002;XM_032911768 XP_032767659 membrane-associated phosphatidylinositol transfer protein 3 protein-coding 625962111 LOC116898481 peptidyl-prolyl cis-trans isomerase A-like 4 117084065 117084508 - 116898481 MODEL JAAIVD010000003 pseudo 625962112 Kcnk10 potassium two pore domain channel subfamily K member 10 ENCODES a protein that exhibits mechanosensitive potassium channel activity (ortholog); outward rectifier potassium channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN cellular response to arachidonate (ortholog); memory (ortholog); ASSOCIATED WITH brain ischemia (ortholog); Deafness (ortholog) 7 111599636 111730004 - 22301074;30032202 116905343 MODEL JAAIVD010000026;XM_032908241;XM_032908242;XM_032908243;XM_032908244 XP_032764132;XP_032764133;XP_032764134;XP_032764135 potassium channel subfamily K member 10 protein-coding 625962134 LOC116913000 small nucleolar RNA SNORA17 11 42599726 42599858 + 116913000 MODEL JAAIVD010000006;XR_004389561 snorna 625962137 Habp2 hyaluronan binding protein 2 ENCODES a protein that exhibits peptidase activity (ortholog); INVOLVED IN proteolysis (ortholog); response to bleomycin (ortholog); ASSOCIATED WITH Hereditary Thrombophilia (ortholog); Neoplasm Metastasis (ortholog); pulmonary fibrosis (ortholog) 2 59859355 59893395 - 22301074;30032202 116891337 MODEL JAAIVD010000001;XM_032892268;XM_032892269 XP_032748159;XP_032748160 hyaluronan-binding protein 2 protein-coding 625962159 LOC116897658 U4 spliceosomal RNA 3 1374443 1374584 - 116897658 MODEL JAAIVD010000012;XR_004387623 snrna 625962162 Spo11 SPO11 initiator of meiotic double strand breaks ENCODES a protein that exhibits DNA endonuclease activity (ortholog); INVOLVED IN double-strand break repair involved in meiotic recombination (ortholog); homologous chromosome pairing at meiosis (ortholog); male meiosis I (ortholog); ASSOCIATED WITH spermatogenic failure 3 (ortholog); FOUND IN chromosome, telomeric region (ortholog) 5 144995771 145009714 - 22301074;30032202 116900752 MODEL JAAIVD010000023;XM_032902458;XM_032902459;XM_032902460;XM_032902461 XP_032758349;XP_032758350;XP_032758351;XP_032758352 SPO11 initiator of meiotic double stranded breaks;meiotic recombination protein SPO11 protein-coding 625962186 Prap1 proline rich acidic protein 1 ENCODES a protein that exhibits triglyceride binding (ortholog); INVOLVED IN cellular response to X-ray (ortholog); deactivation of mitotic spindle assembly checkpoint (ortholog); DNA damage response (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog) 2 61772074 61775800 - 116893865 MODEL JAAIVD010000001;XM_032895584 XP_032751475 proline-rich acidic protein 1 protein-coding 625962195 Rab1b RAB1B, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GTP binding (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); establishment of endothelial intestinal barrier (ortholog); Golgi organization (ortholog); ASSOCIATED WITH Myocardial Ischemia (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog) 2 2544524 2552501 + 22301074 116890736 MODEL JAAIVD010000001;XM_032891192 XP_032747083 ras-related protein Rab-1B protein-coding 625962205 LOC116902707 60S ribosomal protein L32-like 6 46613573 46614092 - 22301074;30032202 116902707 MODEL JAAIVD010000024;XM_032905060 XP_032760951 protein-coding 625962210 LOC116913839 cytochrome c oxidase subunit 4 isoform 1, mitochondrial-like 12 22987872 23024628 + 116913839 MODEL JAAIVD010000007 pseudo 625962211 Spin4 spindlin family member 4 ENCODES a protein that exhibits histone H3K4me3 reader activity (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH Lui-Jee-Baron syndrome (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) X 53367397 53369654 + 22301074;30032202 116888673 MODEL JAAIVD010000014;XM_032889972 XP_032745863 spindlin-4 protein-coding 625962216 Shfl shiftless antiviral inhibitor of ribosomal frameshifting ENCODES a protein that exhibits identical protein binding (ortholog); ribosome binding (ortholog); RNA binding (ortholog); INVOLVED IN defense response to virus (ortholog); negative regulation of translational frameshifting (ortholog); negative regulation of viral genome replication (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 8 17136573 17142420 + 30032202 116907094 MODEL JAAIVD010000027;XM_032910061;XM_032910062 XP_032765952;XP_032765953 shiftless antiviral inhibitor of ribosomal frameshifting protein protein-coding 625962233 LOC116892776 aurora kinase B-like 2 183348288 183349431 + 116892776 MODEL JAAIVD010000001 pseudo 625962234 LOC116900170 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like 5 30545016 30545314 - 116900170 MODEL JAAIVD010000023 pseudo 625962235 Gskip GSK3B interacting protein ENCODES a protein that exhibits beta-catenin binding (ortholog); protein kinase A binding (ortholog); protein kinase A regulatory subunit binding (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway in response to oxidative stress (ortholog); negative regulation of protein kinase activity (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH myeloid leukemia (ortholog); myeloid neoplasm (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 7 123345004 123361350 + 30032202 116905439 MODEL JAAIVD010000026;XM_032908380 XP_032764271 GSK3B-interacting protein protein-coding 625962242 LOC116902880 anionic trypsin-2-like 6 99156037 99160148 + 22301074;30032202 116902880 MODEL JAAIVD010000024;XM_032905210 XP_032761101 protein-coding 625962249 LOC116907505 bleomycin hydrolase-like 8 98498619 98501501 - 116907505 MODEL JAAIVD010000027 pseudo 625962250 Zbtb2 zinc finger and BTB domain containing 2 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog) 2 199142167 199161169 - 22301074;30032202 116892890 MODEL JAAIVD010000001;XM_032894798;XM_032894799 XP_032750689;XP_032750690 zinc finger and BTB domain-containing protein 2 protein-coding 625962260 LOC116903526 60S ribosomal protein L21-like 6 57965566 57966050 - 116903526 MODEL JAAIVD010000024 pseudo 625962261 LOC116913722 granzyme C 12 68603043 68605780 + 22301074;30032202 116913722 MODEL JAAIVD010000007;XM_032918026 XP_032773917 protein-coding 625962270 Ube2d1 ubiquitin conjugating enzyme E2 D1 ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN negative regulation of TORC1 signaling (ortholog); positive regulation of protein polyubiquitination (ortholog); positive regulation of protein ubiquitination (ortholog); PARTICIPATES IN p53 signaling pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); protein-containing complex (ortholog) 18 15566115 15599129 + 30032202 116887188 MODEL JAAIVD010000013;XM_032888743 XP_032744634 ubiquitin-conjugating enzyme E2 D1 protein-coding 625962281 Rap1a RAP1A, member of RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cellular response to cAMP (ortholog); cellular response to forskolin (ortholog); PARTICIPATES IN adenosine signaling pathway; E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH Hyperoxaluria (ortholog); Myocardial Reperfusion Injury (ortholog); FOUND IN cell junction (ortholog); cytoplasm (ortholog); dense core granule (ortholog) 3 52327281 52403568 + 22301074;30032202 116896416 MODEL JAAIVD010000012;XM_032897559;XM_032897560 XP_032753450;XP_032753451 ras-related protein Rap-1A protein-coding 625962296 Cpn2 carboxypeptidase N subunit 2 4 15169579 15179151 - 22301074;30032202 116897848 MODEL JAAIVD010000003;XM_032899259 XP_032755150 protein-coding 625962301 Gsk3b glycogen synthase kinase 3 beta ENCODES a protein that exhibits ATP binding (ortholog); beta-catenin binding (ortholog); dynactin binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); autosome genomic imprinting (ortholog); axonogenesis (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; glycogen biosynthetic pathway; Hedgehog signaling pathway; ASSOCIATED WITH Aberrant Crypt Foci (ortholog); acute kidney failure (ortholog); acute myocardial infarction (ortholog); FOUND IN axon (ortholog); beta-catenin destruction complex (ortholog); cell body (ortholog) 4 23051613 23200719 + 22301074;30032202 116898838 MODEL JAAIVD010000003;XM_032900191;XM_032900192 XP_032756082;XP_032756083 glycogen synthase kinase-3 beta protein-coding 625962320 LOC116884036 60S ribosomal protein L29-like 14 18011002 18011505 - 116884036 MODEL JAAIVD010000009 pseudo 625962321 C4bpb complement component 4 binding protein beta INVOLVED IN negative regulation of complement activation, classical pathway (ortholog); positive regulation of protein catabolic process (ortholog); regulation of opsonization (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); FOUND IN extracellular region (ortholog) 10 5137198 5147905 + 116911645 MODEL JAAIVD010000005;XM_032915602;XM_032915603 XP_032771493;XP_032771494 C4b-binding protein beta chain protein-coding 625962334 Usp34 ubiquitin specific peptidase 34 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); cysteine-type endopeptidase activity (ortholog); INVOLVED IN positive regulation of canonical Wnt signaling pathway (ortholog); protein K48-linked deubiquitination (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); chromosome 2p16.1-p15 deletion syndrome (ortholog) 11 93440490 93628778 - 22301074;30032202 116911952 MODEL JAAIVD010000006;XM_032915874 XP_032771765 ubiquitin carboxyl-terminal hydrolase 34 protein-coding 625962418 LOC116890801 aldehyde dehydrogenase family 3 member B1 2 3722176 3736686 + 22301074;30032202 116890801 MODEL JAAIVD010000001;XM_032891283 XP_032747174 protein-coding 625962432 Abhd12b abhydrolase domain containing 12B 7 83838802 83869658 + 30032202 116906119 MODEL JAAIVD010000026;XM_032909118 XP_032765009 protein ABHD12B protein-coding 625962448 Qsox1 quiescin sulfhydryl oxidase 1 ENCODES a protein that exhibits FAD binding (ortholog); flavin-dependent sulfhydryl oxidase activity (ortholog); protein disulfide isomerase activity (ortholog); INVOLVED IN extracellular matrix assembly (ortholog); negative regulation of macroautophagy (ortholog); ASSOCIATED WITH substance-related disorder (ortholog); VACTERL association (ortholog); FOUND IN extracellular exosome (ortholog); extracellular region (ortholog); Golgi apparatus (ortholog) 10 35189589 35227365 - 30032202 116911178 MODEL JAAIVD010000005;XM_032915041;XM_032915042 XP_032770932;XP_032770933 sulfhydryl oxidase 1 protein-coding 625962470 Ggt5 gamma-glutamyltransferase 5 ENCODES a protein that exhibits glutathione gamma-glutamate hydrolase (ortholog); leukotriene-C(4) hydrolase activity (ortholog); peptidyltransferase activity (ortholog); INVOLVED IN amino acid metabolic process (ortholog); fatty acid metabolic process (ortholog); glutathione catabolic process (ortholog); ASSOCIATED WITH Lung Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) 18 11829780 11855917 - 22301074 116887076 MODEL JAAIVD010000013;XM_032888582 XP_032744473 glutathione hydrolase 5 proenzyme protein-coding 625962485 Slc39a10 solute carrier family 39 member 10 ENCODES a protein that exhibits protein tyrosine phosphatase activator activity (ortholog); zinc ion transmembrane transporter activity (ortholog); INVOLVED IN epithelial to mesenchymal transition (ortholog); intracellular zinc ion homeostasis (ortholog); negative regulation of B cell apoptotic process (ortholog); ASSOCIATED WITH Neoplasm Invasiveness (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog) 4 128112434 128160890 + 22301074;30032202 116899383 MODEL JAAIVD010000003;XM_032901101;XM_032901102 XP_032756992;XP_032756993 zinc transporter ZIP10 protein-coding 625962504 Prr30 proline rich 30 7 23122501 23124293 + 116905552 MODEL JAAIVD010000026;XM_032908583 XP_032764474 proline-rich protein 30 protein-coding 625962509 Ccdc125 coiled-coil domain containing 125 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); negative regulation of cell motility (ortholog); negative regulation of Rho protein signal transduction (ortholog); FOUND IN cytoplasm (ortholog) 3 158049955 158075054 + 30032202 116897097 MODEL JAAIVD010000012;XM_032898738;XM_032898739;XM_032898740 XP_032754629;XP_032754630;XP_032754631 coiled-coil domain-containing protein 125 protein-coding 625962531 LOC116895386 60S ribosomal protein L21-like 3 56926542 56927025 - 116895386 MODEL JAAIVD010000012 pseudo 625962532 Gk glycerol kinase ENCODES a protein that exhibits glycerol kinase activity (ortholog); histone binding (ortholog); INVOLVED IN glucose homeostasis (ortholog); glycerol metabolic process (ortholog); glycerol-3-phosphate biosynthetic process (ortholog); PARTICIPATES IN D-glycericacidemia pathway; familial lipoprotein lipase deficiency pathway; glycerol kinase deficiency pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); Experimental Liver Cirrhosis (ortholog); familial hypercholesterolemia (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleus (ortholog) X 16047342 16123579 - 22301074;30032202 116889013 MODEL JAAIVD010000014;XM_032890222 XP_032746113 protein-coding 625962557 Cd300lf CD300 molecule like family member f ENCODES a protein that exhibits ceramide binding (ortholog); identical protein binding (ortholog); interleukin-4 receptor binding (ortholog); INVOLVED IN interleukin-13-mediated signaling pathway (ortholog); negative regulation of apoptotic cell clearance (ortholog); negative regulation of mast cell activation (ortholog) 9 68966742 68982760 + 30032202 116909547 MODEL JAAIVD010000002;XM_032913164 XP_032769055 CMRF35-like molecule 1 protein-coding 625962568 Rps6ka1 ribosomal protein S6 kinase A1 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); kinase activity (ortholog); mitogen-activated protein kinase binding (ortholog); INVOLVED IN hepatocyte proliferation (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of TOR signaling (ortholog); PARTICIPATES IN adenosine signaling pathway; fibroblast growth factor signaling pathway; mTOR signaling pathway; ASSOCIATED WITH alcohol-related birth defects (ortholog); fetal alcohol spectrum disorder (ortholog); Sezary's disease (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); nucleoplasm (ortholog) 1 24344718 24384104 + 22301074;30032202 116894962 MODEL JAAIVD010000025;XM_032896507;XM_032896508;XM_032896509 XP_032752398;XP_032752399;XP_032752400 ribosomal protein S6 kinase alpha-1 protein-coding 625962600 LOC116893587 retinoic acid early-inducible protein 1-beta-like 2 229472909 229484013 + 116893587 MODEL JAAIVD010000001;XM_032895285 XP_032751176 protein-coding 625962606 LOC116902257 zinc finger protein 709-like 5 142673930 142677232 + 116902257 MODEL JAAIVD010000023;XM_032904676 XP_032760567 protein-coding 625962613 Taf6 TATA-box binding protein associated factor 6 ENCODES a protein that exhibits aryl hydrocarbon receptor binding (ortholog); DNA binding (ortholog); RNA polymerase II general transcription initiation factor activity (ortholog); INVOLVED IN DNA-templated transcription initiation (ortholog); mRNA transcription by RNA polymerase II (ortholog); negative regulation of cell cycle (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Alazami-Yuan Syndrome (ortholog); Cornelia de Lange syndrome 1 (ortholog); Developmental Disabilities (ortholog); FOUND IN MLL1 complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 16 15550517 15556246 - 22301074;30032202 116885191 MODEL JAAIVD010000004;XM_032886410 XP_032742301 transcription initiation factor TFIID subunit 6 protein-coding 625962631 LOC116889910 olfactory receptor 6C3-like 1 160363271 160364209 + 22301074;30032202 116889910 MODEL JAAIVD010000025;XM_032890730 XP_032746621 protein-coding 625962634 Haus8 HAUS augmin like complex subunit 8 INVOLVED IN centrosome cycle (ortholog); spindle assembly (ortholog); FOUND IN centrosome (ortholog); HAUS complex (ortholog); mitotic spindle microtubule (ortholog) 13 13726444 13740720 + 116914734 MODEL JAAIVD010000008;XM_032919170 XP_032775061 HAUS augmin-like complex subunit 8 protein-coding 625962649 Echdc2 enoyl-CoA hydratase domain containing 2 FOUND IN mitochondrion (ortholog) 1 46664930 46678444 - 30032202 116887501 MODEL JAAIVD010000025;XM_032889123;XM_032889132 XP_032745014;XP_032745023 enoyl-CoA hydratase domain-containing protein 2, mitochondrial protein-coding 625962667 Ola1 Obg like ATPase 1 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN ATP metabolic process (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 5 50443082 50559795 - 22301074;30032202 116901515 MODEL JAAIVD010000023;XM_032903490 XP_032759381 obg-like ATPase 1 protein-coding 625962682 LOC116890472 small nucleolar RNA SNORA28 1 208139658 208139780 - 116890472 MODEL JAAIVD010000025;XR_004386661 snorna 625962685 Panx3 pannexin 3 ENCODES a protein that exhibits calcium channel activity (ortholog); gap junction hemi-channel activity (ortholog); INVOLVED IN cell-cell signaling (ortholog); osteoblast differentiation (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); gap junction (ortholog); plasma membrane (ortholog) 8 33822211 33831029 - 30032202 116907518 MODEL JAAIVD010000027;XM_032910520 XP_032766411 pannexin-3 protein-coding 625962693 LOC116890152 thymosin beta-10-like 1 250968401 250968545 + 22301074;30032202 116890152 MODEL JAAIVD010000025;XM_032890886 XP_032746777 protein-coding 625962697 LOC116898317 60S ribosomal protein L31-like 4 39466964 39467278 - 22301074;30032202 116898317 MODEL JAAIVD010000003;XM_032899656 XP_032755547 protein-coding 625962700 LOC116890407 U6 spliceosomal RNA 1 170085425 170085528 + 116890407 MODEL JAAIVD010000025;XR_004386609 snrna 625962703 LOC116897494 small nucleolar RNA SNORD47 3 50204833 50204909 - 116897494 MODEL JAAIVD010000012;XR_004387515 snorna 625962706 Fgfr2 fibroblast growth factor receptor 2 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); fibroblast growth factor receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN angiogenesis (ortholog); animal organ morphogenesis (ortholog); axonogenesis (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH Acneiform Eruptions (ortholog); acrocephalosyndactylia (ortholog); adenoid cystic carcinoma (ortholog); FOUND IN cell cortex (ortholog); cell surface (ortholog); cytoplasm (ortholog) 2 71804261 71905167 + 22301074;30032202;7803853 116891425 Q63710 MODEL JAAIVD010000001;XM_032892466;XM_032892467;XM_032892468;XM_032892469;XM_032892470;XM_032892471;XM_032892472;XM_032892473;XM_032892474;XM_032892475;XM_032892476;XM_032892477;XM_032892478;Z35137;Z35138;Z35139 CAA84510;CAA84511;XP_032748357;XP_032748358;XP_032748359;XP_032748360;XP_032748361;XP_032748362;XP_032748363;XP_032748364;XP_032748365;XP_032748366;XP_032748367;XP_032748368;XP_032748369 fibroblast growth factor receptor 2b, keratinocyte growth factor receptor protein-coding 625962745 Kcnc2 potassium voltage-gated channel subfamily C member 2 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); transmembrane transporter binding (ortholog); voltage-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); INVOLVED IN action potential (ortholog); cellular response to ammonium ion (ortholog); cellular response to nitric oxide (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy (ortholog); developmental and epileptic encephalopathy 103 (ortholog); epilepsy (ortholog); FOUND IN apical plasma membrane (ortholog); axolemma (ortholog); axon (ortholog) 1 190413118 190579293 + 1378392;22301074;30032202 116908953 MODEL JAAIVD010000025;X62839;XM_032912416;XM_032912423;XM_032912431;XM_032912439;XM_032912448 CAA44643;XP_032768307;XP_032768314;XP_032768322;XP_032768330;XP_032768339 voltage-gated potassium channel protein-coding 625962769 LOC116897709 60S ribosomal protein L17-like 4 25929228 25929698 - 116897709 MODEL JAAIVD010000003 pseudo 625962770 Hspa4l heat shock protein family A (Hsp70) member 4 like ENCODES a protein that exhibits ATP binding (ortholog); INVOLVED IN protein folding (ortholog); response to unfolded protein (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 3 113038342 113091019 - 22301074;30032202 116895886 MODEL JAAIVD010000012;XM_032896978 XP_032752869 heat shock 70 kDa protein 4L protein-coding 625962794 LOC116893282 glycylpeptide N-tetradecanoyltransferase 1-like 1 65281068 65282474 - 116893282 MODEL JAAIVD010000025 pseudo 625962795 Hsf1 heat shock transcription factor 1 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to angiotensin (ortholog); cellular response to cadmium ion (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); Cardiomegaly (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 248809178 248834596 + 22301074 116913153 MODEL JAAIVD010000025;XM_032917365;XM_032917368;XM_032917372;XM_032917376;XM_032917379 XP_032773256;XP_032773259;XP_032773263;XP_032773267;XP_032773270 heat shock factor protein 1 protein-coding 625962820 Muc15 mucin 15, cell surface associated 5 89000196 89006217 + 116901735 MODEL JAAIVD010000023;XM_032903872 XP_032759763 mucin-15 protein-coding 625962827 LOC116912141 uncharacterized LOC116912141 1 238226121 238229624 + 116912141 MODEL JAAIVD010000025;XR_004389426 ncrna 625962832 LOC116892639 N-lysine methyltransferase KMT5A-like 2 176380898 176381998 + 22301074 116892639 MODEL JAAIVD010000001;XM_032894459 XP_032750350 protein-coding 625962837 Isca1 iron-sulfur cluster assembly 1 INVOLVED IN protein maturation (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; ASSOCIATED WITH multiple mitochondrial dysfunctions syndrome (ortholog); multiple mitochondrial dysfunctions syndrome 5 (ortholog); FOUND IN mitochondrial [4Fe-4S] assembly complex (ortholog); mitochondrion (ortholog) 14 78360631 78373651 + 22301074;30032202 116883814 MODEL JAAIVD010000009;XM_032885064 XP_032740955 iron-sulfur cluster assembly 1 homolog, mitochondrial protein-coding 625962845 Cnn2 calponin 2 INVOLVED IN cellular response to mechanical stimulus (ortholog); hemopoiesis (ortholog); negative regulation of cell migration (ortholog); ASSOCIATED WITH Pulmonary Atresia (ortholog); renal cell carcinoma (ortholog); FOUND IN stress fiber (ortholog) 1 154881318 154888143 - 22301074 116905465 MODEL JAAIVD010000025;XM_032908433 XP_032764324 calponin-2 protein-coding 625962856 LOC116887814 protein phosphatase 1A-like X 30778482 30802854 - 116887814 MODEL JAAIVD010000014 pseudo 625962857 Tor1aip2 torsin 1A interacting protein 2 ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); INVOLVED IN endoplasmic reticulum organization (ortholog); positive regulation of ATP-dependent activity (ortholog); protein localization to nuclear envelope (ortholog); FOUND IN endoplasmic reticulum (ortholog) 10 35461819 35474007 + 116911691 MODEL JAAIVD010000005;XM_032915648;XM_032915649 XP_032771539;XP_032771540 torsin-1A-interacting protein 2 protein-coding 625962867 LOC116906933 olfactory receptor 150-like 8 82622653 82623588 + 22301074;30032202 116906933 MODEL JAAIVD010000027;XM_032909858 XP_032765749 protein-coding 625962870 LOC116890518 small nucleolar RNA SNORA17 1 108019385 108019516 - 116890518 MODEL JAAIVD010000025;XR_004386700 snorna 625962873 Mre11 MRE11 double strand break repair nuclease ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); 3'-5'-DNA exonuclease activity (ortholog); DNA binding (ortholog); INVOLVED IN chromosome organization (ortholog); DNA damage response (ortholog); DNA double-strand break processing (ortholog); PARTICIPATES IN altered p53 signaling pathway; ataxia telangiectasia-mutated (ATM) signaling pathway; homologous recombination pathway of double-strand break repair; ASSOCIATED WITH Alzheimer's disease (ortholog); Animal Disease Models (ortholog); Ataxia Telangiectasia Like Disorder (ortholog); FOUND IN chromatin (ortholog); chromosome, telomeric region (ortholog); condensed nuclear chromosome (ortholog) 8 10581117 10627710 + 22301074;30032202 116906631 MODEL JAAIVD010000027;XM_032909389;XM_032909390;XM_032909391 XP_032765280;XP_032765281;XP_032765282 MRE11 homolog, double strand break repair nuclease;double-strand break repair protein MRE11 protein-coding 625962903 LOC116891411 F-box/WD repeat-containing protein 11-like 2 70791938 70793618 + 116891411 MODEL JAAIVD010000001 pseudo 625962904 LOC116887451 uncharacterized LOC116887451 18 8461885 8462560 - 116887451 MODEL JAAIVD010000013;XR_004386218 ncrna 625962908 LOC116890535 small nucleolar RNA SNORA17 1 150167787 150167917 + 116890535 MODEL JAAIVD010000025;XR_004386716 snorna 625962911 Dbi diazepam binding inhibitor, acyl-CoA binding protein ENCODES a protein that exhibits benzodiazepine receptor binding (ortholog); fatty-acyl-CoA binding (ortholog); identical protein binding (ortholog); INVOLVED IN behavioral fear response (ortholog); cellular response to nutrient (ortholog); conditioned place preference (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); alcohol withdrawal syndrome (ortholog); FOUND IN contractile muscle fiber (ortholog); endoplasmic reticulum (ortholog); extracellular region (ortholog) 10 12688608 12697086 - 22301074;30032202 116911228 MODEL JAAIVD010000005;XM_032915129 XP_032771020 acyl-CoA-binding protein protein-coding 625962919 Srd5a3 steroid 5 alpha-reductase 3 ENCODES a protein that exhibits 3-oxo-5-alpha-steroid 4-dehydrogenase (NADP+) activity (ortholog); oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor (ortholog); polyprenal reductase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); dolichyl monophosphate biosynthetic process (ortholog); ASSOCIATED WITH autistic disorder (ortholog); cone dystrophy (ortholog); congenital disorder of glycosylation (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 11 32887195 32900856 + 30032202 116912603 MODEL JAAIVD010000006;XM_032916726;XM_032916727 XP_032772617;XP_032772618 polyprenol reductase protein-coding 625962933 LOC116907012 olfactory receptor 150-like 8 82718246 82719181 + 22301074;30032202 116907012 MODEL JAAIVD010000027;XM_032909948 XP_032765839 protein-coding 625962936 LOC116898388 c-Myc-binding protein-like 4 73846800 73847127 + 116898388 MODEL JAAIVD010000003 pseudo 625962937 LOC116890478 small nucleolar RNA SNORA61 1 25939213 25939342 - 116890478 MODEL JAAIVD010000025;XR_004386667 snorna 625962940 LOC116900267 olfactory receptor 1030 5 63276891 63277847 + 22301074;30032202 116900267 MODEL JAAIVD010000023;XM_032902019 XP_032757910 protein-coding 625962943 LOC116903780 taste receptor type 2 member 124-like 6 16526519 16541287 + 116903780 MODEL JAAIVD010000024 pseudo 625962944 LOC116913179 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A 12 58476727 58481677 + 116913179 MODEL JAAIVD010000007 pseudo 625962945 LOC116899795 U7 small nuclear RNA 4 78459068 78459130 + 116899795 MODEL JAAIVD010000003;XR_004387800 snrna 625962948 Ddx25 DEAD-box helicase 25 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); RNA binding (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); regulation of translation (ortholog); spermatid development (ortholog); ASSOCIATED WITH azoospermia (ortholog); FOUND IN chromatoid body (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 31080742 31097315 - 22301074;30032202 116907430 MODEL JAAIVD010000027;XM_032910398 XP_032766289 ATP-dependent RNA helicase DDX25 protein-coding 625962964 Znf7 zinc finger protein 7 1 249214620 249221019 + 30032202 116913427 MODEL JAAIVD010000025;XM_032917617;XM_032917626;XM_032917635 XP_032773508;XP_032773517;XP_032773526 protein-coding 625962978 Ucp2 uncoupling protein 2 ENCODES a protein that exhibits antiporter activity (ortholog); chloride transmembrane transporter activity (ortholog); GDP binding (ortholog); INVOLVED IN C4-dicarboxylate transport (ortholog); cellular response to amino acid starvation (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); Animal Mammary Neoplasms (ortholog); Brain Injuries (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) 2 98793685 98799910 + 22301074;30032202 116891740 MODEL JAAIVD010000001;XM_032893046 XP_032748937 mitochondrial uncoupling protein 2 protein-coding 625962990 LOC116914178 U6 spliceosomal RNA 12 17954259 17954362 - 116914178 MODEL JAAIVD010000007;XR_004389721 snrna 625962993 Tmem235 transmembrane protein 235 FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog) 9 66195051 66199936 - 30032202 116909439 MODEL JAAIVD010000002;XM_032913014 XP_032768905 protein-coding 625963001 Bloc1s1 biogenesis of lysosomal organelles complex 1 subunit 1 ENCODES a protein that exhibits protein-lysine-acetyltransferase activity (ortholog); INVOLVED IN aerobic respiration (ortholog); anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); FOUND IN BLOC-1 complex (ortholog); BORC complex (ortholog); cytosol (ortholog) 1 156396667 156400283 - 30032202 116906617 MODEL JAAIVD010000025;XM_032909378 XP_032765269 biogenesis of lysosome-related organelles complex 1 subunit 1 protein-coding 625963009 LOC116890588 small nucleolar RNA SNORA17 1 212140525 212140720 - 116890588 MODEL JAAIVD010000025 pseudo 625963010 LOC116895571 uncharacterized LOC116895571 3 134420529 134424521 + 116895571 MODEL JAAIVD010000012;XR_004387290 ncrna 625963014 Serpinc1 serpin family C member 1 ENCODES a protein that exhibits heparin binding (ortholog); identical protein binding (ortholog); protease binding (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); lactation (ortholog); response to nutrient (ortholog); PARTICIPATES IN coagulation cascade pathway; enoxaparin pharmacodynamics pathway; fondaparinux pharmacodynamics pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Acute Experimental Pancreatitis (ortholog); acute kidney failure (ortholog); FOUND IN extracellular region (ortholog) 10 40270506 40285507 + 22301074;30032202 116911141 MODEL JAAIVD010000005;XM_032914993 XP_032770884 antithrombin-III protein-coding 625963024 LOC116889287 low molecular weight phosphotyrosine protein phosphatase-like X 7793950 7794589 - 116889287 MODEL JAAIVD010000014 pseudo 625963025 LOC116888030 developmental pluripotency-associated protein 5A-like X 83295792 83296152 - 116888030 MODEL JAAIVD010000014 pseudo 625963026 Rer1 retention in endoplasmic reticulum sorting receptor 1 ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); INVOLVED IN maintenance of protein localization in endoplasmic reticulum (ortholog); neuromuscular junction development (ortholog); positive regulation of protein localization to plasma membrane (ortholog); FOUND IN cell surface (ortholog); cis-Golgi network (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) 1 5634702 5647146 + 30032202 116892036 MODEL JAAIVD010000025;XM_032893501 XP_032749392 protein RER1 protein-coding 625963037 LOC116886849 5'-nucleotidase domain-containing protein 1 18 36087467 36109319 + 30032202 116886849 MODEL JAAIVD010000013;XM_032888301 XP_032744192 protein-coding 625963047 LOC116905885 40S ribosomal protein S21-like 7 29142237 29142456 + 116905885 MODEL JAAIVD010000026 pseudo 625963048 Ankrd49 ankyrin repeat domain 49 INVOLVED IN positive regulation of DNA-templated transcription (ortholog) 8 10576317 10581114 - 22301074 116906632 MODEL JAAIVD010000027;XM_032909392 XP_032765283 ankyrin repeat domain-containing protein 49 protein-coding 625963055 LOC116887057 sodium/glucose cotransporter 1-like 18 11440879 11496011 - 22301074;30032202 116887057 MODEL JAAIVD010000013;XM_032888546;XM_032888548 XP_032744437;XP_032744439 protein-coding 625963076 LOC116909215 angiogenic factor with G patch and FHA domains 1-like 9 7730686 7748998 - 116909215 MODEL JAAIVD010000002 pseudo 625963077 LOC116904309 proteasome subunit alpha type-3-like 6 52471033 52471553 + 116904309 MODEL JAAIVD010000024 pseudo 625963078 LOC116893000 GTP-binding protein SAR1a 2 221906923 221907613 + 22301074;30032202 116893000 MODEL JAAIVD010000001;XM_032894962 XP_032750853 protein-coding 625963083 Itm2a integral membrane protein 2A INVOLVED IN plasma cell differentiation (ortholog); ASSOCIATED WITH COVID-19 (ortholog) X 64301715 64307691 + 30032202 116888983 MODEL JAAIVD010000014;XM_032890203 XP_032746094 protein-coding 625963093 Chchd2 coiled-coil-helix-coiled-coil-helix domain containing 2 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); positive regulation of mitochondrial ATP synthesis coupled electron transport (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); Parkinson's disease 22 (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrion (ortholog); nucleus (ortholog) 16 24130126 24136056 + 30032202 116885675 MODEL JAAIVD010000004;XM_032886982 XP_032742873 coiled-coil-helix-coiled-coil-helix domain-containing protein 2 protein-coding 625963101 LOC116894884 U6 spliceosomal RNA 2 34213141 34213247 - 116894884 MODEL JAAIVD010000001;XR_004387093 snrna 625963104 Fzr1 fizzy and cell division cycle 20 related 1 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); lens fiber cell differentiation (ortholog); mitotic G2 DNA damage checkpoint signaling (ortholog); ASSOCIATED WITH autistic disorder (ortholog); developmental and epileptic encephalopathy 109 (ortholog); Developmental Disabilities (ortholog); FOUND IN nuclear membrane (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 153513081 153525664 + 22301074;30032202 116904303 MODEL JAAIVD010000025;XM_032907223 XP_032763114 fizzy-related protein homolog protein-coding 625963122 LOC116889793 40S ribosomal protein S12-like 22301074;30032202 116889793 MODEL JAAIVD010000388;XM_032890643 XP_032746534 protein-coding 625963123 LOC116907757 mortality factor 4-like protein 1 8 12633133 12634926 + 116907757 MODEL JAAIVD010000027 pseudo 625963124 Mplkip M-phase specific PLK1 interacting protein ASSOCIATED WITH genetic disease (ortholog); nonphotosensitive trichothiodystrophy 4 (ortholog); photosensitive trichothiodystrophy 1 (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); midbody (ortholog) 14 36696636 36699027 - 30032202 116883629 MODEL JAAIVD010000009;XM_032884819 XP_032740710 M-phase-specific PLK1-interacting protein protein-coding 625963131 LOC116904262 peptidyl-prolyl cis-trans isomerase A-like 6 37644281 37644769 - 116904262 MODEL JAAIVD010000024 pseudo 625963132 Prrc2a proline rich coiled-coil 2A ASSOCIATED WITH Transplant Rejection (ortholog); type 1 diabetes mellitus (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 18 7747464 7762736 - 30032202 116886917 MODEL JAAIVD010000013;XM_032888396 XP_032744287 protein PRRC2A protein-coding 625963166 LOC116894044 olfactory receptor 52K1-like 2 102546402 102547355 + 22301074 116894044 MODEL JAAIVD010000001;XM_032895764 XP_032751655 protein-coding 625963169 Trnad-guc transfer RNA aspartic acid (anticodon GUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 10 50241475 50241546 - 116911919 MODEL JAAIVD010000005 trna 625963170 Fbxo38 F-box protein 38 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN positive regulation of neuron projection development (ortholog); positive regulation of T cell activation (ortholog); positive regulation of T cell mediated immune response to tumor cell (ortholog); ASSOCIATED WITH autosomal dominant distal hereditary motor neuronopathy 2 (ortholog); autosomal dominant distal hereditary motor neuronopathy 6 (ortholog); Charcot-Marie-Tooth disease (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) X 6624264 6671057 + 22301074;30032202 116888237 MODEL JAAIVD010000014;XM_032889528 XP_032745419 F-box only protein 38 protein-coding 625963196 LOC116896107 choline-phosphate cytidylyltransferase A-like 3 536693 537779 + 116896107 MODEL JAAIVD010000012 pseudo 625963197 Trnap-cgg transfer RNA proline (anticodon CGG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 48632464 48632535 + 116910799 MODEL JAAIVD010000002 trna 625963198 Adck2 aarF domain containing kinase 2 INVOLVED IN regulation of ubiquinone biosynthetic process (ortholog); ASSOCIATED WITH mitochondrial myopathy (ortholog); FOUND IN mitochondrion (ortholog) 6 100211053 100224103 - 30032202 116903928 MODEL JAAIVD010000024;XM_032906698;XM_032906699 XP_032762589;XP_032762590 uncharacterized aarF domain-containing protein kinase 2 protein-coding 625963213 Rab3b RAB3B, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP-dependent protein binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); peptidyl-cysteine methylation (ortholog); positive regulation of dopamine uptake involved in synaptic transmission (ortholog); FOUND IN cytoplasm (ortholog); dopaminergic synapse (ortholog); perinuclear region of cytoplasm (ortholog) 1 45908429 45976456 - 22301074;30032202 116899042 MODEL JAAIVD010000025;XM_032900510 XP_032756401 ras-related protein Rab-3B protein-coding 625963222 LOC116913536 uncharacterized LOC116913536 12 19543709 19544334 - 116913536 MODEL JAAIVD010000007;XR_004389628 ncrna 625963226 Vldlr very low density lipoprotein receptor ENCODES a protein that exhibits apolipoprotein binding (ortholog); calcium-dependent protein binding (ortholog); cargo receptor activity (ortholog); INVOLVED IN cellular response to glucose starvation (ortholog); cellular response to hypoxia (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN altered Reelin signaling pathway; Reelin signaling pathway; ASSOCIATED WITH age related macular degeneration 1 (ortholog); Alzheimer's disease (ortholog); amenorrhea (ortholog); FOUND IN apical part of cell (ortholog); cell surface (ortholog); extracellular region (ortholog) 2 27230627 27262383 + 22301074 116891060 MODEL JAAIVD010000001;XM_032891755;XM_032891756;XM_032891757 XP_032747646;XP_032747647;XP_032747648 very low-density lipoprotein receptor protein-coding 625963253 LOC116896029 chondroitin sulfate proteoglycan 4-like 3 183414224 183466274 - 116896029 MODEL JAAIVD010000012;XM_032897035 XP_032752926 protein-coding 625963266 Fxyd3 FXYD domain containing ion transport regulator 3 ENCODES a protein that exhibits ATPase binding (ortholog); INVOLVED IN regulation of catalytic activity (ortholog); ASSOCIATED WITH diastolic heart failure (ortholog); pancreatic cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 2 164953524 164960991 + 22301074;30032202 116892289 MODEL JAAIVD010000001;XM_032893889;XM_032893890 XP_032749780;XP_032749781 FXYD domain-containing ion transport regulator 3 protein-coding 625963283 Sec24a SEC24 homolog A, COPII component ENCODES a protein that exhibits zinc ion binding (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); COPII-coated vesicle cargo loading (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH progressive muscular atrophy (ortholog); FOUND IN COPII vesicle coat (ortholog) 9 34274642 34345680 - 22301074;30032202 116910249 MODEL JAAIVD010000002;XM_032914140 XP_032770031 SEC24 homolog A, COPII coat complex component;protein transport protein Sec24A protein-coding 625963310 LOC116910956 voltage-dependent anion-selective channel protein 1-like 10 83565545 83566410 - 116910956 MODEL JAAIVD010000005 pseudo 625963311 Gdpd3 glycerophosphodiester phosphodiesterase domain containing 3 ENCODES a protein that exhibits phosphatidylcholine lysophospholipase A1 activity (ortholog); phosphoric diester hydrolase activity (ortholog); INVOLVED IN N-acylethanolamine metabolic process (ortholog); phosphatidylcholine catabolic process (ortholog); phospholipid metabolic process (ortholog); ASSOCIATED WITH lipid storage disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); perinuclear region of cytoplasm (ortholog) 2 75121375 75131347 - 22301074;30032202 116893903 MODEL JAAIVD010000001;XM_032895627 XP_032751518 lysophospholipase D GDPD3 protein-coding 625963325 LOC116906358 small nucleolar RNA SNORD113/SNORD114 family 7 127246082 127246156 + 116906358 MODEL JAAIVD010000026;XR_004388629 snorna 625963328 Fign fidgetin, microtubule severing factor ASSOCIATED WITH Developmental Disease (ortholog); FOUND IN nuclear matrix (ortholog) 5 41517899 41639322 - 22301074;30032202 116901457 MODEL JAAIVD010000023;XM_032903398;XM_032903399;XM_032903400 XP_032759289;XP_032759290;XP_032759291 fidgetin protein-coding 625963339 LOC116906973 replication factor C subunit 4-like 8 19111767 19112868 + 22301074;30032202 116906973 MODEL JAAIVD010000027;XM_032909893 XP_032765784 protein-coding 625963343 KEG97_t15 tRNA-Gly MT 9376 9442 + 64988253 trna 625963344 LOC116896025 nucleolar protein 16-like 3 182939720 182940354 + 116896025 MODEL JAAIVD010000012 pseudo 625963345 LOC116895185 peptidyl-prolyl cis-trans isomerase FKBP3-like 3 173143707 173144319 - 116895185 MODEL JAAIVD010000012 pseudo 625963346 LOC116893567 igE-binding protein-like 2 218083215 218087680 - 22301074 116893567 MODEL JAAIVD010000001;XM_032895273 XP_032751164 protein-coding 625963352 LOC116902913 small nuclear ribonucleoprotein G-like 6 109864954 109865195 + 116902913 MODEL JAAIVD010000024 pseudo 625963353 LOC116894707 dynactin subunit 3-like 2 226062320 226063126 + 22301074;30032202 116894707 MODEL JAAIVD010000001;XM_032896402 XP_032752293 protein-coding 625963358 Dusp4 dual specificity phosphatase 4 ENCODES a protein that exhibits MAP kinase serine/threonine phosphatase activity (ortholog); MAP kinase tyrosine/serine/threonine phosphatase activity (ortholog); phosphatase activity (ortholog); INVOLVED IN dephosphorylation (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); protein dephosphorylation (ortholog); ASSOCIATED WITH systemic juvenile rheumatoid arthritis (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 13 52212878 52224760 - 22301074;30032202 116914661 MODEL JAAIVD010000008;XM_032919063 XP_032774954 dual specificity protein phosphatase 4 protein-coding 625963366 LOC116890338 U6 spliceosomal RNA 1 269511395 269511502 + 116890338 MODEL JAAIVD010000025;XR_004386560 snrna 625963369 Mmrn2 multimerin 2 ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell migration involved in sprouting angiogenesis (ortholog); negative regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) 13 10147626 10169968 + 22301074;30032202 116914819 MODEL JAAIVD010000008;XM_032919276 XP_032775167 multimerin-2 protein-coding 625963380 LOC116910323 alpha-enolase-like 9 54740334 54741757 - 116910323 MODEL JAAIVD010000002 pseudo 625963381 Map3k11 mitogen-activated protein kinase kinase kinase 11 ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); JUN kinase kinase kinase activity (ortholog); INVOLVED IN cell cycle G1/S phase transition (ortholog); JNK cascade (ortholog); MAPK cascade (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; p38 MAPK signaling pathway; Reelin signaling pathway; FOUND IN centriolar satellite (ortholog); centrosome (ortholog); cytosol (ortholog) 2 1992919 2006335 - 22301074;30032202 116890703 MODEL JAAIVD010000001;XM_032891133 XP_032747024 protein-coding 625963395 LOC116886232 acylcarnitine hydrolase-like 17 24823440 24837654 + 30032202 116886232 MODEL JAAIVD010000011;XM_032887638;XM_032887639 XP_032743529;XP_032743530 cocaine esterase-like protein-coding 625963414 Slc7a3 solute carrier family 7 member 3 ENCODES a protein that exhibits basic amino acid transmembrane transporter activity (ortholog); L-arginine transmembrane transporter activity (ortholog); L-lysine transmembrane transporter activity (ortholog); INVOLVED IN L-arginine import across plasma membrane (ortholog); L-arginine transmembrane transport (ortholog); L-lysine import across plasma membrane (ortholog); FOUND IN plasma membrane (ortholog) X 59442239 59448314 + 22301074;30032202 116889135 MODEL JAAIVD010000014;XM_032890308 XP_032746199 cationic amino acid transporter 3 protein-coding 625963430 LOC116912353 vesicle-associated membrane protein 712-like 11 10167714 10204908 + 22301074;30032202 116912353 MODEL JAAIVD010000006;XM_032916407 XP_032772298 protein-coding 625963440 LOC116910640 U6 spliceosomal RNA 9 48865970 48866074 + 116910640 MODEL JAAIVD010000002;XR_004389178 snrna 625963443 LOC116885105 small nucleolar RNA SNORA72 15 7604852 7604983 + 116885105 MODEL JAAIVD010000010;XR_004385970 snorna 625963446 LOC116888097 prohibitin-like X 97811653 97812642 + 116888097 MODEL JAAIVD010000014 pseudo 625963447 Lipe lipase E, hormone sensitive type ENCODES a protein that exhibits diacylglycerol lipase activity (ortholog); hydrolase activity, acting on ester bonds (ortholog); lipase activity (ortholog); INVOLVED IN cellular response to cold (ortholog); diacylglycerol catabolic process (ortholog); ether lipid metabolic process (ortholog); ASSOCIATED WITH arteriosclerosis (ortholog); familial partial lipodystrophy (ortholog); familial partial lipodystrophy type 6 (ortholog); FOUND IN cytosol (ortholog); extracellular region (ortholog); lipid droplet (ortholog) 2 169321701 169337729 + 22301074;30032202 116892458 MODEL JAAIVD010000001;XM_032894174 XP_032750065 hormone-sensitive lipase protein-coding 625963461 LOC116893422 vomeronasal type-1 receptor 1-like 2 174744833 174745786 - 22301074;30032202 116893422 MODEL JAAIVD010000001;XM_032895199 XP_032751090 protein-coding 625963464 LOC116900562 olfactory receptor 4F6-like 5 90133197 90134135 + 22301074 116900562 MODEL JAAIVD010000023;XM_032902287 XP_032758178 protein-coding 625963467 LOC116893316 60S ribosomal protein L7a-like 2 152331293 152350981 - 116893316 MODEL JAAIVD010000001 pseudo 625963468 LOC116889127 sequestosome-1-like X 78558600 78559845 + 116889127 MODEL JAAIVD010000014 pseudo 625963469 LOC116895370 60S ribosomal protein L31-like 3 51309833 51310267 - 22301074;30032202 116895370 MODEL JAAIVD010000012;XM_032896667 XP_032752558 protein-coding 625963474 Rps27 ribosomal protein S27 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN ribosomal small subunit biogenesis (ortholog); rRNA processing (ortholog); translation at postsynapse (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Diamond-Blackfan anemia 17 (ortholog); FOUND IN cytosol (ortholog); cytosolic ribosome (ortholog); cytosolic small ribosomal subunit (ortholog) 3 63429695 63430998 + 22301074;30032202 116896621 MODEL JAAIVD010000012;XM_032897884 XP_032753775 40S ribosomal protein S27 protein-coding 625963482 LOC116909441 heat shock cognate 71 kDa protein-like 9 85418732 85420623 + 22301074;30032202 116909441 MODEL JAAIVD010000002;XM_032913020 XP_032768911 protein-coding 625963487 B3gnt2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 ENCODES a protein that exhibits N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN poly-N-acetyllactosamine biosynthetic process (ortholog); ASSOCIATED WITH Graves' disease (ortholog); rheumatoid arthritis (ortholog) 11 94050354 94074639 + 22301074;30032202 116912413 MODEL JAAIVD010000006;XM_032916476;XM_032916477 XP_032772367;XP_032772368 N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding 625963496 Foxf2 forkhead box F2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN embryonic camera-type eye morphogenesis (ortholog); embryonic digestive tract development (ortholog); establishment of planar polarity of embryonic epithelium (ortholog); ASSOCIATED WITH stroke (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 14 50646220 50651589 + 30032202 116883458 MODEL JAAIVD010000009;XM_032884605 XP_032740496 forkhead box protein F2 protein-coding 625963501 LOC116897589 small nucleolar RNA SNORA17 3 142834811 142834941 - 116897589 MODEL JAAIVD010000012;XR_004387592 snorna 625963504 Atpaf2 ATP synthase mitochondrial F1 complex assembly factor 2 ENCODES a protein that exhibits protein folding chaperone (ortholog); INVOLVED IN mitochondrial proton-transporting ATP synthase complex assembly (ortholog); ASSOCIATED WITH microcephaly (ortholog); mitochondrial complex V (ATP synthase) deficiency nuclear type 1 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); nuclear speck (ortholog) 9 68363520 68371714 + 30032202 116909353 MODEL JAAIVD010000002;XM_032912900;XM_032912901 XP_032768791;XP_032768792 protein-coding 625963518 Itga11 integrin subunit alpha 11 ENCODES a protein that exhibits collagen binding (ortholog); collagen binding involved in cell-matrix adhesion (ortholog); collagen receptor activity (ortholog); INVOLVED IN cell adhesion mediated by integrin (ortholog); cell-matrix adhesion (ortholog); collagen-activated signaling pathway (ortholog); PARTICIPATES IN altered integrin mediated signaling pathway; integrin mediated signaling pathway; pancreatic cancer pathway; ASSOCIATED WITH genetic disease (ortholog); pancreatic cancer (ortholog); FOUND IN focal adhesion (ortholog); integrin alpha11-beta1 complex (ortholog) 8 56899486 57006415 - 22301074;30032202 116907718 MODEL JAAIVD010000027;XM_032910844 XP_032766735 integrin alpha-11 protein-coding 625963552 Sult4a1 sulfotransferase family 4A member 1 ENCODES a protein that exhibits identical protein binding (ortholog); sulfotransferase activity (ortholog); INVOLVED IN dendrite arborization (ortholog); sulfur compound metabolic process (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) 1 253476877 253501482 - 22301074;30032202 116914495 MODEL JAAIVD010000025;XM_032918812;XM_032918820 XP_032774703;XP_032774711 sulfotransferase 4A1 protein-coding 625963568 LOC116900242 olfactory receptor 998-like 5 62942117 62943061 + 22301074;30032202 116900242 MODEL JAAIVD010000023;XM_032901993 XP_032757884 protein-coding 625963571 Nrxn1 neurexin 1 ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); calcium channel regulator activity (ortholog); calcium ion binding (ortholog); INVOLVED IN adult behavior (ortholog); AMPA selective glutamate receptor signaling pathway (ortholog); calcium-dependent cell-cell adhesion (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); CHROMOSOME 2p16.3 DELETION SYNDROME (ortholog); FOUND IN axonal growth cone (ortholog); cell surface (ortholog); endocytic vesicle (ortholog) 7 1683267 2787164 + 116905096 MODEL JAAIVD010000026;XM_032907818;XM_032907819;XM_032907820;XM_032907821;XM_032907823;XM_032907824;XM_032907825;XM_032907826 XP_032763709;XP_032763710;XP_032763711;XP_032763712;XP_032763714;XP_032763715;XP_032763716;XP_032763717 neurexin-1 protein-coding 625963617 LOC116914013 uncharacterized LOC116914013 12 70038282 70039667 - 116914013 MODEL JAAIVD010000007;XR_004389651 ncrna 625963622 LOC116903550 uncharacterized LOC116903550 6 59758813 59780080 - 116903550 MODEL JAAIVD010000024;XR_004388284;XR_004388285 ncrna 625963630 Casp6 caspase 6 ENCODES a protein that exhibits cysteine-type endopeptidase activity (ortholog); endopeptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); acute inflammatory response to non-antigenic stimulus (ortholog); axonal fasciculation (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); brain ischemia (ortholog); Breast Neoplasms (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) 3 29390643 29399252 - 22301074;30032202 116896261 MODEL JAAIVD010000012;XM_032897336;XM_032897337 XP_032753227;XP_032753228 caspase-6 protein-coding 625963644 Fbxo7 F-box protein 7 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein kinase binding (ortholog); ubiquitin binding (ortholog); INVOLVED IN autophagy of mitochondrion (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of cyclin-dependent protein serine/threonine kinase activity (ortholog); PARTICIPATES IN Parkinson's disease pathway; ASSOCIATED WITH genetic disease (ortholog); Parkinson's disease (ortholog); Parkinson's disease 15 (ortholog); FOUND IN classical Lewy body (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 162550608 162578941 - 30032202 116907294 MODEL JAAIVD010000025;XM_032910246 XP_032766137 F-box only protein 7 protein-coding 625963657 Abcg4 ATP binding cassette subfamily G member 4 ENCODES a protein that exhibits ABC-type sterol transporter activity (ortholog); ATP hydrolysis activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to high density lipoprotein particle stimulus (ortholog); cellular response to leukemia inhibitory factor (ortholog); cholesterol efflux (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytoplasmic vesicle (ortholog); endosome (ortholog); endosome membrane (ortholog) 8 38830626 38846090 - 22301074;30032202 116907059 MODEL JAAIVD010000027;XM_032910014;XM_032910015;XM_032910016 XP_032765905;XP_032765906;XP_032765907 ATP-binding cassette sub-family G member 4 protein-coding 625963682 LOC116900433 leukocyte elastase inhibitor A-like 5 70672357 70673029 - 116900433 MODEL JAAIVD010000023 pseudo 625963683 Ubp1 upstream binding protein 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN angiogenesis (ortholog); negative regulation of viral transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 8 104796419 104841578 + 22301074;30032202 116907807 MODEL JAAIVD010000027;XM_032910978;XM_032910979;XM_032910980;XM_032910981;XM_032910983;XM_032910984;XM_032910985;XM_032910986 XP_032766869;XP_032766870;XP_032766871;XP_032766872;XP_032766874;XP_032766875;XP_032766876;XP_032766877 upstream-binding protein 1 protein-coding 625963724 Hoxb1 homeobox B1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); protein domain specific binding (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); anatomical structure morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); ASSOCIATED WITH Craniofacial Abnormalities (ortholog); genetic disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN nucleoplasm (ortholog) 9 58016958 58018343 - 22301074;30032202 116910070 MODEL JAAIVD010000002;XM_032913885 XP_032769776 homeobox protein Hox-B1 protein-coding 625963729 LOC116898523 small integral membrane protein 7-like 4 138339414 138350706 - 116898523 MODEL JAAIVD010000003;XM_032899747 XP_032755638 protein-coding 625963733 Adamts16 ADAM metallopeptidase with thrombospondin type 1 motif 16 INVOLVED IN branching involved in ureteric bud morphogenesis (ortholog); male gamete generation (ortholog); regulation of cilium assembly (ortholog); ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); cryptorchidism (ortholog); hypertension (ortholog) 2 202098035 202222544 - 22301074;30032202 116892911 MODEL JAAIVD010000001;XM_032894833 XP_032750724 A disintegrin and metalloproteinase with thrombospondin motifs 16 protein-coding 625963760 LOC116893387 carcinoembryonic antigen-related cell adhesion molecule 6-like 2 169866347 169884071 - 30032202 116893387 MODEL JAAIVD010000001;XM_032895182 XP_032751073 protein-coding 625963769 Trnag-gcc transfer RNA glycine (anticodon GCC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 48718988 48719058 - 116910838 MODEL JAAIVD010000002 trna 625963770 LOC116892087 zinc finger protein 431-like 2 151798546 151800786 + 116892087 MODEL JAAIVD010000001;XM_032893562 XP_032749453 protein-coding 625963777 Notch2 notch receptor 2 ENCODES a protein that exhibits enzyme binding (ortholog); NF-kappaB binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN activation of protein kinase B activity (ortholog); animal organ morphogenesis (ortholog); atrial septum morphogenesis (ortholog); PARTICIPATES IN Notch signaling pathway; Notch signaling pathway; ASSOCIATED WITH Acroosteolysis Dominant Type (ortholog); Alagille syndrome (ortholog); ALAGILLE SYNDROME 2 (ortholog); FOUND IN cell surface (ortholog); cilium (ortholog); glutamatergic synapse (ortholog) 3 59166637 59301042 - 22301074;30032202 116896483 MODEL JAAIVD010000012;XM_032897648 XP_032753539 neurogenic locus notch homolog protein 2 protein-coding 625963815 Gatd1 glutamine amidotransferase class 1 domain containing 1 2 8072009 8077188 + 116890872 MODEL JAAIVD010000001;XM_032891453 XP_032747344 glutamine amidotransferase like class 1 domain containing 1;glutamine amidotransferase-like class 1 domain-containing protein 1 protein-coding 625963827 Slc48a1 solute carrier family 48 member 1 ENCODES a protein that exhibits heme binding (ortholog); heme transmembrane transporter activity (ortholog); INVOLVED IN heme export (ortholog); heme export from vacuole to cytoplasm (ortholog); heme metabolic process (ortholog); FOUND IN cytoplasm (ortholog); endolysosome (ortholog); endosome membrane (ortholog) 1 270599223 270607269 + 22301074;30032202 116884582 MODEL JAAIVD010000025;XM_032885727 XP_032741618 heme transporter HRG1 protein-coding 625963834 Sparcl1 SPARC like 1 INVOLVED IN regulation of synapse organization (ortholog); synaptic membrane adhesion (ortholog); ASSOCIATED WITH corneal dystrophy (ortholog); endometriosis (ortholog); epilepsy (ortholog); FOUND IN extracellular matrix of synaptic cleft (ortholog); glutamatergic synapse (ortholog) 11 14142463 14174036 - 22301074;30032202 116912207 MODEL JAAIVD010000006;XM_032916154 XP_032772045 SPARC-like protein 1 protein-coding 625963849 Mpzl2 myelin protein zero like 2 INVOLVED IN cell-cell adhesion (ortholog); T cell differentiation in thymus (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 111 (ortholog); genetic disease (ortholog); FOUND IN plasma membrane (ortholog) 8 39574247 39585157 + 22301074;30032202 116906900 MODEL JAAIVD010000027;XM_032909811 XP_032765702 myelin protein zero-like protein 2 protein-coding 625963859 Spop speckle type BTB/POZ protein ENCODES a protein that exhibits identical protein binding (ortholog); molecular function inhibitor activity (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN glucose homeostasis (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); obsolete negative regulation of DNA-binding transcription factor activity (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH colorectal cancer (ortholog); Ductal Carcinoma (ortholog); Endometrial Neoplasms (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); nuclear speck (ortholog); nucleus (ortholog) 9 58892793 58973074 - 30032202 116910597 MODEL JAAIVD010000002;XM_032914521;XM_032914522;XM_032914524;XM_032914525;XM_032914526 XP_032770412;XP_032770413;XP_032770415;XP_032770416;XP_032770417 speckle-type POZ protein protein-coding 625963882 LOC116895054 small nucleolar RNA SNORA17 2 163462725 163462839 - 116895054 MODEL JAAIVD010000001 pseudo 625963883 C18H6orf47 chromosome 18 C6orf47 homolog 18 7725412 7727774 + 116887248 MODEL JAAIVD010000013;XM_032888815 XP_032744706 uncharacterized protein C6orf47 homolog protein-coding 625963890 LOC116893713 aflatoxin B1 aldehyde reductase member 2 1 18880711 18889336 - 116893713 MODEL JAAIVD010000025;XM_032895431 XP_032751322 protein-coding 625963901 Mrpl52 mitochondrial ribosomal protein L52 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 12 70570224 70572848 - 22301074;30032202 116913702 MODEL JAAIVD010000007;XM_032917998 XP_032773889 39S ribosomal protein L52, mitochondrial protein-coding 625963909 LOC116892785 zinc finger protein 420-like 2 185635265 185658099 - 30032202 116892785 MODEL JAAIVD010000001;XM_032894658 XP_032750549 protein-coding 625963918 Slc35e3 solute carrier family 35 member E3 1 195840597 195852419 - 30032202 116909315 MODEL JAAIVD010000025;XM_032912854;XR_004389066 XP_032768745 protein-coding 625963930 Ttc14 tetratricopeptide repeat domain 14 3 120010277 120023645 - 22301074 116896950 MODEL JAAIVD010000012;XM_032898518;XM_032898519;XM_032898520 XP_032754409;XP_032754410;XP_032754411 tetratricopeptide repeat protein 14 protein-coding 625963948 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92632289 92632360 + 116904860 MODEL JAAIVD010000024 trna 625963949 Znf385b zinc finger protein 385B ENCODES a protein that exhibits p53 binding (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); FOUND IN fibrillar center (ortholog); nucleus (ortholog) 5 54749623 55050958 - 22301074;30032202 116901554 MODEL JAAIVD010000023;XM_032903544;XM_032903545;XM_032903546;XM_032903547;XM_032903549;XM_032903550 XP_032759435;XP_032759436;XP_032759437;XP_032759438;XP_032759440;XP_032759441 protein-coding 625963976 Adipor1 adiponectin receptor 1 ENCODES a protein that exhibits adipokinetic hormone receptor activity (ortholog); adiponectin binding (ortholog); identical protein binding (ortholog); INVOLVED IN adiponectin-activated signaling pathway (ortholog); fatty acid oxidation (ortholog); glucose homeostasis (ortholog); PARTICIPATES IN adiponectin signaling pathway; ASSOCIATED WITH breast cancer (ortholog); Diabetic Cardiomyopathies (ortholog); end stage renal disease (ortholog); FOUND IN plasma membrane (ortholog) 10 1270888 1289697 - 30032202 116911127 MODEL JAAIVD010000005;XM_032914974;XM_032914975 XP_032770865;XP_032770866 adiponectin receptor protein 1 protein-coding 625963993 Ccnf cyclin F ENCODES a protein that exhibits anaphase-promoting complex binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN negative regulation of centrosome duplication (ortholog); placenta development (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); frontotemporal dementia (ortholog); Frontotemporal Dementia and/or Amyotrophic Lateral Sclerosis-5 (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); cytosol (ortholog) 9 1518089 1544406 - 22301074;30032202 116909745 MODEL JAAIVD010000002;XM_032913424 XP_032769315 cyclin-F protein-coding 625964014 LOC116885805 hepatic lectin-like 16 2155815 2158545 - 116885805 MODEL JAAIVD010000004;XM_032887138 XP_032743029 protein-coding 625964025 LOC116902767 40S ribosomal protein S2 1 118936617 118937576 + 22301074;30032202 116902767 MODEL JAAIVD010000025;XM_032905113;XM_032905118 XP_032761004;XP_032761009 protein-coding 625964035 LOC116894705 60S ribosomal protein L17-like 2 225010922 225011392 - 116894705 MODEL JAAIVD010000001 pseudo 625964036 LOC116895544 sentrin-specific protease 2-like 3 121171523 121173266 + 30032202 116895544 MODEL JAAIVD010000012;XM_032896787 XP_032752678 protein-coding 625964039 Krt13 keratin 13 INVOLVED IN cellular response to retinoic acid (ortholog); cytoskeleton organization (ortholog); regulation of translation in response to stress (ortholog); ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); genetic disease (ortholog); Genetic Skin Diseases (ortholog); FOUND IN extracellular exosome (ortholog); intermediate filament cytoskeleton (ortholog); keratin filament (ortholog) 9 54865604 54869778 - 22301074;30032202 116908854 MODEL JAAIVD010000002;XM_032912293 XP_032768184 keratin, type I cytoskeletal 13 protein-coding 625964050 Adam9 ADAM metallopeptidase domain 9 ENCODES a protein that exhibits collagen binding (ortholog); integrin binding (ortholog); laminin binding (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); cell adhesion (ortholog); cell adhesion mediated by integrin (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); cervix uteri carcinoma in situ (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell surface (ortholog); cytoplasm (ortholog) 13 61442803 61525097 + 22301074;30032202 116914298 MODEL JAAIVD010000008;XM_032918540 XP_032774431 disintegrin and metalloproteinase domain-containing protein 9 protein-coding 625964077 Amot angiomotin ENCODES a protein that exhibits angiostatin binding (ortholog); identical protein binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); blood vessel endothelial cell migration (ortholog); blood vessel morphogenesis (ortholog); ASSOCIATED WITH Brain Neoplasms (ortholog); Cerebral Visual Impairment and Intellectual Disability (ortholog); FOUND IN actin filament (ortholog); bicellular tight junction (ortholog); cell junction (ortholog) 1 99030708 99080644 - 30032202 116901855 MODEL JAAIVD010000025;XM_032904053 XP_032759944 protein-coding 625964094 LOC116908160 Down syndrome cell adhesion molecule-like protein 1 homolog 8 39964853 39985166 + 116908160 MODEL JAAIVD010000027;XM_032911460 XP_032767351 protein-coding 625964100 Swap70 switching B cell complex subunit SWAP70 ENCODES a protein that exhibits ATP binding (ortholog); DNA binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); isotype switching (ortholog); negative regulation of actin filament depolymerization (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); nucleus (ortholog) 2 91170145 91230853 - 30032202 116891663 MODEL JAAIVD010000001;XM_032892913 XP_032748804 switch-associated protein 70 protein-coding 625964116 LOC116894558 T-cell-interacting, activating receptor on myeloid cells protein 1-like 2 178128707 178140523 - 30032202 116894558 MODEL JAAIVD010000001;XM_032896269 XP_032752160 protein-coding 625964124 Cnot4 CCR4-NOT transcription complex subunit 4 ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN protein autoubiquitination (ortholog); regulation of megakaryocyte differentiation (ortholog); ubiquitin-dependent protein catabolic process (ortholog); FOUND IN CCR4-NOT complex (ortholog) 6 104524035 104625924 + 22301074;30032202 116903967 MODEL JAAIVD010000024;XM_032906763;XM_032906764;XM_032906765;XM_032906766;XM_032906767;XM_032906768 XP_032762654;XP_032762655;XP_032762656;XP_032762657;XP_032762658;XP_032762659 protein-coding 625964148 LOC116897373 5S ribosomal RNA 3 52308584 52308702 + 116897373 MODEL JAAIVD010000012 pseudo 625964149 LOC116887609 alpha/beta hydrolase domain-containing protein 17C-like 18 9522897 9525712 + 116887609 MODEL JAAIVD010000013 pseudo 625964150 Asrgl1 asparaginase and isoaspartyl peptidase 1 ENCODES a protein that exhibits asparaginase activity (ortholog); beta-aspartyl-peptidase activity (ortholog); N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity (ortholog); INVOLVED IN L-asparagine catabolic process (ortholog); obsolete L-asparagine catabolic process via L-aspartate (ortholog); PARTICIPATES IN Canavan disease pathway; ASSOCIATED WITH allergic contact dermatitis (ortholog); fundus dystrophy (ortholog); FOUND IN cytoplasm (ortholog); photoreceptor inner segment (ortholog) 2 8811681 8832799 + 22301074 116890907 MODEL JAAIVD010000001;XM_032891526 XP_032747417 isoaspartyl peptidase/L-asparaginase protein-coding 625964160 LOC116890095 solute carrier family 22 member 22-like 1 231176828 231200699 + 22301074;30032202 116890095 MODEL JAAIVD010000025;XM_032890845 XP_032746736 protein-coding 625964172 LOC116895122 U4 spliceosomal RNA 2 204031670 204031812 + 116895122 MODEL JAAIVD010000001;XR_004387267 snrna 625964175 LOC116883522 histone H2B type 1-C/E/F/G/I 14 41928104 41930582 - 22301074;30032202 116883522 MODEL JAAIVD010000009;XM_032884694 XP_032740585 protein-coding 625964180 Defb119 defensin beta 119 ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); INVOLVED IN innate immune response (ortholog); ASSOCIATED WITH female reproductive system disease (ortholog) 5 131898435 131905037 - 22301074;30032202 116900699 MODEL JAAIVD010000023;XM_032902402 XP_032758293 beta-defensin 119 protein-coding 625964186 KEG97_t11 tRNA-Tyr MT 5249 5314 - 64988244 trna 625964187 Ache acetylcholinesterase (Cartwright blood group) ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholinesterase activity (ortholog); cholinesterase activity (ortholog); INVOLVED IN acetylcholine catabolic process (ortholog); acetylcholine metabolic process (ortholog); acetylcholine receptor signaling pathway (ortholog); PARTICIPATES IN acetylcholine metabolic pathway; acetylcholine signaling pathway via muscarinic acetylcholine receptor; acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH acute stress disorder (ortholog); Alzheimer's disease (ortholog); amphetamine abuse (ortholog); FOUND IN axolemma (ortholog); axon (ortholog); basement membrane (ortholog) 16 16737713 16744049 - 30032202 116885201 MODEL JAAIVD010000004;XM_032886431;XM_032886432;XM_032886433 XP_032742322;XP_032742323;XP_032742324 acetylcholinesterase protein-coding 625964205 Epb41 erythrocyte membrane protein band 4.1 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); actin binding (ortholog); phosphoprotein binding (ortholog); INVOLVED IN positive regulation of protein localization to cell cortex (ortholog); protein-containing complex assembly (ortholog); regulation of calcium ion transport (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Elliptocytosis 1 (ortholog); genetic disease (ortholog); hemolytic anemia (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell cortex (ortholog); cortical cytoskeleton (ortholog) 1 26172737 26331303 + 22301074;30032202 116895635 MODEL JAAIVD010000025;XM_032896843;XM_032896847;XM_032896852;XM_032896859;XM_032896865;XM_032896870;XM_032896874;XM_032896881;XM_032896883;XM_032896890 XP_032752734;XP_032752738;XP_032752743;XP_032752750;XP_032752756;XP_032752761;XP_032752765;XP_032752772;XP_032752774;XP_032752781 protein 4.1 protein-coding 625964245 LOC116910651 U7 small nuclear RNA 9 56515578 56515621 + 116910651 MODEL JAAIVD010000002 pseudo 625964246 Nkap NFKB activating protein ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); INVOLVED IN granulocyte differentiation (ortholog); hematopoietic stem cell proliferation (ortholog); hemopoiesis (ortholog); ASSOCIATED WITH DEVELOPMENTAL DELAY, IMPAIRED GROWTH, DYSMORPHIC FACIES, AND AXONAL NEUROPATHY (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (ortholog) X 103305333 103327547 + 22301074;30032202 116888558 MODEL JAAIVD010000014;XM_032889864 XP_032745755 NF-kappa-B-activating protein protein-coding 625964259 Spsb4 splA/ryanodine receptor domain and SOCS box containing 4 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN positive regulation of protein polyubiquitination (ortholog); protein ubiquitination (ortholog); regulation of circadian rhythm (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog) 8 88392017 88462914 - 22301074;30032202 116907621 MODEL JAAIVD010000027;XM_032910676 XP_032766567 SPRY domain-containing SOCS box protein 4 protein-coding 625964266 LOC116900089 transcription factor Sp3-like 5 17431778 17505443 - 116900089 MODEL JAAIVD010000023 pseudo 625964267 LOC116907104 olfactory receptor 150-like 8 82536254 82545746 + 22301074;30032202 116907104 MODEL JAAIVD010000027;XM_032910072 XP_032765963 protein-coding 625964271 LOC116883625 glyceraldehyde-3-phosphate dehydrogenase-like 14 29721341 29722236 - 116883625 MODEL JAAIVD010000009 pseudo 625964272 LOC116888509 protein SET-like X 107333072 107334343 - 116888509 MODEL JAAIVD010000014 pseudo 625964273 Podnl1 podocan like 1 FOUND IN extracellular matrix (ortholog) 17 16155396 16168314 - 22301074;30032202 116886626 MODEL JAAIVD010000011;XM_032888133 XP_032744024 podocan-like protein 1 protein-coding 625964286 Kiaa1755 KIAA1755 ortholog ASSOCIATED WITH prostate cancer (ortholog) 5 137539953 137573152 - 116900729 MODEL JAAIVD010000023;XM_032902436 XP_032758327 uncharacterized protein KIAA1755 homolog protein-coding 625964304 LOC116898477 CB1 cannabinoid receptor-interacting protein 1-like 4 113481299 113482637 + 30032202 116898477 MODEL JAAIVD010000003;XM_032899726 XP_032755617 protein-coding 625964309 LOC116887287 olfactory receptor 2A12-like 1 38329772 38330719 + 22301074 116887287 MODEL JAAIVD010000025;XM_032888870 XP_032744761 protein-coding 625964312 LOC116908223 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-like 8 76596566 76665077 + 116908223 MODEL JAAIVD010000027 pseudo 625964313 Wars2 tryptophanyl tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits tryptophan-tRNA ligase activity (ortholog); INVOLVED IN positive regulation of angiogenesis (ortholog); vasculogenesis (ortholog); PARTICIPATES IN tryptophan metabolic pathway; ASSOCIATED WITH genetic disease (ortholog); Mitochondrial Neurodevelopmental Disorder, with Abnormal Movements and Lactic Acidosis, with or without Seizures (ortholog); Parkinsonism-Dystonia, Childhood-Onset, 3 (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 7 86097859 86174328 - 22301074;30032202 116905149 MODEL JAAIVD010000026;XM_032907917;XM_032907918;XM_032907919;XM_032907920 XP_032763808;XP_032763809;XP_032763810;XP_032763811 tryptophan--tRNA ligase, mitochondrial protein-coding 625964329 Ndp norrin cystine knot growth factor NDP ENCODES a protein that exhibits cytokine activity (ortholog); frizzled binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN action potential (ortholog); angiogenesis (ortholog); blood vessel remodeling (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH exudative vitreoretinopathy (ortholog); Hereditary Eye Diseases (ortholog); macular retinal edema (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog) X 5226608 5251034 - 22301074;30032202 116889154 MODEL JAAIVD010000014;XM_032890320 XP_032746211 norrin protein-coding 625964336 Tmem147 transmembrane protein 147 ENCODES a protein that exhibits ribosome binding (ortholog); INVOLVED IN multi-pass transmembrane protein insertion into ER membrane (ortholog); protein localization to nuclear inner membrane (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); Neurodevelopmental Disorder with Facial Dysmorphism, Absent Language, and Pseudo-Pelger-Huet Anomaly (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); multi-pass translocon complex (ortholog); nuclear membrane (ortholog) 2 165286847 165288748 + 116892301 MODEL JAAIVD010000001;XM_032893919 XP_032749810 protein-coding 625964347 Rab5a RAB5A, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GDP-dissociation inhibitor binding (ortholog); INVOLVED IN amyloid-beta clearance by transcytosis (ortholog); canonical Wnt signaling pathway (ortholog); early endosome to late endosome transport (ortholog); PARTICIPATES IN autophagy pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH Myocardial Ischemia (ortholog); FOUND IN actin cytoskeleton (ortholog); axon (ortholog); axon terminus (ortholog) 4 90508209 90539230 + 22301074 116899225 MODEL JAAIVD010000003;XM_032900824;XM_032900825 XP_032756715;XP_032756716 ras-related protein Rab-5A protein-coding 625964359 Fras1 Fraser extracellular matrix complex subunit 1 INVOLVED IN embryonic limb morphogenesis (ortholog); metanephros morphogenesis (ortholog); morphogenesis of an epithelium (ortholog); ASSOCIATED WITH Axenfeld-Rieger syndrome (ortholog); CAKUT (ortholog); clubfoot (ortholog); FOUND IN basement membrane (ortholog) 11 7484806 7735111 - 22301074 116912660 MODEL JAAIVD010000006;XM_032916779 XP_032772670 extracellular matrix protein FRAS1 protein-coding 625964435 Sack1e scaffolding CK1 anchoring protein E ENCODES a protein that exhibits protein kinase binding (ortholog) 2 153791914 153799954 - 116892126 MODEL JAAIVD010000001;XM_032893613 XP_032749504 Fam83e family with sequence similarity 83 member E;protein FAM83E APPROVED protein-coding 625964444 LOC116910663 small nucleolar RNA R38 9 67397122 67397197 - 116910663 MODEL JAAIVD010000002;XR_004389195 snorna 625964447 LOC116912699 small nuclear ribonucleoprotein G-like 11 17802119 17802537 + 116912699 MODEL JAAIVD010000006 pseudo 625964448 LOC116906870 cytochrome P450 4F6-like 1 156972659 156989384 + 22301074 116906870 MODEL JAAIVD010000025;XM_032909781 XP_032765672 protein-coding 625964465 Zscan21 zinc finger and SCAN domain containing 21 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN male meiosis I (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleus (ortholog) 16 15494427 15508862 + 30032202 116885699 MODEL JAAIVD010000004;XM_032887006;XM_032887007 XP_032742897;XP_032742898 zinc finger and SCAN domain-containing protein 21 protein-coding 625964476 LOC116910295 60S ribosomal protein L24-like 9 46458004 46470819 - 116910295 MODEL JAAIVD010000002 pseudo 625964477 LOC116897501 small nucleolar RNA SNORA24 3 202466885 202467013 - 116897501 MODEL JAAIVD010000012;XR_004387522 snorna 625964480 Zer1 zyg-11 related cell cycle regulator INVOLVED IN positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); protein quality control for misfolded or incompletely synthesized proteins (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog) 22301074;30032202 116889755 MODEL JAAIVD010000081;XM_032890616 XP_032746507 protein zer-1 homolog protein-coding 625964481 LOC116889809 50S ribosomal protein L3-like 22301074;30032202 116889809 MODEL JAAIVD010000764;XM_032890656 XP_032746547 protein-coding 625964482 LOC116911714 translation initiation factor IF-2-like 10 62226200 62227068 - 116911714 MODEL JAAIVD010000005;XM_032915685 XP_032771576 protein-coding 625964487 LOC116884574 rho-related GTP-binding protein RhoG-like 15 47196519 47197153 - 116884574 MODEL JAAIVD010000010 pseudo 625964488 LOC116906314 U6 spliceosomal RNA 7 95729400 95729508 + 116906314 MODEL JAAIVD010000026;XR_004388602 snrna 625964491 Tnfaip8 TNF alpha induced protein 8 ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity involved in apoptotic process (ortholog); molecular sequestering activity (ortholog); small molecule binding (ortholog); INVOLVED IN defense response to Gram-positive bacterium (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); Neoplasm Metastasis (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog) 15 36553671 36667667 - 22301074;30032202 116884680 MODEL JAAIVD010000010;XM_032885856;XM_032885857;XM_032885858 XP_032741747;XP_032741748;XP_032741749 tumor necrosis factor alpha-induced protein 8 protein-coding 625964503 Fyco1 FYVE and coiled-coil domain autophagy adaptor 1 INVOLVED IN plus-end-directed vesicle transport along microtubule (ortholog); positive regulation of autophagosome maturation (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 18 (ortholog); Eye Abnormalities (ortholog); FOUND IN autophagosome (ortholog); late endosome (ortholog); lysosome (ortholog) 8 114892119 114959137 - 22301074;30032202 116908032 MODEL JAAIVD010000027;XM_032911300 XP_032767191 FYVE and coiled-coil domain-containing protein 1 protein-coding 625964525 Plch1 phospholipase C eta 1 ENCODES a protein that exhibits lysophospholipase C activity (ortholog); INVOLVED IN phosphatidylinositol-mediated signaling (ortholog); ASSOCIATED WITH Holoprosencephaly 14 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) 3 91342012 91537700 + 22301074;30032202 116896827 MODEL JAAIVD010000012;XM_032898305 XP_032754196 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 protein-coding 625964553 LOC116900020 odorant-binding protein 2a-like 5 11370979 11378549 - 30032202 116900020 MODEL JAAIVD010000023;XM_032901818 XP_032757709 protein-coding 625964561 Hoxd11 homeobox D11 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); branching involved in ureteric bud morphogenesis (ortholog); cartilage development involved in endochondral bone morphogenesis (ortholog); ASSOCIATED WITH autistic disorder (ortholog); bone development disease (ortholog); Breast Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog) 5 52023890 52025649 + 22301074;30032202 116900209 MODEL JAAIVD010000023;XM_032901964 XP_032757855 homeobox protein Hox-D11 protein-coding 625964565 C1qbp complement C1q binding protein ENCODES a protein that exhibits adrenergic receptor binding (ortholog); C5-methylcytidine-containing RNA reader activity (ortholog); complement component C1q complex binding (ortholog); INVOLVED IN cytosolic ribosome assembly (ortholog); mitochondrial RNA catabolic process (ortholog); negative regulation of defense response to virus (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); combined oxidative phosphorylation deficiency 33 (ortholog); genetic disease (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 50602333 50607079 - 22301074;30032202 116909122 MODEL JAAIVD010000002;XM_032912597 XP_032768488 complement component 1 Q subcomponent-binding protein, mitochondrial protein-coding 625964575 LOC116909549 CMRF35-like molecule 2 9 69043662 69051125 + 116909549 MODEL JAAIVD010000002 pseudo 625964576 Cap2 cyclase associated actin cytoskeleton regulatory protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN presynaptic actin cytoskeleton organization (ortholog); regulation of modification of postsynaptic actin cytoskeleton (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); Dilated Cardiomyopathy 2I (ortholog); hepatocellular carcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog); postsynaptic density (ortholog) 14 65479979 65626518 + 22301074;30032202 116883408 MODEL JAAIVD010000009;XM_032884533 XP_032740424 adenylyl cyclase-associated protein 2 protein-coding 625964593 Ngfr nerve growth factor receptor ENCODES a protein that exhibits amyloid-beta binding (ortholog); calmodulin binding (ortholog); coreceptor activity (ortholog); INVOLVED IN axon guidance (ortholog); cellular response to amyloid-beta (ortholog); cellular response to oxidative stress (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); Alcohol-Related Disorders (ortholog); Alzheimer's disease (ortholog); FOUND IN cell surface (ortholog); cell-cell junction (ortholog); clathrin-coated endocytic vesicle (ortholog) 9 58799000 58816269 + 30032202 116910147 MODEL JAAIVD010000002;XM_032913996 XP_032769887 tumor necrosis factor receptor superfamily member 16 protein-coding 625964603 LOC116893418 vomeronasal type-1 receptor 4-like 2 174623801 174635554 - 116893418 MODEL JAAIVD010000001 pseudo 625964604 LOC116897640 U2 spliceosomal RNA 3 131275663 131275852 + 116897640 MODEL JAAIVD010000012;XR_004387619 snrna 625964607 Slc6a15 solute carrier family 6 member 15 ENCODES a protein that exhibits branched-chain amino acid:sodium symporter activity (ortholog); neutral L-amino acid:sodium symporter activity (ortholog); proline:sodium symporter activity (ortholog); INVOLVED IN L-leucine transport (ortholog); neutral amino acid transport (ortholog); proline transport (ortholog); FOUND IN membrane (ortholog) 1 181768286 181820919 + 22301074;30032202 116908629 MODEL JAAIVD010000025;XM_032911883 XP_032767774 sodium-dependent neutral amino acid transporter B(0)AT2 protein-coding 625964623 LOC116909386 60S ribosomal protein L21-like 9 51528610 51529004 + 116909386 MODEL JAAIVD010000002 pseudo 625964624 Ubxn7 UBX domain protein 7 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); ubiquitin binding (ortholog); ubiquitin protein ligase binding (ortholog); FOUND IN nucleoplasm (ortholog); VCP-NPL4-UFD1 AAA ATPase complex (ortholog) 4 17141769 17202489 + 30032202 116898772 MODEL JAAIVD010000003;XM_032900108 XP_032755999 UBX domain-containing protein 7 protein-coding 625964639 LOC116912751 uncharacterized LOC116912751 11 64761276 64764775 + 116912751 MODEL JAAIVD010000006;XR_004389477 ncrna 625964644 LOC116889892 non-histone chromosomal protein HMG-17-like 1 244505567 244512241 + 116889892 MODEL JAAIVD010000025 pseudo 625964645 Itgb8 integrin subunit beta 8 ENCODES a protein that exhibits coreceptor activity (ortholog); extracellular matrix protein binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN cartilage development (ortholog); cell-matrix adhesion (ortholog); ganglioside metabolic process (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); endometriosis (ortholog); Familial Prostate Cancer (ortholog); FOUND IN cell surface (ortholog); integrin alphav-beta8 complex (ortholog) 7 116906842 116986340 + 30032202 116905392 MODEL JAAIVD010000026;XM_032908342 XP_032764233 integrin beta-8 protein-coding 625964663 LOC116900551 olfactory receptor 4K3-like 5 89846296 89847237 - 22301074 116900551 MODEL JAAIVD010000023;XM_032902277 XP_032758168 protein-coding 625964667 LOC116906793 glutathione S-transferase alpha-2-like 8 72512249 72524429 - 22301074;30032202 116906793 MODEL JAAIVD010000027;XM_032909659 XP_032765550 protein-coding 625964678 LOC116890634 U2 spliceosomal RNA 1 42475152 42475323 - 116890634 MODEL JAAIVD010000025 pseudo 625964679 Synpo synaptopodin ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN positive regulation of actin filament bundle assembly (ortholog); postsynaptic modulation of chemical synaptic transmission (ortholog); regulation of long-term neuronal synaptic plasticity (ortholog); ASSOCIATED WITH chronic kidney disease (ortholog); focal segmental glomerulosclerosis 8 (ortholog); glomerulosclerosis (ortholog); FOUND IN actin cytoskeleton (ortholog); cell periphery (ortholog); cytosol (ortholog) 15 71315914 71350161 + 30032202 116884445 MODEL JAAIVD010000010;XM_032885540 XP_032741431 protein-coding 625964686 LOC116885274 serine/threonine-protein kinase Chk2-like 16 43112051 43131891 - 116885274 MODEL JAAIVD010000004 pseudo 625964687 Trnah-gug transfer RNA histidin (anticodon GUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 5 100483335 100483406 - 116902674 MODEL JAAIVD010000023 trna 625964688 Rnf144b ring finger protein 144B ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Endometrial Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) 14 66188620 66242157 + 22301074;30032202 116883431 MODEL JAAIVD010000009;XM_032884567;XM_032884569 XP_032740458;XP_032740460 E3 ubiquitin-protein ligase RNF144B protein-coding 625964704 Rasa2 RAS p21 protein activator 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); melanoma (ortholog); Noonan syndrome (ortholog) 8 87987393 88087481 - 22301074;7935405 116907053 MODEL D30734;JAAIVD010000027;XM_032910008 BAA06398;XP_032765899 Ras GTPase-activating protein;ras GTPase-activating protein 2 protein-coding 625964732 LOC116900201 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1-like 5 51324728 51324987 - 116900201 MODEL JAAIVD010000023 pseudo 625964733 LOC116905555 mitochondrial RNA pseudouridine synthase Rpusd4-like 7 24157844 24161839 - 116905555 MODEL JAAIVD010000026 pseudo 625964734 Ugt1a1 UDP glucuronosyltransferase family 1 member A1 ENCODES a protein that exhibits enzyme binding (ortholog); enzyme inhibitor activity (ortholog); glucuronosyltransferase activity (ortholog); INVOLVED IN acute-phase response (ortholog); animal organ regeneration (ortholog); bilirubin conjugation (ortholog); PARTICIPATES IN axitinib pharmacokinetics pathway; codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); autism spectrum disorder (ortholog); FOUND IN cytochrome complex (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum chaperone complex (ortholog) 4 160244579 160251687 + 22301074 116899622 MODEL JAAIVD010000003;XM_032901584 XP_032757475 UDP-glucuronosyltransferase 1-1 protein-coding 625964743 LOC116900365 olfactory receptor 5I1 5 69387875 69388819 + 22301074;30032202 116900365 MODEL JAAIVD010000023;XM_032902114 XP_032758005 protein-coding 625964746 LOC116885855 translationally-controlled tumor protein-like 16 3672713 3673427 - 116885855 MODEL JAAIVD010000004 pseudo 625964747 Tas2r4 taste 2 receptor member 4 ENCODES a protein that exhibits bitter taste receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog) 6 99315238 99316296 - 22301074;30032202 116902885 MODEL JAAIVD010000024;XM_032905217 XP_032761108 taste receptor type 2 member 4 protein-coding 625964751 LOC116902798 peptidyl-prolyl cis-trans isomerase D-like 6 83174388 83175903 + 116902798 MODEL JAAIVD010000024 pseudo 625964752 Tpm2 tropomyosin 2 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); identical protein binding (ortholog); INVOLVED IN regulation of ATP-dependent activity (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); congenital myopathy 4A (ortholog); COVID-19 (ortholog); FOUND IN actin cytoskeleton (ortholog) 1 2972768 2982089 + 30032202 116891031 MODEL JAAIVD010000025;XM_032891716;XM_032891723;XM_032891731;XM_032891739 XP_032747607;XP_032747614;XP_032747622;XP_032747630 tropomyosin beta chain protein-coding 625964775 Lrrc75b leucine rich repeat containing 75B 18 11883728 11890361 + 116887246 MODEL JAAIVD010000013;XM_032888813 XP_032744704 leucine-rich repeat-containing protein 75B protein-coding 625964783 Trnak-cuu transfer RNA lysine (anticodon CUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 12 5347286 5347358 - 116914205 MODEL JAAIVD010000007 trna 625964784 Mlh3 mutL homolog 3 ENCODES a protein that exhibits centromeric DNA binding (ortholog); chromatin binding (ortholog); INVOLVED IN DNA damage response (ortholog); female meiosis I (ortholog); intracellular protein localization (ortholog); PARTICIPATES IN mismatch repair pathway; ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); breast carcinoma (ortholog); FOUND IN chiasma (ortholog); condensed chromosome (ortholog); condensed nuclear chromosome (ortholog) 7 99343594 99378474 - 22301074;30032202 116905291 MODEL JAAIVD010000026;XM_032908153;XM_032908154;XM_032908155;XM_032908156 XP_032764044;XP_032764045;XP_032764046;XP_032764047 DNA mismatch repair protein Mlh3 protein-coding 625964808 Eya3 EYA transcriptional coactivator and phosphatase 3 ENCODES a protein that exhibits chromatin binding (ortholog); histone H2AXY142 phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN double-strand break repair (ortholog); positive regulation of DNA repair (ortholog); protein dephosphorylation (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) 1 25514954 25581855 - 22301074;30032202 116895422 MODEL JAAIVD010000025;XM_032896704;XM_032896711 XP_032752595;XP_032752602 eyes absent homolog 3 protein-coding 625964832 Rap2b RAP2B, member of RAS oncogene family ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN establishment of endothelial intestinal barrier (ortholog); negative regulation of cell migration (ortholog); platelet activation (ortholog); FOUND IN bicellular tight junction (ortholog); cell-cell contact zone (ortholog); cytosol (ortholog) 3 93731426 93732860 - 22301074;30032202 116896832 MODEL JAAIVD010000012;XM_032898314 XP_032754205 ras-related protein Rap-2b protein-coding 625964837 LOC116913750 40S ribosomal protein S17-like 12 58838256 58838698 - 22301074;30032202 116913750 MODEL JAAIVD010000007;XM_032918057 XP_032773948 protein-coding 625964841 LOC116911150 serpin B8 10 86099103 86124658 - 30032202 116911150 MODEL JAAIVD010000005;XM_032915005 XP_032770896 protein-coding 625964852 Tgfbr3l transforming growth factor beta receptor 3 like 16 2381764 2384462 + 116885217 MODEL JAAIVD010000004;XM_032886452;XM_032886453 XP_032742343;XP_032742344 transforming growth factor-beta receptor type 3-like protein protein-coding 625964865 LOC116896114 small proline-rich protein 2I-like 3 760906 761151 - 22301074 116896114 MODEL JAAIVD010000012;XM_032897078 XP_032752969 protein-coding 625964868 Fam204a family with sequence similarity 204 member A 2 55921435 55950606 + 116891309 MODEL JAAIVD010000001;XM_032892222 XP_032748113 protein FAM204A protein-coding 625964880 LOC116887114 keratin-associated protein 12-1-like 18 1053523 1053825 + 22301074 116887114 MODEL JAAIVD010000013;XM_032888657 XP_032744548 protein-coding 625964883 Hoxd10 homeobox D10 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN adult locomotory behavior (ortholog); anterior/posterior pattern specification (ortholog); embryonic limb morphogenesis (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); congenital vertical talus (ortholog); Disease Progression (ortholog) 5 52033404 52036612 + 22301074;30032202 116900210 MODEL JAAIVD010000023;XM_032901965 XP_032757856 homeobox protein Hox-D10 protein-coding 625964889 Prdx3 peroxiredoxin 3 ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity involved in apoptotic process (ortholog); identical protein binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); cellular response to reactive oxygen species (ortholog); hydrogen peroxide catabolic process (ortholog); ASSOCIATED WITH autosomal recessive cerebellar ataxia (ortholog); autosomal recessive spinocerebellar ataxia 32 (ortholog); CORNEAL DYSTROPHY, PUNCTIFORM AND POLYCHROMATIC PRE-DESCEMET (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); early endosome (ortholog) 2 55279010 55291758 + 30032202 116891303 MODEL JAAIVD010000001;XM_032892212 XP_032748103 thioredoxin-dependent peroxide reductase, mitochondrial protein-coding 625964900 LOC116895216 alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 3 8772645 8810171 + 30032202 116895216 MODEL JAAIVD010000012;XM_032896547 XP_032752438 protein-coding 625964907 Fbxo30 F-box protein 30 INVOLVED IN chromatin organization (ortholog); chromosome condensation (ortholog); chromosome segregation (ortholog) 2 225930719 225941720 - 22301074;30032202 116893020 MODEL JAAIVD010000001;XM_032894980 XP_032750871 F-box only protein 30 protein-coding 625964913 Arhgap39 Rho GTPase activating protein 39 INVOLVED IN postsynapse organization (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog) 1 249051618 249203177 - 22301074;30032202 116913411 MODEL JAAIVD010000025;XM_032917598;XM_032917606 XP_032773489;XP_032773497 rho GTPase-activating protein 39 protein-coding 625964930 LOC116896948 uncharacterized LOC116896948 1 34484098 34491484 + 116896948 MODEL JAAIVD010000025;XR_004387383 ncrna 625964935 LOC116883898 uncharacterized LOC116883898 14 42559520 42568180 + 22301074;30032202 116883898 MODEL JAAIVD010000009;XM_032885166 XP_032741057 uncharacterized protein LOC116883898 protein-coding 625964943 LOC116904514 60S ribosomal protein L15-like 6 6776856 6777524 - 116904514 MODEL JAAIVD010000024;XR_004388340 pseudo 625964946 LOC116903872 ATP synthase subunit delta, mitochondrial-like 6 92945206 92945706 - 22301074;30032202 116903872 MODEL JAAIVD010000024;XM_032906625 XP_032762516 protein-coding 625964949 Mroh1 maestro heat like repeat family member 1 ENCODES a protein that exhibits membrane destabilizing activity (ortholog); INVOLVED IN lysosome fission (ortholog); FOUND IN lysosomal membrane (ortholog) 1 248726833 248785271 + 22301074;30032202 116913201 MODEL JAAIVD010000025;XM_032917388;XM_032917391 XP_032773279;XP_032773282 maestro heat-like repeat-containing protein family member 1 protein-coding 625964995 LOC116884892 60S ribosomal protein L21-like 15 72827804 72828982 - 116884892 MODEL JAAIVD010000010 pseudo 625964996 LOC116896017 ferritin light chain 1-like 3 177484160 177484802 + 116896017 MODEL JAAIVD010000012 pseudo 625964997 LOC116903467 uncharacterized LOC116903467 6 47380825 47404210 + 116903467 MODEL JAAIVD010000024;XR_004388278 ncrna 625965002 Bdkrb1 bradykinin receptor B1 ENCODES a protein that exhibits bradykinin receptor activity (ortholog); peptide binding (ortholog); INVOLVED IN cell migration (ortholog); cyclooxygenase pathway (ortholog); negative regulation of blood pressure (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphai family; G protein mediated signaling pathway via Galphaq family; kallikrein-kinin cascade pathway; ASSOCIATED WITH Diabetes Complications (ortholog); diabetic angiopathy (ortholog); diabetic neuropathy (ortholog) 7 123263513 123265973 + 22301074;30032202 116904868 MODEL JAAIVD010000026;XM_032907460 XP_032763351 B1 bradykinin receptor protein-coding 625965008 Rbm15b RNA binding motif protein 15B ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN dosage compensation by inactivation of X chromosome (ortholog); mRNA export from nucleus (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN nuclear envelope (ortholog); nuclear speck (ortholog); nucleolus (ortholog) 8 98197149 98204217 - 30032202 116907504 MODEL JAAIVD010000027;XM_032910504 XP_032766395 putative RNA-binding protein 15B protein-coding 625965013 Chac1 ChaC glutathione specific gamma-glutamylcyclotransferase 1 ENCODES a protein that exhibits glutathione specific gamma-glutamylcyclotransferase activity (ortholog); Notch binding (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (ortholog); negative regulation of Notch signaling pathway (ortholog); negative regulation of protein processing (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytosol (ortholog); trans-Golgi network (ortholog) 5 97530042 97533282 + 22301074;30032202 116901809 MODEL JAAIVD010000023;XM_032903969 XP_032759860 glutathione-specific gamma-glutamylcyclotransferase 1 protein-coding 625965020 LOC116907272 poly(rC)-binding protein 2-like 8 15655918 15662183 - 116907272 MODEL JAAIVD010000027 pseudo 625965021 Znf740 zinc finger protein 740 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog) 1 260858198 260868926 - 30032202 116883549 MODEL JAAIVD010000025;XM_032884724;XM_032884733;XM_032884740;XM_032884748;XM_032884755;XM_032884759;XM_032884767 XP_032740615;XP_032740624;XP_032740631;XP_032740639;XP_032740646;XP_032740650;XP_032740658 protein-coding 625965044 Aamdc adipogenesis associated Mth938 domain containing INVOLVED IN negative regulation of apoptotic process (ortholog); positive regulation of fat cell differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasm (ortholog) 2 95872567 95902019 - 30032202 116891703 MODEL JAAIVD010000001;XM_032892967 XP_032748858 mth938 domain-containing protein protein-coding 625965052 Sla Src like adaptor PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); vitiligo (ortholog) 1 240894223 240944866 - 22301074 116912283 MODEL JAAIVD010000025;XM_032916282;XM_032916290;XM_032916297 XP_032772173;XP_032772181;XP_032772188 src-like-adapter protein-coding 625965070 Gsc goosecoid homeobox ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN anatomical structure morphogenesis (ortholog); dorsal/ventral neural tube patterning (ortholog); ear development (ortholog); ASSOCIATED WITH Craniofacial Abnormalities (ortholog); Short Stature, Auditory Canal Atresia, Mandibular Hypoplasia, Skeletal Abnormalities (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); transcription regulator complex (ortholog) 7 115540926 115542971 - 22301074;30032202 116905880 MODEL JAAIVD010000026;XM_032908869 XP_032764760 homeobox protein goosecoid protein-coding 625965077 LOC116911806 small nucleolar RNA SNORD47 10 40327447 40327524 + 116911806 MODEL JAAIVD010000005;XR_004389346 snorna 625965080 LOC116910541 pre-mRNA-splicing factor SPF27-like 1 209023376 209026285 + 116910541 MODEL JAAIVD010000025 pseudo 625965081 LOC116894976 small nucleolar RNA SNORA20 2 53393703 53393830 + 116894976 MODEL JAAIVD010000001;XR_004387167 snorna 625965084 LOC116893295 60S acidic ribosomal protein P0-like 2 149268060 149268420 - 30032202 116893295 MODEL JAAIVD010000001;XM_032895125 XP_032751016 protein-coding 625965088 LOC116902687 DNA methyltransferase 1-associated protein 1-like 6 39792931 39794372 - 116902687 MODEL JAAIVD010000024 pseudo 625965089 LOC116909166 olfactory receptor 15 ENCODES a protein that exhibits odorant binding (ortholog); olfactory receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception (ortholog); detection of chemical stimulus involved in sensory perception of smell (ortholog); FOUND IN cell cortex (ortholog); membrane (ortholog) 9 17999362 18000300 - 22301074 116909166 MODEL JAAIVD010000002;XM_032912656 XP_032768547 protein-coding 625965092 LOC116884778 non-histone chromosomal protein HMG-17-like 15 30810905 30811229 + 116884778 MODEL JAAIVD010000010 pseudo 625965093 LOC116915157 U4 spliceosomal RNA 13 32202474 32202584 - 116915157 MODEL JAAIVD010000008 pseudo 625965094 LOC116906441 uncharacterized LOC116906441 1 156217457 156219853 + 116906441 MODEL JAAIVD010000025;XR_004388705 ncrna 625965099 LOC116906371 small nucleolar RNA SNORD113/SNORD114 family 7 127266508 127266582 + 116906371 MODEL JAAIVD010000026;XR_004388640 snorna 625965102 LOC116903191 uncharacterized LOC116903191 6 18066022 18066660 + 116903191 MODEL JAAIVD010000024;XR_004388258 ncrna 625965106 Nrcam neuronal cell adhesion molecule ENCODES a protein that exhibits ankyrin binding (ortholog); protein binding involved in heterotypic cell-cell adhesion (ortholog); INVOLVED IN angiogenesis (ortholog); axon guidance (ortholog); cell-cell adhesion (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Breast Neoplasms (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); cilium (ortholog) 7 58188046 58268286 + 30032202 116905009 MODEL JAAIVD010000026;XM_032907694;XM_032907695 XP_032763585;XP_032763586 protein-coding 625965147 Mylk4 myosin light chain kinase family member 4 ASSOCIATED WITH long QT syndrome (ortholog) 14 51734783 51809238 - 22301074;30032202 116883729 MODEL JAAIVD010000009;XM_032884962;XM_032884963 XP_032740853;XP_032740854 protein-coding 625965167 Galnt6 polypeptide N-acetylgalactosaminyltransferase 6 ENCODES a protein that exhibits polypeptide N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation via N-acetyl-galactosamine (ortholog); FOUND IN Golgi apparatus (ortholog); perinuclear region of cytoplasm (ortholog) 1 262380973 262419408 + 30032202 116883903 MODEL JAAIVD010000025;XM_032885169;XM_032885171;XM_032885177 XP_032741060;XP_032741062;XP_032741068 protein-coding 625965189 LOC116914695 uncharacterized LOC116914695 13 1576209 1578375 + 116914695 MODEL JAAIVD010000008;XR_004389762 ncrna 625965193 LOC116891762 T-cell ecto-ADP-ribosyltransferase 2 2 99889103 99896866 - 22301074;30032202 116891762 MODEL JAAIVD010000001;XM_032893087 XP_032748978 protein-coding 625965201 Ap1b1 adaptor related protein complex 1 subunit beta 1 ENCODES a protein that exhibits protein kinase binding (ortholog); protein serine/threonine kinase binding (ortholog); INVOLVED IN clathrin coat assembly (ortholog); determination of left/right symmetry (ortholog); heart development (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH genetic disease (ortholog); Ichthyosiform Erythroderma, Corneal Involvement, Deafness (ortholog); Kartagener syndrome (ortholog); FOUND IN Golgi apparatus (ortholog); synaptic vesicle (ortholog) 11 73962157 74014149 + 22301074;30032202 116912150 MODEL JAAIVD010000006;XM_032916063 XP_032771954 AP-1 complex subunit beta-1 protein-coding 625965229 Rspo2 R-spondin 2 ENCODES a protein that exhibits heparin binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN bone mineralization (ortholog); dopaminergic neuron differentiation (ortholog); embryonic forelimb morphogenesis (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Humerofemoral Hypoplasia with Radiotibial Ray Deficiency (ortholog); tetraamelia syndrome (ortholog); tetraamelia syndrome 2 (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog) 1 217619226 217755111 - 116911091 MODEL JAAIVD010000025;XM_032914924;XM_032914931;XM_032914940 XP_032770815;XP_032770822;XP_032770831 R-spondin-2 protein-coding 625965246 Elapor1 endosome-lysosome associated apoptosis and autophagy regulator 1 INVOLVED IN autophagosome assembly (ortholog); cellular response to starvation (ortholog); positive regulation of autophagosome assembly (ortholog); FOUND IN late endosome (ortholog); lysosome (ortholog); plasma membrane (ortholog) 3 49725679 49800598 + 30032202 116896358 MODEL JAAIVD010000012;XM_032897465;XM_032897466 XP_032753356;XP_032753357 UPF0577 protein KIAA1324 homolog protein-coding 625965275 Astn2 astrotactin 2 ENCODES a protein that exhibits calcium ion binding (ortholog); inositol 1,3,4,5 tetrakisphosphate binding (ortholog); INVOLVED IN establishment of body hair planar orientation (ortholog); negative regulation of protein localization to cell surface (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); autistic disorder (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2H (ortholog); FOUND IN cell pole (ortholog); endosome (ortholog); membrane (ortholog) 1 87513759 88317135 + 22301074;30032202 116901198 MODEL JAAIVD010000025;XM_032902906 XP_032758797 astrotactin-2 protein-coding 625965300 LOC116910359 olfactory receptor 6C1-like 1 161649146 161650070 - 116910359 MODEL JAAIVD010000025 pseudo 625965301 Ccz1 CCZ1 vacuolar protein trafficking and biogenesis associated ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); FOUND IN late endosome (ortholog); Mon1-Ccz1 complex (ortholog) 16 9167281 9191610 + 22301074;30032202 116885391 MODEL JAAIVD010000004;XM_032886670;XM_032886671 XP_032742561;XP_032742562 CCZ1 homolog, vacuolar protein trafficking and biogenesis associated;vacuolar fusion protein CCZ1 homolog protein-coding 625965323 LOC116888441 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4-like X 110034197 110034778 - 116888441 MODEL JAAIVD010000014 pseudo 625965324 LOC116887557 H-2 class I histocompatibility antigen, alpha chain-like 18 8456909 8459143 - 30032202 116887557 MODEL JAAIVD010000013;XM_032889186 XP_032745077 protein-coding 625965330 Maob monoamine oxidase B ENCODES a protein that exhibits flavin adenine dinucleotide binding (ortholog); identical protein binding (ortholog); monoamine oxidase activity (ortholog); INVOLVED IN negative regulation of serotonin secretion (ortholog); phenylethylamine catabolic process (ortholog); positive regulation of dopamine metabolic process (ortholog); PARTICIPATES IN citalopram pharmacodynamics pathway; citalopram pharmacokinetics pathway; Parkinson's disease pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Amyloid Plaques (ortholog); autistic disorder (ortholog); FOUND IN dendrite (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) X 5063120 5167820 - 22301074 116889054 MODEL JAAIVD010000014;XM_032890243 XP_032746134 amine oxidase [flavin-containing] B protein-coding 625965350 Pde5a phosphodiesterase 5A ENCODES a protein that exhibits 3',5'-cyclic-GMP phosphodiesterase activity (ortholog); 3',5'-cyclic-nucleotide phosphodiesterase activity (ortholog); cGMP binding (ortholog); INVOLVED IN cGMP catabolic process (ortholog); cGMP metabolic process (ortholog); negative regulation of cardiac muscle contraction (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); Experimental Diabetes Mellitus (ortholog); Hearing Loss (ortholog) 3 36956410 37094029 - 22301074;30032202 116896296 MODEL JAAIVD010000012;XM_032897379 XP_032753270 cGMP-specific 3',5'-cyclic phosphodiesterase protein-coding 625965375 Adnp2 ADNP homeobox 2 INVOLVED IN nervous system development (ortholog) 15 52081481 52108769 + 22301074;30032202 116884256 MODEL JAAIVD010000010;XM_032885339;XM_032885340 XP_032741230;XP_032741231 activity-dependent neuroprotector homeobox protein 2 protein-coding 625965386 LOC116887157 guanine nucleotide-binding protein-like 3 18 42458344 42460353 - 116887157 MODEL JAAIVD010000013 pseudo 625965387 LOC116899788 U6 spliceosomal RNA 4 159247222 159247320 - 116899788 MODEL JAAIVD010000003 pseudo 625965388 LOC116910899 dimethylaniline monooxygenase [N-oxide-forming] 5-like 10 45557883 45569275 - 22301074;30032202 116910899 MODEL JAAIVD010000005;XM_032914665 XP_032770556 protein-coding 625965398 Zfand2a zinc finger AN1-type containing 2A INVOLVED IN cellular response to arsenic-containing substance (ortholog); positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); FOUND IN proteasome complex (ortholog) 16 13716365 13725198 + 22301074;30032202 116885454 MODEL JAAIVD010000004;XM_032886738 XP_032742629 AN1-type zinc finger protein 2A protein-coding 625965408 LOC116894028 olfactory receptor 51V1-like 2 102041981 102042922 + 22301074 116894028 MODEL JAAIVD010000001;XM_032895745 XP_032751636 protein-coding 625965411 LOC116904370 elongation factor 1-beta-like 6 86744788 86745451 - 116904370 MODEL JAAIVD010000024 pseudo 625965412 Lgsn lengsin, lens protein with glutamine synthetase domain FOUND IN plasma membrane (ortholog) 4 107902350 107916554 + 22301074;30032202 116898468 MODEL JAAIVD010000003;XM_032899721 XP_032755612 lengsin protein-coding 625965420 Atraid all-trans retinoic acid induced differentiation factor ENCODES a protein that exhibits xenobiotic transmembrane transporter activity (ortholog); INVOLVED IN cell differentiation (ortholog); negative regulation of osteoblast proliferation (ortholog); negative regulation of protein catabolic process (ortholog); FOUND IN lysosomal membrane (ortholog); nuclear envelope (ortholog); perinuclear region of cytoplasm (ortholog) 7 23023777 23028578 - 30032202 116905987 MODEL JAAIVD010000026;XM_032909017 XP_032764908 all-trans retinoic acid-induced differentiation factor protein-coding 625965431 LOC116899381 nucleophosmin-like 4 124366203 124367153 + 30032202 116899381 MODEL JAAIVD010000003;XM_032901098 XP_032756989 protein-coding 625965435 LOC116885174 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1-like 16 33186165 33186376 - 116885174 MODEL JAAIVD010000004 pseudo 625965436 LOC116886761 5S ribosomal RNA 17 43165805 43165924 - 116886761 MODEL JAAIVD010000011;XR_004386162 rrna 625965439 LOC116910352 CMRF35-like molecule 3 9 69197939 69204215 + 116910352 MODEL JAAIVD010000002 pseudo 625965440 LOC116908457 U6 spliceosomal RNA 8 57423098 57423204 + 116908457 MODEL JAAIVD010000027;XR_004388975 snrna 625965443 Zcchc10 zinc finger CCHC-type containing 10 9 35806770 35816977 + 22301074 116910080 MODEL JAAIVD010000002;XM_032913896 XP_032769787 zinc finger CCHC domain-containing protein 10 protein-coding 625965451 LOC116887881 actin, muscle-like X 49152108 49152742 - 116887881 MODEL JAAIVD010000014 pseudo 625965452 LOC116913953 protein CEBPZOS-like 12 70169611 70169848 + 116913953 MODEL JAAIVD010000007 pseudo 625965453 LOC116886164 40S ribosomal protein S18-like 17 29899063 29899528 + 116886164 MODEL JAAIVD010000011 pseudo 625965454 Slc17a8 solute carrier family 17 member 8 ENCODES a protein that exhibits chloride channel activity (ortholog); L-glutamate uniporter activity (ortholog); sodium:phosphate symporter activity (ortholog); INVOLVED IN cochlea development (ortholog); L-glutamate import (ortholog); L-glutamate transmembrane transport (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH autosomal dominant nonsyndromic deafness 25 (ortholog); autosomal recessive nonsyndromic deafness 9 (ortholog); cochlear disease (ortholog); FOUND IN apical dendrite (ortholog); axon terminus (ortholog); basal dendrite (ortholog) 1 168635473 168684898 - 22301074;30032202 116907882 MODEL JAAIVD010000025;XM_032911074;XM_032911083 XP_032766965;XP_032766974 vesicular glutamate transporter 3 protein-coding 625965475 Mitf melanocyte inducing transcription factor ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN bone remodeling (ortholog); camera-type eye development (ortholog); cell differentiation (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; ASSOCIATED WITH autosomal dominant nonsyndromic deafness (ortholog); Camurati-Engelmann disease (ortholog); COLOBOMA, OSTEOPETROSIS, MICROPHTHALMIA, MACROCEPHALY, ALBINISM, AND DEAFNESS (ortholog); FOUND IN cytoplasm (ortholog); lysosomal membrane (ortholog); nucleus (ortholog) 6 49041975 49244249 - 22301074;30032202 116903470 MODEL JAAIVD010000024;XM_032906032;XM_032906033;XM_032906034;XM_032906035 XP_032761923;XP_032761924;XP_032761925;XP_032761926 microphthalmia-associated transcription factor protein-coding 625965494 LOC116884575 polyglutamine-binding protein 1-like 15 47397125 47397941 + 116884575 MODEL JAAIVD010000010 pseudo 625965495 LOC116908778 group 10 secretory phospholipase A2 9 8783779 8795177 - 22301074;30032202 116908778 MODEL JAAIVD010000002;XM_032912150 XP_032768041 protein-coding 625965503 Spata17 spermatogenesis associated 17 10 65165487 65338714 - 22301074;30032202 116911709 MODEL JAAIVD010000005;XM_032915678 XP_032771569 spermatogenesis-associated protein 17 protein-coding 625965517 LOC116913476 granzyme-like protein 1 12 68685661 68688645 + 22301074;30032202 116913476 MODEL JAAIVD010000007;XM_032917679 XP_032773570 protein-coding 625965526 LOC116897367 centromere protein R-like 3 222201720 222204329 + 116897367 MODEL JAAIVD010000012;XR_004387425 pseudo 625965529 LOC116910952 BEN domain-containing protein 3-like 10 80757112 80761114 - 116910952 MODEL JAAIVD010000005 pseudo 625965530 Selenop selenoprotein P ENCODES a protein that exhibits selenium binding (ortholog); INVOLVED IN brain development (ortholog); locomotory behavior (ortholog); post-embryonic development (ortholog); ASSOCIATED WITH adenoma (ortholog); Animal Mammary Neoplasms (ortholog); Cadmium Poisoning (ortholog); FOUND IN extracellular region (ortholog) 3 176747324 176757328 - 30032202 116897161 MODEL JAAIVD010000012;XM_032898831;XM_032898832 XP_032754722;XP_032754723 protein-coding 625965541 Uevld UEV and lactate/malate dehyrogenase domains 2 152422729 152451935 + 22301074;30032202 116892092 MODEL JAAIVD010000001;XM_032893567 XP_032749458 ubiquitin-conjugating enzyme E2 variant 3 protein-coding 625965557 Mast3 microtubule associated serine/threonine kinase 3 ENCODES a protein that exhibits protein serine kinase activity (ortholog); INVOLVED IN negative regulation of phosphatase activity (ortholog); protein phosphorylation (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy (ortholog); developmental and epileptic encephalopathy 108 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog) 13 13020149 13047313 - 22301074;30032202 116914395 MODEL JAAIVD010000008;XM_032918612;XM_032918613;XM_032918614;XM_032918615;XM_032918616;XM_032918618;XM_032918619;XM_032918620;XM_032918621;XM_032918622 XP_032774503;XP_032774504;XP_032774505;XP_032774506;XP_032774507;XP_032774509;XP_032774510;XP_032774511;XP_032774512;XP_032774513 microtubule-associated serine/threonine-protein kinase 3 protein-coding 625965608 Armcx4 armadillo repeat containing X-linked 4 X 86981930 86992333 + 22301074 116888049 MODEL JAAIVD010000014;XM_032889443 XP_032745334 armadillo repeat-containing X-linked protein 4 protein-coding 625965615 LOC116907357 uncharacterized LOC116907357 8 53174250 53176395 + 116907357 MODEL JAAIVD010000027;XR_004388818 ncrna 625965621 LOC116897979 histone H2A.V-like 4 52668394 52668863 + 22301074;30032202 116897979 MODEL JAAIVD010000003;XM_032899382;XM_032899383;XM_032899384 XP_032755273;XP_032755274;XP_032755275 protein-coding 625965633 LOC116896248 UPF0183 protein C16orf70 homolog 3 28267028 28268345 + 116896248 MODEL JAAIVD010000012 pseudo 625965634 LOC116912914 THO complex subunit 2-like 11 14575506 14596382 + 30032202 116912914 MODEL JAAIVD010000006;XM_032917170;XM_032917171;XM_032917172;XM_032917173;XM_032917175 XP_032773061;XP_032773062;XP_032773063;XP_032773064;XP_032773066 protein-coding 625965654 Adgrf2 adhesion G protein-coupled receptor F2 INVOLVED IN amelogenesis (ortholog); enamel mineralization (ortholog); gene expression (ortholog); ASSOCIATED WITH autistic disorder (ortholog) 4 93359437 93369584 + 22301074 116898438 MODEL JAAIVD010000003;XM_032899709 XP_032755600 adhesion G-protein coupled receptor F2 protein-coding 625965661 LOC116903030 transmembrane emp24 domain-containing protein 10-like 6 158487263 158487905 - 116903030 MODEL JAAIVD010000024 pseudo 625965662 Tbc1d17 TBC1 domain family member 17 INVOLVED IN regulation of cilium assembly (ortholog); retrograde transport, endosome to Golgi (ortholog); FOUND IN cytosol (ortholog) 2 154693416 154702075 + 30032202 116892190 MODEL JAAIVD010000001;XM_032893716 XP_032749607 protein-coding 625965683 Pank1 pantothenate kinase 1 ENCODES a protein that exhibits acetyl-CoA binding (ortholog); pantothenate kinase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN coenzyme A biosynthetic process (ortholog); PARTICIPATES IN Fanconi syndrome pathway; fructose-1,6-bisphosphatase deficiency pathway; gluconeogenesis pathway; ASSOCIATED WITH Nerve Degeneration (ortholog); FOUND IN cell periphery (ortholog); clathrin coat (ortholog); cytoplasm (ortholog) 2 34422365 34491054 - 22301074;30032202 116891112 MODEL JAAIVD010000001;XM_032891825;XM_032891826;XM_032891827 XP_032747716;XP_032747717;XP_032747718 protein-coding 625965700 Scaf1 SR-related CTD associated factor 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); RNA polymerase II C-terminal domain binding (ortholog); INVOLVED IN mRNA processing (ortholog); transcription by RNA polymerase II (ortholog); ASSOCIATED WITH autistic disorder (ortholog); end stage renal disease (ortholog) 2 154529051 154542114 + 30032202 116892176 MODEL JAAIVD010000001;XM_032893685;XM_032893686 XP_032749576;XP_032749577 splicing factor, arginine/serine-rich 19 protein-coding 625965718 Cep78 centrosomal protein 78 INVOLVED IN acrosome assembly (ortholog); cilium organization (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH cone-rod dystrophy (ortholog); Cone-Rod Dystrophy and Hearing Loss (ortholog); Cone-Rod Dystrophy and Hearing Loss 1 (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 2 15894432 15923027 - 22301074;30032202 116891002 MODEL JAAIVD010000001;XM_032891681 XP_032747572 centrosomal protein of 78 kDa protein-coding 625965737 Cep128 centrosomal protein 128 INVOLVED IN intracellular protein localization (ortholog); motile cilium assembly (ortholog); negative regulation of cilium assembly (ortholog); FOUND IN centriolar subdistal appendage (ortholog); centriole (ortholog); centrosome (ortholog) 7 104210591 104558652 - 116905331 MODEL JAAIVD010000026;XM_032908227 XP_032764118 centrosomal protein of 128 kDa protein-coding 625965767 LOC116889605 testis-specific Y-encoded protein 1 Y 1589675 1592990 + 22301074;30032202 116889605 MODEL JAAIVD010000015;XM_032890536 XP_032746427 protein-coding 625965777 Krt4 keratin 4 INVOLVED IN cytoskeleton organization (ortholog); epithelial cell differentiation (ortholog); negative regulation of epithelial cell proliferation (ortholog); ASSOCIATED WITH contact dermatitis (ortholog); genetic disease (ortholog); Genetic Skin Diseases (ortholog); FOUND IN cell surface (ortholog); intermediate filament cytoskeleton (ortholog); keratin filament (ortholog) 1 261155461 261161063 + 22301074;30032202 116890201 MODEL JAAIVD010000025;XM_032890935;XM_032890936 XP_032746826;XP_032746827 keratin, type II cytoskeletal 4 protein-coding 625965794 LOC116884083 small nucleolar RNA SNORA17 14 39469525 39469653 - 116884083 MODEL JAAIVD010000009;XR_004385827 snorna 625965797 Prrx2 paired related homeobox 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); HMG box domain binding (ortholog); protein dimerization activity (ortholog); INVOLVED IN artery morphogenesis (ortholog); cartilage development (ortholog); embryonic cranial skeleton morphogenesis (ortholog) 5 4740114 4775928 - 22301074 116900054 MODEL JAAIVD010000023;XM_032901847;XM_032901848 XP_032757738;XP_032757739 paired mesoderm homeobox protein 2 protein-coding 625965808 LOC116900686 calcineurin subunit B type 1-like 5 129580644 129581376 + 116900686 MODEL JAAIVD010000023 pseudo 625965809 LOC116912347 transmembrane protease serine 11G 11 78494329 78533400 + 22301074 116912347 MODEL JAAIVD010000006;XM_032916399;XM_032916400 XP_032772290;XP_032772291 protein-coding 625965824 COX1 ENCODES a protein that exhibits cytochrome-c oxidase activity (inferred); heme binding (inferred); metal ion binding (inferred); INVOLVED IN aerobic respiration (inferred); electron transport coupled proton transport (inferred); mitochondrial electron transport, cytochrome c to oxygen (inferred); FOUND IN membrane (inferred); mitochondrial inner membrane (inferred); respiratory chain complex IV (inferred) MT 5316 6860 + 7751801 A0A7T7FNV2;B7SE63;E1U5S2;N0DKW5 REVIEWED EU273707 ABX45235;YP_002791018 COI cytochrome c oxidase subunit I protein-coding 625965825 Trnay-gua transfer RNA tyrosine (anticodon GUA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 7 23197060 23197148 - 116906525 MODEL JAAIVD010000026 trna 625965826 Frem1 FRAS1 related extracellular matrix 1 INVOLVED IN cell-matrix adhesion (ortholog); craniofacial suture morphogenesis (ortholog); ASSOCIATED WITH anterior segment dysgenesis 5 (ortholog); Axenfeld-Rieger syndrome (ortholog); Bifid Nose (ortholog); FOUND IN basement membrane (ortholog) 1 70710759 70829496 + 22301074 116900657 MODEL JAAIVD010000025;XM_032902365;XM_032902370;XM_032902378 XP_032758256;XP_032758261;XP_032758269 FRAS1-related extracellular matrix protein 1 protein-coding 625965870 Efcab7 EF-hand calcium binding domain 7 INVOLVED IN positive regulation of protein import into nucleus (ortholog); positive regulation of protein localization to ciliary membrane (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Postaxial Polydactyly (ortholog); FOUND IN ciliary membrane (ortholog); cytoplasmic side of plasma membrane (ortholog); plasma membrane protein complex (ortholog) 1 54651274 54700456 - 22301074 116899845 MODEL JAAIVD010000025;XM_032901781 XP_032757672 EF-hand calcium-binding domain-containing protein 7 protein-coding 625965888 Cd3e CD3e molecule ENCODES a protein that exhibits identical protein binding (ortholog); MHC class II receptor activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); cell surface receptor signaling pathway (ortholog); cerebellum development (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH CD3epsilon deficiency (ortholog); Experimental Diabetes Mellitus (ortholog); gastrointestinal stromal tumor (ortholog); FOUND IN alpha-beta T cell receptor complex (ortholog); cell body (ortholog); cell-cell junction (ortholog) 8 39526297 39537391 - 22301074;30032202 116906921 MODEL JAAIVD010000027;XM_032909845 XP_032765736 T-cell surface glycoprotein CD3 epsilon chain protein-coding 625965900 Ddx6 DEAD-box helicase 6 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN miRNA-mediated gene silencing by inhibition of translation (ortholog); negative regulation of neuron differentiation (ortholog); negative regulation of translation (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH genetic disease (ortholog); INTELLECTUAL DEVELOPMENTAL DISORDER WITH IMPAIRED LANGUAGE AND DYSMORPHIC FACIES (ortholog); rheumatoid arthritis (ortholog); FOUND IN adherens junction (ortholog); chromatoid body (ortholog); concave side of sperm head (ortholog) 8 39147035 39180102 + 22301074;30032202 116908131 MODEL JAAIVD010000027;XM_032911417;XM_032911418;XM_032911419;XM_032911420;XM_032911421;XM_032911422 XP_032767308;XP_032767309;XP_032767310;XP_032767311;XP_032767312;XP_032767313 probable ATP-dependent RNA helicase DDX6 protein-coding 625965933 Lrrc34 leucine rich repeat containing 34 INVOLVED IN gene expression (ortholog); telomere maintenance (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Joubert syndrome (ortholog) 3 124854302 124873941 - 22301074 116896975 MODEL JAAIVD010000012;XM_032898556 XP_032754447 leucine-rich repeat-containing protein 34 protein-coding 625965948 LOC116892805 zinc finger CCCH domain-containing protein 14-like 2 186901448 186903588 - 22301074;30032202 116892805 MODEL JAAIVD010000001;XM_032894680 XP_032750571 protein-coding 625965953 LOC116901016 probable rRNA-processing protein EBP2 5 125371056 125371985 - 116901016 MODEL JAAIVD010000023 pseudo 625965954 LOC116887987 high mobility group protein B4-like X 72085781 72086437 + 116887987 MODEL JAAIVD010000014 pseudo 625965955 LOC116888191 uncharacterized LOC116888191 X 121627495 121796787 - 116888191 MODEL JAAIVD010000014 pseudo 625965956 LOC116887811 FYVE, RhoGEF and PH domain-containing protein 1-like X 30139468 30154334 - 116887811 MODEL JAAIVD010000014 pseudo 625965957 LOC116913040 U6 spliceosomal RNA 11 10153153 10153259 + 116913040 MODEL JAAIVD010000006;XR_004389577 snrna 625965960 Dusp12 dual specificity phosphatase 12 ENCODES a protein that exhibits kinase binding (ortholog); phosphatase activity (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN dephosphorylation (ortholog); positive regulation of hexokinase activity (ortholog); protein dephosphorylation (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 10 50069732 50079765 - 22301074;30032202 116911347 MODEL JAAIVD010000005;XM_032915264;XM_032915265 XP_032771155;XP_032771156 dual specificity protein phosphatase 12 protein-coding 625965972 LOC116895260 late cornified envelope protein 2D-like 3 1434502 1435081 + 22301074 116895260 MODEL JAAIVD010000012;XM_032896578 XP_032752469 protein-coding 625965976 LOC116908052 dihydropteridine reductase-like 8 479222 483075 - 116908052 MODEL JAAIVD010000027;XR_004388869 pseudo 625965979 LOC116890597 small nucleolar RNA SNORA17 1 3360707 3360818 + 116890597 MODEL JAAIVD010000025 pseudo 625965980 LOC116896009 60S ribosomal protein L4-like 3 174457235 174458529 - 116896009 MODEL JAAIVD010000012 pseudo 625965981 LOC116890608 small nucleolar RNA SNORD99 1 25938770 25938843 - 116890608 MODEL JAAIVD010000025;XR_004386759 snorna 625965984 Acvr2a activin A receptor type 2A ENCODES a protein that exhibits activin binding (ortholog); activin receptor activity (ortholog); activin receptor activity, type I (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); adrenal gland development (ortholog); anterior/posterior pattern specification (ortholog); PARTICIPATES IN activin signaling pathway; ASSOCIATED WITH cocaine dependence (ortholog); colon cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); inhibin-betaglycan-ActRII complex (ortholog) 5 26678656 26760826 + 22301074;30032202 116901389 MODEL JAAIVD010000023;XM_032903259;XM_032903260 XP_032759150;XP_032759151 activin receptor type-2A protein-coding 625966003 Cep104 centrosomal protein 104 ENCODES a protein that exhibits glutamate binding (ortholog); glycine binding (ortholog); identical protein binding (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal recessive intellectual developmental disorder 77 (ortholog); cerebellar ataxia (ortholog); FOUND IN centriole (ortholog); cilium (ortholog) 1 6709622 6742628 - 30032202 116892178 MODEL JAAIVD010000025;XM_032893696 XP_032749587 centrosomal protein of 104 kDa protein-coding 625966029 LOC116889625 hypoxanthine-guanine phosphoribosyltransferase-like Y 1424974 1429985 + 116889625 MODEL JAAIVD010000015 pseudo 625966030 Cplx4 complexin 4 ENCODES a protein that exhibits SNARE binding (ortholog); INVOLVED IN regulation of neurotransmitter secretion (ortholog); FOUND IN synapse (ortholog) 15 65296826 65312240 + 22301074;30032202 116885005 MODEL JAAIVD010000010;XM_032886241 XP_032742132 complexin-4 protein-coding 625966036 Usp25 ubiquitin specific peptidase 25 ENCODES a protein that exhibits ATPase binding (ortholog); cysteine-type deubiquitinase activity (ortholog); deubiquitinase activity (ortholog); INVOLVED IN I-kappaB phosphorylation (ortholog); immune response (ortholog); interleukin-17-mediated signaling pathway (ortholog); ASSOCIATED WITH Idiopathic Generalized Epilepsy 19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 4 64933321 65035118 - 22301074;30032202 116899047 MODEL JAAIVD010000003;XM_032900515;XM_032900516 XP_032756406;XP_032756407 ubiquitin carboxyl-terminal hydrolase 25 protein-coding 625966067 Ca1 carbonic anhydrase 1 ENCODES a protein that exhibits arylesterase activity (ortholog); carbonate dehydratase activity (ortholog); cyanamide hydratase activity (ortholog); INVOLVED IN response to fructose (ortholog); PARTICIPATES IN cimetidine pharmacodynamics pathway; esomeprazole pharmacodynamics pathway; famotidine pharmacodynamics pathway; ASSOCIATED WITH adenocarcinoma (ortholog); chronic pancreatitis (ortholog); colitis (ortholog) 3 157479415 157489891 + 22301074;30032202 116897081 MODEL JAAIVD010000012;XM_032898704 XP_032754595 protein-coding 625966078 Jmjd6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase ENCODES a protein that exhibits histone demethylase activity (ortholog); histone H3R2 demethylase activity (ortholog); histone H4R3 demethylase activity (ortholog); INVOLVED IN apoptotic cell clearance (ortholog); blood vessel development (ortholog); cell surface receptor signaling pathway (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); lung adenocarcinoma (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) 9 67236380 67242405 + 30032202 116910054 MODEL JAAIVD010000002;XM_032913855;XM_032913856;XR_004389125 XP_032769746;XP_032769747 bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 protein-coding 625966093 Edem1 ER degradation enhancing alpha-mannosidase like protein 1 ENCODES a protein that exhibits mannosyl-oligosaccharide 1,2-alpha-mannosidase activity (ortholog); misfolded protein binding (ortholog); INVOLVED IN endoplasmic reticulum mannose trimming (ortholog); ERAD pathway (ortholog); positive regulation of retrograde protein transport, ER to cytosol (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Zika fever (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum quality control compartment (ortholog) 6 37934495 37966920 - 22301074;30032202 116903437 MODEL JAAIVD010000024;XM_032905990 XP_032761881 ER degradation-enhancing alpha-mannosidase-like protein 1 protein-coding 625966109 Gramd2b GRAM domain containing 2B ENCODES a protein that exhibits identical protein binding (ortholog); FOUND IN cytoplasmic microtubule (ortholog) 15 75326015 75424367 - 116884301 MODEL JAAIVD010000010;XM_032885401;XM_032885402 XP_032741292;XP_032741293 GRAM domain-containing protein 2B protein-coding 625966130 Rab9b RAB9B, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); identical protein binding (ortholog); INVOLVED IN receptor-mediated endocytosis (ortholog); FOUND IN phagocytic vesicle (ortholog) X 88620334 88627887 - 22301074;30032202 116888813 MODEL JAAIVD010000014;XM_032890092 XP_032745983 ras-related protein Rab-9B protein-coding 625966137 Pcgf1 polycomb group ring finger 1 INVOLVED IN chromatin remodeling (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog); PcG protein complex (ortholog) 6 63143657 63146331 - 30032202 116903630 MODEL JAAIVD010000024;XM_032906289 XP_032762180 polycomb group RING finger protein 1 protein-coding 625966150 Majin membrane anchored junction protein INVOLVED IN double-strand break repair involved in meiotic recombination (ortholog); homologous chromosome pairing at meiosis (ortholog); meiotic attachment of telomere to nuclear envelope (ortholog); FOUND IN chromosome, telomeric region (ortholog); nuclear envelope (ortholog); nuclear inner membrane (ortholog) 2 1465250 1500759 - 22301074;30032202 116893594 MODEL JAAIVD010000001;XM_032895293;XM_032895294 XP_032751184;XP_032751185 membrane-anchored junction protein protein-coding 625966168 LOC116900497 olfactory receptor 4A5-like 5 71916161 71917105 - 22301074 116900497 MODEL JAAIVD010000023;XM_032902232 XP_032758123 protein-coding 625966171 LOC116895705 splicing factor 1-like 1 26333252 26335081 + 116895705 MODEL JAAIVD010000025;XM_032896899 XP_032752790 protein-coding 625966177 LOC116893575 60S ribosomal protein L13a-like 2 223162585 223163176 + 116893575 MODEL JAAIVD010000001 pseudo 625966178 LOC116910779 U6 spliceosomal RNA 9 95554600 95554702 - 116910779 MODEL JAAIVD010000002;XR_004389285 snrna 625966181 LOC116913801 granzyme B-like 12 68780021 68783081 - 116913801 MODEL JAAIVD010000007 pseudo 625966182 LOC116900326 olfactory receptor 10AG1-like 5 64469178 64470132 + 116900326 MODEL JAAIVD010000023 pseudo 625966183 LOC116886167 gamma-aminobutyric acid receptor-associated protein-like 2 17 31633979 31643263 + 30032202 116886167 MODEL JAAIVD010000011;XM_032887539 XP_032743430 protein-coding 625966189 Dut deoxyuridine triphosphatase ENCODES a protein that exhibits dUTP diphosphatase activity (ortholog); identical protein binding (ortholog); peroxisome proliferator activated receptor binding (ortholog); INVOLVED IN dTMP biosynthetic process (ortholog); dUMP biosynthetic process (ortholog); dUTP catabolic process (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; dihydropyrimidinase deficiency pathway; mitochondrial neurogastrointestinal encephalopathy syndrome pathway; ASSOCIATED WITH Bone Marrow Failure and Diabetes Mellitus Syndrome (ortholog); Brain Neoplasms (ortholog); High Myopia (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 5 103575331 103586962 + 22301074;30032202 116901902 MODEL JAAIVD010000023;XM_032904115;XM_032904116 XP_032760006;XP_032760007 deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial protein-coding 625966204 Hltf helicase like transcription factor ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); ATP-dependent chromatin remodeler activity (ortholog); DNA translocase activity (ortholog); INVOLVED IN chromosomal DNA methylation maintenance following DNA replication (ortholog); DNA damage response (ortholog); mRNA transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Kidney Neoplasms (ortholog); FOUND IN chromatin (ortholog); nuclear replication fork (ortholog); nucleoplasm (ortholog) 3 134009970 134070919 - 22301074 116897000 MODEL JAAIVD010000012;XM_032898605 XP_032754496 helicase-like transcription factor protein-coding 625966233 LOC116888445 charged multivesicular body protein 1b-2 X 61155866 61195637 + 30032202 116888445 MODEL JAAIVD010000014;XM_032889720 XP_032745611 protein-coding 625966243 Nsl1 NSL1 component of MIS12 kinetochore complex FOUND IN kinetochore (ortholog); MIS12/MIND type complex (ortholog); nuclear speck (ortholog) 10 69148807 69172415 + 22301074;30032202 116911240 MODEL JAAIVD010000005;XM_032915141;XM_032915142;XM_032915143 XP_032771032;XP_032771033;XP_032771034 kinetochore-associated protein NSL1 homolog protein-coding 625966264 LOC116893201 olfactory receptor 10A3-like 2 106718491 106719460 + 116893201 MODEL JAAIVD010000001 pseudo 625966265 LOC116899082 G1/S-specific cyclin-D3 4 82278650 82284850 - 30032202 116899082 MODEL JAAIVD010000003;XM_032900582 XP_032756473 protein-coding 625966273 Lgi1 leucine rich glioma inactivated 1 ENCODES a protein that exhibits receptor ligand activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN axon guidance (ortholog); neuron projection development (ortholog); neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); ASSOCIATED WITH autosomal dominant nocturnal frontal lobe epilepsy (ortholog); Developmental and Epileptic Encephalopathy 121 (ortholog); epilepsy (ortholog); FOUND IN axon initial segment (ortholog); cytoplasm (ortholog); dendrite (ortholog) 2 35451516 35493263 - 22301074;30032202 116891121 MODEL JAAIVD010000001;XM_032891837 XP_032747728 leucine-rich glioma-inactivated protein 1 protein-coding 625966285 LOC116899660 bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial-like 1 52665717 52667014 + 22301074;30032202 116899660 MODEL JAAIVD010000025;XM_032901674 XP_032757565 protein-coding 625966290 Tbc1d10a TBC1 domain family member 10A ENCODES a protein that exhibits GTPase activator activity (ortholog); PDZ domain binding (ortholog); INVOLVED IN positive regulation of proteolysis (ortholog); regulation of cilium assembly (ortholog); retrograde transport, endosome to Golgi (ortholog); FOUND IN plasma membrane (ortholog) 11 73167876 73195844 + 116912380 MODEL JAAIVD010000006;XM_032916439 XP_032772330 protein-coding 625966303 LOC116911354 uncharacterized LOC116911354 10 61265104 61267541 + 116911354 MODEL JAAIVD010000005;XR_004389322 ncrna 625966307 LOC116883691 glyceraldehyde-3-phosphate dehydrogenase-like 14 6117778 6118819 - 116883691 MODEL JAAIVD010000009 pseudo 625966308 LOC116899941 U2 spliceosomal RNA 4 86146582 86146747 - 116899941 MODEL JAAIVD010000003 pseudo 625966309 LOC116884073 U1 spliceosomal RNA 14 30899619 30899719 + 116884073 MODEL JAAIVD010000009 pseudo 625966310 LOC116892067 protein kinase C-binding protein NELL1-like 2 149561241 149637396 - 22301074 116892067 MODEL JAAIVD010000001;XM_032893539 XP_032749430 protein-coding 625966322 Skap1 src kinase associated phosphoprotein 1 ENCODES a protein that exhibits protein kinase binding (ortholog); protein phosphatase binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN positive regulation of adaptive immune response (ortholog); positive regulation of cell adhesion (ortholog); positive regulation of cell-cell adhesion mediated by integrin (ortholog); ASSOCIATED WITH Ovarian Neoplasms (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 57630098 57926683 - 22301074;30032202 116909282 MODEL JAAIVD010000002;XM_032912818 XP_032768709 src kinase-associated phosphoprotein 1 protein-coding 625966339 Abhd16a abhydrolase domain containing 16A, phospholipase ENCODES a protein that exhibits glycerophospholipase activity (ortholog); monoacylglycerol lipase activity (ortholog); phosphatidylcholine lysophospholipase A1 activity (ortholog); INVOLVED IN monoacylglycerol catabolic process (ortholog); phosphatidylserine catabolic process (ortholog); prostaglandin catabolic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary spastic paraplegia (ortholog); hereditary spastic paraplegia 86 (ortholog) 18 7687580 7702464 + 30032202 116887056 MODEL JAAIVD010000013;XM_032888545 XP_032744436 phosphatidylserine lipase ABHD16A protein-coding 625966363 LOC116904748 small nucleolar RNA SNORA17 6 39042319 39042433 - 116904748 MODEL JAAIVD010000024 pseudo 625966364 LOC116898324 transmembrane protein 45A-like 4 41131699 41145216 - 116898324 MODEL JAAIVD010000003;XM_032899658 XP_032755549 protein-coding 625966373 LOC116891593 uncharacterized LOC116891593 2 81808266 81810912 - 116891593 MODEL JAAIVD010000001;XR_004386849 ncrna 625966378 LOC116904747 small nucleolar RNA SNORA17 6 148219171 148219279 + 116904747 MODEL JAAIVD010000024 pseudo 625966379 Wdr26 WD repeat domain 26 ASSOCIATED WITH Developmental Disease (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 10 59529940 59571874 - 22301074;30032202 116911729 MODEL JAAIVD010000005;XM_032915707;XM_032915708;XM_032915709;XM_032915710 XP_032771598;XP_032771599;XP_032771600;XP_032771601 WD repeat-containing protein 26 protein-coding 625966407 LOC116908402 small nucleolar RNA SNORA17 8 29541981 29542112 + 116908402 MODEL JAAIVD010000027;XR_004388946 snorna 625966410 Aip AHR interacting HSP90 co-chaperone ENCODES a protein that exhibits aryl hydrocarbon receptor binding (ortholog); enzyme binding (ortholog); GAF domain binding (ortholog); INVOLVED IN protein localization to mitochondrion (ortholog); protein maturation (ortholog); xenobiotic metabolic process (ortholog); ASSOCIATED WITH ACTH-secreting pituitary adenoma (ortholog); adenoma (ortholog); Familial Isolated Pituitary Adenoma (ortholog); FOUND IN aryl hydrocarbon receptor complex (ortholog); cytosol (ortholog); membrane (ortholog) 2 3516520 3527578 + 22301074 116890789 MODEL JAAIVD010000001;XM_032891262;XM_032891263 XP_032747153;XP_032747154 AH receptor-interacting protein;aryl hydrocarbon receptor interacting protein protein-coding 625966424 Has2 hyaluronan synthase 2 ENCODES a protein that exhibits hyaluronan synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN atrioventricular canal development (ortholog); bone morphogenesis (ortholog); cellular response to fluid shear stress (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); diabetes insipidus (ortholog); Diabetic Nephropathies (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); endoplasmic reticulum membrane (ortholog) 1 231705602 231731410 + 30032202 116890097 MODEL JAAIVD010000025;XM_032890846 XP_032746737 protein-coding 625966432 LOC116913859 non-histone chromosomal protein HMG-17-like 12 57461654 57461904 - 116913859 MODEL JAAIVD010000007 pseudo 625966433 Azgp1 alpha-2-glycoprotein 1, zinc-binding INVOLVED IN cell adhesion (ortholog); cellular response to insulin stimulus (ortholog); cellular response to magnesium ion (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); adenocarcinoma (ortholog); Cachexia (ortholog); FOUND IN extracellular region (ortholog) 16 15433631 15439786 + 30032202 116885790 MODEL JAAIVD010000004;XM_032887122 XP_032743013 zinc-alpha-2-glycoprotein protein-coding 625966441 Abcc6 ATP binding cassette subfamily C member 6 ENCODES a protein that exhibits ABC-type glutathione S-conjugate transporter activity (ortholog); ABC-type xenobiotic transporter activity (ortholog); ATP binding (ortholog); INVOLVED IN ATP metabolic process (ortholog); ATP transport (ortholog); calcium ion homeostasis (ortholog); PARTICIPATES IN multidrug resistance-associated protein mediated transport pathway; ASSOCIATED WITH Animal Disease Models (ortholog); arterial calcification of infancy (ortholog); beta thalassemia (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) 2 153492676 153545901 + 22301074;30032202 116892114 MODEL JAAIVD010000001;XM_032893592 XP_032749483 multidrug resistance-associated protein 6 protein-coding 625966476 Slc25a30 solute carrier family 25 member 30 ENCODES a protein that exhibits solute:inorganic anion antiporter activity (ortholog); INVOLVED IN inorganic anion transport (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN mitochondrion (ortholog) 12 48625102 48646938 + 22301074 116913572 MODEL JAAIVD010000007;XM_032917791 XP_032773682 kidney mitochondrial carrier protein 1 protein-coding 625966490 Pcif1 phosphorylated CTD interacting factor 1 ENCODES a protein that exhibits mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity (ortholog); RNA polymerase II C-terminal domain binding (ortholog); RNA polymerase II C-terminal domain phosphoserine binding (ortholog); INVOLVED IN mRNA processing (ortholog); negative regulation of translation (ortholog); positive regulation of translation (ortholog); FOUND IN intercellular bridge (ortholog); microtubule cytoskeleton (ortholog); nucleoplasm (ortholog) 5 153068216 153080935 - 30032202 116902342 MODEL JAAIVD010000023;XM_032904823;XM_032904824 XP_032760714;XP_032760715 PDX1 C-terminal inhibiting factor 1;mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase protein-coding 625966514 LOC116892821 E3 ubiquitin-protein ligase parkin 2 190386386 190802056 + 22301074;30032202 116892821 MODEL JAAIVD010000001;XM_032894706 XP_032750597 protein-coding 625966524 LOC116904739 small nucleolar RNA SNORA17 6 146906078 146906195 + 116904739 MODEL JAAIVD010000024 pseudo 625966525 LOC116905601 spermatogenesis-associated serine-rich protein 2-like 7 10951482 11009310 - 116905601 MODEL JAAIVD010000026 pseudo 625966526 LOC116887720 5S ribosomal RNA 18 16685560 16685662 + 116887720 MODEL JAAIVD010000013 pseudo 625966527 Ilf3 interleukin enhancer binding factor 3 ENCODES a protein that exhibits DNA binding (ortholog); double-stranded RNA binding (ortholog); enzyme binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of translation (ortholog); negative regulation of viral genome replication (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleolus (ortholog) 8 17639954 17678174 + 22301074;30032202 116906600 MODEL JAAIVD010000027;XM_032909343;XM_032909344;XM_032909345;XM_032909346;XM_032909347;XM_032909348;XM_032909349;XM_032909350 XP_032765234;XP_032765235;XP_032765236;XP_032765237;XP_032765238;XP_032765239;XP_032765240;XP_032765241 interleukin enhancer-binding factor 3 protein-coding 625966569 Zc3h12d zinc finger CCCH-type containing 12D INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); mRNA catabolic process (ortholog); negative regulation of cell growth (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); nucleoplasm (ortholog) 2 229172853 229206178 - 22301074;30032202 116893034 MODEL JAAIVD010000001;XM_032894998 XP_032750889 probable ribonuclease ZC3H12D protein-coding 625966579 LOC116908193 peptidyl-prolyl cis-trans isomerase A-like 8 57406626 57407345 + 116908193 MODEL JAAIVD010000027 pseudo 625966580 Ahnak2 AHNAK nucleoprotein 2 ASSOCIATED WITH cerebellar ataxia (ortholog); FOUND IN costamere (ortholog); cytoplasmic vesicle membrane (ortholog); cytosol (ortholog) 7 130361508 130400169 - 22301074;30032202 116906276 MODEL JAAIVD010000026;XM_032909162 XP_032765053 protein AHNAK2 protein-coding 625966595 Mrps30 mitochondrial ribosomal protein S30 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 3 178302546 178309539 + 22301074;30032202 116897173 MODEL JAAIVD010000012;XM_032898858 XP_032754749 39S ribosomal protein S30, mitochondrial protein-coding 625966604 Camlg calcium modulating ligand ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN B cell homeostasis (ortholog); negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); negative regulation of protein ubiquitination (ortholog); ASSOCIATED WITH congenital disorder of glycosylation type IIz (ortholog); myeloid leukemia (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 14 73941241 73952038 + 30032202 116883643 MODEL JAAIVD010000009;XM_032884832;XM_032884833 XP_032740723;XP_032740724 calcium signal-modulating cyclophilin ligand protein-coding 625966615 LOC116914147 small nucleolar RNA SNORA17 12 1060185 1060281 - 116914147 MODEL JAAIVD010000007 pseudo 625966616 LOC116909723 signal transducer and activator of transcription 5A 9 60151564 60175549 + 30032202 116909723 MODEL JAAIVD010000002;XM_032913399 XP_032769290 protein-coding 625966639 Efcab8 EF-hand calcium binding domain 8 5 133102303 133174552 + 22301074 116902152 MODEL JAAIVD010000023;XM_032904486 XP_032760377 EF-hand calcium-binding domain-containing protein 8 protein-coding 625966670 Trnai-uau transfer RNA isoleucine (anticodon UAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 7 9088961 9089053 - 116906530 MODEL JAAIVD010000026 trna 625966671 Asap2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 FOUND IN cytosol (ortholog); plasma membrane (ortholog) 7 37650805 37811617 + 22301074;30032202 116906035 MODEL JAAIVD010000026;XM_032909094 XP_032764985 arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 protein-coding 625966704 LOC116907392 uncharacterized LOC116907392 8 54017077 54020674 - 116907392 MODEL JAAIVD010000027;XR_004388824 ncrna 625966709 LOC116890587 small nucleolar RNA SNORA17 1 81434747 81434872 + 116890587 MODEL JAAIVD010000025;XR_004386747 snorna 625966712 LOC116894616 vomeronasal type-2 receptor 116-like 2 185732882 185747317 - 22301074;30032202 116894616 MODEL JAAIVD010000001;XM_032896330 XP_032752221 protein-coding 625966720 Sema6c semaphorin 6C ENCODES a protein that exhibits semaphorin receptor binding (ortholog); INVOLVED IN axon guidance (ortholog); negative regulation of axon extension (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog) 3 62077596 62090961 - 30032202 116896563 MODEL JAAIVD010000012;XM_032897760;XM_032897761;XM_032897762;XM_032897763;XM_032897764;XM_032897765;XM_032897766;XM_032897767;XM_032897768;XM_032897769 XP_032753651;XP_032753652;XP_032753653;XP_032753654;XP_032753655;XP_032753656;XP_032753657;XP_032753658;XP_032753659;XP_032753660 semaphorin-6C protein-coding 625966762 Wnt8b Wnt family member 8B ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); negative regulation of gene expression (ortholog); positive regulation of gene expression (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH Hirschsprung's disease (ortholog) 2 44000777 44020136 + 22301074;30032202 116893803 MODEL JAAIVD010000001;XM_032895506 XP_032751397 protein Wnt-8b protein-coding 625966771 LOC116908237 extensin-like 8 84160988 84163377 + 116908237 MODEL JAAIVD010000027;XM_032911499 XP_032767390 protein-coding 625966775 LOC116884118 U6 spliceosomal RNA 14 17563028 17563131 - 116884118 MODEL JAAIVD010000009;XR_004385849 snrna 625966778 LOC116903131 olfactory receptor 6C2-like 6 7826374 7827311 + 22301074;30032202 116903131 MODEL JAAIVD010000024;XM_032905487 XP_032761378 protein-coding 625966781 Actn1 actinin alpha 1 ENCODES a protein that exhibits actin filament binding (ortholog); cytoskeletal regulatory protein binding (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); actin filament network formation (ortholog); actin filament organization (ortholog); PARTICIPATES IN E-cadherin signaling pathway; syndecan signaling pathway; ASSOCIATED WITH Diabetic Nephropathies (ortholog); Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); FOUND IN actin filament (ortholog); brush border (ortholog); cell junction (ortholog) 7 94253955 94348380 - 22301074;30032202 116905211 MODEL JAAIVD010000026;XM_032908024;XM_032908025;XM_032908026 XP_032763915;XP_032763916;XP_032763917 alpha-actinin-1 protein-coding 625966811 Mettl23 methyltransferase 23, arginine ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); heat shock protein binding (ortholog); histone H3R17 methyltransferase activity (ortholog); INVOLVED IN cognition (ortholog); epigenetic programing of male pronucleus (ortholog); epigenetic programming in the zygotic pronuclei (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 44 (ortholog); genetic disease (ortholog); glaucoma (ortholog); FOUND IN cytoplasm (ortholog); female pronucleus (ortholog); male pronucleus (ortholog) 9 67231548 67236486 - 30032202 116910055 MODEL JAAIVD010000002;XM_032913857;XM_032913858 XP_032769748;XP_032769749 methyltransferase like 23;methyltransferase-like protein 23 protein-coding 625966823 Smim20 small integral membrane protein 20 INVOLVED IN mitochondrial respiratory chain complex IV assembly (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 11 52860075 52871507 - 22301074;30032202 116912503 MODEL JAAIVD010000006;XM_032916590 XP_032772481 protein-coding 625966830 Ctif cap binding complex dependent translation initiation factor INVOLVED IN nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); regulation of translational initiation (ortholog); FOUND IN cytosol (ortholog); perinuclear region of cytoplasm (ortholog) 15 56262902 56532088 + 22301074;30032202 116884873 MODEL JAAIVD010000010;XM_032886116;XM_032886117;XM_032886118;XM_032886119;XM_032886120 XP_032742007;XP_032742008;XP_032742009;XP_032742010;XP_032742011 CBP80/20-dependent translation initiation factor protein-coding 625966855 Plk2 polo like kinase 2 ENCODES a protein that exhibits ATP-dependent protein binding (ortholog); ATPase binding (ortholog); clathrin heavy chain binding (ortholog); INVOLVED IN G1/S transition of mitotic cell cycle (ortholog); long-term synaptic depression (ortholog); long-term synaptic potentiation (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); chromatin (ortholog) 3 186628043 186633827 - 22301074;30032202 116897201 MODEL JAAIVD010000012;XM_032898905 XP_032754796 serine/threonine-protein kinase PLK2 protein-coding 625966873 Ripor2 RHO family interacting cell polarization regulator 2 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN auditory receptor cell stereocilium organization (ortholog); cellular response to chemokine (ortholog); cellular response to mechanical stimulus (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 21 (ortholog); autosomal recessive nonsyndromic deafness 104 (ortholog); nonsyndromic deafness (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytoskeleton (ortholog) 14 43700304 43789743 + 116884064 MODEL JAAIVD010000009;XM_032885309;XM_032885310;XM_032885312;XM_032885313;XM_032885314 XP_032741200;XP_032741201;XP_032741203;XP_032741204;XP_032741205 rho family-interacting cell polarization regulator 2 protein-coding 625966909 Hnrnpk heterogeneous nuclear ribonucleoprotein K ENCODES a protein that exhibits actinin binding (ortholog); ATPase binding (ortholog); C-rich single-stranded DNA binding (ortholog); INVOLVED IN acute-phase response (ortholog); camera-type eye development (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Au-Kline Syndrome (ortholog); brain disease (ortholog); FOUND IN axon terminus (ortholog); catalytic step 2 spliceosome (ortholog); cell cortex (ortholog) 14 79732082 79744239 + 30032202 116884033 MODEL JAAIVD010000009;XM_032885269;XM_032885270;XM_032885271;XM_032885272;XM_032885273 XP_032741160;XP_032741161;XP_032741162;XP_032741163;XP_032741164 protein-coding 625966940 Clxn calaxin INVOLVED IN regulation of cilium movement (ortholog); regulation of flagellated sperm motility (ortholog); ASSOCIATED WITH Primary Ciliary Dyskinesia 53 (ortholog); FOUND IN cilium (ortholog); sperm flagellum (ortholog) 4 312870 327551 + 22301074;30032202 116898602 MODEL JAAIVD010000003;XM_032899796;XM_032899797 XP_032755687;XP_032755688 Efcab1 EF-hand calcium binding domain 1;EF-hand calcium-binding domain-containing protein 1 protein-coding 625966953 Angpt2 angiopoietin 2 ENCODES a protein that exhibits receptor ligand activity (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN angiogenesis (ortholog); animal organ regeneration (ortholog); blood vessel morphogenesis (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); adenocarcinoma (ortholog); alcohol-associated liver disease (ortholog); FOUND IN cell projection (ortholog); extracellular region (ortholog) 13 65450983 65503486 + 30032202 116914450 MODEL JAAIVD010000008;XM_032918751 XP_032774642 angiopoietin-2 protein-coding 625966966 Smim23 small integral membrane protein 23 9 5650162 5653548 - 116910590 MODEL JAAIVD010000002;XM_032914513 XP_032770404 protein-coding 625966974 Ammecr1l AMMECR1 like 15 12459567 12483555 - 116884426 MODEL JAAIVD010000010;XM_032885514;XM_032885515 XP_032741405;XP_032741406 AMMECR1-like protein protein-coding 625966989 LOC116897426 U6 spliceosomal RNA 3 220119294 220119366 - 116897426 MODEL JAAIVD010000012 pseudo 625966990 LOC116884020 olfactory receptor 12-like 14 74498384 74499310 + 22301074;30032202 116884020 MODEL JAAIVD010000009;XM_032885258 XP_032741149 protein-coding 625966993 LOC116886549 CKLF-like MARVEL transmembrane domain-containing protein 2A 17 12575339 12582451 - 22301074 116886549 MODEL JAAIVD010000011;XM_032888067;XM_032888068 XP_032743958;XP_032743959 protein-coding 625967006 LOC116897568 small nucleolar RNA SNORA17 3 32339727 32339855 - 116897568 MODEL JAAIVD010000012;XR_004387579 snorna 625967009 LOC116893358 uncharacterized protein C2orf78 homolog 2 160276132 160282465 + 116893358 MODEL JAAIVD010000001;XM_032895163 XP_032751054 protein-coding 625967014 Reln reelin ENCODES a protein that exhibits lipoprotein particle receptor binding (ortholog); receptor ligand activity (ortholog); serine-type peptidase activity (ortholog); INVOLVED IN associative learning (ortholog); axon guidance (ortholog); brain development (ortholog); PARTICIPATES IN altered Reelin signaling pathway; Reelin signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Ataxia (ortholog); autism spectrum disorder (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendrite (ortholog) 6 151190879 151615949 - 30032202 116904184 MODEL JAAIVD010000024;XM_032907091 XP_032762982 protein-coding 625967083 LOC116888122 ferritin light chain 1-like X 103492287 103492935 - 116888122 MODEL JAAIVD010000014 pseudo 625967084 LOC116903927 uncharacterized LOC116903927 6 100205324 100206566 + 116903927 MODEL JAAIVD010000024;XR_004388312 ncrna 625967088 LOC116910383 schlafen family member 12-like 9 87424249 87428597 - 116910383 MODEL JAAIVD010000002;XM_032914227 XP_032770118 protein-coding 625967093 Iyd iodotyrosine deiodinase ENCODES a protein that exhibits FMN binding (ortholog); iodotyrosine deiodinase activity (ortholog); INVOLVED IN thyroid hormone metabolic process (ortholog); tyrosine metabolic process (ortholog); ASSOCIATED WITH congenital hypothyroidism (ortholog); Experimental Liver Cirrhosis (ortholog); thyroid dyshormonogenesis 4 (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); plasma membrane (ortholog) 2 198349945 198365385 + 22301074;30032202 116894641 MODEL JAAIVD010000001;XM_032896354 XP_032752245 iodotyrosine deiodinase 1 protein-coding 625967102 Relb RELB proto-oncogene, NF-kB subunit ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); cellular response to osmotic stress (ortholog); circadian regulation of gene expression (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); atopic dermatitis (ortholog); breast cancer (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); cytosol (ortholog) 2 170989336 171016937 + 22301074;30032202 116892506 MODEL JAAIVD010000001;XM_032894253;XM_032894254;XM_032894255;XM_032894257;XM_032894258 XP_032750144;XP_032750145;XP_032750146;XP_032750148;XP_032750149 transcription factor RelB protein-coding 625967125 Adgrl3 adhesion G protein-coupled receptor L3 ENCODES a protein that exhibits calcium ion binding (ortholog); cell adhesion mediator activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cell-cell adhesion (ortholog); excitatory synapse assembly (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); Reperfusion Injury (ortholog); FOUND IN axon (ortholog); cell-cell junction (ortholog); glutamatergic synapse (ortholog) 11 38073807 38566091 - 22301074;30032202 116912680 MODEL JAAIVD010000006;XM_032916797;XM_032916798;XM_032916799;XM_032916800;XM_032916802;XM_032916803;XM_032916804;XM_032916805;XM_032916806;XM_032916807;XM_032916808;XM_032916809;XM_032916810;XM_032916811;XM_032916813;XM_032916814;XM_032916815;XM_032916816;XM_032916817;XM_032916818 XP_032772688;XP_032772689;XP_032772690;XP_032772691;XP_032772693;XP_032772694;XP_032772695;XP_032772696;XP_032772697;XP_032772698;XP_032772699;XP_032772700;XP_032772701;XP_032772702;XP_032772704;XP_032772705;XP_032772706;XP_032772707;XP_032772708;XP_032772709 protein-coding 625967184 LOC116904339 nucleophosmin-like 6 69918145 69919137 - 116904339 MODEL JAAIVD010000024 pseudo 625967185 LOC116897389 U6 spliceosomal RNA 3 202543708 202543814 - 116897389 MODEL JAAIVD010000012;XR_004387433 snrna 625967188 LOC116887632 zinc finger protein 431-like 18 10865331 10872954 + 22301074;30032202 116887632 MODEL JAAIVD010000013;XM_032889231 XP_032745122 protein-coding 625967196 LOC116903852 zinc finger and SCAN domain-containing protein 2-like 6 92339330 92342895 - 30032202 116903852 MODEL JAAIVD010000024;XM_032906584;XM_032906586;XM_032906587;XM_032906588;XR_004388305 XP_032762475;XP_032762477;XP_032762478;XP_032762479 protein-coding 625967212 Ucp1 uncoupling protein 1 ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); long-chain fatty acid binding (ortholog); INVOLVED IN adaptive thermogenesis (ortholog); brown fat cell differentiation (ortholog); cellular response to cold (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); congestive heart failure (ortholog); dilated cardiomyopathy (ortholog); FOUND IN mitochondrial envelope (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 17 16930174 16937909 - 22301074;30032202 116886329 MODEL JAAIVD010000011;XM_032887778 XP_032743669 mitochondrial brown fat uncoupling protein 1 protein-coding 625967220 LOC116885464 insulin receptor substrate 1-like 16 16380155 16382468 + 30032202 116885464 MODEL JAAIVD010000004;XM_032886746 XP_032742637 protein-coding 625967226 Crygs crystallin gamma S ENCODES a protein that exhibits structural constituent of eye lens (ortholog); INVOLVED IN lens development in camera-type eye (ortholog); morphogenesis of an epithelium (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 20 multiple types (ortholog); genetic disease (ortholog) 4 7490663 7495807 - 30032202 116897807 MODEL JAAIVD010000003;XM_032899221 XP_032755112 gamma-crystallin S protein-coding 625967233 LOC116896302 uncharacterized LOC116896302 3 37554331 37560021 + 116896302 MODEL JAAIVD010000012;XM_032897388;XM_032897389;XM_032897390 XP_032753279;XP_032753280;XP_032753281 uncharacterized protein LOC116896302 protein-coding 625967246 Rab26 RAB26, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GMP binding (ortholog); GTP binding (ortholog); INVOLVED IN exocrine system development (ortholog); Golgi to plasma membrane protein transport (ortholog); regulated exocytosis (ortholog); FOUND IN Golgi membrane (ortholog); plasma membrane (ortholog); secretory granule membrane (ortholog) 9 1812402 1817040 - 22301074;30032202 116909977 MODEL JAAIVD010000002;XM_032913758;XM_032913759;XM_032913760;XM_032913761 XP_032769649;XP_032769650;XP_032769651;XP_032769652 ras-related protein Rab-26 protein-coding 625967264 LOC116885665 sorbitol dehydrogenase-like 1 247646 248509 + 116885665 MODEL JAAIVD010000025 pseudo 625967265 Gbgt1 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) ENCODES a protein that exhibits globoside alpha-N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN globoside metabolic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog) 5 8174330 8182433 - 22301074;30032202 116900005 MODEL JAAIVD010000023;XM_032901810 XP_032757701 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 protein-coding 625967271 LOC116893681 olfactory receptor 1440 2 12408540 12409606 + 22301074;30032202 116893681 MODEL JAAIVD010000001;XM_032895398 XP_032751289 protein-coding 625967275 LOC116884851 uncharacterized LOC116884851 1 271629625 271632683 + 116884851 MODEL JAAIVD010000025;XR_004385904 ncrna 625967280 Tgif1 TGFB induced factor homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); co-SMAD binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); determination of left/right symmetry (ortholog); dorsal/ventral pattern formation (ortholog); ASSOCIATED WITH Diabetic Nephropathies (ortholog); disorder of sexual development (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 4 180314261 180321724 - 30032202 116899710 MODEL JAAIVD010000003;XM_032901746 XP_032757637 homeobox protein TGIF1 protein-coding 625967287 Hoxa11 homeobox A11 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); bone development (ortholog); branching involved in ureteric bud morphogenesis (ortholog); ASSOCIATED WITH Congenital Limb Deformities (ortholog); Contracture (ortholog); Endometrial Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog); protein-containing complex (ortholog); protein-DNA complex (ortholog) 6 88816578 88820420 + 22301074;30032202 116903798 MODEL JAAIVD010000024;XM_032906490 XP_032762381 homeobox protein Hox-A11 protein-coding 625967293 LOC116894144 olfactory receptor 52K1-like 2 104110604 104111554 - 22301074 116894144 MODEL JAAIVD010000001;XM_032895861 XP_032751752 protein-coding 625967296 Tnk1 tyrosine kinase non receptor 1 ENCODES a protein that exhibits ATP binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of Ras protein signal transduction (ortholog); protein autophosphorylation (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 54 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) 9 49457762 49463882 - 22301074;30032202 116909398 MODEL JAAIVD010000002;XM_032912961;XM_032912962;XM_032912963 XP_032768852;XP_032768853;XP_032768854 non-receptor tyrosine-protein kinase TNK1 protein-coding 625967317 Ddx55 DEAD-box helicase 55 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); large ribosomal subunit rRNA binding (ortholog); INVOLVED IN maturation of LSU-rRNA (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 16 29304734 29320328 - 22301074;30032202 116885395 MODEL JAAIVD010000004;XM_032886675 XP_032742566 ATP-dependent RNA helicase DDX55 protein-coding 625967335 Rmnd5a required for meiotic nuclear division 5 homolog A FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 6 74393421 74451350 - 22301074;30032202 116903684 MODEL JAAIVD010000024;XM_032906346;XM_032906347 XP_032762237;XP_032762238 E3 ubiquitin-protein transferase RMND5A protein-coding 625967351 LOC116912906 40S ribosomal protein S29-like 11 67371043 67371195 + 116912906 MODEL JAAIVD010000006 pseudo 625967352 Tango6 transport and golgi organization 6 homolog ASSOCIATED WITH myoepithelioma (ortholog) 17 26400480 26580789 + 30032202 116886345 MODEL JAAIVD010000011;XM_032887797 XP_032743688 transport and Golgi organization protein 6 homolog protein-coding 625967374 Wipf3 WAS/WASL interacting protein family member 3 ENCODES a protein that exhibits SH3 domain binding (ortholog); FOUND IN synapse (ortholog) 6 86577686 86628011 - 22301074;30032202 116903773 MODEL JAAIVD010000024;XM_032906463 XP_032762354 WAS/WASL-interacting protein family member 3 protein-coding 625967386 LOC116891127 uncharacterized LOC116891127 2 35736299 35743067 - 116891127 MODEL JAAIVD010000001;XR_004386818 ncrna 625967390 Idh3g isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma ENCODES a protein that exhibits enzyme activator activity (ortholog); isocitrate dehydrogenase (NAD+) activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN isocitrate metabolic process (ortholog); tricarboxylic acid cycle (ortholog); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; mitochondrial complex II deficiency pathway; ASSOCIATED WITH Emery-Dreifuss muscular dystrophy (ortholog); retinitis pigmentosa 99 (ortholog); spastic quadriplegic cerebral palsy (ortholog); FOUND IN isocitrate dehydrogenase complex (NAD+) (ortholog); mitochondrion (ortholog); photoreceptor inner segment (ortholog) X 128794347 128803098 + 22301074;30032202 116889118 MODEL JAAIVD010000014;XM_032890286;XM_032890287;XM_032890288;XM_032890289;XM_032890290 XP_032746177;XP_032746178;XP_032746179;XP_032746180;XP_032746181 isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial protein-coding 625967419 LOC116890506 U1 spliceosomal RNA 1 9798516 9798673 - 116890506 MODEL JAAIVD010000025;XR_004386691 snrna 625967422 LOC116890070 vomeronasal type-1 receptor 4-like 1 214917285 214918261 - 22301074;30032202 116890070 MODEL JAAIVD010000025;XM_032890832 XP_032746723 protein-coding 625967425 LOC116883404 40S ribosomal protein S6-like 14 34266649 34267470 + 22301074;30032202 116883404 MODEL JAAIVD010000009;XM_032884527 XP_032740418 protein-coding 625967430 Slmap sarcolemma associated protein ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN negative regulation of hippo signaling (ortholog); protein localization to plasma membrane (ortholog); regulation of membrane depolarization during cardiac muscle cell action potential (ortholog); ASSOCIATED WITH Brugada syndrome (ortholog); cardiac arrest (ortholog); long QT syndrome (ortholog); FOUND IN cytoplasm (ortholog); FAR/SIN/STRIPAK complex (ortholog); membrane (ortholog) 13 2218610 2333295 - 22301074;30032202 116914625 MODEL JAAIVD010000008;XM_032918989;XM_032918990;XM_032918991;XM_032918992;XM_032918993;XM_032918994;XM_032918995;XM_032918996;XM_032918997;XM_032918998;XM_032918999;XM_032919000;XM_032919001;XM_032919002;XM_032919003;XM_032919005;XM_032919006;XM_032919007;XM_032919008;XM_032919009;XM_032919010;XM_032919011;XM_032919012;XM_032919013;XM_032919014 XP_032774880;XP_032774881;XP_032774882;XP_032774883;XP_032774884;XP_032774885;XP_032774886;XP_032774887;XP_032774888;XP_032774889;XP_032774890;XP_032774891;XP_032774892;XP_032774893;XP_032774894;XP_032774896;XP_032774897;XP_032774898;XP_032774899;XP_032774900;XP_032774901;XP_032774902;XP_032774903;XP_032774904;XP_032774905 sarcolemmal membrane-associated protein protein-coding 625967491 Mri1 methylthioribose-1-phosphate isomerase 1 ENCODES a protein that exhibits identical protein binding (ortholog); S-methyl-5-thioribose-1-phosphate isomerase activity (ortholog); INVOLVED IN L-methionine cycle (ortholog); ASSOCIATED WITH neurodegenerative disease (ortholog); FOUND IN nucleoplasm (ortholog) 17 16035337 16041222 + 30032202 116886476 MODEL JAAIVD010000011;XM_032887980 XP_032743871 methylthioribose-1-phosphate isomerase protein-coding 625967500 LOC116897437 U1 spliceosomal RNA 3 63679845 63680010 + 116897437 MODEL JAAIVD010000012;XR_004387476 snrna 625967503 Ttc23l tetratricopeptide repeat domain 23 like 3 170168027 170231457 + 22301074 116896001 MODEL JAAIVD010000012;XM_032897026 XP_032752917 tetratricopeptide repeat protein 23-like protein-coding 625967518 LOC116889743 60S ribosomal protein L17-like 116889743 MODEL JAAIVD010000075 pseudo 625967519 Dppa3 developmental pluripotency associated 3 ENCODES a protein that exhibits histone H3K9me2/3 reader activity (ortholog); INVOLVED IN embryonic cleavage (ortholog); epigenetic programing of female pronucleus (ortholog); ASSOCIATED WITH Germ Cell and Embryonal Neoplasms (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); female pronucleus (ortholog) 6 24470567 24473996 - 30032202 116904601 MODEL JAAIVD010000024;XM_032907398 XP_032763289 developmental pluripotency-associated protein 3 protein-coding 625967527 LOC116902645 U2 spliceosomal RNA 5 20399978 20400152 + 116902645 MODEL JAAIVD010000023 pseudo 625967528 C11H22orf31 chromosome 11 C22orf31 homolog 11 74227081 74241112 + 116912023 MODEL JAAIVD010000006;XM_032915910 XP_032771801 uncharacterized protein C22orf31 homolog protein-coding 625967534 Znf106 zinc finger protein 106 ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog) 5 98644274 98694852 - 30032202 116901838 MODEL JAAIVD010000023;XM_032904014 XP_032759905 protein-coding 625967560 LOC116910030 40S ribosomal protein S19 9 9401927 9402428 - 22301074;30032202 116910030 MODEL JAAIVD010000002;XM_032913815;XM_032913816 XP_032769706;XP_032769707 protein-coding 625967568 Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 ENCODES a protein that exhibits chromatin binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN granulocyte differentiation (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 17 42257486 42326500 - 22301074;30032202 116886155 MODEL JAAIVD010000011;XM_032887518;XM_032887520;XM_032887521;XM_032887522 XP_032743409;XP_032743411;XP_032743412;XP_032743413 protein CBFA2T3 protein-coding 625967593 Tmem87a transmembrane protein 87A ENCODES a protein that exhibits mechanosensitive potassium channel activity (ortholog); voltage-gated monoatomic anion channel activity (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); detection of mechanical stimulus involved in sensory perception of touch (ortholog); intracellular pH reduction (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi cisterna membrane (ortholog); Golgi membrane (ortholog) 5 98491947 98536972 - 30032202 116901833 MODEL JAAIVD010000023;XM_032903999;XM_032904001;XM_032904002;XM_032904003;XM_032904004 XP_032759890;XP_032759892;XP_032759893;XP_032759894;XP_032759895 protein-coding 625967625 LOC116910000 uncharacterized LOC116910000 9 14433451 14444135 + 116910000 MODEL JAAIVD010000002;XR_004389121 ncrna 625967629 Suv39h1 SUV39H1 histone lysine methyltransferase ENCODES a protein that exhibits histone H3K14ub reader activity (ortholog); histone H3K9 methyltransferase activity (ortholog); histone H3K9 trimethyltransferase activity (ortholog); INVOLVED IN blastocyst hatching (ortholog); cellular response to glucose starvation (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN histone modification pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH Chromosome Breakage (ortholog); Ependymomas (ortholog); Myocardial Reperfusion Injury (ortholog); FOUND IN chromatin (ortholog); chromatin silencing complex (ortholog); heterochromatin (ortholog) X 15465315 15478406 - 22301074;30032202 116888696 MODEL JAAIVD010000014;XM_032889986 XP_032745877 histone-lysine N-methyltransferase SUV39H1;suppressor of variegation 3-9 homolog 1 protein-coding 625967639 Vps26c VPS26 endosomal protein sorting factor C INVOLVED IN endocytic recycling (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN protein-containing complex (ortholog) 4 50120263 50147850 + 22301074;30032202 116898962 MODEL JAAIVD010000003;XM_032900383;XM_032900384 XP_032756274;XP_032756275 vacuolar protein sorting-associated protein 26C protein-coding 625967652 LOC116889369 protein LSM12 homolog X 89349350 89349941 + 116889369 MODEL JAAIVD010000014 pseudo 625967653 Gli3 GLI family zinc finger 3 ENCODES a protein that exhibits beta-catenin binding (ortholog); chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); anterior semicircular canal development (ortholog); anterior/posterior pattern specification (ortholog); PARTICIPATES IN altered Hedgehog signaling pathway; Hedgehog signaling pathway; pancreatic cancer pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); anodontia (ortholog); Anorectal Malformations (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); cytoplasm (ortholog) 14 33949662 34039568 - 30032202 116883175 MODEL JAAIVD010000009;XM_032884213 XP_032740104 transcriptional activator GLI3 protein-coding 625967667 Them6 thioesterase superfamily member 6 1 247463993 247467278 + 116912523 MODEL JAAIVD010000025;XM_032916617 XP_032772508 protein THEM6 protein-coding 625967673 Arhgap10 Rho GTPase activating protein 10 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN cytoskeleton organization (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Epidermolysis Bullosa Simplex 5D with Nail Dystrophy (ortholog); FOUND IN cytosol (ortholog); endosome membrane (ortholog) 17 24473531 24726381 - 22301074;30032202 116886148 MODEL JAAIVD010000011;XM_032887503;XM_032887504;XM_032887505;XM_032887506 XP_032743394;XP_032743395;XP_032743396;XP_032743397 rho GTPase-activating protein 10 protein-coding 625967708 LOC116907441 olfactory receptor 143-like 8 32109372 32110335 + 22301074;30032202 116907441 MODEL JAAIVD010000027;XM_032910412 XP_032766303 protein-coding 625967711 Cpd carboxypeptidase D ENCODES a protein that exhibits protein phosphatase 2A binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cellular response to interleukin-2 (ortholog); FOUND IN nucleus (ortholog); perinuclear region of cytoplasm (ortholog); trans-Golgi network (ortholog) 9 95469464 95534631 - 22301074 116910422 MODEL JAAIVD010000002;XM_032914267 XP_032770158 protein-coding 625967736 C17H16orf87 chromosome 17 C16orf87 homolog 17 14327389 14354819 + 116886311 MODEL JAAIVD010000011;XM_032887753 XP_032743644 UPF0547 protein C16orf87 homolog protein-coding 625967744 LOC116907391 urinary protein 3-like 8 54125754 54127276 - 30032202 116907391 MODEL JAAIVD010000027;XM_032910344 XP_032766235 protein-coding 625967749 Capn7 calpain 7 ENCODES a protein that exhibits endopeptidase activity (ortholog); MIT domain binding (ortholog); INVOLVED IN positive regulation of epithelial cell migration (ortholog); proteolysis (ortholog); self proteolysis (ortholog) 13 7056040 7090909 + 22301074 116914419 MODEL JAAIVD010000008;XM_032918686;XM_032918687;XM_032918688 XP_032774577;XP_032774578;XP_032774579 calpain-7 protein-coding 625967780 Inpp5k inositol polyphosphate-5-phosphatase K ENCODES a protein that exhibits inositol bisphosphate phosphatase activity (ortholog); inositol trisphosphate phosphatase activity (ortholog); phosphatidylinositol phosphate 5-phosphatase activity (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to epidermal growth factor stimulus (ortholog); cellular response to hormone stimulus (ortholog); ASSOCIATED WITH congenital muscular dystrophy with cataracts and intellectual disability (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 9 94343393 94363014 + 22301074;30032202 116910172 MODEL JAAIVD010000002;XM_032914029;XM_032914031;XM_032914032 XP_032769920;XP_032769922;XP_032769923 inositol polyphosphate 5-phosphatase K protein-coding 625967802 LOC116888656 gamma-aminobutyric acid receptor-associated protein-like 2 X 1277891 1278623 - 30032202 116888656 MODEL JAAIVD010000014;XM_032889950 XP_032745841 protein-coding 625967807 LOC116895749 endogenous retrovirus group K member 7 Pro protein-like 3 35845450 35845998 + 22301074 116895749 MODEL JAAIVD010000012;XM_032896918 XP_032752809 protein-coding 625967810 Npffr2 neuropeptide FF receptor 2 ENCODES a protein that exhibits neuropeptide receptor activity (ortholog); INVOLVED IN neuropeptide signaling pathway (ortholog); FOUND IN plasma membrane (ortholog) 11 3015450 3024072 + 22301074;30032202 116912859 MODEL JAAIVD010000006;XM_032917072 XP_032772963 protein-coding 625967815 Alkbh3 alkB homolog 3, alpha-ketoglutarate dependent dioxygenase ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); broad specificity oxidative DNA demethylase activity (ortholog); cytosine C-5 DNA demethylase activity (ortholog); INVOLVED IN cell population proliferation (ortholog); DNA alkylation repair (ortholog); negative regulation of cytoplasmic translation (ortholog); FOUND IN nucleoplasm (ortholog) 5 68142437 68171325 - 30032202 116901657 MODEL JAAIVD010000023;XM_032903767;XM_032903768 XP_032759658;XP_032759659 alkB homolog 3, alpha-ketoglutaratedependent dioxygenase;alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 protein-coding 625967833 Rab2a RAB2A, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN autophagosome-lysosome fusion (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); Golgi organization (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN autophagosome membrane (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) 1 134915485 134979612 - 22301074;30032202 116903534 MODEL JAAIVD010000025;XM_032906149 XP_032762040 ras-related protein Rab-2A protein-coding 625967845 Hpgd 15-hydroxyprostaglandin dehydrogenase ENCODES a protein that exhibits 15-hydroxyprostaglandin dehydrogenase (NAD+) activity (ortholog); identical protein binding (ortholog); NAD binding (ortholog); INVOLVED IN ductus arteriosus closure (ortholog); female pregnancy (ortholog); kidney development (ortholog); ASSOCIATED WITH carcinoma (ortholog); colon carcinoma (ortholog); Fever (ortholog); FOUND IN basolateral plasma membrane (ortholog); cytosol (ortholog); extracellular region (ortholog) 13 32775011 32806372 + 30032202 116914399 MODEL JAAIVD010000008;XM_032918627 XP_032774518 15-hydroxyprostaglandin dehydrogenase [NAD(+)] protein-coding 625967856 LOC116884091 small nucleolar RNA SNORA17 14 25554869 25554995 + 116884091 MODEL JAAIVD010000009;XR_004385830 snorna 625967859 Cngb3 cyclic nucleotide gated channel subunit beta 3 ENCODES a protein that exhibits cGMP binding (ortholog); intracellularly cAMP-activated cation channel activity (ortholog); intracellularly cGMP-activated cation channel activity (ortholog); INVOLVED IN monoatomic cation transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; visual phototransduction pathway; ASSOCIATED WITH achromatopsia (ortholog); Achromatopsia 1 (ortholog); achromatopsia 3 (ortholog); FOUND IN photoreceptor outer segment (ortholog); plasma membrane (ortholog); transmembrane transporter complex (ortholog) 1 124208020 124399217 - 30032202 116889215 MODEL JAAIVD010000025;XM_032890369 XP_032746260 cyclic nucleotide-gated cation channel beta-3 protein-coding 625967880 LOC116887339 60S ribosomal protein L39-like 18 26853169 26853516 + 22301074;30032202 116887339 MODEL JAAIVD010000013;XM_032888932 XP_032744823 protein-coding 625967885 Syf2 SYF2 pre-mRNA splicing factor INVOLVED IN embryonic organ development (ortholog); gastrulation (ortholog); in utero embryonic development (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH encephalitis (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) 1 23305210 23313330 - 30032202 116894583 MODEL JAAIVD010000025;XM_032896305 XP_032752196 pre-mRNA-splicing factor SYF2 protein-coding 625967896 LOC116900581 transcription initiation factor IIA subunit 2-like 1 70195839 70196304 - 116900581 MODEL JAAIVD010000025 pseudo 625967897 LOC116885156 small nuclear ribonucleoprotein Sm D1-like 16 16473856 16474217 + 116885156 MODEL JAAIVD010000004 pseudo 625967898 Nrxn2 neurexin 2 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); cell adhesion molecule binding (ortholog); neuroligin family protein binding (ortholog); INVOLVED IN adult behavior (ortholog); chemical synaptic transmission (ortholog); gephyrin clustering involved in postsynaptic density assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); developmental and epileptic encephalopathy 1 (ortholog); epilepsy (ortholog); FOUND IN glutamatergic synapse (ortholog); protein-containing complex (ortholog) 2 1149183 1264330 - 116890655 MODEL JAAIVD010000001;XM_032891021;XM_032891022;XM_032891023;XM_032891024;XM_032891025;XM_032891026;XM_032891027;XM_032891028;XM_032891030;XM_032891031;XM_032891032;XM_032891033;XM_032891034;XM_032891035;XM_032891036;XM_032891037 XP_032746912;XP_032746913;XP_032746914;XP_032746915;XP_032746916;XP_032746917;XP_032746918;XP_032746919;XP_032746921;XP_032746922;XP_032746923;XP_032746924;XP_032746925;XP_032746926;XP_032746927;XP_032746928 neurexin-2-beta protein-coding 625967946 LOC116906588 small nuclear ribonucleoprotein Sm D2-like 8 53579744 53580221 - 22301074;30032202 116906588 MODEL JAAIVD010000027;XM_032909327 XP_032765218 protein-coding 625967951 Gtf2h3 general transcription factor IIH subunit 3 ENCODES a protein that exhibits RNA polymerase II general transcription initiation factor activity (ortholog); INVOLVED IN transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN core TFIIH complex portion of holo TFIIH complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 16 29279446 29294866 - 22301074;30032202 116885942 MODEL JAAIVD010000004;XM_032887261 XP_032743152 protein-coding 625967968 Pkn2 protein kinase N2 ENCODES a protein that exhibits histone deacetylase binding (ortholog); kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN apical junction assembly (ortholog); epithelial cell migration (ortholog); positive regulation of cytokinesis (ortholog); FOUND IN apical junction complex (ortholog); cleavage furrow (ortholog); cytoplasm (ortholog) 3 17847346 17947076 + 22301074 116896191 MODEL JAAIVD010000012;XM_032897238;XM_032897239 XP_032753129;XP_032753130 serine/threonine-protein kinase N2 protein-coding 625967996 LOC116894073 olfactory receptor 51A4-like 2 103002729 103003622 - 22301074 116894073 MODEL JAAIVD010000001;XM_032895796 XP_032751687 protein-coding 625967999 Chchd6 coiled-coil-helix-coiled-coil-helix domain containing 6 INVOLVED IN cristae formation (ortholog); DNA damage response (ortholog); PARTICIPATES IN mitochondrial protein import pathway; FOUND IN MICOS complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 6 56774905 56992380 + 22301074;30032202 116903513 MODEL JAAIVD010000024;XM_032906118 XP_032762009 MICOS complex subunit MIC25 protein-coding 625968011 Mrps15 mitochondrial ribosomal protein S15 FOUND IN mitochondrial matrix (ortholog); mitochondrial ribosome (ortholog); mitochondrial small ribosomal subunit (ortholog) 1 32242495 32252719 - 22301074 116896751 MODEL JAAIVD010000025;XM_032898197 XP_032754088 28S ribosomal protein S15, mitochondrial protein-coding 625968023 LOC116900652 mRNA turnover protein 4 homolog 5 115174386 115176365 + 116900652 MODEL JAAIVD010000023 pseudo 625968024 Septin6 septin 6 INVOLVED IN cytoskeleton organization (ortholog); FOUND IN axon terminus (ortholog); cleavage furrow (ortholog); presynapse (ortholog) X 103094245 103170223 - 22301074;30032202 116888234 MODEL JAAIVD010000014;XM_032889520;XM_032889521;XM_032889522;XM_032889523;XM_032889524;XM_032889525 XP_032745411;XP_032745412;XP_032745413;XP_032745414;XP_032745415;XP_032745416 septin-6 protein-coding 625968059 Sgpp2 sphingosine-1-phosphate phosphatase 2 ENCODES a protein that exhibits sphingosine-1-phosphate phosphatase activity (ortholog); INVOLVED IN regulation of type B pancreatic cell proliferation (ortholog); sphingosine metabolic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; FOUND IN endoplasmic reticulum (ortholog) 4 151567144 151627575 + 30032202 116899543 MODEL JAAIVD010000003;XM_032901434 XP_032757325 protein-coding 625968067 LOC116896062 protein crumbs homolog 1-like 3 205371439 205372477 - 116896062 MODEL JAAIVD010000012 pseudo 625968068 LOC116904787 small nucleolar RNA U13 6 61231294 61231398 - 116904787 MODEL JAAIVD010000024;XR_004388451 snorna 625968071 Dipk1b divergent protein kinase domain 1B 5 10449929 10457739 - 116901263 MODEL JAAIVD010000023;XM_032903018;XM_032903019 XP_032758909;XP_032758910 protein-coding 625968084 LOC116910855 cyclin-dependent kinases regulatory subunit 1-like 10 88391491 88391728 - 116910855 MODEL JAAIVD010000005 pseudo 625968085 LOC116890140 prostaglandin G/H synthase 2-like 1 25355340 25356838 - 116890140 MODEL JAAIVD010000025 pseudo 625968086 Dmac1 distal membrane arm assembly component 1 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 1 78243921 78246524 + 116901059 MODEL JAAIVD010000025;XM_032902636 XP_032758527 distal membrane arm assembly complex 1;distal membrane-arm assembly complex protein 1 protein-coding 625968092 Tet3 tet methylcytosine dioxygenase 3 ENCODES a protein that exhibits DNA 5-methylcytosine dioxygenase activity (ortholog); methyl-CpG binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN epigenetic programing of male pronucleus (ortholog); positive regulation of gene expression via chromosomal CpG island demethylation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN DNA modification pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Beck-Fahrner Syndrome (ortholog); Developmental Disease (ortholog); FOUND IN cytoplasm (ortholog); female pronucleus (ortholog); male pronucleus (ortholog) 6 62766910 62859977 + 22301074;30032202 116903608 MODEL JAAIVD010000024;XM_032906253 XP_032762144 methylcytosine dioxygenase TET3 protein-coding 625968108 Parp12 poly(ADP-ribose) polymerase family member 12 ENCODES a protein that exhibits NAD+-protein mono-ADP-ribosyltransferase activity (ortholog); INVOLVED IN protein auto-ADP-ribosylation (ortholog); transepithelial transport (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; ASSOCIATED WITH Human Influenza (ortholog); macular degeneration (ortholog); FOUND IN trans-Golgi network (ortholog) 6 100665830 100712599 + 22301074 116903937 MODEL JAAIVD010000024;XM_032906714 XP_032762605 protein mono-ADP-ribosyltransferase PARP12 protein-coding 625968124 Prdx6 peroxiredoxin 6 ENCODES a protein that exhibits 1-acylglycerophosphocholine O-acyltransferase activity (ortholog); A2-type glycerophospholipase activity (ortholog); glutathione peroxidase activity (ortholog); INVOLVED IN bleb assembly (ortholog); cellular oxidant detoxification (ortholog); glycerophospholipid catabolic process (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); arteriosclerosis (ortholog); contact dermatitis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 10 40540073 40551238 - 22301074;30032202 116911094 MODEL JAAIVD010000005;XM_032914925 XP_032770816 peroxiredoxin-6 protein-coding 625968133 LOC116907307 olfactory receptor 7G2-like 8 75785865 75786803 - 22301074;30032202 116907307 MODEL JAAIVD010000027;XM_032910252 XP_032766143 protein-coding 625968136 Mcm7 minichromosome maintenance complex component 7 ENCODES a protein that exhibits DNA helicase activity (ortholog); single-stranded DNA binding (ortholog); INVOLVED IN cell population proliferation (ortholog); cellular response to epidermal growth factor stimulus (ortholog); cellular response to xenobiotic stimulus (ortholog); ASSOCIATED WITH astigmatism (ortholog); hepatocellular carcinoma (ortholog); hyperthyroidism (ortholog); FOUND IN MCM complex (ortholog); nucleolus (ortholog); nucleus (ortholog) 16 15536829 15544601 - 22301074;30032202 116885190 MODEL JAAIVD010000004;XM_032886407;XM_032886408;XM_032886409 XP_032742298;XP_032742299;XP_032742300 DNA replication licensing factor MCM7 protein-coding 625968160 Magee2 MAGE family member E2 INVOLVED IN brain development (ortholog); brain morphogenesis (ortholog) X 15274018 15276119 + 30032202 116889225 MODEL JAAIVD010000014;XM_032890377 XP_032746268 melanoma-associated antigen E2 protein-coding 625968165 Frmd3 FERM domain containing 3 ASSOCIATED WITH Chloracne (ortholog); triple-receptor negative breast cancer (ortholog) 1 79241888 79437050 - 22301074 116895594 MODEL JAAIVD010000025;XM_032896836 XP_032752727 FERM domain-containing protein 3 protein-coding 625968183 Med20 mediator complex subunit 20 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN protein ubiquitination (ortholog); skeletal muscle cell differentiation (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; FOUND IN mediator complex (ortholog); nucleus (ortholog); ubiquitin ligase complex (ortholog) 4 82254641 82267067 - 22301074;30032202 116899080 MODEL JAAIVD010000003;XM_032900581 XP_032756472 mediator of RNA polymerase II transcription subunit 20 protein-coding 625968191 LOC116894995 small nucleolar RNA SNORA32 2 3279724 3279805 - 116894995 MODEL JAAIVD010000001 pseudo 625968192 LOC116897900 60S ribosomal protein L9-like 4 33271944 33272518 + 116897900 MODEL JAAIVD010000003 pseudo 625968193 Rcan3 RCAN family member 3 ENCODES a protein that exhibits phosphatase binding (ortholog); troponin I binding (ortholog) 1 22794579 22803944 + 22301074;30032202 116894540 MODEL JAAIVD010000025;XM_032896249;XM_032896256 XP_032752140;XP_032752147 calcipressin-3 protein-coding 625968204 Cdk14 cyclin dependent kinase 14 ENCODES a protein that exhibits cyclin binding (ortholog); cyclin-dependent protein serine/threonine kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN G2/M transition of mitotic cell cycle (ortholog); regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN cyclin-dependent protein kinase holoenzyme complex (ortholog); cytoplasm (ortholog); cytoplasmic cyclin-dependent protein kinase holoenzyme complex (ortholog) 6 137160625 137636402 - 22301074;30032202 116904126 MODEL JAAIVD010000024;XM_032907012;XM_032907013;XM_032907014;XM_032907015 XP_032762903;XP_032762904;XP_032762905;XP_032762906 cyclin-dependent kinase 14 protein-coding 625968234 LOC116912647 ragulator complex protein LAMTOR2-like 11 4934615 4935021 + 116912647 MODEL JAAIVD010000006 pseudo 625968235 Ranbp17 RAN binding protein 17 ASSOCIATED WITH autism spectrum disorder (ortholog); hydrocephalus (ortholog) 9 6039441 6328995 - 22301074;30032202 116910166 MODEL JAAIVD010000002;XM_032914023;XM_032914024;XM_032914025 XP_032769914;XP_032769915;XP_032769916 ran-binding protein 17 protein-coding 625968273 Exosc9 exosome component 9 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); RNA exonuclease activity (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN mRNA catabolic process (ortholog); nuclear mRNA surveillance (ortholog); nuclear polyadenylation-dependent rRNA catabolic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); pontocerebellar hypoplasia (ortholog); pontocerebellar hypoplasia type 1B (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); exosome (RNase complex) (ortholog) 3 117421555 117432875 - 30032202 116896927 MODEL JAAIVD010000012;XM_032898496 XP_032754387 exosome complex component RRP45 protein-coding 625968289 LOC116908864 uncharacterized LOC116908864 9 63698233 63718058 + 116908864 MODEL JAAIVD010000002;XR_004389034 ncrna 625968294 Sidt2 SID1 transmembrane family member 2 ENCODES a protein that exhibits AP-1 adaptor complex binding (ortholog); AP-2 adaptor complex binding (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN cell morphogenesis (ortholog); glucose homeostasis (ortholog); regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); ASSOCIATED WITH Lung Neoplasms (ortholog); metabolic dysfunction-associated steatotic liver disease (ortholog); FOUND IN lysosomal membrane (ortholog); lysosome (ortholog); plasma membrane (ortholog) 8 40457850 40473733 - 22301074;30032202 116906700 MODEL JAAIVD010000027;XM_032909496;XM_032909497;XM_032909498 XP_032765387;XP_032765388;XP_032765389 protein-coding 625968332 LOC116905547 60S ribosomal protein L23-like 7 8063320 8063731 + 116905547 MODEL JAAIVD010000026 pseudo 625968333 LOC116895183 protein dpy-30 homolog 3 170186857 170188252 + 116895183 MODEL JAAIVD010000012 pseudo 625968334 LOC116894310 alcohol sulfotransferase A 2 144021742 144069136 + 22301074;30032202 116894310 MODEL JAAIVD010000001;XM_032896006;XM_032896007 XP_032751897;XP_032751898 protein-coding 625968348 Ebna1bp2 EBNA1 binding protein 2 FOUND IN chromosome (ortholog); nucleolus (ortholog) 1 38403973 38408567 - 30032202 116897748 MODEL JAAIVD010000025;XM_032899185 XP_032755076 probable rRNA-processing protein EBP2 protein-coding 625968361 Prmt6 protein arginine methyltransferase 6 ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); histone H2AR3 methyltransferase activity (ortholog); INVOLVED IN cellular senescence (ortholog); chromatin remodeling (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; homocysteine metabolic pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH cocaine dependence (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 3 48253439 48258495 + 22301074;30032202 116896345 MODEL JAAIVD010000012;XM_032897448;XR_004387333 XP_032753339 protein arginine N-methyltransferase 6 protein-coding 625968369 Wdr55 WD repeat domain 55 INVOLVED IN rRNA processing (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 15 7616838 7620360 - 22301074 116884287 MODEL JAAIVD010000010;XM_032885383 XP_032741274 WD repeat-containing protein 55 protein-coding 625968380 Frrs1 ferric chelate reductase 1 ENCODES a protein that exhibits oxidoreductase activity, acting on metal ions (ortholog); INVOLVED IN intracellular iron ion homeostasis (ortholog); ASSOCIATED WITH COVID-19 (ortholog) 3 42829727 42859580 - 30032202 116896323 MODEL JAAIVD010000012;XM_032897418 XP_032753309 ferric-chelate reductase 1 protein-coding 625968399 LOC116893573 histocompatibility antigen 60b-like 2 222133762 222136030 - 30032202 116893573 MODEL JAAIVD010000001;XM_032895280 XP_032751171 protein-coding 625968405 Paip1 poly(A) binding protein interacting protein 1 ENCODES a protein that exhibits translation activator activity (ortholog); INVOLVED IN CRD-mediated mRNA stabilization (ortholog); negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay (ortholog); positive regulation of cytoplasmic translation (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) 3 177319670 177346441 - 22301074;30032202 116897170 MODEL JAAIVD010000012;XM_032898847;XM_032898848;XM_032898849;XM_032898850 XP_032754738;XP_032754739;XP_032754740;XP_032754741 polyadenylate-binding protein-interacting protein 1 protein-coding 625968429 LOC116888960 serine/threonine-protein kinase WNK3 X 6441799 6542767 + 22301074;30032202 116888960 MODEL JAAIVD010000014;XM_032890188 XP_032746079 protein-coding 625968448 Cplx3 complexin 3 ENCODES a protein that exhibits neurotransmitter transmembrane transporter activity (ortholog); SNARE binding (ortholog); INVOLVED IN insulin secretion (ortholog); regulation of neurotransmitter secretion (ortholog); regulation of synaptic vesicle fusion to presynaptic active zone membrane (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); photoreceptor ribbon synapse (ortholog) 8 51491333 51496380 - 22301074;30032202 116908088 MODEL JAAIVD010000027;XM_032911370 XP_032767261 complexin-3 protein-coding 625968455 Sfxn3 sideroflexin 3 ENCODES a protein that exhibits L-serine transmembrane transporter activity (ortholog); INVOLVED IN mitochondrial transmembrane transport (ortholog); one-carbon metabolic process (ortholog); serine import into mitochondrion (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) 2 44553168 44561618 + 22301074;30032202 116891219 MODEL JAAIVD010000001;XM_032892056;XM_032892057;XM_032892058;XM_032892059 XP_032747947;XP_032747948;XP_032747949;XP_032747950 sideroflexin-3 protein-coding 625968479 Prcd photoreceptor disc component ENCODES a protein that exhibits opsin binding (ortholog); INVOLVED IN detection of light stimulus involved in visual perception (ortholog); microglial cell migration (ortholog); neural retina development (ortholog); ASSOCIATED WITH retinitis pigmentosa 36 (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); extracellular region (ortholog) 9 67413976 67417255 - 22301074;30032202 116909468 MODEL JAAIVD010000002;XM_032913056 XP_032768947 photoreceptor disk component PRCD protein-coding 625968485 LOC116906461 small nucleolar RNA SNORA17 7 72871195 72871323 + 116906461 MODEL JAAIVD010000026;XR_004388716 snorna 625968488 LOC116883505 serpin B9-like 14 52147438 52154829 - 22301074;30032202 116883505 MODEL JAAIVD010000009;XM_032884673 XP_032740564 protein-coding 625968496 LOC116891034 keratin-associated protein 5-10-like 2 7329718 7340542 + 116891034 MODEL JAAIVD010000001;XM_032891717 XP_032747608 protein-coding 625968502 LOC116915174 U6 spliceosomal RNA 13 23559760 23559862 + 116915174 MODEL JAAIVD010000008;XR_004389834 snrna 625968505 LOC116890267 40S ribosomal protein S19-like 1 263814394 263816238 - 22301074;30032202 116890267 MODEL JAAIVD010000025;XM_032890988 XP_032746879 protein-coding 625968509 LOC116897593 small nucleolar RNA SNORA17 3 34168900 34169025 + 116897593 MODEL JAAIVD010000012;XR_004387595 snorna 625968512 Elovl4 ELOVL fatty acid elongase 4 ENCODES a protein that exhibits fatty acid elongase activity (ortholog); INVOLVED IN circadian rhythm (ortholog); fatty acid elongation, polyunsaturated fatty acid (ortholog); fatty acid elongation, saturated fatty acid (ortholog); PARTICIPATES IN alpha-linolenic acid metabolic pathway; linoleic acid metabolic pathway; ASSOCIATED WITH corneal dystrophy (ortholog); diabetic retinopathy (ortholog); fundus dystrophy (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 8 77914261 77942495 - 22301074;30032202 116906955 MODEL JAAIVD010000027;XM_032909876 XP_032765767 elongation of very long chain fatty acids protein 4 protein-coding 625968522 Cdc42se2 CDC42 small effector 2 ENCODES a protein that exhibits signaling adaptor activity (ortholog); INVOLVED IN regulation of signal transduction (ortholog); FOUND IN plasma membrane (ortholog) 9 37149726 37218699 - 30032202 116908558 MODEL JAAIVD010000002;XM_032911763 XP_032767654 CDC42 small effector protein 2 protein-coding 625968532 Znf652 zinc finger protein 652 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); FOUND IN nucleus (ortholog) 9 58634082 58683196 - 30032202 116908761 MODEL JAAIVD010000002;XM_032912112;XM_032912113 XP_032768003;XP_032768004 protein-coding 625968547 LOC116897479 small nucleolar RNA SNORD73 3 67419073 67419146 + 116897479 MODEL JAAIVD010000012;XR_004387503 snorna 625968550 LOC116887852 dystrophin-like X 42450278 42514383 + 22301074;30032202 116887852 MODEL JAAIVD010000014;XM_032889356 XP_032745247 protein-coding 625968563 LOC116883317 hippocampus abundant transcript-like protein 1 14 74536987 74591537 + 22301074 116883317 MODEL JAAIVD010000009;XM_032884373 XP_032740264 protein-coding 625968579 Penk proenkephalin ENCODES a protein that exhibits opioid peptide activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN aggressive behavior (ortholog); behavioral fear response (ortholog); behavioral response to ethanol (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); Anhedonia (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cell body fiber (ortholog) 1 138560687 138565893 + 22301074;30032202 116903650 MODEL JAAIVD010000025;XM_032906310 XP_032762201 proenkephalin-A protein-coding 625968586 LOC116889010 ubiquitin carboxyl-terminal hydrolase 27-like X 14742635 14745841 + 22301074 116889010 MODEL JAAIVD010000014;XM_032890219 XP_032746110 protein-coding 625968590 Gucy1a2 guanylate cyclase 1 soluble subunit alpha 2 ENCODES a protein that exhibits guanylate cyclase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN positive regulation of nitric oxide mediated signal transduction (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cytosol (ortholog); guanylate cyclase complex, soluble (ortholog) 8 207477 291309 - 22301074;30032202 116906690 MODEL JAAIVD010000027;XM_032909481 XP_032765372 guanylate cyclase soluble subunit alpha-2 protein-coding 625968598 Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A ENCODES a protein that exhibits actin binding (ortholog); cyclin binding (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN calcineurin-NFAT signaling cascade (ortholog); cardiac muscle hypertrophy (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal dominant intellectual developmental disorder 7 (ortholog); Cardiomegaly (ortholog); FOUND IN actin filament (ortholog); axon (ortholog); cytoplasm (ortholog) 4 49950807 50070077 - 22301074;30032202 116898960 MODEL JAAIVD010000003;XM_032900378;XM_032900379;XM_032900380;XM_032900381;XM_032900382 XP_032756269;XP_032756270;XP_032756271;XP_032756272;XP_032756273 dual specificity tyrosine-phosphorylation-regulated kinase 1A protein-coding 625968628 Pnrc1 proline rich nuclear receptor coactivator 1 ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog) 1 109784828 109788439 + 30032202 116902307 MODEL JAAIVD010000025;XM_032904755 XP_032760646 proline-rich nuclear receptor coactivator 1 protein-coding 625968634 LOC116887635 histone-lysine N-methyltransferase KMT5C-like 18 11132133 11137178 - 116887635 MODEL JAAIVD010000013 pseudo 625968635 Tyro3 TYRO3 protein tyrosine kinase ENCODES a protein that exhibits phosphatidylinositol 3-kinase binding (ortholog); protein tyrosine kinase activity (ortholog); virus receptor activity (ortholog); INVOLVED IN apoptotic cell clearance (ortholog); forebrain cell migration (ortholog); natural killer cell differentiation (ortholog); ASSOCIATED WITH 46, XX Disorders of Sex Development (ortholog); hereditary breast ovarian cancer syndrome (ortholog); thrombosis (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum membrane (ortholog); nuclear envelope (ortholog) 5 97963025 97982136 + 22301074;30032202 116901822 MODEL JAAIVD010000023;XM_032903980;XM_032903981 XP_032759871;XP_032759872 tyrosine-protein kinase receptor TYRO3 protein-coding 625968662 LOC116887726 small nucleolar RNA SNORA17 18 45944808 45944939 - 116887726 MODEL JAAIVD010000013;XR_004386240 snorna 625968665 LOC116886577 DNA-directed RNA polymerases I, II, and III subunit RPABC5-like 17 5203411 5203614 + 22301074;30032202 116886577 MODEL JAAIVD010000011;XM_032888106 XP_032743997 protein-coding 625968668 Rest RE1 silencing transcription factor ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN auditory receptor cell stereocilium organization (ortholog); cardiac muscle cell myoblast differentiation (ortholog); cellular response to electrical stimulus (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); autosomal dominant nonsyndromic deafness (ortholog); autosomal dominant nonsyndromic deafness 27 (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 11 34025892 34046092 + 30032202 116912405 MODEL JAAIVD010000006;XM_032916464;XM_032916465 XP_032772355;XP_032772356 RE1-silencing transcription factor protein-coding 625968679 LOC116895858 60 kDa heat shock protein, mitochondrial-like 3 93100468 93102549 + 116895858 MODEL JAAIVD010000012 pseudo 625968680 LOC116912758 E3 ubiquitin-protein ligase Hakai-like 11 64387395 64388842 - 116912758 MODEL JAAIVD010000006 pseudo 625968681 LOC116895245 olfactory receptor 146 3 24731 25666 + 22301074;30032202 116895245 MODEL JAAIVD010000012;XM_032896565 XP_032752456 protein-coding 625968684 Anks4b ankyrin repeat and sterile alpha motif domain containing 4B INVOLVED IN brush border assembly (ortholog); protein localization to microvillus (ortholog); protein-containing complex assembly (ortholog); FOUND IN brush border (ortholog); endoplasmic reticulum membrane (ortholog); microvillus (ortholog) 2 81511846 81521523 - 22301074 116891585 MODEL JAAIVD010000001;XM_032892765 XP_032748656 ankyrin repeat and SAM domain-containing protein 4B protein-coding 625968690 LOC116910864 39S ribosomal protein L30, mitochondrial-like 10 5504334 5504810 - 116910864 MODEL JAAIVD010000005 pseudo 625968691 Slc9c1 solute carrier family 9 member C1 INVOLVED IN flagellated sperm motility (ortholog); FOUND IN motile cilium (ortholog) 4 30264493 30335827 + 22301074;30032202 116897888 MODEL JAAIVD010000003;XM_032899293 XP_032755184 sodium/hydrogen exchanger 10 protein-coding 625968723 Irf6 interferon regulatory factor 6 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cell development (ortholog); cranial skeletal system development (ortholog); keratinocyte differentiation (ortholog); ASSOCIATED WITH cleft lip (ortholog); cleft palate (ortholog); Congenital Limb Deformities (ortholog); FOUND IN apical part of cell (ortholog); cytoplasm (ortholog); cytosol (ortholog) 10 71134459 71154231 + 22301074;30032202 116911319 MODEL JAAIVD010000005;XM_032915233 XP_032771124 protein-coding 625968735 LOC116913488 olfactory receptor 1537-like 12 107593 108752 - 22301074;30032202 116913488 MODEL JAAIVD010000007;XM_032917688 XP_032773579 protein-coding 625968739 LOC116901499 ubiquitin-like protein FUBI 5 48116362 48116806 + 116901499 MODEL JAAIVD010000023 pseudo 625968740 LOC116894119 olfactory receptor 52N4-like 2 103768278 103769186 + 22301074 116894119 MODEL JAAIVD010000001;XM_032895837 XP_032751728 protein-coding 625968743 LOC116910301 40S ribosomal protein S4, X isoform-like 9 48534335 48535134 + 116910301 MODEL JAAIVD010000002 pseudo 625968744 LOC116889631 glyceraldehyde-3-phosphate dehydrogenase-like 1 142626933 142627971 - 116889631 MODEL JAAIVD010000025 pseudo 625968745 LOC116904591 histone RNA hairpin-binding protein-like 6 24016643 24017573 + 116904591 MODEL JAAIVD010000024 pseudo 625968746 Mcemp1 mast cell expressed membrane protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN inflammatory response (ortholog); Kit signaling pathway (ortholog); mast cell proliferation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog); protein-containing complex (ortholog) 16 1584287 1591387 + 116885794 MODEL JAAIVD010000004;XM_032887126 XP_032743017 mast cell-expressed membrane protein 1 protein-coding 625968758 Tfr2 transferrin receptor 2 ENCODES a protein that exhibits co-receptor binding (ortholog); transferrin receptor activity (ortholog); INVOLVED IN acute-phase response (ortholog); cellular response to iron ion (ortholog); endocytic iron import into cell (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); beta thalassemia (ortholog); genetic disease (ortholog); FOUND IN cytoplasmic vesicle (ortholog); external side of plasma membrane (ortholog); HFE-transferrin receptor complex (ortholog) 16 16434188 16450540 - 22301074;30032202 116885534 MODEL JAAIVD010000004;XM_032886832 XP_032742723 transferrin receptor protein 2 protein-coding 625968780 Rsph1 radial spoke head component 1 INVOLVED IN axoneme assembly (ortholog); spermatid development (ortholog); ASSOCIATED WITH bronchiectasis (ortholog); Ciliary Motility Disorders (ortholog); colorectal adenocarcinoma (ortholog); FOUND IN 9+2 motile cilium (ortholog); axoneme (ortholog); condensed nuclear chromosome (ortholog) 18 2601164 2621645 + 30032202 116887569 MODEL JAAIVD010000013;XM_032889189 XP_032745080 radial spoke head 1 homolog protein-coding 625968792 LOC116894250 olfactory receptor 14C36-like 2 114888608 114889603 + 22301074;30032202 116894250 MODEL JAAIVD010000001;XM_032895956 XP_032751847 protein-coding 625968795 Enpp4 ectonucleotide pyrophosphatase/phosphodiesterase 4 ENCODES a protein that exhibits bis(5'-adenosyl)-triphosphatase activity (ortholog); INVOLVED IN positive regulation of blood coagulation (ortholog); purine ribonucleoside catabolic process (ortholog) 4 85761966 85768329 + 116899143 MODEL JAAIVD010000003;XM_032900684 XP_032756575 bis(5'-adenosyl)-triphosphatase ENPP4 protein-coding 625968802 Zdhhc16 zDHHC palmitoyltransferase 16 ENCODES a protein that exhibits palmitoyltransferase activity (ortholog); INVOLVED IN DNA damage response (ortholog); eye development (ortholog); heart development (ortholog); ASSOCIATED WITH intellectual disability (ortholog) 2 41051419 41058218 + 22301074;30032202 116891168 MODEL JAAIVD010000001;XM_032891971;XM_032891972;XM_032891973;XM_032891974;XM_032891975;XM_032891976 XP_032747862;XP_032747863;XP_032747864;XP_032747865;XP_032747866;XP_032747867 palmitoyltransferase ZDHHC16;zinc finger DHHC-type palmitoyltransferase 16 protein-coding 625968833 Ccdc183 coiled-coil domain containing 183 INVOLVED IN centriole assembly (ortholog); cytoplasm organization (ortholog); manchette assembly (ortholog) 5 11561546 11570058 + 116901286 MODEL JAAIVD010000023;XM_032903075 XP_032758966 coiled-coil domain-containing protein 183 protein-coding 625968851 LOC116889895 olfactory receptor 6C2-like 1 159906818 159907753 + 22301074;30032202 116889895 MODEL JAAIVD010000025;XM_032890718 XP_032746609 protein-coding 625968854 LOC116884528 neuropeptide Y receptor type 6-like 15 24072963 24074082 + 116884528 MODEL JAAIVD010000010 pseudo 625968855 LOC116913634 olfactory receptor 1537-like 12 182250 183194 - 22301074;30032202 116913634 MODEL JAAIVD010000007;XM_032917905 XP_032773796 protein-coding 625968858 LOC116901772 alpha-enolase-like 5 95310146 95311398 - 116901772 MODEL JAAIVD010000023 pseudo 625968859 LOC116900249 olfactory receptor 1009 5 63039619 63040563 + 22301074;30032202 116900249 MODEL JAAIVD010000023;XM_032902001 XP_032757892 protein-coding 625968862 Grm7 glutamate metabotropic receptor 7 ENCODES a protein that exhibits adenylate cyclase inhibiting G protein-coupled glutamate receptor activity (ortholog); adenylate cyclase inhibitor activity (ortholog); calcium channel regulator activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adult behavior (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN asymmetric synapse (ortholog); axon (ortholog); axon terminus (ortholog) 6 35016691 35825498 - 22301074;30032202 116903433 MODEL JAAIVD010000024;XM_032905983;XM_032905984;XM_032905985 XP_032761874;XP_032761875;XP_032761876 metabotropic glutamate receptor 7 protein-coding 625968882 Tmem271 transmembrane protein 271 11 18143867 18146248 - 116912198 MODEL JAAIVD010000006;XM_032916132 XP_032772023 protein-coding 625968887 LOC116906076 glyceraldehyde-3-phosphate dehydrogenase-like 7 63606499 63607417 + 116906076 MODEL JAAIVD010000026 pseudo 625968888 LOC116904466 endogenous retrovirus group K member 5 Gag polyprotein-like 6 135846047 135847750 - 22301074 116904466 MODEL JAAIVD010000024;XM_032907278 XP_032763169 protein-coding 625968891 LOC116895018 small nucleolar RNA SNORA48 2 48464498 48464641 + 116895018 MODEL JAAIVD010000001;XR_004387204 snorna 625968894 LOC116894576 NACHT, LRR and PYD domains-containing protein 4C 2 180135542 180172467 - 22301074;30032202 116894576 MODEL JAAIVD010000001;XM_032896295;XM_032896296;XM_032896297 XP_032752186;XP_032752187;XP_032752188 protein-coding 625968916 LOC116886654 GTP-binding protein Rhes-like 17 24785013 24785642 + 116886654 MODEL JAAIVD010000011 pseudo 625968917 Ran RAN, member RAS oncogene family ENCODES a protein that exhibits dynein intermediate chain binding (ortholog); G protein activity (ortholog); GDP binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to mineralocorticoid stimulus (ortholog); GTP metabolic process (ortholog); PARTICIPATES IN CRM1 export pathway; microRNA pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN centriole (ortholog); chromatin (ortholog); cytoplasm (ortholog) 16 24950196 24954475 - 22301074;30032202 116885427 MODEL JAAIVD010000004;XM_032886712;XM_032886713 XP_032742603;XP_032742604 GTP-binding nuclear protein Ran protein-coding 625968932 Scfd2 sec1 family domain containing 2 ASSOCIATED WITH autism spectrum disorder (ortholog) 11 30996644 31301710 - 22301074;30032202 116912911 MODEL JAAIVD010000006;XM_032917168 XP_032773059 sec1 family domain-containing protein 2 protein-coding 625968945 LOC116889538 small nucleolar RNA SNORA26 X 113329174 113329294 - 116889538 MODEL JAAIVD010000014;XR_004386473 snorna 625968948 LOC116887965 60S ribosomal protein L38-like X 66356426 66359307 + 116887965 MODEL JAAIVD010000014 pseudo 625968949 Syngr2 synaptogyrin 2 INVOLVED IN protein targeting (ortholog); regulated exocytosis (ortholog); synaptic vesicle membrane organization (ortholog); FOUND IN membrane (ortholog); mitochondrion (ortholog); nucleus (ortholog) 9 66251528 66256057 - 30032202 116908870 MODEL JAAIVD010000002;XM_032912311;XM_032912312 XP_032768202;XP_032768203 synaptogyrin-2 protein-coding 625968962 LOC116887165 olfactory receptor 10A4-like 18 10646077 10647039 + 22301074 116887165 MODEL JAAIVD010000013;XM_032888715 XP_032744606 protein-coding 625968966 LOC116883553 olfactory receptor 2B2-like 14 41989288 41990229 - 22301074 116883553 MODEL JAAIVD010000009;XM_032884732 XP_032740623 protein-coding 625968969 LOC116914161 small nucleolar RNA U3 12 40642888 40643080 - 116914161 MODEL JAAIVD010000007 pseudo 625968970 LOC116911510 olfactory receptor 6K2-like 10 52859159 52860124 + 22301074 116911510 MODEL JAAIVD010000005;XM_032915498 XP_032771389 protein-coding 625968973 LOC116894441 importin subunit alpha-3-like 2 164640358 164641884 + 116894441 MODEL JAAIVD010000001 pseudo 625968974 LOC116889593 sex-determining region Y protein-like Y 1926850 1927383 - 30032202 116889593 MODEL JAAIVD010000015;XM_032890529 XP_032746420 protein-coding 625968978 Rbm27 RNA binding motif protein 27 15 3451258 3514090 + 22301074;30032202 116884284 MODEL JAAIVD010000010;XM_032885380 XP_032741271 RNA-binding protein 27 protein-coding 625969003 Fastk Fas activated serine/threonine kinase ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN protein phosphorylation (ortholog); regulation of RNA splicing (ortholog); FOUND IN mitochondrion (ortholog); nuclear speck (ortholog) 6 153634556 153638617 - 22301074;30032202 116904206 MODEL JAAIVD010000024;XM_032907127;XM_032907128;XM_032907129;XM_032907130 XP_032763018;XP_032763019;XP_032763020;XP_032763021 fas-activated serine/threonine kinase protein-coding 625969025 Adamts8 ADAM metallopeptidase with thrombospondin type 1 motif 8 ASSOCIATED WITH Moebius syndrome (ortholog); Prostatic Neoplasms (ortholog) 8 26655479 26674944 + 22301074;30032202 116906928 MODEL JAAIVD010000027;XM_032909854 XP_032765745 A disintegrin and metalloproteinase with thrombospondin motifs 8 protein-coding 625969038 Tekt1 tektin 1 INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); microtubule cytoskeleton (ortholog) 9 43154549 43182137 + 22301074;30032202 116908918 MODEL JAAIVD010000002;XM_032912375 XP_032768266 tektin-1 protein-coding 625969050 Nlgn1 neuroligin 1 ENCODES a protein that exhibits cell adhesion mediator activity (ortholog); cell adhesion molecule binding (ortholog); identical protein binding (ortholog); INVOLVED IN AMPA glutamate receptor clustering (ortholog); AMPA selective glutamate receptor signaling pathway (ortholog); calcium-dependent cell-cell adhesion (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); genetic disease (ortholog); FOUND IN cell surface (ortholog); dendrite (ortholog); dendritic shaft (ortholog) 3 128120382 128979051 + 22301074;30032202 116896993 MODEL JAAIVD010000012;XM_032898585;XM_032898587;XM_032898588;XM_032898589;XM_032898590;XM_032898591;XM_032898592;XM_032898593;XM_032898594;XM_032898595;XM_032898596;XM_032898597;XM_032898598;XM_032898599 XP_032754476;XP_032754478;XP_032754479;XP_032754480;XP_032754481;XP_032754482;XP_032754483;XP_032754484;XP_032754485;XP_032754486;XP_032754487;XP_032754488;XP_032754489;XP_032754490 neuroligin-1 protein-coding 625969095 Rit2 Ras like without CAAX 2 ENCODES a protein that exhibits calmodulin binding (ortholog); chromatin binding (ortholog); GTP binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); intracellular signal transduction (ortholog); maintenance of protein location in cell (ortholog); ASSOCIATED WITH acute myocardial infarction (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); dendritic tree (ortholog) 15 12777262 12945848 + 22301074;30032202 116884679 MODEL JAAIVD010000010;XM_032885855 XP_032741746 GTP-binding protein Rit2 protein-coding 625969103 Chp1 calcineurin like EF-hand protein 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); kinase binding (ortholog); INVOLVED IN cytoplasmic microtubule organization (ortholog); intracellular sodium ion homeostasis (ortholog); membrane docking (ortholog); ASSOCIATED WITH Spastic Ataxia 9, Autosomal Recessive (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); Golgi membrane (ortholog) 5 97721837 97758719 + 22301074 116901811 MODEL JAAIVD010000023;XM_032903971 XP_032759862 calcineurin B homologous protein 1 protein-coding 625969114 Spag7 sperm associated antigen 7 FOUND IN nucleoplasm (ortholog) 9 50274823 50280808 - 22301074 116909532 MODEL JAAIVD010000002;XM_032913146 XP_032769037 sperm-associated antigen 7 protein-coding 625969125 LOC116907930 serine protease 44 8 101396707 101401283 + 22301074 116907930 MODEL JAAIVD010000027;XM_032911143;XM_032911144 XP_032767034;XP_032767035 protein-coding 625969138 Thap12 THAP domain containing 12 FOUND IN nucleus (ortholog) 2 96978362 96994074 + 22301074 116891716 MODEL JAAIVD010000001;XM_032893005 XP_032748896 52 kDa repressor of the inhibitor of the protein kinase protein-coding 625969147 LOC116894169 olfactory receptor 226 2 105116462 105117445 - 22301074 116894169 MODEL JAAIVD010000001;XM_032895885 XP_032751776 protein-coding 625969150 LOC116889839 flavodoxin/ferredoxin--NADP reductase-like 22301074;30032202 116889839 MODEL JAAIVD010001799;XM_032890672 XP_032746563 protein-coding 625969151 Cog5 component of oligomeric golgi complex 5 INVOLVED IN Golgi organization (ortholog); inter-Golgi cisterna vesicle-mediated transport (ortholog); retrograde transport, vesicle recycling within Golgi (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation type IIi (ortholog); FOUND IN COG complex (ortholog); Golgi apparatus (ortholog) 7 45027968 45318696 + 30032202 116904959 MODEL JAAIVD010000026;XM_032907620 XP_032763511 conserved oligomeric Golgi complex subunit 5 protein-coding 625969177 Mtx2 metaxin 2 INVOLVED IN mitochondrial transport (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; ASSOCIATED WITH Mandibuloacral Dysplasia Progeroid Syndrome (ortholog); megacolon (ortholog); FOUND IN mitochondrion (ortholog) 5 52169558 52231064 + 22301074;30032202 116901534 MODEL JAAIVD010000023;XM_032903514 XP_032759405 metaxin-2 protein-coding 625969191 Vxn vexin INVOLVED IN neurogenesis (ortholog); neuron differentiation (ortholog); FOUND IN nucleus (ortholog); plasma membrane (ortholog) 1 144341640 144365090 + 30032202 116903824 MODEL JAAIVD010000025;XM_032906539 XP_032762430 protein-coding 625969201 Ecrg4 ECRG4 augurin precursor ENCODES a protein that exhibits neuropeptide hormone activity (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); cellular senescence (ortholog); G1 to G0 transition (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); dense core granule (ortholog) 4 119924188 119936446 + 30032202 116898160 MODEL JAAIVD010000003;XM_032899536 XP_032755427 augurin protein-coding 625969209 LOC116900886 olfactory receptor 4P4-like 5 69973698 69975732 - 22301074 116900886 MODEL JAAIVD010000023;XM_032902562 XP_032758453 protein-coding 625969213 LOC116914317 glyceraldehyde-3-phosphate dehydrogenase-like 13 41566297 41623987 - 116914317 MODEL JAAIVD010000008 pseudo 625969214 LOC116903428 uncharacterized LOC116903428 6 33454139 33460209 + 116903428 MODEL JAAIVD010000024;XR_004388276 ncrna 625969218 Ostf1 osteoclast stimulating factor 1 ENCODES a protein that exhibits SH3 domain binding (ortholog); FOUND IN cytosol (ortholog) 2 18591668 18644307 - 22301074;30032202 116892244 MODEL JAAIVD010000001;XM_032893813 XP_032749704 osteoclast-stimulating factor 1 protein-coding 625969233 LOC116904646 U6 spliceosomal RNA 6 78225031 78225137 - 116904646 MODEL JAAIVD010000024;XR_004388349 snrna 625969236 Cdx2 caudal type homeobox 2 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); blastocyst development (ortholog); blood vessel development (ortholog); ASSOCIATED WITH Adenomatous Polyps (ortholog); Anorectal Malformations (ortholog); Barrett's esophagus (ortholog); FOUND IN condensed nuclear chromosome (ortholog); nucleus (ortholog); protein-containing complex (ortholog) 16 6544393 6550297 + 22301074;30032202 116885451 MODEL JAAIVD010000004;XM_032886735 XP_032742626 homeobox protein CDX-2 protein-coding 625969243 Rfx5 regulatory factor X5 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of MHC class II biosynthetic process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH MHC class II deficiency (ortholog); MHC CLASS II DEFICIENCY 1 (ortholog); MHC CLASS II DEFICIENCY 3 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) 3 62285494 62293238 - 30032202 116896576 MODEL JAAIVD010000012;XM_032897795;XM_032897796;XM_032897797 XP_032753686;XP_032753687;XP_032753688 DNA-binding protein RFX5 protein-coding 625969265 LOC116905952 ALK tyrosine kinase receptor-like 7 21250945 21270294 + 22301074 116905952 MODEL JAAIVD010000026;XM_032908953 XP_032764844 protein-coding 625969272 Gjb5 gap junction protein beta 5 INVOLVED IN epididymis development (ortholog); labyrinthine layer morphogenesis (ortholog); spongiotrophoblast differentiation (ortholog); ASSOCIATED WITH Skin Neoplasms (ortholog) 1 30925601 30926756 + 22301074;30032202 116886948 MODEL JAAIVD010000025;XM_032888450 XP_032744341 gap junction beta-5 protein protein-coding 625969277 LOC116905706 60S ribosomal protein L34-like 7 67641862 67642285 - 22301074;30032202 116905706 MODEL JAAIVD010000026;XM_032908680 XP_032764571 protein-coding 625969282 Vps45 vacuolar protein sorting 45 homolog ASSOCIATED WITH Familial Myelofibrosis (ortholog); genetic disease (ortholog); severe congenital neutropenia (ortholog); FOUND IN endosome membrane (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) 3 61223077 61282758 + 22301074;30032202 116896526 MODEL JAAIVD010000012;XM_032897707 XP_032753598 vacuolar protein sorting-associated protein 45 protein-coding 625969301 LOC116904701 small nucleolar RNA SNORA48 6 29989772 29989915 + 116904701 MODEL JAAIVD010000024;XR_004388396 snorna 625969304 Ltbp2 latent transforming growth factor beta binding protein 2 INVOLVED IN response to alkaloid (ortholog); supramolecular fiber organization (ortholog); ASSOCIATED WITH autosomal dominant isolated ectopia lentis 1 (ortholog); buphthalmos (ortholog); Cardiac Fibrosis (ortholog) 7 98892980 98985364 - 22301074 116905280 MODEL JAAIVD010000026;XM_032908139;XM_032908140;XM_032908142 XP_032764030;XP_032764031;XP_032764033 latent-transforming growth factor beta-binding protein 2 protein-coding 625969348 Sirt7 sirtuin 7 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K18 deacetylase activity, NAD-dependent (ortholog); NAD-dependent protein lysine deacetylase activity (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair-dependent chromatin remodeling (ortholog); homologous chromosome pairing at meiosis (ortholog); PARTICIPATES IN histone modification pathway; RNA polymerase I transcription pathway; Sirtuin mediated pathway; ASSOCIATED WITH Reperfusion Injury (ortholog); steatotic liver disease (ortholog); systemic scleroderma (ortholog); FOUND IN chromatin (ortholog); nuclear speck (ortholog); nucleolus (ortholog) 9 63397893 63404522 + 22301074 116908518 MODEL JAAIVD010000002;XM_032911693;XR_004388991 XP_032767584 NAD-dependent protein deacetylase sirtuin-7 protein-coding 625969366 Ackr1 atypical chemokine receptor 1 (Duffy blood group) ENCODES a protein that exhibits C-C chemokine binding (ortholog); INVOLVED IN inflammatory response (ortholog); regulation of chemokine production (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); Arteriovenous Fistula (ortholog); malaria (ortholog); FOUND IN plasma membrane (ortholog) 10 52364444 52366086 - 30032202 116910865 MODEL JAAIVD010000005;XM_032914626 XP_032770517 atypical chemokine receptor 1 protein-coding 625969372 LOC116904626 olfactory receptor 6C74-like 6 30154207 30155094 - 22301074;30032202 116904626 MODEL JAAIVD010000024;XM_032907417 XP_032763308 protein-coding 625969375 LOC116895551 uncharacterized LOC116895551 3 122328365 122334328 + 116895551 MODEL JAAIVD010000012;XR_004387286 ncrna 625969379 LOC116887492 40S ribosomal protein S2-like 18 9375654 9376460 + 116887492 MODEL JAAIVD010000013 pseudo 625969380 Scgb1a1 secretoglobin family 1A member 1 ENCODES a protein that exhibits polychlorinated biphenyl binding (ortholog); INVOLVED IN negative regulation of interleukin-13 production (ortholog); negative regulation of interleukin-4 production (ortholog); negative regulation of interleukin-5 production (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); allergic rhinitis (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); nuclear envelope (ortholog) 2 8857238 8860667 + 22301074;30032202 116893627 MODEL JAAIVD010000001;XM_032895341 XP_032751232 uteroglobin protein-coding 625969387 Rhbdl2 rhomboid like 2 ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); FOUND IN plasma membrane (ortholog) 1 34462093 34483320 - 22301074;30032202 116896942 MODEL JAAIVD010000025;XM_032898510 XP_032754401 rhomboid-related protein 2 protein-coding 625969398 LOC116884144 small nucleolar RNA snR60/Z15/Z230/Z193/J17 14 14703305 14703384 - 116884144 MODEL JAAIVD010000009;XR_004385861 snorna 625969401 Lgi4 leucine rich repeat LGI family member 4 INVOLVED IN adult locomotory behavior (ortholog); glial cell development (ortholog); glial cell proliferation (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita-1 (ortholog); childhood absence epilepsy (ortholog); fetal akinesia deformation sequence syndrome 1 (ortholog); FOUND IN extracellular region (ortholog) 2 164961661 164972131 - 22301074;30032202 116892290 MODEL JAAIVD010000001;XM_032893891 XP_032749782 leucine-rich repeat LGI family member 4 protein-coding 625969414 LOC116888273 uncharacterized LOC116888273 X 5963893 6038124 - 116888273 MODEL JAAIVD010000014;XR_004386296;XR_004386297;XR_004386298 ncrna 625969425 Rfc3 replication factor C subunit 3 ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); DNA binding (ortholog); DNA clamp loader activity (ortholog); INVOLVED IN DNA replication (ortholog); DNA-templated DNA replication (ortholog); positive regulation of DNA-directed DNA polymerase activity (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; FOUND IN Ctf18 RFC-like complex (ortholog); DNA replication factor C complex (ortholog); nucleoplasm (ortholog) 16 1021495 1032153 + 22301074;30032202 116885706 MODEL JAAIVD010000004;XM_032887011;XM_032887012 XP_032742902;XP_032742903 protein-coding 625969439 Tle4 TLE family member 4, transcriptional corepressor ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN beta-catenin-TCF complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 14430173 14563860 - 22301074;30032202 116890999 MODEL JAAIVD010000001;XM_032891677;XM_032891678;XM_032891679 XP_032747568;XP_032747569;XP_032747570 transducin-like enhancer protein 4 protein-coding 625969468 Atl1 atlastin GTPase 1 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); GTPase-dependent fusogenic activity (ortholog); INVOLVED IN axonogenesis (ortholog); endoplasmic reticulum membrane fusion (ortholog); endoplasmic reticulum tubular network membrane organization (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); genetic disease (ortholog); hereditary sensory neuropathy type 1D (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 7 83563577 83654677 + 22301074;30032202 116905126 MODEL JAAIVD010000026;XM_032907871 XP_032763762 atlastin-1 protein-coding 625969487 LOC116884553 selenoprotein K-like 15 2962510 2963073 + 116884553 MODEL JAAIVD010000010 pseudo 625969488 LOC116905538 uncharacterized LOC116905538 7 5374921 5383684 + 116905538 MODEL JAAIVD010000026;XR_004388547 ncrna 625969493 Cdyl2 chromodomain Y like 2 ENCODES a protein that exhibits histone H3K27me3 reader activity (ortholog); histone H3K9me2/3 reader activity (ortholog); FOUND IN nucleus (ortholog) 17 36212152 36376601 - 30032202 116886110 MODEL JAAIVD010000011;XM_032887442 XP_032743333 chromodomain Y-like protein 2 protein-coding 625969504 Trpc7 transient receptor potential cation channel subfamily C member 7 ENCODES a protein that exhibits calcium channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); manganese ion transport (ortholog); ASSOCIATED WITH lung cancer (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog) 14 81185362 81307840 + 22301074;30032202 116883772 MODEL JAAIVD010000009;XM_032885015 XP_032740906 short transient receptor potential channel 7 protein-coding 625969520 LOC116897718 non-histone chromosomal protein HMG-17-like 4 19498229 19498965 - 116897718 MODEL JAAIVD010000003 pseudo 625969521 C1galt1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 ENCODES a protein that exhibits N-acetylgalactosaminide beta-1,3-galactosyltransferase activity (ortholog); INVOLVED IN angiogenesis (ortholog); intestinal epithelial cell development (ortholog); kidney development (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN membrane (ortholog) 6 130468744 130512523 - 22301074;30032202 116904084 MODEL JAAIVD010000024;XM_032906951 XP_032762842 glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 protein-coding 625969529 LOC116908392 U1 spliceosomal RNA 8 60200089 60200247 - 116908392 MODEL JAAIVD010000027;XR_004388937 snrna 625969532 LOC116894675 trace amine-associated receptor 7b-like 2 210109206 210110282 + 22301074;30032202 116894675 MODEL JAAIVD010000001;XM_032896377 XP_032752268 protein-coding 625969535 LOC116897993 serine/arginine-rich splicing factor 3-like 4 56521502 56521977 - 116897993 MODEL JAAIVD010000003 pseudo 625969536 Dcaf15 DDB1 and CUL4 associated factor 15 ENCODES a protein that exhibits small molecule binding (ortholog); INVOLVED IN protein polyubiquitination (ortholog); regulation of natural killer cell activation (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog) 17 16181572 16188804 + 30032202 116886698 MODEL JAAIVD010000011;XM_032888200 XP_032744091 DDB1- and CUL4-associated factor 15 protein-coding 625969553 LOC116895310 60S ribosomal protein L7-like 3 23308741 23309485 - 116895310 MODEL JAAIVD010000012 pseudo 625969554 Hras HRas proto-oncogene, GTPase ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN adipose tissue development (ortholog); cellular response to gamma radiation (ortholog); cellular senescence (ortholog); PARTICIPATES IN adenosine signaling pathway; endothelin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); Alzheimer's disease (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); Golgi apparatus (ortholog) 2 8283904 8286995 + 22301074;30032202 116890883 MODEL JAAIVD010000001;XM_032891488;XM_032891489 XP_032747379;XP_032747380 GTPase HRas protein-coding 625969570 Trnat-agu transfer RNA threonine (anticodon AGU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41431191 41431264 - 116884157 MODEL JAAIVD010000009 trna 625969571 LOC116912279 cytochrome b-c1 complex subunit 9 FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex III (ortholog) 11 73674112 73676379 - 22301074;30032202 116912279 MODEL JAAIVD010000006;XM_032916275 XP_032772166 protein-coding 625969577 Bag6 BAG cochaperone 6 ENCODES a protein that exhibits Hsp70 protein binding (ortholog); identical protein binding (ortholog); misfolded protein binding (ortholog); INVOLVED IN apoptotic process (ortholog); brain development (ortholog); endoplasmic reticulum stress-induced pre-emptive quality control (ortholog); ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); lung non-small cell carcinoma (ortholog); osteoarthritis (ortholog); FOUND IN BAT3 complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 18 7732784 7745385 + 30032202 116886930 MODEL JAAIVD010000013;XM_032888415;XM_032888416;XM_032888417;XM_032888418;XM_032888419;XM_032888420;XM_032888421;XM_032888422;XM_032888423;XM_032888424;XM_032888425;XM_032888426;XM_032888427;XM_032888428;XM_032888429;XM_032888431;XM_032888432 XP_032744306;XP_032744307;XP_032744308;XP_032744309;XP_032744310;XP_032744311;XP_032744312;XP_032744313;XP_032744314;XP_032744315;XP_032744316;XP_032744317;XP_032744318;XP_032744319;XP_032744320;XP_032744322;XP_032744323 large proline-rich protein BAG6 protein-coding 625969636 LOC116897891 60S ribosomal protein L7a-like 4 31373099 31373439 - 116897891 MODEL JAAIVD010000003;XM_032899297 XP_032755188 protein-coding 625969641 LOC116893868 sperm flagellar protein 1-like 2 61875800 61882095 + 30032202 116893868 MODEL JAAIVD010000001;XM_032895588;XM_032895589;XM_032895590;XM_032895591 XP_032751479;XP_032751480;XP_032751481;XP_032751482 uncharacterized protein LOC116893868 protein-coding 625969661 Znf569 zinc finger protein 569 ASSOCIATED WITH Colorectal Neoplasms (ortholog) 2 166091397 166151717 + 30032202 116892334 MODEL JAAIVD010000001;XM_032893966;XM_032893967;XM_032893968 XP_032749857;XP_032749858;XP_032749859 protein-coding 625969682 LOC116904298 60S ribosomal protein L4-like 6 43802467 43803410 + 116904298 MODEL JAAIVD010000024 pseudo 625969683 LOC116889719 ATP synthase subunit alpha-like 22301074;30032202 116889719 MODEL JAAIVD010000061;XM_032890598 XP_032746489 protein-coding 625969684 Sp140 SP140 nuclear body protein ASSOCIATED WITH B-Cell Chronic Lymphocytic Leukemia (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN nucleus (ortholog) 4 157721965 157769079 + 22301074;30032202 116899579 MODEL JAAIVD010000003;XM_032901518 XP_032757409 nuclear body protein SP140 protein-coding 625969710 LOC116905564 chloride intracellular channel protein 4-like 7 83334816 83339615 - 116905564 MODEL JAAIVD010000026 pseudo 625969711 LOC116893867 cytosolic 5'-nucleotidase 3A-like 2 61823195 61824109 + 116893867 MODEL JAAIVD010000001 pseudo 625969712 LOC116909404 immunity-related GTPase family M protein 1-like 9 40018254 40021498 - 22301074;30032202 116909404 MODEL JAAIVD010000002;XM_032912969 XP_032768860 protein-coding 625969717 Mtmr10 myotubularin related protein 10 ASSOCIATED WITH colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog) 2 136068185 136121563 - 116893258 MODEL JAAIVD010000001;XM_032895117 XP_032751008 myotubularin-related protein 10 protein-coding 625969737 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92623877 92623948 - 116904848 MODEL JAAIVD010000024 trna 625969738 Rph3a rabphilin 3A ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); inositol 1,4,5 trisphosphate binding (ortholog); INVOLVED IN dendritic spine organization (ortholog); regulation of NMDA receptor activity (ortholog); spontaneous neurotransmitter secretion (ortholog); ASSOCIATED WITH COVID-19 (ortholog); genetic disease (ortholog); FOUND IN cholinergic synapse (ortholog); dendritic spine (ortholog); extrinsic component of membrane (ortholog) 16 32813888 32888201 + 22301074 116885593 MODEL JAAIVD010000004;XM_032886897 XP_032742788 rabphilin-3A protein-coding 625969764 LOC116907298 pescadillo homolog 8 22790675 22792483 + 116907298 MODEL JAAIVD010000027 pseudo 625969765 LOC116912836 clusterin-associated protein 1-like 11 63944628 63945881 - 116912836 MODEL JAAIVD010000006 pseudo 625969766 Umod uromodulin ENCODES a protein that exhibits IgG binding (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); apoptotic process (ortholog); apoptotic signaling pathway (ortholog); ASSOCIATED WITH autosomal dominant tubulointerstitial kidney disease (ortholog); autosomal dominant tubulointerstitial kidney disease 1 (ortholog); autosomal dominant tubulointerstitial kidney disease 2 (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) 2 82188814 82202019 + 22301074;30032202 116893925 MODEL JAAIVD010000001;XM_032895645 XP_032751536 protein-coding 625969780 Vamp2 vesicle associated membrane protein 2 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); calmodulin binding (ortholog); identical protein binding (ortholog); INVOLVED IN calcium-ion regulated exocytosis (ortholog); cellular response to insulin stimulus (ortholog); clathrin-dependent endocytosis (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; insulin secretion pathway; vasopressin signaling pathway; ASSOCIATED WITH genetic disease (ortholog); NEURODEVELOPMENTAL DISORDER WITH HYPOTONIA AND AUTISTIC FEATURES WITH OR WITHOUT HYPERKINETIC MOVEMENTS (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN clathrin-coated vesicle (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) 9 48688380 48690978 + 22301074;30032202 116909367 MODEL JAAIVD010000002;XM_032912915;XM_032912917 XP_032768806;XP_032768808 vesicle-associated membrane protein 2 protein-coding 625969792 Mboat7 membrane bound acylglycerophosphatidylinositol O-acyltransferase MBOAT7 ENCODES a protein that exhibits lysophospholipid acyltransferase activity (ortholog); O-acyltransferase activity (ortholog); INVOLVED IN layer formation in cerebral cortex (ortholog); phosphatidylcholine acyl-chain remodeling (ortholog); phosphatidylinositol acyl-chain remodeling (ortholog); ASSOCIATED WITH alcoholic liver cirrhosis (ortholog); autosomal recessive intellectual developmental disorder 57 (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog); mitochondria-associated endoplasmic reticulum membrane contact site (ortholog) 2 178267803 178282176 - 30032202 116892703 MODEL JAAIVD010000001;XM_032894563;XM_032894564 XP_032750454;XP_032750455 lysophospholipid acyltransferase 7;membrane bound O-acyltransferase domain containing 7 protein-coding 625969806 LOC116894670 trace amine-associated receptor 7b 2 210065503 210066579 + 22301074;30032202 116894670 MODEL JAAIVD010000001;XM_032896373 XP_032752264 protein-coding 625969809 LOC116891953 uncharacterized LOC116891953 2 121361367 121367658 - 116891953 MODEL JAAIVD010000001;XR_004386876;XR_004386877 ncrna 625969817 Kif26b kinesin family member 26B INVOLVED IN establishment of cell polarity (ortholog); positive regulation of cell-cell adhesion (ortholog); ureteric bud invasion (ortholog); ASSOCIATED WITH autosomal dominant cerebellar ataxia (ortholog) 10 56877531 57280993 + 22301074;30032202 116911778 MODEL JAAIVD010000005;XM_032915772 XP_032771663 kinesin-like protein KIF26B protein-coding 625969836 LOC116900074 aspartate aminotransferase, mitochondrial-like 5 10252822 10254108 + 116900074 MODEL JAAIVD010000023 pseudo 625969837 Kiaa0754 KIAA0754 ortholog 1 34855567 34860266 + 116896990 MODEL JAAIVD010000025;XM_032898586 XP_032754477 uncharacterized protein KIAA0754 homolog protein-coding 625969842 Tgfbr3 transforming growth factor beta receptor 3 ENCODES a protein that exhibits activin binding (ortholog); BMP binding (ortholog); coreceptor activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); blastocyst development (ortholog); blood vessel development (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH connective tissue disease (ortholog); COVID-19 (ortholog); endometrial adenocarcinoma (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) 11 16885777 16993042 - 116912372 MODEL JAAIVD010000006;XM_032916431 XP_032772322 transforming growth factor beta receptor type 3 protein-coding 625969861 LOC116887739 small nucleolar RNA SNORA17 18 25148332 25148434 + 116887739 MODEL JAAIVD010000013 pseudo 625969862 LOC116902465 U6 spliceosomal RNA 5 130426500 130426606 - 116902465 MODEL JAAIVD010000023;XR_004388083 snrna 625969865 LOC116887559 serine/arginine-rich splicing factor 6-like 18 9533761 9534537 - 116887559 MODEL JAAIVD010000013 pseudo 625969866 Zdhhc22 zDHHC palmitoyltransferase 22 INVOLVED IN protein localization to plasma membrane (ortholog); protein palmitoylation (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) 7 101080341 101099754 - 22301074;30032202 116905313 MODEL JAAIVD010000026;XM_032908202;XM_032908203 XP_032764093;XP_032764094 palmitoyltransferase ZDHHC22;zinc finger DHHC-type palmitoyltransferase 22 protein-coding 625969876 LOC116902630 small Cajal body-specific RNA 21 5 81858015 81858153 + 116902630 MODEL JAAIVD010000023;XR_004388207 ncrna 625969879 LOC116910655 small nucleolar RNA SNORA70 9 34555169 34555292 + 116910655 MODEL JAAIVD010000002 pseudo 625969880 Man2a1 mannosidase alpha class 2A member 1 ENCODES a protein that exhibits hydrolase activity (ortholog); hydrolase activity, hydrolyzing N-glycosyl compounds (ortholog); identical protein binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); liver development (ortholog); lung alveolus development (ortholog); ASSOCIATED WITH congenital dyserythropoietic anemia (ortholog); systemic lupus erythematosus (ortholog); FOUND IN cis-Golgi network (ortholog); extracellular region (ortholog); Golgi apparatus (ortholog) 4 174656845 174820418 + 22301074;30032202 116899693 MODEL JAAIVD010000003;XM_032901717 XP_032757608 alpha-mannosidase 2 protein-coding 625969906 Nisch nischarin ENCODES a protein that exhibits identical protein binding (ortholog); integrin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); glucose metabolic process (ortholog); negative regulation of cell migration (ortholog); ASSOCIATED WITH Bradycardia (ortholog); Breast Neoplasms (ortholog); congestive heart failure (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) 13 6871195 6907648 - 22301074;30032202 116915019 MODEL JAAIVD010000008;XM_032919427;XM_032919428 XP_032775318;XP_032775319 protein-coding 625969937 LOC116900319 olfactory receptor 1052-like 5 64318289 64319227 - 22301074;30032202 116900319 MODEL JAAIVD010000023;XM_032902076 XP_032757967 protein-coding 625969940 Mycbp MYC binding protein ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); spermatogenesis (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 1 34397647 34405046 - 30032202 116896931 MODEL JAAIVD010000025;XM_032898502 XP_032754393 C-Myc-binding protein protein-coding 625969949 LOC116905825 RNA-binding protein 8A-like 7 101859806 101860514 - 22301074;30032202 116905825 MODEL JAAIVD010000026;XM_032908792 XP_032764683 protein-coding 625969954 LOC116900706 nuclear factor 1 B-type-like 1 71201453 71405172 + 22301074;30032202 116900706 MODEL JAAIVD010000025;XM_032902412 XP_032758303 protein-coding 625969969 Hs3st4 heparan sulfate-glucosamine 3-sulfotransferase 4 ENCODES a protein that exhibits [heparan sulfate]-glucosamine 3-sulfotransferase activity (ortholog); INVOLVED IN heparan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog) 2 77490938 77896541 - 30032202 116891542 MODEL JAAIVD010000001;XM_032892698 XP_032748589 heparan sulfate glucosamine 3-O-sulfotransferase 4 protein-coding 625969974 LOC116888329 developmental pluripotency-associated protein 4-like X 125619022 125619770 + 116888329 MODEL JAAIVD010000014 pseudo 625969975 P2rx4 purinergic receptor P2X 4 ENCODES a protein that exhibits ATP binding (ortholog); ATP-gated ion channel activity (ortholog); cadherin binding (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); behavioral response to pain (ortholog); calcium ion transmembrane transport (ortholog); ASSOCIATED WITH congestive heart failure (ortholog); COVID-19 (ortholog); epilepsy (ortholog); FOUND IN apical part of cell (ortholog); axon (ortholog); cell body (ortholog) 16 31098792 31116945 - 22301074;30032202 116885313 MODEL JAAIVD010000004;XM_032886574 XP_032742465 P2X purinoceptor 4 protein-coding 625969991 Ska3 spindle and kinetochore associated complex subunit 3 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); establishment of meiotic spindle orientation (ortholog); metaphase chromosome alignment (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog); kinetochore (ortholog); meiotic spindle (ortholog) 12 67004742 67023465 + 30032202 116913394 MODEL JAAIVD010000007;XM_032917576 XP_032773467 spindle and kinetochore-associated protein 3 protein-coding 625970004 Ubxn2a UBX domain protein 2A ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); negative regulation of ERAD pathway (ortholog); negative regulation of proteolysis (ortholog); FOUND IN cis-Golgi network (ortholog); cytoplasm (ortholog); cytosol (ortholog) 7 25516543 25545249 - 30032202 116906289 MODEL JAAIVD010000026;XM_032909185 XP_032765076 UBX domain-containing protein 2A protein-coding 625970015 LOC116913700 olfactory receptor 11H4-like 12 72567835 72568821 + 22301074 116913700 MODEL JAAIVD010000007;XM_032917996 XP_032773887 protein-coding 625970018 LOC116893366 heat shock protein HSP 90-alpha-like 2 164657099 164659387 + 116893366 MODEL JAAIVD010000001 pseudo 625970019 LOC116883448 40S ribosomal protein S10-like 14 63573767 63574341 - 30032202 116883448 MODEL JAAIVD010000009;XM_032884595 XP_032740486 protein-coding 625970024 Hivep1 HIVEP zinc finger 1 ENCODES a protein that exhibits DNA binding (ortholog); HMG box domain binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN BMP signaling pathway (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH epilepsy (ortholog); myoepithelioma (ortholog); FOUND IN cytosol (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 14 61116856 61151464 + 1901405;30032202 116883238 MODEL JAAIVD010000009;X54250;XM_032884246 CAA38151;XP_032740137 zinc finger protein 40;zinc finger protein AT-BP2 protein-coding 625970033 LOC116913840 transcription factor Spi-C-like 12 25431173 25432983 + 116913840 MODEL JAAIVD010000007 pseudo 625970034 Kiaa0513 KIAA0513 ortholog 17 39757488 39806523 + 116886090 MODEL JAAIVD010000011;XM_032887411;XM_032887412 XP_032743302;XP_032743303 uncharacterized protein KIAA0513 homolog protein-coding 625970052 Zhx3 zinc fingers and homeoboxes 3 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of osteoblast differentiation (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 5 140060922 140163745 - 22301074;30032202 116902249 MODEL JAAIVD010000023;XM_032904666;XM_032904667;XM_032904668 XP_032760557;XP_032760558;XP_032760559 zinc fingers and homeoboxes protein 3 protein-coding 625970066 Ltbp4 latent transforming growth factor beta binding protein 4 ENCODES a protein that exhibits transforming growth factor beta binding (ortholog); INVOLVED IN elastic fiber assembly (ortholog); hormone secretion (ortholog); transforming growth factor beta receptor signaling pathway (ortholog); ASSOCIATED WITH autosomal recessive cutis laxa type IC (ortholog); COVID-19 (ortholog); cutis laxa (ortholog); FOUND IN extracellular matrix (ortholog); microfibril (ortholog) 2 168605335 168639399 + 22301074 116892433 MODEL JAAIVD010000001;XM_032894123 XP_032750014 latent-transforming growth factor beta-binding protein 4 protein-coding 625970101 LOC116883327 uncharacterized LOC116883327 14 63398360 63409380 - 116883327 MODEL JAAIVD010000009;XR_004385748 ncrna 625970106 Mmgt1 membrane magnesium transporter 1 ENCODES a protein that exhibits cobalt ion transmembrane transporter activity (ortholog); ferrous iron transmembrane transporter activity (ortholog); magnesium ion transmembrane transporter activity (ortholog); INVOLVED IN cobalt ion transport (ortholog); copper ion transport (ortholog); iron ion transport (ortholog); ASSOCIATED WITH Muscle Hypotonia (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); EMC complex (ortholog) X 116607484 116618348 + 30032202 116888719 MODEL JAAIVD010000014;XM_032890011 XP_032745902 protein-coding 625970114 Apbb1 amyloid beta precursor protein binding family B member 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN axon guidance (ortholog); DNA damage response (ortholog); DNA repair-dependent chromatin remodeling (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Brain Injuries (ortholog); nicotine dependence (ortholog); FOUND IN dendritic spine (ortholog); glutamatergic synapse (ortholog); growth cone (ortholog) 2 104394780 104417613 - 1923810;30032202;7800475;8537337 116891818 Q5XWE9 MODEL AY730550;JAAIVD010000001;X60469;XM_032893174;XM_032893175;XM_032893177;XM_032893178;XM_032893179;XM_032893180 AAU45391;CAA42999;XP_032749065;XP_032749066;XP_032749068;XP_032749069;XP_032749070;XP_032749071 FE65 amyloid-beta A4 precursor protein-binding family B member 1;integrase-like protein, APP interacting protein protein-coding 625970146 LOC116911332 transmembrane protein 126A-like 10 3088967 3089621 - 116911332 MODEL JAAIVD010000005 pseudo 625970147 LOC116888931 eukaryotic translation initiation factor 4B-like X 188954 190823 + 116888931 MODEL JAAIVD010000014 pseudo 625970148 Dok1 docking protein 1 INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); intracellular signal transduction (ortholog); macrophage colony-stimulating factor signaling pathway (ortholog); PARTICIPATES IN insulin signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH lung adenocarcinoma (ortholog); Lung Neoplasms (ortholog); Ovarian Neoplasms (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) 6 63190799 63193291 + 30032202 116902754 MODEL JAAIVD010000024;XM_032905099 XP_032760990 protein-coding 625970157 LOC116910270 60S ribosomal protein L14-like 9 35804681 35805309 + 116910270 MODEL JAAIVD010000002 pseudo 625970158 Gpbar1 G protein-coupled bile acid receptor 1 ENCODES a protein that exhibits G protein-coupled bile acid receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled bile acid receptor signaling pathway (ortholog); cellular response to bile acid (ortholog); energy homeostasis (ortholog); ASSOCIATED WITH autosomal dominant polycystic kidney disease (ortholog); autosomal recessive polycystic kidney disease (ortholog); Constipation (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog); signaling receptor complex (ortholog) 4 147729105 147731614 + 22301074;30032202 116898224 MODEL JAAIVD010000003;XM_032899579 XP_032755470 G-protein coupled bile acid receptor 1 protein-coding 625970164 LOC116890406 U6 spliceosomal RNA 1 27816262 27816364 - 116890406 MODEL JAAIVD010000025;XR_004386608 snrna 625970167 Cpeb3 cytoplasmic polyadenylation element binding protein 3 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); mRNA 3'-UTR binding (ortholog); mRNA regulatory element binding translation repressor activity (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); cellular response to amino acid stimulus (ortholog); long-term memory (ortholog); ASSOCIATED WITH genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN apical dendrite (ortholog); CCR4-NOT complex (ortholog); cytoplasm (ortholog) 2 36624856 36801987 + 30032202 116891131 MODEL JAAIVD010000001;XM_032891854;XM_032891855;XM_032891856;XM_032891857;XM_032891858;XM_032891859;XM_032891860;XM_032891861;XM_032891863;XM_032891864;XM_032891865 XP_032747745;XP_032747746;XP_032747747;XP_032747748;XP_032747749;XP_032747750;XP_032747751;XP_032747752;XP_032747754;XP_032747755;XP_032747756 cytoplasmic polyadenylation element-binding protein 3 protein-coding 625970209 LOC116912705 zinc finger CCCH domain-containing protein 3-like 1 248125449 248159174 - 30032202 116912705 MODEL JAAIVD010000025;XM_032916834 XP_032772725 protein-coding 625970217 Themis thymocyte selection associated INVOLVED IN negative T cell selection (ortholog); positive T cell selection (ortholog); T cell receptor signaling pathway (ortholog); ASSOCIATED WITH celiac disease (ortholog); inflammatory bowel disease (ortholog); T-Lymphocytopenia (ortholog); FOUND IN cell-cell junction (ortholog); COP9 signalosome (ortholog); cytoplasm (ortholog) 2 214735085 214937794 + 30032202 116894691 MODEL JAAIVD010000001;XM_032896390 XP_032752281 protein THEMIS protein-coding 625970227 LOC116900277 olfactory receptor 5AL1-like 5 63442416 63443360 - 22301074;30032202 116900277 MODEL JAAIVD010000023;XM_032902030 XP_032757921 protein-coding 625970230 Cibar2 CBY1 interacting BAR domain containing 2 ASSOCIATED WITH Crohn's disease (ortholog); FOUND IN ciliary basal body (ortholog) 17 39807580 39819149 - 22301074;30032202 116886558 MODEL JAAIVD010000011;XM_032888075 XP_032743966 protein FAM92B protein-coding 625970242 Dennd2d DENN domain containing 2D ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); FOUND IN cytosol (ortholog) 3 51823133 51842230 - 30032202 116896403 MODEL JAAIVD010000012;XM_032897542;XM_032897543;XM_032897544 XP_032753433;XP_032753434;XP_032753435 DENN domain-containing protein 2D protein-coding 625970264 Map6 microtubule associated protein 6 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN axonal transport of mitochondrion (ortholog); dendrite morphogenesis (ortholog); lysosome localization (ortholog); ASSOCIATED WITH Hyperkinesis (ortholog); schizophrenia (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); Golgi apparatus (ortholog) 2 97543224 97607529 + 22301074;30032202 116891719 MODEL JAAIVD010000001;XM_032893009 XP_032748900 microtubule-associated protein 6 protein-coding 625970272 LOC116885985 U6 spliceosomal RNA 16 17983111 17983215 - 116885985 MODEL JAAIVD010000004;XR_004386062 snrna 625970275 LOC116914131 small nucleolar RNA SNORA17 12 35115037 35115167 + 116914131 MODEL JAAIVD010000007;XR_004389692 snorna 625970278 Rab15 RAB15, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); INVOLVED IN positive regulation of regulated secretory pathway (ortholog); receptor-mediated endocytosis (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog); endosome membrane (ortholog) 7 90931032 90955618 - 22301074 116905187 MODEL JAAIVD010000026;XM_032907976;XM_032907977 XP_032763867;XP_032763868 ras-related protein Rab-15 protein-coding 625970292 LOC116886044 H/ACA ribonucleoprotein complex subunit 2-like 17 40993069 40993511 + 116886044 MODEL JAAIVD010000011 pseudo 625970293 Fbxl19 F-box and leucine rich repeat protein 19 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); unmethylated CpG binding (ortholog); zinc ion binding (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH psoriasis (ortholog); psoriatic arthritis (ortholog); FOUND IN SCF ubiquitin ligase complex (ortholog) 2 74135504 74155448 - 22301074;30032202 116891461 MODEL JAAIVD010000001;XM_032892541;XM_032892542;XM_032892543;XM_032892544;XM_032892545 XP_032748432;XP_032748433;XP_032748434;XP_032748435;XP_032748436 F-box/LRR-repeat protein 19 protein-coding 625970319 Trnak-uuu transfer RNA lysine (anticodon UUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889733 MODEL JAAIVD010000065 trna 625970320 LOC116889678 50S ribosomal protein L17-like 22301074;30032202 116889678 MODEL JAAIVD010000048;XM_032890568 XP_032746459 protein-coding 625970321 Wbp1 WW domain binding protein 1 ENCODES a protein that exhibits WW domain binding (ortholog) 6 63103896 63106288 + 30032202 116903626 MODEL JAAIVD010000024;XM_032906283;XM_032906285;XM_032906286 XP_032762174;XP_032762176;XP_032762177 WW domain-binding protein 1 protein-coding 625970337 Baiap3 BAI1 associated protein 3 ENCODES a protein that exhibits calcium ion binding (ortholog); phospholipid binding (ortholog); SNARE binding (ortholog); INVOLVED IN dense core granule maturation (ortholog); G protein-coupled receptor signaling pathway (ortholog); modulation of chemical synaptic transmission (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); FOUND IN cytosol (ortholog); dense core granule (ortholog); early endosome membrane (ortholog) 9 2508640 2522580 - 116910555 MODEL JAAIVD010000002;XM_032914464 XP_032770355 BAI1-associated protein 3 protein-coding 625970375 Dip2a disco interacting protein 2 homolog A ENCODES a protein that exhibits acetyl-CoA synthetase activity (ortholog); INVOLVED IN acetyl-CoA biosynthetic process (ortholog); dendritic spine morphogenesis (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); long QT syndrome (ortholog); FOUND IN cell surface (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) 8 106783263 106861452 + 30032202 116907867 MODEL JAAIVD010000027;XM_032911055 XP_032766946 disco-interacting protein 2 homolog A protein-coding 625970417 LOC116893518 mRNA turnover protein 4 homolog 2 192876367 192878115 - 116893518 MODEL JAAIVD010000001 pseudo 625970418 LOC116886729 small nucleolar RNA SNORA51 17 37780677 37780809 + 116886729 MODEL JAAIVD010000011;XR_004386139 snorna 625970421 Blcap BLCAP apoptosis inducing factor INVOLVED IN apoptotic nuclear changes (ortholog) 5 136901231 136910037 - 116902227 MODEL JAAIVD010000023;XM_032904632 XP_032760523 bladder cancer-associated protein protein-coding 625970427 Hirip3 HIRA interacting protein 3 ENCODES a protein that exhibits H2A-H2B histone complex chaperone activity (ortholog); INVOLVED IN chromatin organization (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 75031156 75034158 - 30032202 116891500 MODEL JAAIVD010000001;XM_032892618;XM_032892620 XP_032748509;XP_032748511 HIRA-interacting protein 3 protein-coding 625970443 Atg14 autophagy related 14 ENCODES a protein that exhibits GTPase binding (ortholog); phosphatidylinositol 3-kinase inhibitor activity (ortholog); protein-membrane adaptor activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagosome maturation (ortholog); autophagosome membrane docking (ortholog); PARTICIPATES IN autophagy pathway; FOUND IN autophagosome (ortholog); axoneme (ortholog); extrinsic component of omegasome membrane (ortholog) 12 75469676 75500067 + 30032202 116913446 MODEL JAAIVD010000007;XM_032917647 XP_032773538 beclin 1-associated autophagy-related key regulator protein-coding 625970457 Chlsn cholesin ENCODES a protein that exhibits hormone activity (ortholog); INVOLVED IN negative regulation of cholesterol biosynthetic process (ortholog); FOUND IN extracellular region (ortholog) 16 13738965 13840714 + 116885249 MODEL JAAIVD010000004;XM_032886489 XP_032742380 C16H7orf50 chromosome 16 C7orf50 homolog;uncharacterized protein C7orf50 homolog protein-coding 625970466 Bpifa3 BPI fold containing family A member 3 5 133461198 133473594 + 22301074 116900718 MODEL JAAIVD010000023;XM_032902422;XM_032902424 XP_032758313;XP_032758315 BPI fold-containing family A member 3 protein-coding 625970480 LOC116883968 cytochrome P450 4A10-like 1 39270107 39283061 + 116883968 MODEL JAAIVD010000025 pseudo 625970481 Rab34 RAB34, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GTP-dependent protein binding (ortholog); GTPase activity (ortholog); INVOLVED IN antigen processing and presentation (ortholog); cellular response to glucose stimulus (ortholog); cilium assembly (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 1 (ortholog); orofaciodigital syndrome XX (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); cytoplasmic vesicle (ortholog) 9 92247911 92251873 - 22301074;30032202 116909988 MODEL JAAIVD010000002;XM_032913770 XP_032769661 ras-related protein Rab-34 protein-coding 625970496 Boc BOC cell adhesion associated, oncogene regulated INVOLVED IN axon guidance (ortholog); positive regulation of myoblast differentiation (ortholog); smoothened signaling pathway (ortholog); PARTICIPATES IN altered Hedgehog signaling pathway; Hedgehog signaling pathway; pancreatic cancer pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); gastrointestinal stromal tumor (ortholog); holoprosencephaly (ortholog); FOUND IN axon (ortholog); axonal growth cone (ortholog); growth cone (ortholog) 4 29364030 29401516 - 22301074;30032202 116898866 MODEL JAAIVD010000003;XM_032900233;XM_032900234 XP_032756124;XP_032756125 brother of CDO protein-coding 625970520 Slc39a7 solute carrier family 39 member 7 ENCODES a protein that exhibits zinc ion transmembrane transporter activity (ortholog); INVOLVED IN B cell differentiation (ortholog); intracellular zinc ion homeostasis (ortholog); regulation of ferroptosis (ortholog); ASSOCIATED WITH agammaglobulinemia 9 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 18 8294629 8298123 + 22301074;30032202 116887440 MODEL JAAIVD010000013;XM_032889054 XP_032744945 zinc transporter SLC39A7 protein-coding 625970532 LOC116915123 small nucleolar RNA SNORA17 13 22381023 22381154 + 116915123 MODEL JAAIVD010000008;XR_004389804 snorna 625970535 LOC116904315 katanin p80 WD40 repeat-containing subunit B1-like 6 59954882 59955804 - 116904315 MODEL JAAIVD010000024 pseudo 625970536 Krt7 keratin 7 ASSOCIATED WITH cholangiocarcinoma (ortholog); Chronic Hepatitis (ortholog); Copper-Overload Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 1 261660490 261675608 - 22301074;30032202 116883758 MODEL JAAIVD010000025;XM_032885008 XP_032740899 keratin, type II cytoskeletal 7 protein-coding 625970549 Iqcn IQ motif containing N INVOLVED IN single fertilization (ortholog); sperm flagellum assembly (ortholog); spermatid development (ortholog); ASSOCIATED WITH spermatogenic failure 78 (ortholog); FOUND IN mitochondrion (ortholog) 13 12957206 12967053 + 22301074 116914554 MODEL JAAIVD010000008;XM_032918904 XP_032774795 IQ domain-containing protein N protein-coding 625970553 LOC116912738 transformer-2 protein homolog beta-like 11 43217643 43219588 + 116912738 MODEL JAAIVD010000006 pseudo 625970554 Rad23a RAD23 nucleotide excision repair protein A ENCODES a protein that exhibits histone H4K20 demethylase activity (ortholog); kinase binding (ortholog); polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN DNA damage response (ortholog); nucleotide-excision repair (ortholog); positive regulation of cell cycle (ortholog); PARTICIPATES IN nucleotide excision repair pathway; ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 17 15450582 15456617 + 22301074;30032202 116886216 MODEL JAAIVD010000011;XM_032887606;XM_032887607;XM_032887608 XP_032743497;XP_032743498;XP_032743499 RAD23 homolog A, nucleotide excision repair protein;UV excision repair protein RAD23 homolog A protein-coding 625970574 Rasal2 RAS protein activator like 2 INVOLVED IN adipose tissue development (ortholog); gene expression (ortholog); multicellular organism growth (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Disease Progression (ortholog); Experimental Neoplasms (ortholog) 10 36485362 36754830 - 22301074 116911065 MODEL JAAIVD010000005;XM_032914829;XM_032914830 XP_032770720;XP_032770721 ras GTPase-activating protein nGAP protein-coding 625970598 LOC116896652 uncharacterized LOC116896652 3 64394213 64395842 + 116896652 MODEL JAAIVD010000012;XR_004387353 ncrna 625970603 LOC116885544 S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1 16 23642525 23725966 - 22301074;30032202 116885544 MODEL JAAIVD010000004;XM_032886838 XP_032742729 protein-coding 625970623 LOC116887297 40S ribosomal protein S19-like 18 16180856 16182097 - 116887297 MODEL JAAIVD010000013 pseudo 625970624 Wdr11 WD repeat domain 11 INVOLVED IN cilium assembly (ortholog); head development (ortholog); heart development (ortholog); ASSOCIATED WITH amenorrhea (ortholog); Autosomal Recessive Intellectual Developmental Disorder 78 (ortholog); CHARGE syndrome (ortholog); FOUND IN axoneme (ortholog); ciliary basal body (ortholog); cilium (ortholog) 2 72425576 72470401 - 22301074;30032202 116891428 MODEL JAAIVD010000001;XM_032892480;XM_032892481 XP_032748371;XP_032748372 WD repeat-containing protein 11 protein-coding 625970661 LOC116885709 ubiquitin-conjugating enzyme E2 N-like 1 144638 145095 + 116885709 MODEL JAAIVD010000025 pseudo 625970662 Ash1l ASH1 like histone lysine methyltransferase ENCODES a protein that exhibits histone H3K36 methyltransferase activity (ortholog); histone H3K4 methyltransferase activity (ortholog); histone H3K9 methyltransferase activity (ortholog); INVOLVED IN decidualization (ortholog); flagellated sperm motility (ortholog); negative regulation of acute inflammatory response (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal dominant intellectual developmental disorder 52 (ortholog); Developmental Disabilities (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 3 64600295 64715665 - 22301074 116896671 MODEL JAAIVD010000012;XM_032898040 XP_032753931 histone-lysine N-methyltransferase ASH1L protein-coding 625970694 LOC116887620 putative olfactory receptor 2I1 18 10144554 10145749 - 116887620 MODEL JAAIVD010000013 pseudo 625970695 LOC116905932 40S ribosomal protein S26-like 7 18823871 18824594 + 116905932 MODEL JAAIVD010000026 pseudo 625970696 Dnmt3l DNA methyltransferase 3 like ENCODES a protein that exhibits enzyme activator activity (ortholog); enzyme binding (ortholog); INVOLVED IN autosome genomic imprinting (ortholog); chorionic trophoblast cell differentiation (ortholog); DNA methylation-dependent constitutive heterochromatin formation (ortholog); ASSOCIATED WITH choline deficiency disease (ortholog); FOUND IN condensed nuclear chromosome (ortholog); cytoplasm (ortholog); ESC/E(Z) complex (ortholog) 18 1337010 1351603 + 30032202 116887549 MODEL JAAIVD010000013;XM_032889182 XP_032745073 DNA (cytosine-5)-methyltransferase 3-like protein-coding 625970712 Sdhaf4 succinate dehydrogenase complex assembly factor 4 ENCODES a protein that exhibits enzyme activator activity (ortholog); INVOLVED IN cellular respiration (ortholog); innate immune response (ortholog); mitochondrial respiratory chain complex II assembly (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); FOUND IN mitochondrion (ortholog) 4 101353144 101361746 - 30032202 116899257 MODEL JAAIVD010000003;XM_032900873;XM_032900874 XP_032756764;XP_032756765 succinate dehydrogenase assembly factor 4, mitochondrial protein-coding 625970722 Pa2g4 proliferation-associated 2G4 ENCODES a protein that exhibits nucleic acid binding (ortholog); transcription corepressor activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of DNA-templated transcription (ortholog); positive regulation of cell differentiation (ortholog); ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) 1 156026094 156034047 - 116906245 MODEL JAAIVD010000025;XM_032909154 XP_032765045 proliferation-associated protein 2G4 protein-coding 625970739 Trnae-uuc transfer RNA glutamic acid (anticodon UUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 8 95725347 95725418 - 116908473 MODEL JAAIVD010000027 trna 625970740 Rtp2 receptor transporter protein 2 ENCODES a protein that exhibits olfactory receptor binding (ortholog); INVOLVED IN protein insertion into membrane (ortholog); FOUND IN cell surface (ortholog) 4 8708430 8713380 - 30032202 116897822 MODEL JAAIVD010000003;XM_032899237 XP_032755128 receptor-transporting protein 2 protein-coding 625970748 LOC116895870 sterile alpha motif domain-containing protein 3-like 3 104291656 104292544 + 116895870 MODEL JAAIVD010000012 pseudo 625970749 LOC116895373 gamma-aminobutyric acid receptor-associated protein-like 2 3 53393454 53393807 - 116895373 MODEL JAAIVD010000012 pseudo 625970750 Kbtbd13 kelch repeat and BTB domain containing 13 ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN actin filament organization (ortholog); regulation of the force of skeletal muscle contraction (ortholog); relaxation of skeletal muscle (ortholog); ASSOCIATED WITH Actin-Accumulation Myopathy (ortholog); colorectal cancer (ortholog); genetic disease (ortholog) 8 59699605 59700981 - 22301074 116908124 MODEL JAAIVD010000027;XM_032911414 XP_032767305 kelch repeat and BTB domain-containing protein 13 protein-coding 625970753 LOC116894072 olfactory receptor 51F1-like 2 102988770 102989726 + 116894072 MODEL JAAIVD010000001 pseudo 625970754 LOC116884863 uncharacterized LOC116884863 15 6256967 6288115 - 116884863 MODEL JAAIVD010000010;XR_004385905 ncrna 625970759 Epc1 enhancer of polycomb homolog 1 ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); enzyme-substrate adaptor activity (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of gene expression, epigenetic (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH Neointima (ortholog); FOUND IN NuA4 histone acetyltransferase complex (ortholog); nuclear body (ortholog); nuclear membrane (ortholog) 14 29256291 29346681 - 30032202 116883827 MODEL JAAIVD010000009;XM_032885084;XM_032885085;XM_032885086 XP_032740975;XP_032740976;XP_032740977 protein-coding 625970784 LOC116884099 small nucleolar RNA U13 14 66111136 66111240 - 116884099 MODEL JAAIVD010000009;XR_004385838 snorna 625970787 Ccnyl1 cyclin Y like 1 INVOLVED IN flagellated sperm motility (ortholog); neurogenesis (ortholog); regulation of canonical Wnt signaling pathway (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) 4 138574824 138610452 + 22301074;30032202 116899452 MODEL JAAIVD010000003;XM_032901231 XP_032757122 cyclin-Y-like protein 1 protein-coding 625970801 Apcdd1l APC down-regulated 1 like 5 144176983 144187743 + 30032202 116901077 MODEL JAAIVD010000023;XM_032902642 XP_032758533 protein APCDD1-like protein-coding 625970808 Tdrd6 tudor domain containing 6 INVOLVED IN germ cell development (ortholog); spermatogenesis (ortholog); spliceosomal snRNP assembly (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); FOUND IN chromatoid body (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) 4 86212325 86227102 + 30032202 116898054 MODEL JAAIVD010000003;XM_032899448;XM_032899449;XM_032899450;XM_032899451 XP_032755339;XP_032755340;XP_032755341;XP_032755342 tudor domain-containing protein 6 protein-coding 625970823 Stoml2 stomatin like 2 ENCODES a protein that exhibits cardiolipin binding (ortholog); GTPase binding (ortholog); T cell receptor binding (ortholog); INVOLVED IN CD4-positive, alpha-beta T cell activation (ortholog); intracellular calcium ion homeostasis (ortholog); lipid localization (ortholog); PARTICIPATES IN mitochondria fusion pathway; ASSOCIATED WITH contact dermatitis (ortholog); FOUND IN actin cytoskeleton (ortholog); cytosol (ortholog); immunological synapse (ortholog) 1 3473232 3476818 + 22301074 116891184 MODEL JAAIVD010000025;XM_032892006 XP_032747897 stomatin-like protein 2, mitochondrial protein-coding 625970837 LOC116907362 olfactory receptor 150-like 8 82286353 82287279 + 22301074;30032202 116907362 MODEL JAAIVD010000027;XM_032910309 XP_032766200 protein-coding 625970840 LOC116883520 histone H2A type 1-B-like 14 41875076 41875713 + 22301074;30032202 116883520 MODEL JAAIVD010000009;XM_032884693 XP_032740584 protein-coding 625970845 Ap4m1 adaptor related protein complex 4 subunit mu 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); Golgi to endosome transport (ortholog); Golgi to lysosome transport (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); hereditary spastic paraplegia (ortholog); FOUND IN AP-4 adaptor complex (ortholog); early endosome (ortholog); trans-Golgi network (ortholog) 16 15544477 15552688 + 22301074;30032202 116885192 MODEL JAAIVD010000004;XM_032886412 XP_032742303 AP-4 complex subunit mu-1 protein-coding 625970864 LOC116888676 uncharacterized LOC116888676 X 114034953 114077001 - 116888676 MODEL JAAIVD010000014;XR_004386333;XR_004386334 ncrna 625970876 Cntf ciliary neurotrophic factor ENCODES a protein that exhibits ciliary neurotrophic factor receptor binding (ortholog); cytokine activity (ortholog); growth factor activity (ortholog); INVOLVED IN astrocyte activation (ortholog); axon regeneration (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); Cerebral Hemorrhage (ortholog); FOUND IN axon (ortholog); extracellular region (ortholog); glial cell projection (ortholog) 2 12800940 12805551 - 22301074;30032202 116890996 MODEL JAAIVD010000001;XM_032891674 XP_032747565 protein-coding 625970882 LOC116883880 cysteine-rich protein 2-like 1 262192799 262193891 + 116883880 MODEL JAAIVD010000025;XR_004385801 pseudo 625970885 LOC116906395 small nucleolar RNA SNORD113/SNORD114 family 7 127263371 127263444 + 116906395 MODEL JAAIVD010000026;XR_004388663 snorna 625970888 Rnf215 ring finger protein 215 11 73117958 73123957 + 30032202 116912843 MODEL JAAIVD010000006;XM_032917047;XM_032917048 XP_032772938;XP_032772939 protein-coding 625970903 LOC116884775 60S ribosomal protein L10-like 15 74125192 74125946 - 116884775 MODEL JAAIVD010000010 pseudo 625970904 LOC116888953 ferritin light chain 1-like X 4496586 4516996 + 116888953 MODEL JAAIVD010000014 pseudo 625970905 LOC116900900 vacuolar protein sorting-associated protein 26C-like 5 74540150 74687767 - 116900900 MODEL JAAIVD010000023 pseudo 625970906 LOC116890489 small Cajal body-specific RNA 1 1 25405265 25405429 + 116890489 MODEL JAAIVD010000025;XR_004386676 ncrna 625970909 Gdf11 growth differentiation factor 11 INVOLVED IN activin receptor signaling pathway (ortholog); animal organ morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Myocardial Reperfusion Injury (ortholog); orofacial cleft (ortholog); FOUND IN extracellular region (ortholog); protein-containing complex (ortholog) 1 156361832 156370885 - 22301074;30032202 116906579 MODEL JAAIVD010000025;XM_032909315 XP_032765206 growth/differentiation factor 11 protein-coding 625970915 LOC116910278 ral guanine nucleotide dissociation stimulator-like 9 39149754 39162836 - 116910278 MODEL JAAIVD010000002 pseudo 625970916 LOC116911034 sodium/potassium-transporting ATPase subunit alpha-2 10 51384304 51407310 - 22301074;30032202 116911034 MODEL JAAIVD010000005;XM_032914774;XM_032914775 XP_032770665;XP_032770666 protein-coding 625970946 Scml4 Scm polycomb group protein like 4 18 42572380 42662699 + 22301074 116887289 MODEL JAAIVD010000013;XM_032888868 XP_032744759 sex comb on midleg-like protein 4 protein-coding 625970957 Tspan10 tetraspanin 10 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN establishment of protein localization to organelle (ortholog); protein maturation (ortholog) 9 63578382 63582688 - 22301074;30032202 116910399 MODEL JAAIVD010000002;XM_032914239 XP_032770130 tetraspanin-10 protein-coding 625970963 Tmem234 transmembrane protein 234 1 28541838 28550668 - 116896104 MODEL JAAIVD010000025;XM_032897072 XP_032752963 protein-coding 625970972 LOC116893668 DNA-directed RNA polymerases I, II, and III subunit RPABC4-like 2 12110238 12110696 - 22301074;30032202 116893668 MODEL JAAIVD010000001;XM_032895383 XP_032751274 protein-coding 625970977 Mtcp1 mature T cell proliferation 1 ENCODES a protein that exhibits protein kinase binding (ortholog); protein serine/threonine kinase activator activity (ortholog); INVOLVED IN intracellular signal transduction (ortholog) 15 34781383 34784805 - 22301074;30032202 116884473 MODEL JAAIVD010000010;XM_032885589 XP_032741480 protein p13 MTCP-1 protein-coding 625970985 Hspb6 heat shock protein family B (small) member 6 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); protein folding chaperone (ortholog); protein homodimerization activity (ortholog); INVOLVED IN negative regulation of cardiac muscle cell apoptotic process (ortholog); positive regulation of angiogenesis (ortholog); protein folding (ortholog); ASSOCIATED WITH Drug-Related Side Effects and Adverse Reactions (ortholog); heart disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) 2 165454295 165457082 - 22301074;30032202 116892313 MODEL JAAIVD010000001;XM_032893936;XM_032893937 XP_032749827;XP_032749828 heat shock protein beta-6 protein-coding 625970996 LOC116909219 DNA repair endonuclease XPF 9 8148311 8193003 + 30032202 116909219 MODEL JAAIVD010000002;XM_032912720 XP_032768611 protein-coding 625971006 LOC116910945 uncharacterized LOC116910945 10 76903296 76905524 - 116910945 MODEL JAAIVD010000005 pseudo 625971007 Gzmm granzyme M ENCODES a protein that exhibits endopeptidase activity (ortholog); serine-type endopeptidase activity (ortholog); serine-type peptidase activity (ortholog); INVOLVED IN apoptotic process (ortholog); T cell mediated cytotoxicity (ortholog) 1 155179043 155184759 - 22301074 116905713 MODEL JAAIVD010000025;XM_032908687;XM_032908691 XP_032764578;XP_032764582 protein-coding 625971018 Slurp1 secreted LY6/PLAUR domain containing 1 ENCODES a protein that exhibits acetylcholine receptor activator activity (ortholog); INVOLVED IN locomotory behavior (ortholog); negative regulation of cell migration (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH mal de Meleda (ortholog); palmoplantar keratosis (ortholog); FOUND IN extracellular region (ortholog) 1 247469500 247470818 - 30032202 116890131 MODEL JAAIVD010000025;XM_032890868 XP_032746759 secreted Ly-6/uPAR-related protein 1 protein-coding 625971024 Ppp1r12a protein phosphatase 1 regulatory subunit 12A ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); enzyme inhibitor activity (ortholog); phosphatase regulator activity (ortholog); INVOLVED IN cellular response to xenobiotic stimulus (ortholog); centrosome cycle (ortholog); mitotic cell cycle (ortholog); ASSOCIATED WITH genetic disease (ortholog); GENITOURINARY AND/OR BRAIN MALFORMATION SYNDROME (ortholog); FOUND IN A band (ortholog); actin cytoskeleton (ortholog); centrosome (ortholog) 1 186387602 186498148 + 22301074;30032202 116908774 MODEL JAAIVD010000025;XM_032912149;XM_032912156;XM_032912166;XM_032912174 XP_032768040;XP_032768047;XP_032768057;XP_032768065 protein-coding 625971061 LOC116894898 U6 spliceosomal RNA 2 17960597 17960706 - 116894898 MODEL JAAIVD010000001;XR_004387103 snrna 625971064 LOC116894644 cytochrome c, somatic-like 2 199409886 199410221 + 22301074;30032202 116894644 MODEL JAAIVD010000001;XM_032896356 XP_032752247 protein-coding 625971068 LOC116889709 glyceraldehyde-3-phosphate dehydrogenase-like 1 145450946 145451965 + 116889709 MODEL JAAIVD010000025 pseudo 625971069 Ano3 anoctamin 3 ENCODES a protein that exhibits intracellularly calcium-gated chloride channel activity (ortholog); phospholipid scramblase activity (ortholog); INVOLVED IN calcium activated galactosylceramide scrambling (ortholog); calcium activated phosphatidylcholine scrambling (ortholog); detection of mechanical stimulus (ortholog); ASSOCIATED WITH dystonia (ortholog); dystonia 24 (ortholog); Febrile Seizures (ortholog); FOUND IN cilium (ortholog) 5 88934668 89217770 - 22301074;30032202 116901734 MODEL JAAIVD010000023;XM_032903871 XP_032759762 anoctamin-3 protein-coding 625971100 LOC116900458 olfactory receptor 140-like 5 71168464 71169396 - 22301074 116900458 MODEL JAAIVD010000023;XM_032902199 XP_032758090 protein-coding 625971103 Mphosph8 M-phase phosphoprotein 8 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K9me2/3 reader activity (ortholog); INVOLVED IN constitutive heterochromatin formation (ortholog); negative regulation of gene expression via chromosomal CpG island methylation (ortholog); negative regulation of gene expression, epigenetic (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); heterochromatin (ortholog) 12 68135445 68162885 - 22301074;30032202 116913083 MODEL JAAIVD010000007;XM_032917214 XP_032773105 protein-coding 625971121 Slc26a3 solute carrier family 26 member 3 ENCODES a protein that exhibits bicarbonate transmembrane transporter activity (ortholog); chloride transmembrane transporter activity (ortholog); chloride:bicarbonate antiporter activity (ortholog); INVOLVED IN cellular response to cAMP (ortholog); intracellular pH elevation (ortholog); membrane hyperpolarization (ortholog); PARTICIPATES IN cimetidine pharmacodynamics pathway; esomeprazole pharmacodynamics pathway; famotidine pharmacodynamics pathway; ASSOCIATED WITH congenital secretory chloride diarrhea 1 (ortholog); diarrhea (ortholog); genetic disease (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); membrane (ortholog) 7 44813363 44853386 + 22301074;30032202 116904950 MODEL JAAIVD010000026;XM_032907594;XM_032907595;XM_032907596;XM_032907597;XM_032907598;XM_032907599;XM_032907600;XM_032907601;XM_032907602 XP_032763485;XP_032763486;XP_032763487;XP_032763488;XP_032763489;XP_032763490;XP_032763491;XP_032763492;XP_032763493 chloride anion exchanger protein-coding 625971167 LOC116889727 ATP-dependent DNA helicase PcrA-like 22301074;30032202 116889727 MODEL JAAIVD010000065;XM_032890602 XP_032746493 protein-coding 625971168 Zranb2 zinc finger RANBP2-type containing 2 FOUND IN nucleoplasm (ortholog) 3 4052797 4066649 - 30032202 116896131 MODEL JAAIVD010000012;XM_032897115 XP_032753006 zinc finger Ran-binding domain-containing protein 2 protein-coding 625971182 LOC116899343 heat shock protein HSP 90-beta-like 4 119422282 119424488 - 22301074;30032202 116899343 MODEL JAAIVD010000003;XM_032901031 XP_032756922 protein-coding 625971186 LOC116889179 peptidyl-prolyl cis-trans isomerase D-like X 54818379 54819489 - 116889179 MODEL JAAIVD010000014 pseudo 625971187 Kcp kielin cysteine rich BMP regulator INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); positive regulation of BMP signaling pathway (ortholog); FOUND IN extracellular region (ortholog) 6 110057179 110093376 + 22301074 116904013 MODEL JAAIVD010000024;XM_032906833;XM_032906834 XP_032762724;XP_032762725 kielin/chordin-like protein protein-coding 625971240 LOC116906127 uncharacterized LOC116906127 7 86700843 86705721 + 116906127 MODEL JAAIVD010000026 pseudo 625971241 LOC116907574 olfactory receptor 145-like 8 31544085 31545032 + 22301074;30032202 116907574 MODEL JAAIVD010000027;XM_032910609 XP_032766500 protein-coding 625971244 Tgfbi transforming growth factor beta induced ENCODES a protein that exhibits collagen binding (ortholog); extracellular matrix binding (ortholog); identical protein binding (ortholog); INVOLVED IN angiogenesis (ortholog); cell adhesion (ortholog); chondrocyte differentiation (ortholog); ASSOCIATED WITH corneal dystrophy (ortholog); Diabetic Nephropathies (ortholog); epithelial basement membrane dystrophy (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) 14 81432381 81459936 - 30032202 116883776 MODEL JAAIVD010000009;XM_032885020 XP_032740911 transforming growth factor-beta-induced protein ig-h3 protein-coding 625971263 LOC116900023 eukaryotic translation initiation factor 4E-like 5 11465358 11466089 + 116900023 MODEL JAAIVD010000023 pseudo 625971264 Apln apelin ENCODES a protein that exhibits apelin receptor binding (ortholog); hormone activity (ortholog); identical protein binding (ortholog); INVOLVED IN apelin receptor signaling pathway (ortholog); coronary vasculature development (ortholog); drinking behavior (ortholog); PARTICIPATES IN apelin signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); autistic disorder (ortholog); Cardiomegaly (ortholog); FOUND IN extracellular region (ortholog); perinuclear region of cytoplasm (ortholog) X 110374695 110407158 + 22301074;30032202 116889125 MODEL JAAIVD010000014;XM_032890297;XM_032890298 XP_032746188;XP_032746189 protein-coding 625971274 Abcg1 ATP binding cassette subfamily G member 1 ENCODES a protein that exhibits ABC-type sterol transporter activity (ortholog); ADP binding (ortholog); ATP binding (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); cellular response to high density lipoprotein particle stimulus (ortholog); cholesterol efflux (ortholog); ASSOCIATED WITH atherosclerosis (ortholog); Colorectal Neoplasms (ortholog); end stage renal disease (ortholog); FOUND IN endosome (ortholog); external side of plasma membrane (ortholog); Golgi apparatus (ortholog) 18 2769022 2824647 - 22301074;30032202 116887020 MODEL JAAIVD010000013;XM_032888507 XP_032744398 ATP-binding cassette sub-family G member 1 protein-coding 625971293 LOC116907117 heat shock protein HSP 90-alpha-like 8 81832804 81834979 - 116907117 MODEL JAAIVD010000027;XR_004388806 pseudo 625971296 Ccdc178 coiled-coil domain containing 178 INVOLVED IN manchette assembly (ortholog); spermatid development (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog) 15 21555674 21905415 + 116884857 MODEL JAAIVD010000010;XM_032886100 XP_032741991 coiled-coil domain-containing protein 178 protein-coding 625971319 Ddn dendrin ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) 1 271626326 271630351 - 30032202 116884845 MODEL JAAIVD010000025;XM_032886087 XP_032741978 protein-coding 625971325 Gpr37 G protein-coupled receptor 37 ENCODES a protein that exhibits G protein-coupled peptide receptor activity (ortholog); heat shock protein binding (ortholog); Hsp70 protein binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cellular response to reactive oxygen species (ortholog); dendrite development (ortholog); ASSOCIATED WITH Lewy body dementia (ortholog); malignant mesothelioma (ortholog); Parkinson's disease (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) 6 114036346 114058252 - 30032202 116904030 MODEL JAAIVD010000024;XM_032906860 XP_032762751 prosaposin receptor GPR37 protein-coding 625971331 LOC116907488 glutamate receptor 4-like 8 1104126 1261726 - 116907488 MODEL JAAIVD010000027;XM_032910479;XM_032910480;XM_032910481 XP_032766370;XP_032766371;XP_032766372 protein-coding 625971350 Kcnab2 potassium voltage-gated channel subfamily A regulatory beta subunit 2 ENCODES a protein that exhibits alcohol dehydrogenase (NADP+) activity (ortholog); potassium channel regulator activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); myoblast differentiation (ortholog); neuromuscular process (ortholog); ASSOCIATED WITH chromosome 1p36 deletion syndrome (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); axon terminus (ortholog) 1 8264059 8352622 + 22301074;30032202 116892203 MODEL JAAIVD010000025;XM_032893749;XM_032893759;XM_032893768 XP_032749640;XP_032749650;XP_032749659 voltage-gated potassium channel subunit beta-2 protein-coding 625971376 LOC116884021 D-3-phosphoglycerate dehydrogenase-like 14 56380941 56382596 + 116884021 MODEL JAAIVD010000009 pseudo 625971377 LOC116899674 ATP synthase F(0) complex subunit C1, mitochondrial-like 1 31132732 31133142 - 22301074;30032202 116899674 MODEL JAAIVD010000025;XM_032901863 XP_032757754 protein-coding 625971380 LOC116914266 U6 snRNA-associated Sm-like protein LSm3 13 31641200 31641505 + 116914266 MODEL JAAIVD010000008 pseudo 625971381 Ginm1 glycosylated integral membrane protein 1 2 229258213 229275200 + 116893037 MODEL JAAIVD010000001;XM_032895000;XM_032895001 XP_032750891;XP_032750892 glycoprotein integral membrane 1;glycoprotein integral membrane protein 1 protein-coding 625971395 LOC116900144 olfactory receptor 1L6-like 5 14861411 14862340 + 22301074;30032202 116900144 MODEL JAAIVD010000023;XM_032901917 XP_032757808 protein-coding 625971398 LOC116909594 uncharacterized LOC116909594 9 87234020 87239513 - 116909594 MODEL JAAIVD010000002;XR_004389084 ncrna 625971402 LOC116888272 mitochondrial 2-oxodicarboxylate carrier-like X 52268754 52269631 + 116888272 MODEL JAAIVD010000014 pseudo 625971403 Spryd7 SPRY domain containing 7 12 62861708 62886590 + 22301074 116913529 MODEL JAAIVD010000007;XM_032917727;XM_032917728 XP_032773618;XP_032773619 SPRY domain-containing protein 7 protein-coding 625971414 LOC116886130 hepatitis A virus cellular receptor 1 homolog 17 16266510 16266863 - 30032202 116886130 MODEL JAAIVD010000011;XM_032887471 XP_032743362 protein-coding 625971417 Tec tec protein tyrosine kinase ENCODES a protein that exhibits non-membrane spanning protein tyrosine kinase activity (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); integrin-mediated signaling pathway (ortholog); regulation of platelet activation (ortholog); PARTICIPATES IN erythropoietin signaling pathway; FOUND IN cell-cell junction (ortholog); cytoskeleton (ortholog); plasma membrane (ortholog) 11 29565334 29629230 - 22301074;30032202 116912242 MODEL JAAIVD010000006;XM_032916221 XP_032772112 tyrosine-protein kinase Tec protein-coding 625971439 Dmac2 distal membrane arm assembly component 2 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); FOUND IN mitochondrion (ortholog) 2 169168242 169179595 - 116892455 MODEL JAAIVD010000001;XM_032894168;XM_032894169;XM_032894170 XP_032750059;XP_032750060;XP_032750061 distal membrane arm assembly complex 2;distal membrane-arm assembly complex protein 2 protein-coding 625971455 LOC116907798 calcineurin subunit B type 1-like 8 16243478 16244002 + 116907798 MODEL JAAIVD010000027 pseudo 625971456 Slc35f4 solute carrier family 35 member F4 ENCODES a protein that exhibits choline transmembrane transporter activity (ortholog); INVOLVED IN choline transport (ortholog) 12 73527154 73774500 + 22301074 116913993 MODEL JAAIVD010000007;XM_032918268;XM_032918269 XP_032774159;XP_032774160 protein-coding 625971472 Tubb4a tubulin beta 4A class IVa ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN negative regulation of microtubule polymerization (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 9 (ortholog); BROWN SYNDROME (ortholog); cerebral palsy (ortholog); FOUND IN axoneme (ortholog); ciliary tip (ortholog); cilium (ortholog) 4 88458261 88464805 - 22301074;30032202 116899210 MODEL JAAIVD010000003;XM_032900802 XP_032756693 tubulin beta-4A chain protein-coding 625971480 LOC116910908 DNA-directed RNA polymerase I subunit RPA12-like 10 50257073 50260616 - 116910908 MODEL JAAIVD010000005 pseudo 625971481 LOC116887692 N-alpha-acetyltransferase 11-like 18 23997034 23997695 + 116887692 MODEL JAAIVD010000013 pseudo 625971482 LOC116890619 5S ribosomal RNA 1 183381443 183381561 + 116890619 MODEL JAAIVD010000025 pseudo 625971483 LOC116890275 40S ribosomal protein S8-like 1 18633896 18635455 + 116890275 MODEL JAAIVD010000025 pseudo 625971484 LOC116898202 high mobility group protein HMG-I/HMG-Y-like 4 138234399 138234811 + 116898202 MODEL JAAIVD010000003 pseudo 625971485 LOC116906888 sialin 8 72718476 72737925 - 22301074;30032202 116906888 MODEL JAAIVD010000027;XM_032909801 XP_032765692 protein-coding 625971495 LOC116897055 60S ribosomal protein L27-like 3 152575870 152576279 + 116897055 MODEL JAAIVD010000012 pseudo 625971496 Sparc secreted protein acidic and cysteine rich ENCODES a protein that exhibits calcium ion binding (ortholog); collagen binding (ortholog); extracellular matrix binding (ortholog); INVOLVED IN bone development (ortholog); cellular response to growth factor stimulus (ortholog); heart development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adrenocortical carcinoma (ortholog); Brain Injuries (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular matrix (ortholog) 9 37815104 37837029 - 22301074;30032202 116910528 MODEL JAAIVD010000002;XM_032914431 XP_032770322 protein-coding 625971510 LOC116907447 uncharacterized LOC116907447 8 112136031 112137673 + 116907447 MODEL JAAIVD010000027;XR_004388826 ncrna 625971515 LOC116891957 alpha-enolase-like 2 13762111 13770853 + 116891957 MODEL JAAIVD010000001 pseudo 625971516 C11H7orf57 chromosome 11 C7orf57 homolog 11 78110882 78123747 + 116912712 MODEL JAAIVD010000006;XM_032916839 XP_032772730 uncharacterized protein C7orf57 homolog protein-coding 625971526 LOC116894977 U1 spliceosomal RNA 2 186605139 186605301 + 116894977 MODEL JAAIVD010000001;XR_004387168 snrna 625971529 Stk3 serine/threonine kinase 3 ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN cell differentiation involved in embryonic placenta development (ortholog); central nervous system development (ortholog); endocardium development (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nucleus (ortholog) 1 208511927 208747830 - 22301074;30032202 116910502 MODEL JAAIVD010000025;XM_032914403 XP_032770294 serine/threonine-protein kinase 3 protein-coding 625971545 LOC116885564 small integral membrane protein 10-like protein 2A 16 9572912 9601016 - 116885564 MODEL JAAIVD010000004;XM_032886857 XP_032742748 protein-coding 625971551 LOC116898078 sulfotransferase 1C1 4 91070116 91116167 - 22301074;30032202 116898078 MODEL JAAIVD010000003;XM_032899469 XP_032755360 protein-coding 625971563 Pnkp polynucleotide kinase 3'-phosphatase ENCODES a protein that exhibits ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity (ortholog); polynucleotide 3'-phosphatase activity (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); double-strand break repair via nonhomologous end joining (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH ataxia-oculomotor apraxia 4 (ortholog); Charcot-Marie-Tooth disease type 2B2 (ortholog); developmental and epileptic encephalopathy 12 (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 154680158 154685484 - 22301074;30032202 116892186 MODEL JAAIVD010000001;XM_032893707;XM_032893708;XM_032893710 XP_032749598;XP_032749599;XP_032749601 bifunctional polynucleotide phosphatase/kinase protein-coding 625971592 LOC116899915 U1 spliceosomal RNA 4 50211436 50211599 - 116899915 MODEL JAAIVD010000003;XR_004387887 snrna 625971595 Ints15 integrator complex subunit 15 INVOLVED IN brain development (ortholog); eye development (ortholog); mRNA splicing, via spliceosome (ortholog); FOUND IN chromosome (ortholog); INTAC complex (ortholog); integrator complex (ortholog) 16 9828401 9842392 + 116885350 MODEL JAAIVD010000004;XM_032886625;XM_032886626 XP_032742516;XP_032742517 C16H7orf26 chromosome 16 C7orf26 homolog;uncharacterized protein C7orf26 homolog protein-coding 625971608 LOC116907342 ETS translocation variant 5-like 1 157221090 157222040 + 116907342 MODEL JAAIVD010000025 pseudo 625971609 Fhl3 four and a half LIM domains 3 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); FOUND IN nucleus (ortholog); stress fiber (ortholog); Z disc (ortholog) 1 33592379 33600026 - 30032202 116896892 MODEL JAAIVD010000025;XM_032898441;XM_032898447 XP_032754332;XP_032754338 four and a half LIM domains protein 3 protein-coding 625971622 Glis2 GLIS family zinc finger 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell differentiation involved in kidney development (ortholog); hematopoietic stem cell homeostasis (ortholog); kidney development (ortholog); ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); kidney disease (ortholog); nephronophthisis (ortholog); FOUND IN cytoplasm (ortholog); non-motile cilium (ortholog); nuclear speck (ortholog) 9 17275842 17296120 - 30032202 116909687 MODEL JAAIVD010000002;XM_032913348 XP_032769239 zinc finger protein GLIS2 protein-coding 625971633 LOC116910443 olfactory receptor 1D2-like 9 33707173 33708115 + 116910443 MODEL JAAIVD010000002 pseudo 625971634 Cntn3 contactin 3 INVOLVED IN neuron projection development (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); autistic disorder (ortholog) 6 44754825 45111589 + 30032202 116903457 MODEL JAAIVD010000024;XM_032906010 XP_032761901 contactin-3 protein-coding 625971661 Oplah 5-oxoprolinase, ATP-hydrolysing ENCODES a protein that exhibits identical protein binding (ortholog); PARTICIPATES IN glutathione metabolic pathway; glutathione synthase deficiency pathway; glutathionuria disease pathway; ASSOCIATED WITH 5-Oxoprolinase Deficiency (ortholog); autosomal dominant nocturnal frontal lobe epilepsy (ortholog); COVID-19 (ortholog) 1 248623276 248646870 - 30032202 116912998 MODEL JAAIVD010000025;XM_032917182;XM_032917183;XM_032917184;XM_032917185 XP_032773073;XP_032773074;XP_032773075;XP_032773076 5-oxoprolinase protein-coding 625971701 Hprt1 hypoxanthine phosphoribosyltransferase 1 ENCODES a protein that exhibits guanine phosphoribosyltransferase activity (ortholog); hypoxanthine phosphoribosyltransferase activity (ortholog); identical protein binding (ortholog); INVOLVED IN adenine metabolic process (ortholog); AMP salvage (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Experimental Diabetes Mellitus (ortholog); familial hypocalciuric hypercalcemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) X 116233737 116265544 - 22301074;30032202 116888605 MODEL JAAIVD010000014;XM_032889905 XP_032745796 hypoxanthine-guanine phosphoribosyltransferase protein-coding 625971714 Mtmr12 myotubularin related protein 12 FOUND IN cytoplasm (ortholog) 3 168818577 168888806 - 116897118 MODEL JAAIVD010000012;XM_032898763 XP_032754654 myotubularin-related protein 12 protein-coding 625971734 LOC116913948 uncharacterized LOC116913948 12 19737927 19738678 + 116913948 MODEL JAAIVD010000007;XR_004389647 ncrna 625971738 LOC116911613 phosphoenolpyruvate carboxykinase [GTP], mitochondrial-like 10 28033601 28035590 - 116911613 MODEL JAAIVD010000005 pseudo 625971739 Pip5kl1 phosphatidylinositol-4-phosphate 5-kinase like 1 ENCODES a protein that exhibits 1-phosphatidylinositol-4-phosphate 5-kinase activity (ortholog); INVOLVED IN negative regulation of cell migration (ortholog); negative regulation of mitochondrial membrane potential (ortholog); negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); FOUND IN cytosol (ortholog) 5 3059504 3068328 - 22301074 116901140 MODEL JAAIVD010000023;XM_032902745;XM_032902746;XM_032902747 XP_032758636;XP_032758637;XP_032758638 phosphatidylinositol 4-phosphate 5-kinase-like protein 1 protein-coding 625971757 Adam7 ADAM metallopeptidase domain 7 ENCODES a protein that exhibits endopeptidase activity (ortholog); INVOLVED IN epididymis development (ortholog); epithelial cell morphogenesis (ortholog); positive regulation of flagellated sperm motility (ortholog); ASSOCIATED WITH infertility (ortholog); FOUND IN apical part of cell (ortholog); cell surface (ortholog); plasma membrane (ortholog) 12 55837252 55887472 + 22301074;30032202 116913788 MODEL JAAIVD010000007;XM_032918097 XP_032773988 disintegrin and metalloproteinase domain-containing protein 7 protein-coding 625971784 LOC116897041 thioredoxin-like protein 4A 3 146231798 146743604 - 22301074;30032202 116897041 MODEL JAAIVD010000012;XM_032898661;XM_032898662 XP_032754552;XP_032754553 protein-coding 625971794 Pbdc1 polysaccharide biosynthesis domain containing 1 X 64913118 64952475 + 30032202 116889293 MODEL JAAIVD010000014;XM_032890424;XM_032890425 XP_032746315;XP_032746316 protein PBDC1 protein-coding 625971807 Phf14 PHD finger protein 14 ENCODES a protein that exhibits histone binding (ortholog); INVOLVED IN germinal center B cell differentiation (ortholog); lung alveolus development (ortholog); negative regulation of cell population proliferation (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) 6 126721827 126872461 - 30032202 116904075 MODEL JAAIVD010000024;XM_032906939 XP_032762830 protein-coding 625971829 LOC116908374 small nucleolar RNA SNORA18 8 11108601 11108731 + 116908374 MODEL JAAIVD010000027;XR_004388921 snorna 625971832 LOC116902568 small nucleolar RNA SNORA48 5 98956832 98956974 + 116902568 MODEL JAAIVD010000023;XR_004388164 snorna 625971835 LOC116885737 uncharacterized LOC116885737 16 15654277 15664547 - 116885737 MODEL JAAIVD010000004;XR_004386038 ncrna 625971840 Lcn9 lipocalin 9 ASSOCIATED WITH Ehlers-Danlos syndrome classic type 1 (ortholog) 5 11258902 11261203 - 30032202 116900084 MODEL JAAIVD010000023;XM_032901866 XP_032757757 epididymal-specific lipocalin-9 protein-coding 625971851 LOC116909454 CMRF-35-like molecule 4 9 69124585 69129187 + 30032202 116909454 MODEL JAAIVD010000002;XM_032913035;XM_032913036 XP_032768926;XP_032768927 protein-coding 625971863 LOC116893292 cold shock domain-containing protein E1-like 2 149090518 149091689 - 116893292 MODEL JAAIVD010000001 pseudo 625971864 LOC116900796 60S ribosomal protein L21-like 5 157753733 157754278 - 22301074;30032202 116900796 MODEL JAAIVD010000023;XM_032902507 XP_032758398 protein-coding 625971869 LOC116908327 U6 spliceosomal RNA 8 61337258 61337364 - 116908327 MODEL JAAIVD010000027;XR_004388884 snrna 625971872 Txnl1 thioredoxin like 1 ENCODES a protein that exhibits disulfide oxidoreductase activity (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 15 67592263 67622120 + 116884271 MODEL JAAIVD010000010;XM_032885355 XP_032741246 thioredoxin-like protein 1 protein-coding 625971884 Sarnp SAP domain containing ribonucleoprotein ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; FOUND IN nuclear speck (ortholog); nucleus (ortholog); transcription export complex (ortholog) 1 156294775 156355259 + 30032202 116906557 MODEL JAAIVD010000025;XM_032909274;XM_032909281 XP_032765165;XP_032765172 SAP domain-containing ribonucleoprotein protein-coding 625971900 LOC116910940 methionine adenosyltransferase 2 subunit beta-like 10 75326428 75327348 + 116910940 MODEL JAAIVD010000005 pseudo 625971901 LOC116914906 host cell factor C1 regulator 1-like 13 2670470 2671030 + 116914906 MODEL JAAIVD010000008 pseudo 625971902 Slc26a8 solute carrier family 26 member 8 ENCODES a protein that exhibits chloride channel activity (ortholog); oxalate transmembrane transporter activity (ortholog); sulfate transmembrane transporter activity (ortholog); INVOLVED IN chloride transport (ortholog); oxalate transport (ortholog); sulfate transmembrane transport (ortholog); ASSOCIATED WITH schizophrenia (ortholog); spermatogenic failure 3 (ortholog); FOUND IN plasma membrane (ortholog); sperm annulus (ortholog) 18 5174088 5222759 + 22301074;30032202 116887675 MODEL JAAIVD010000013;XM_032889269;XM_032889270;XM_032889271;XM_032889272;XM_032889273 XP_032745160;XP_032745161;XP_032745162;XP_032745163;XP_032745164 testis anion transporter 1 protein-coding 625971933 LOC116888039 ubiquitin-40S ribosomal protein S27a-like X 85807432 85807905 + 116888039 MODEL JAAIVD010000014 pseudo 625971934 Cpvl carboxypeptidase vitellogenic like 6 87107494 87211454 + 22301074;30032202 116902828 MODEL JAAIVD010000024;XM_032905159;XM_032905160;XM_032905161 XP_032761050;XP_032761051;XP_032761052 probable serine carboxypeptidase CPVL protein-coding 625971956 LOC116912793 elongation factor 2-like 11 9827105 9829775 + 116912793 MODEL JAAIVD010000006 pseudo 625971957 Capn15 calpain 15 ENCODES a protein that exhibits cysteine-type peptidase activity (ortholog); INVOLVED IN cell adhesion (ortholog); ASSOCIATED WITH coloboma (ortholog); OCULOGASTROINTESTINAL NEURODEVELOPMENTAL SYNDROME (ortholog) 9 3216904 3243221 - 22301074;30032202 116908844 MODEL JAAIVD010000002;XM_032912267;XM_032912268;XM_032912269;XM_032912270;XM_032912271;XM_032912273;XM_032912274;XR_004389032;XR_004389033 XP_032768158;XP_032768159;XP_032768160;XP_032768161;XP_032768162;XP_032768164;XP_032768165 calpain-15 protein-coding 625972001 LOC116883258 core histone macro-H2A.1 ENCODES a protein that exhibits ADP-D-ribose binding (ortholog); ADP-D-ribose modification-dependent protein binding (ortholog); chromatin binding (ortholog); INVOLVED IN DNA repair (ortholog); dosage compensation by inactivation of X chromosome (ortholog); epigenetic regulation of gene expression (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH myelodysplastic syndrome (ortholog); FOUND IN Barr body (ortholog); chromatin (ortholog); condensed chromosome (ortholog) 14 74405158 74441548 - 22301074;30032202 116883258 MODEL JAAIVD010000009;XM_032884253 XP_032740144 protein-coding 625972012 LOC116912791 transmembrane protease serine 11D 11 675686 733756 - 22301074 116912791 MODEL JAAIVD010000006;XM_032916953 XP_032772844 protein-coding 625972026 Nhsl1 NHS like 1 2 218354819 218487375 - 30032202 116892988 MODEL JAAIVD010000001;XM_032894947;XM_032894948 XP_032750838;XP_032750839 NHS-like protein 1 protein-coding 625972041 Rnf151 ring finger protein 151 FOUND IN nucleus (ortholog) 9 2001828 2006367 - 22301074;30032202 116909692 MODEL JAAIVD010000002;XM_032913354;XM_032913355 XP_032769245;XP_032769246 protein-coding 625972053 Smim7 small integral membrane protein 7 13 14384957 14389052 - 116914441 MODEL JAAIVD010000008;XM_032918741 XP_032774632 protein-coding 625972062 LOC116897758 keratin-associated protein 10-8-like 4 6552557 6559273 + 116897758 MODEL JAAIVD010000003;XM_032899188 XP_032755079 protein-coding 625972068 Atg16l1 autophagy related 16 like 1 ENCODES a protein that exhibits GTPase binding (ortholog); identical protein binding (ortholog); protein-membrane adaptor activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); axonal transport (ortholog); C-terminal protein lipidation (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH Cardiomegaly (ortholog); Crohn's disease (ortholog); inflammatory bowel disease (ortholog); FOUND IN Atg12-Atg5-Atg16 complex (ortholog); autophagosome (ortholog); autophagosome membrane (ortholog) 4 159870694 159906616 + 22301074;30032202 116899611 MODEL JAAIVD010000003;XM_032901567;XM_032901568;XM_032901569;XM_032901570 XP_032757458;XP_032757459;XP_032757460;XP_032757461 autophagy-related protein 16-1 protein-coding 625972096 LOC116907756 protein SET 8 3762739 3763864 + 22301074;30032202 116907756 MODEL JAAIVD010000027;XM_032910895 XP_032766786 protein-coding 625972101 LOC116912673 17-beta-hydroxysteroid dehydrogenase 13 11 14038732 14053747 - 30032202 116912673 MODEL JAAIVD010000006;XM_032916790 XP_032772681 protein-coding 625972112 Hoxd9 homeobox D9 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN adult locomotory behavior (ortholog); anterior/posterior pattern specification (ortholog); embryonic forelimb morphogenesis (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); hepatocellular carcinoma (ortholog); mucinous adenocarcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 5 52039476 52041659 + 22301074;30032202 116900211 MODEL JAAIVD010000023;XM_032901966 XP_032757857 homeobox protein Hox-D9 protein-coding 625972118 Tmem179b transmembrane protein 179B FOUND IN nuclear speck (ortholog) 2 9168856 9171212 + 116890929 MODEL JAAIVD010000001;XM_032891572 XP_032747463 protein-coding 625972127 LOC116908002 uncharacterized LOC116908002 8 113776576 113795724 + 116908002 MODEL JAAIVD010000027;XR_004388867 ncrna 625972133 Stx1b syntaxin 1B ENCODES a protein that exhibits protein carrier activity (ortholog); protein domain specific binding (ortholog); protein kinase binding (ortholog); INVOLVED IN calcium ion-regulated exocytosis of neurotransmitter (ortholog); negative regulation of synaptic vesicle recycling (ortholog); positive regulation of excitatory postsynaptic potential (ortholog); ASSOCIATED WITH Duchenne muscular dystrophy (ortholog); epilepsy (ortholog); Febrile Seizures (ortholog); FOUND IN axon (ortholog); centrosome (ortholog); cytoplasm (ortholog) 2 74081584 74097853 + 22301074;30032202 116891459 MODEL JAAIVD010000001;XM_032892539 XP_032748430 syntaxin-1B protein-coding 625972147 Fgf17 fibroblast growth factor 17 ENCODES a protein that exhibits type 1 fibroblast growth factor receptor binding (ortholog); type 2 fibroblast growth factor receptor binding (ortholog); INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); positive regulation of cell population proliferation (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH hypogonadotropic hypogonadism 20 with or without anosmia (ortholog); hypogonadotropic hypogonadism 7 with or without anosmia (ortholog) 12 53711494 53716553 + 22301074;30032202 116913371 MODEL JAAIVD010000007;XM_032917540;XM_032917541 XP_032773431;XP_032773432 protein-coding 625972157 LOC116891089 uncharacterized LOC116891089 2 32142235 32145540 - 116891089 MODEL JAAIVD010000001;XR_004386815 ncrna 625972162 LOC116902881 anionic trypsin-2-like 6 99170197 99173313 - 22301074;30032202 116902881 MODEL JAAIVD010000024;XM_032905211 XP_032761102 protein-coding 625972169 Mrpl4 mitochondrial ribosomal protein L4 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 8 17265448 17271414 + 22301074;30032202 116907410 MODEL JAAIVD010000027;XM_032910368 XP_032766259 39S ribosomal protein L4, mitochondrial protein-coding 625972182 S100a4 S100 calcium binding protein A4 ENCODES a protein that exhibits actin binding (ortholog); calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Colonic Neoplasms (ortholog); intracranial vasospasm (ortholog); FOUND IN extracellular region (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 3 63011177 63013621 - 22301074;30032202 116896595 MODEL JAAIVD010000012;XM_032897836;XM_032897838 XP_032753727;XP_032753729 protein S100-A4 protein-coding 625972192 LOC116900561 olfactory receptor 4F3/4F16/4F29-like 5 90070067 90071009 - 116900561 MODEL JAAIVD010000023 pseudo 625972193 LOC116913387 non-histone chromosomal protein HMG-14-like 12 71823419 71823723 - 116913387 MODEL JAAIVD010000007 pseudo 625972194 LOC116900465 olfactory receptor 4A47-like 5 71316005 71316894 - 116900465 MODEL JAAIVD010000023 pseudo 625972195 Mcur1 mitochondrial calcium uniporter regulator 1 ENCODES a protein that exhibits protein-containing complex binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN calcium import into the mitochondrion (ortholog); calcium ion import (ortholog); calcium ion transmembrane transport (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 14 62549795 62565505 - 30032202 116883730 MODEL JAAIVD010000009;XM_032884964 XP_032740855 protein-coding 625972208 LOC116909311 thyroid hormone receptor-associated protein 3-like 9 21396009 21401159 - 116909311 MODEL JAAIVD010000002 pseudo 625972209 LOC116897542 small nucleolar RNA SNORA17 3 65968602 65968728 + 116897542 MODEL JAAIVD010000012;XR_004387556 snorna 625972212 Naa80 N-alpha-acetyltransferase 80, NatH catalytic subunit ENCODES a protein that exhibits acetyl-CoA binding (ortholog); N-acetyltransferase activity (ortholog); protein-N-terminal amino-acid acetyltransferase activity (ortholog); INVOLVED IN actin modification (ortholog); N-terminal peptidyl-aspartic acid acetylation (ortholog); N-terminal peptidyl-glutamic acid acetylation (ortholog); ASSOCIATED WITH AURONEURODENTAL SYNDROME (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 8 98898060 98901300 + 30032202 116907533 MODEL JAAIVD010000027;XM_032910550;XM_032910551 XP_032766441;XP_032766442 N-alpha-acetyltransferase 80 protein-coding 625972222 LOC116890049 translationally-controlled tumor protein-like 1 207655994 207656653 + 116890049 MODEL JAAIVD010000025;XR_004386524 pseudo 625972225 LOC116887231 uncharacterized LOC116887231 18 19835236 19838067 - 116887231 MODEL JAAIVD010000013;XR_004386205 ncrna 625972229 LOC116890564 small nucleolar RNA SNORA17 1 120943234 120943363 - 116890564 MODEL JAAIVD010000025;XR_004386734 snorna 625972232 LOC116886357 glyceraldehyde-3-phosphate dehydrogenase-like 1 14713385 14713810 + 116886357 MODEL JAAIVD010000025 pseudo 625972233 LOC116897959 40S ribosomal protein S2-like 4 45640440 45641309 - 116897959 MODEL JAAIVD010000003 pseudo 625972234 Adamts15 ADAM metallopeptidase with thrombospondin type 1 motif 15 ENCODES a protein that exhibits endopeptidase activity (ortholog); extracellular matrix binding (ortholog); heparin binding (ortholog); INVOLVED IN extracellular matrix disassembly (ortholog); myoblast fusion (ortholog); ASSOCIATED WITH Distal Arthrogryposis Type 12 (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog) 8 26613687 26638109 - 22301074;30032202 116907060 MODEL JAAIVD010000027;XM_032910017 XP_032765908 A disintegrin and metalloproteinase with thrombospondin motifs 15 protein-coding 625972246 LOC116899949 U2 spliceosomal RNA 4 106487815 106487971 + 116899949 MODEL JAAIVD010000003 pseudo 625972247 LOC116900972 uncharacterized LOC116900972 5 107799584 107833899 - 22301074;30032202 116900972 MODEL JAAIVD010000023;XM_032902602 XP_032758493 uncharacterized protein LOC116900972 protein-coding 625972258 Tifa TRAF interacting protein with forkhead associated domain INVOLVED IN cytoplasmic pattern recognition receptor signaling pathway (ortholog); innate immune response (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); FOUND IN cytoplasm (ortholog) 3 31544766 31554116 - 22301074;30032202 116896272 MODEL JAAIVD010000012;XM_032897351;XM_032897352;XM_032897353;XR_004387321 XP_032753242;XP_032753243;XP_032753244 TRAF-interacting protein with FHA domain-containing protein A protein-coding 625972274 Flna filamin A ENCODES a protein that exhibits actin filament binding (ortholog); DNA-binding transcription factor binding (ortholog); Fc-gamma receptor I complex binding (ortholog); INVOLVED IN actin crosslink formation (ortholog); actin cytoskeleton organization (ortholog); adenylate cyclase-inhibiting dopamine receptor signaling pathway (ortholog); PARTICIPATES IN calcium signaling pathway via the calcium-sensing receptor; integrin mediated signaling pathway; Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH Aneurysm (ortholog); aortic aneurysm (ortholog); Arterial Thrombosis (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); actin filament bundle (ortholog) X 128227804 128254382 - 30032202 116888337 MODEL JAAIVD010000014;XM_032889607 XP_032745498 filamin-A protein-coding 625972326 LOC116900406 olfactory receptor 4P4-like 5 70161525 70162466 + 22301074 116900406 MODEL JAAIVD010000023;XM_032902152 XP_032758043 protein-coding 625972329 Caprin1 cell cycle associated protein 1 ENCODES a protein that exhibits ATP binding (ortholog); molecular condensate scaffold activity (ortholog); molecular function activator activity (ortholog); INVOLVED IN generation of neurons (ortholog); intracellular mRNA localization (ortholog); membraneless organelle assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); cerebellar ataxia (ortholog); FOUND IN cell leading edge (ortholog); cytoplasm (ortholog); cytoplasmic stress granule (ortholog) 5 81595899 81627574 - 30032202 116901689 MODEL JAAIVD010000023;XM_032903815 XP_032759706 caprin-1 protein-coding 625972352 LOC116913412 ubiquitin-40S ribosomal protein S27a-like 12 46549634 46550134 - 116913412 MODEL JAAIVD010000007 pseudo 625972353 LOC116887594 proteasome subunit alpha type-6-like 18 15121741 15122474 + 116887594 MODEL JAAIVD010000013 pseudo 625972354 LOC116884585 voltage-dependent anion-selective channel protein 1-like 15 14473205 14474086 - 22301074;30032202 116884585 MODEL JAAIVD010000010;XM_032885726 XP_032741617 protein-coding 625972359 Klf2 KLF transcription factor 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell morphogenesis (ortholog); cellular response to endothelin (ortholog); cellular response to fluid shear stress (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); COVID-19 (ortholog); lung disease (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) 13 14142957 14145368 + 30032202 116914806 MODEL JAAIVD010000008;XM_032919260 XP_032775151 Krueppel-like factor 2;Kruppel like factor 2 protein-coding 625972366 Exoc3l2 exocyst complex component 3 like 2 INVOLVED IN in utero embryonic development (ortholog); ASSOCIATED WITH BRAIN MALFORMATION RENAL SYNDROME (ortholog); Meckel syndrome (ortholog) 2 171129925 171154803 - 22301074;30032202 116894494 MODEL JAAIVD010000001;XM_032896204 XP_032752095 exocyst complex component 3-like protein 2 protein-coding 625972380 LOC116908370 U1 spliceosomal RNA 8 33945551 33945692 - 116908370 MODEL JAAIVD010000027 pseudo 625972381 LOC116914025 cyclin-dependent kinase 4-like 12 33534662 33535321 - 116914025 MODEL JAAIVD010000007 pseudo 625972382 LOC116890786 achaete-scute homolog 2-like 2 6733733 6735445 + 116890786 MODEL JAAIVD010000001 pseudo 625972383 LOC116894600 vomeronasal type-2 receptor 116-like 2 181745006 181761418 + 22301074;30032202 116894600 MODEL JAAIVD010000001;XM_032896317 XP_032752208 protein-coding 625972391 LOC116899880 small nucleolar RNA SNORA17 4 160437206 160437327 + 116899880 MODEL JAAIVD010000003 pseudo 625972392 LOC116885901 uncharacterized LOC116885901 16 14815160 14818491 - 116885901 MODEL JAAIVD010000004;XR_004386047 ncrna 625972397 LOC116904123 lanosterol 14-alpha demethylase ENCODES a protein that exhibits heme binding (ortholog); sterol 14-demethylase activity (ortholog); INVOLVED IN cholesterol biosynthetic process via 24,25-dihydrolanosterol (ortholog); negative regulation of amyloid-beta clearance (ortholog); negative regulation of protein catabolic process (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH Antley-Bixler syndrome (ortholog); cataract (ortholog); diabetes mellitus (ortholog); FOUND IN acrosomal vesicle (ortholog) 6 136371225 136389383 - 22301074 116904123 MODEL JAAIVD010000024;XM_032907008 XP_032762899 protein-coding 625972411 Pdss2 decaprenyl diphosphate synthase subunit 2 ENCODES a protein that exhibits all-trans-decaprenyl-diphosphate synthase activity (ortholog); all-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific) activity (ortholog); prenyltransferase activity (ortholog); INVOLVED IN cerebellum development (ortholog); isoprenoid biosynthetic process (ortholog); regulation of body fluid levels (ortholog); ASSOCIATED WITH coenzyme Q10 deficiency disease (ortholog); focal segmental glomerulosclerosis (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); heterotetrameric polyprenyl diphosphate synthase complex (ortholog); mitochondrial matrix (ortholog) 18 42929871 43153160 + 22301074;30032202 116887016 MODEL JAAIVD010000013;XM_032888504 XP_032744395 decaprenyl-diphosphate synthase subunit 2 protein-coding 625972423 LOC116914962 TSC22 domain family protein 1-like 13 14535780 14536092 + 116914962 MODEL JAAIVD010000008 pseudo 625972424 LOC116896781 uncharacterized LOC116896781 3 80102840 80142585 - 116896781 MODEL JAAIVD010000012;XR_004387367 ncrna 625972429 LOC116910989 zinc finger protein 431-like 1 215421893 215467880 + 30032202 116910989 MODEL JAAIVD010000025;XM_032914704;XM_032914711;XM_032914723;XR_004389293 XP_032770595;XP_032770602;XP_032770614 protein-coding 625972450 LOC116907119 uncharacterized LOC116907119 8 104053040 104056730 - 116907119 MODEL JAAIVD010000027;XR_004388807 ncrna 625972454 Ndufb2 NADH:ubiquinone oxidoreductase subunit B2 FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) 6 100198405 100205302 - 22301074;30032202 116903925 MODEL JAAIVD010000024;XM_032906697 XP_032762588 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial protein-coding 625972462 Clns1a chloride nucleotide-sensitive channel 1A ENCODES a protein that exhibits intracellularly calcium-gated chloride channel activity (ortholog); lipid binding (ortholog); potassium channel activity (ortholog); INVOLVED IN cell volume homeostasis (ortholog); chloride transport (ortholog); spliceosomal snRNP assembly (ortholog); ASSOCIATED WITH melanoma (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); methylosome (ortholog) 2 96022627 96044629 + 22301074;30032202 116891705 MODEL D17698;JAAIVD010000001;XM_032892969;XM_032892970 BAA04561;XP_032748860;XP_032748861 methylosome subunit pICln protein-coding 625972475 Esr2 estrogen receptor 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); enzyme binding (ortholog); INVOLVED IN amygdala development (ortholog); behavioral fear response (ortholog); brain development (ortholog); PARTICIPATES IN bisphenol A response pathway; estrogen signaling pathway; tamoxifen pharmacodynamics pathway; ASSOCIATED WITH adenocarcinoma (ortholog); adenoma (ortholog); alopecia (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); neuronal cell body (ortholog) 7 90294602 90345780 - 22301074 116905784 MODEL JAAIVD010000026;XM_032908758;XM_032908759;XM_032908760;XM_032908761;XM_032908762 XP_032764649;XP_032764650;XP_032764651;XP_032764652;XP_032764653 estrogen receptor beta protein-coding 625972498 LOC116895694 elongation factor 1-alpha 1-like 3 206751105 206752583 + 116895694 MODEL JAAIVD010000012;XR_004387302 pseudo 625972501 Tm6sf1 transmembrane 6 superfamily member 1 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN lysosomal membrane (ortholog) 2 118391738 118419472 - 30032202 116891893 MODEL JAAIVD010000001;XM_032893306;XM_032893307;XM_032893308;XM_032893309 XP_032749197;XP_032749198;XP_032749199;XP_032749200 protein-coding 625972522 LOC116910321 ras-related protein Rab-11A-like 9 54636522 54643931 - 116910321 MODEL JAAIVD010000002 pseudo 625972523 Tmcc3 transmembrane and coiled-coil domain family 3 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); identical protein binding (ortholog); ASSOCIATED WITH myoepithelioma (ortholog); FOUND IN endoplasmic reticulum (ortholog) 1 173687081 173757895 + 30032202 116908320 MODEL JAAIVD010000025;XM_032911612 XP_032767503 transmembrane and coiled-coil domain protein 3 protein-coding 625972531 LOC116914105 small nucleolar RNA SNORA25 12 87252715 87252843 - 116914105 MODEL JAAIVD010000007;XR_004389672 snorna 625972534 Micalcl MICAL C-terminal like 2 89077496 89116673 - 116891648 MODEL JAAIVD010000001;XM_032892889;XM_032892890 XP_032748780;XP_032748781 MICAL C-terminal-like protein protein-coding 625972551 LOC116896626 protein argonaute-3 1 31876582 31945574 + 22301074 116896626 MODEL JAAIVD010000025;XM_032897913 XP_032753804 protein-coding 625972574 Hycc1 hyccin PI4KA lipid kinase complex subunit 1 INVOLVED IN myelination (ortholog); phosphatidylinositol phosphate biosynthetic process (ortholog); protein localization to plasma membrane (ortholog); ASSOCIATED WITH genetic disease (ortholog); hypomyelinating leukodystrophy 5 (ortholog); intellectual disability (ortholog); FOUND IN cytosol (ortholog); neuron projection (ortholog); plasma membrane (ortholog) 6 153177957 153239041 - 30032202 116904196 MODEL JAAIVD010000024;XM_032907108;XM_032907109 XP_032762999;XP_032763000 Fam126a family with sequence similarity 126 member A;hyccin protein-coding 625972593 Ccm2l CCM2 like scaffold protein INVOLVED IN cardiac atrium morphogenesis (ortholog); cardiac muscle tissue growth (ortholog); negative regulation of homotypic cell-cell adhesion (ortholog) 5 132384750 132400113 + 30032202 116902134 MODEL JAAIVD010000023;XM_032904461;XM_032904462 XP_032760352;XP_032760353 cerebral cavernous malformations 2 protein-like protein-coding 625972609 LOC116906325 U6 spliceosomal RNA 7 16700445 16700550 - 116906325 MODEL JAAIVD010000026;XR_004388612 snrna 625972612 Suds3 SIN3A corepressor complex component SDS3 ENCODES a protein that exhibits enzyme binding (ortholog); histone deacetylase activity (ortholog); histone deacetylase binding (ortholog); INVOLVED IN blastocyst hatching (ortholog); chromatin remodeling (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN nuclear body (ortholog); nucleus (ortholog); Sin3-type complex (ortholog) 16 36712846 36735849 + 30032202 116885301 MODEL JAAIVD010000004;XM_032886551 XP_032742442 SDS3 homolog, SIN3A corepressor complex component;sin3 histone deacetylase corepressor complex component SDS3 protein-coding 625972629 LOC116886725 small nucleolar RNA SNORA46 17 2564644 2564778 - 116886725 MODEL JAAIVD010000011;XR_004386137 snorna 625972632 Ccser1 coiled-coil serine rich protein 1 INVOLVED IN bone development (ortholog); osteoclast differentiation (ortholog); protein activation cascade (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); amenorrhea (ortholog); cocaine dependence (ortholog) 6 80284967 81607510 - 116903720 MODEL JAAIVD010000024;XM_032906396;XM_032906397 XP_032762287;XP_032762288 serine-rich coiled-coil domain-containing protein 1 protein-coding 625972649 LOC116885089 U6 spliceosomal RNA 15 6630860 6630962 - 116885089 MODEL JAAIVD010000010;XR_004385960 snrna 625972652 S1pr5 sphingosine-1-phosphate receptor 5 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN regulation of neuron differentiation (ortholog); PARTICIPATES IN sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); Experimental Diabetes Mellitus (ortholog); systemic scleroderma (ortholog); FOUND IN presynapse (ortholog) 8 17509974 17512043 - 22301074 116907664 MODEL JAAIVD010000027;XM_032910755 XP_032766646 sphingosine 1-phosphate receptor 5 protein-coding 625972657 Vps35l VPS35 endosomal protein sorting factor like INVOLVED IN endocytic recycling (ortholog); Golgi to plasma membrane transport (ortholog); ASSOCIATED WITH Ritscher-Schinzel syndrome (ortholog); Ritscher-Schinzel Syndrome 3 (ortholog); FOUND IN endosome (ortholog); protein-containing complex (ortholog) 2 82802922 82906530 - 30032202 116891605 MODEL JAAIVD010000001;XM_032892802 XP_032748693 VPS35 endosomal protein sorting factor-like protein-coding 625972692 Nsg2 neuronal vesicle trafficking associated 2 INVOLVED IN regulation of postsynaptic membrane neurotransmitter receptor levels (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); dendrite (ortholog); early endosome (ortholog) 9 3867676 3933572 - 22301074;30032202 116908752 MODEL JAAIVD010000002;XM_032912104 XP_032767995 neuronal vesicle trafficking-associated protein 2 protein-coding 625972701 Nipal4 NIPA like domain containing 4 INVOLVED IN magnesium ion transport (ortholog); ASSOCIATED WITH autosomal recessive congenital ichthyosis (ortholog); autosomal recessive congenital ichthyosis 6 (ortholog); erythrokeratodermia variabilis et progressiva 1 (ortholog) 9 28869441 28886569 - 22301074;30032202 116909923 MODEL JAAIVD010000002;XM_032913688 XP_032769579 magnesium transporter NIPA4 protein-coding 625972711 LOC116894289 thymosin beta-10-like 2 132443782 132443955 + 22301074;30032202 116894289 MODEL JAAIVD010000001;XM_032895996 XP_032751887 protein-coding 625972715 Ccp110 centriolar coiled-coil protein 110 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN centriole replication (ortholog); centrosome duplication (ortholog); ciliary basal body organization (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); microtubule organizing center (ortholog) 2 82909621 82933497 - 30032202 116891606 MODEL JAAIVD010000001;XM_032892803;XM_032892804;XM_032892805 XP_032748694;XP_032748695;XP_032748696 centriolar coiled-coil protein of 110 kDa protein-coding 625972741 LOC116901072 bcl-2-associated transcription factor 1-like 5 142723124 142758055 + 116901072 MODEL JAAIVD010000023 pseudo 625972742 Ten1 TEN1 subunit of CST complex ENCODES a protein that exhibits telomeric repeat DNA binding (ortholog); INVOLVED IN negative regulation of telomere maintenance via telomerase (ortholog); ASSOCIATED WITH dyskeratosis congenita (ortholog); FOUND IN chromosome, telomeric region (ortholog); CST complex (ortholog); nucleoplasm (ortholog) 9 67850275 67866509 - 22301074;30032202 116908523 MODEL JAAIVD010000002;XM_032911699 XP_032767590 CST complex subunit TEN1 protein-coding 625972750 LOC116903293 uncharacterized LOC116903293 6 23350549 23351845 + 116903293 MODEL JAAIVD010000024;XM_032905714 XP_032761605 uncharacterized protein LOC116903293 protein-coding 625972755 Lmod3 leiomodin 3 ENCODES a protein that exhibits actin monomer binding (ortholog); tropomyosin binding (ortholog); INVOLVED IN actin nucleation (ortholog); positive regulation of skeletal muscle fiber development (ortholog); skeletal muscle fiber development (ortholog); ASSOCIATED WITH genetic disease (ortholog); nemaline myopathy 10 (ortholog); FOUND IN A band (ortholog); cytoplasm (ortholog); M band (ortholog) 6 49787132 49801175 + 22301074;30032202 116902712 MODEL JAAIVD010000024;XM_032905068 XP_032760959 leiomodin-3 protein-coding 625972762 Sumo2 small ubiquitin like modifier 2 ENCODES a protein that exhibits nuclear retinoid X receptor binding (ortholog); SUMO transferase activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN intracellular protein localization (ortholog); negative regulation of DNA-templated transcription (ortholog); positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog) 9 68557765 68570307 + 30032202 116909329 MODEL JAAIVD010000002;XM_032912869 XP_032768760 small ubiquitin-related modifier 2 protein-coding 625972770 LOC116905265 glyceraldehyde-3-phosphate dehydrogenase-like 7 98395193 98396282 + 116905265 MODEL JAAIVD010000026 pseudo 625972771 Snrpc small nuclear ribonucleoprotein polypeptide C ENCODES a protein that exhibits protein homodimerization activity (ortholog); single-stranded RNA binding (ortholog); U1 snRNA binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH connective tissue disease (ortholog); mixed connective tissue disease (ortholog); systemic lupus erythematosus (ortholog); FOUND IN Cajal body (ortholog); nucleoplasm (ortholog); U1 snRNP (ortholog) 18 6004676 6016262 - 22301074;30032202 116887337 MODEL JAAIVD010000013;XM_032888929 XP_032744820 U1 small nuclear ribonucleoprotein C protein-coding 625972781 Il17c interleukin 17C ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN neutrophil differentiation (ortholog); positive regulation of cytokine production involved in inflammatory response (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); Mycoplasma pneumoniae pneumonia (ortholog); FOUND IN extracellular region (ortholog) 17 42061371 42062664 + 22301074 116886686 MODEL JAAIVD010000011;XM_032888179 XP_032744070 interleukin-17C protein-coding 625972787 LOC116892771 60S ribosomal protein L13-like 2 183059760 183060344 - 22301074;30032202 116892771 MODEL JAAIVD010000001;XM_032894647;XM_032894648 XP_032750538;XP_032750539 protein-coding 625972793 Oprk1 opioid receptor kappa 1 ENCODES a protein that exhibits dynorphin receptor activity (ortholog); G protein-coupled opioid receptor activity (ortholog); receptor serine/threonine kinase binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting opioid receptor signaling pathway (ortholog); behavioral response to cocaine (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN nalbuphine pharmacodynamics pathway; ASSOCIATED WITH alcohol dependence (ortholog); Alcohol-Related Disorders (ortholog); Binge Drinking (ortholog); FOUND IN axon terminus (ortholog); dendrite (ortholog); membrane (ortholog) 1 140878397 140894005 + 22301074;30032202 116903757 MODEL JAAIVD010000025;XM_032906449 XP_032762340 kappa-type opioid receptor protein-coding 625972801 LOC116895583 tropomyosin beta chain-like 3 142936483 142937275 - 116895583 MODEL JAAIVD010000012 pseudo 625972802 Pax3 paired box 3 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); HMG box domain binding (ortholog); INVOLVED IN cell migration (ortholog); cell population proliferation (ortholog); developmental pigmentation (ortholog); ASSOCIATED WITH alveolar rhabdomyosarcoma (ortholog); brain stem glioma (ortholog); congenital diaphragmatic hernia (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 4 151317944 151412926 - 22301074;30032202 116898236 MODEL JAAIVD010000003;XM_032899588 XP_032755479 paired box protein Pax-3 protein-coding 625972814 Ift122 intraflagellar transport 122 ENCODES a protein that exhibits protein carrier activity (ortholog); INVOLVED IN camera-type eye morphogenesis (ortholog); cilium assembly (ortholog); dorsal/ventral pattern formation (ortholog); ASSOCIATED WITH Cardiac Edema (ortholog); Ciliary Motility Disorders (ortholog); cone-rod dystrophy (ortholog); FOUND IN ciliary basal body (ortholog); ciliary base (ortholog); ciliary transition zone (ortholog) 6 30803368 30871733 - 22301074;30032202 116903374 MODEL JAAIVD010000024;XM_032905861;XM_032905862;XM_032905863 XP_032761752;XP_032761753;XP_032761754 intraflagellar transport protein 122 homolog protein-coding 625972853 Kif1c kinesin family member 1C INVOLVED IN anterograde neuronal dense core vesicle transport (ortholog); retrograde neuronal dense core vesicle transport (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); ASSOCIATED WITH cerebellar ataxia (ortholog); genetic disease (ortholog); hereditary spastic paraplegia (ortholog); FOUND IN Golgi apparatus (ortholog) 9 50310674 50340545 + 22301074 116909535 MODEL JAAIVD010000002;XM_032913148;XM_032913149;XM_032913150 XP_032769039;XP_032769040;XP_032769041 kinesin-like protein KIF1C protein-coding 625972885 Ndufs1 NADH:ubiquinone oxidoreductase core subunit S1 ENCODES a protein that exhibits electron transfer activity (ortholog); NADH dehydrogenase (ubiquinone) activity (ortholog); INVOLVED IN cellular respiration (ortholog); mitochondrial electron transport, NADH to ubiquinone (ortholog); mitochondrial respiratory chain complex I assembly (ortholog); ASSOCIATED WITH cystic fibrosis (ortholog); Disease Progression (ortholog); genetic disease (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) 4 137131240 137164898 - 22301074 116899444 MODEL JAAIVD010000003;XM_032901215 XP_032757106 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial protein-coding 625972908 Mif macrophage migration inhibitory factor ENCODES a protein that exhibits chemoattractant activity (ortholog); cytokine activity (ortholog); cytokine receptor binding (ortholog); INVOLVED IN brain renin-angiotensin system (ortholog); cell surface receptor signaling pathway (ortholog); cellular response to hydrogen peroxide (ortholog); PARTICIPATES IN alkaptonuria pathway; disulfiram pharmacodynamics pathway; dopamine beta-hydroxylase deficiency pathway; ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); alcohol-associated liver disease (ortholog); allergic disease (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); cytosol (ortholog) 18 11580563 11581554 + 30032202 116886822 MODEL JAAIVD010000013;XM_032888255 XP_032744146 protein-coding 625972915 Rnf223 ring finger protein 223 1 4525682 4527399 - 30032202 116891668 MODEL JAAIVD010000025;XM_032892926 XP_032748817 protein-coding 625972920 Adgrg2 adhesion G protein-coupled receptor G2 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); spermatid development (ortholog); ASSOCIATED WITH autosomal recessive congenital bilateral absence of vas deferens (ortholog); congenital bilateral absence of vas deferens (ortholog); genetic disease (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog) X 31783766 31847031 + 22301074;30032202 116888301 MODEL JAAIVD010000014;XM_032889575 XP_032745466 adhesion G-protein coupled receptor G2 protein-coding 625972949 LOC116911171 olfactory receptor 6C3-like 1 162080766 162085574 + 22301074;30032202 116911171 MODEL JAAIVD010000025;XM_032915073 XP_032770964 protein-coding 625972953 Tanc2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 ENCODES a protein that exhibits structural constituent of postsynaptic density (ortholog); INVOLVED IN dense core granule cytoskeletal transport (ortholog); in utero embryonic development (ortholog); regulation of dendritic spine development (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Developmental Disabilities (ortholog); epilepsy (ortholog); FOUND IN dendritic spine (ortholog); glutamatergic synapse (ortholog); postsynaptic density (ortholog) 9 73182253 73507608 - 22301074;30032202 116910410 MODEL JAAIVD010000002;XM_032914252;XM_032914253;XM_032914254;XM_032914255;XM_032914256;XM_032914257;XM_032914258 XP_032770143;XP_032770144;XP_032770145;XP_032770146;XP_032770147;XP_032770148;XP_032770149 protein TANC2 protein-coding 625972994 LOC116887423 rano class II histocompatibility antigen, B-1 beta chain 18 7985256 7990642 - 22301074;30032202 116887423 MODEL JAAIVD010000013;XM_032889039 XP_032744930 protein-coding 625973004 Usp16 ubiquitin specific peptidase 16 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); cysteine-type endopeptidase activity (ortholog); histone binding (ortholog); INVOLVED IN DNA damage response (ortholog); monoubiquitinated protein deubiquitination (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; histone modification pathway; FOUND IN cytoplasm (ortholog); nucleus (ortholog) 4 56378761 56406884 - 22301074;30032202 116899028 MODEL JAAIVD010000003;XM_032900479;XM_032900481;XR_004387682 XP_032756370;XP_032756372 ubiquitin carboxyl-terminal hydrolase 16 protein-coding 625973030 LOC116895093 small nucleolar RNA U13 2 12885919 12886021 - 116895093 MODEL JAAIVD010000001;XR_004387257 snorna 625973033 Atg4c autophagy related 4C cysteine peptidase ENCODES a protein that exhibits cysteine-type endopeptidase activity (ortholog); cysteine-type peptidase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); protein delipidation (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH Crohn's disease (ortholog); intellectual disability (ortholog) 1 55261444 55333988 - 22301074 116899877 MODEL JAAIVD010000025;XM_032901783;XM_032901784;XM_032901785;XM_032901786 XP_032757674;XP_032757675;XP_032757676;XP_032757677 cysteine protease ATG4C protein-coding 625973058 LOC116900920 Ig kappa chain V-II region 26-10-like 5 78927211 78928032 - 116900920 MODEL JAAIVD010000023 pseudo 625973059 E2f4 E2F transcription factor 4 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); blood circulation (ortholog); cell volume homeostasis (ortholog); ASSOCIATED WITH Disease Progression (ortholog); Lynch syndrome (ortholog); otitis media (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 17 25024047 25031485 + 22301074;30032202 116886372 MODEL JAAIVD010000011;XM_032887835;XM_032887836 XP_032743726;XP_032743727 transcription factor E2F4 protein-coding 625973077 Cars1 cysteinyl-tRNA synthetase 1 ENCODES a protein that exhibits ATP binding (ortholog); cysteine-tRNA ligase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cysteinyl-tRNA aminoacylation (ortholog); PARTICIPATES IN cysteine metabolic pathway; mercaptolactate-cysteine disulfiduria pathway; ocular nonnephropathic cystinosis pathway; ASSOCIATED WITH MICROCEPHALY, DEVELOPMENTAL DELAY, AND BRITTLE HAIR SYNDROME (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 2 6100884 6142589 + 22301074;30032202 116890830 MODEL JAAIVD010000001;XM_032891347;XM_032891348;XM_032891349 XP_032747238;XP_032747239;XP_032747240 cysteine--tRNA ligase, cytoplasmic protein-coding 625973113 Trnay-gua transfer RNA tyrosine (anticodon GUA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42430176 42430260 - 116884181 MODEL JAAIVD010000009 trna 625973114 Sdc1 syndecan 1 ENCODES a protein that exhibits cargo receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); myoblast development (ortholog); positive regulation of exosomal secretion (ortholog); PARTICIPATES IN altered melanocortin system pathway; melanocortin system pathway; obesity pathway; ASSOCIATED WITH COVID-19 (ortholog); familial hyperlipidemia (ortholog); Hodgkin's lymphoma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) 7 29012562 29034836 + 30032202 116906303 MODEL JAAIVD010000026;XM_032909209 XP_032765100 syndecan-1 protein-coding 625973123 LOC116895474 vomeronasal type-2 receptor 1-like 3 90877014 90907026 + 22301074;30032202 116895474 MODEL JAAIVD010000012;XM_032896734 XP_032752625 protein-coding 625973132 LOC116894571 vomeronasal type-2 receptor 116-like 2 178797871 178818654 + 22301074;30032202 116894571 MODEL JAAIVD010000001;XM_032896286;XM_032896287;XM_032896288;XM_032896289 XP_032752177;XP_032752178;XP_032752179;XP_032752180 protein-coding 625973151 LOC116906375 small nucleolar RNA SNORD113/SNORD114 family 7 127242115 127242189 + 116906375 MODEL JAAIVD010000026;XR_004388644 snorna 625973154 Hsd17b3 hydroxysteroid 17-beta dehydrogenase 3 ENCODES a protein that exhibits estradiol 17-beta-dehydrogenase [NAD(P)+] activity (ortholog); testosterone dehydrogenase (NAD+) activity (ortholog); testosterone dehydrogenase (NADP+) activity (ortholog); INVOLVED IN androgen biosynthetic process (ortholog); cellular response to antibiotic (ortholog); cellular response to gonadotropin stimulus (ortholog); PARTICIPATES IN estradiol biosynthetic pathway; testosterone biosynthetic pathway; ASSOCIATED WITH 17-beta hydroxysteroid dehydrogenase 3 deficiency (ortholog); Alzheimer's disease (ortholog); disorder of sexual development (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 14 75463047 75493281 + 30032202 116883512 MODEL JAAIVD010000009;XM_032884683 XP_032740574 testosterone 17-beta-dehydrogenase 3 protein-coding 625973169 LOC116910349 60S ribosomal protein L6-like 9 69040213 69043296 - 116910349 MODEL JAAIVD010000002 pseudo 625973170 LOC116885226 uncharacterized LOC116885226 16 36460322 36462400 - 116885226 MODEL JAAIVD010000004;XR_004385997 ncrna 625973175 Maf MAF bZIP transcription factor ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cell development (ortholog); gene expression (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH Ayme-Gripp syndrome (ortholog); cataract (ortholog); cataract 21 multiple types (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 17 35326762 35351336 - 30032202 116886517 MODEL JAAIVD010000011;XM_032888028 XP_032743919 transcription factor Maf protein-coding 625973182 P2ry4 pyrimidinergic receptor P2Y4 ENCODES a protein that exhibits ATP binding (ortholog); G protein-coupled UTP receptor activity (ortholog); INVOLVED IN cellular response to prostaglandin E stimulus (ortholog); regulation of presynaptic cytosolic calcium ion concentration (ortholog); regulation of synaptic vesicle exocytosis (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); glutamatergic synapse (ortholog) X 58338038 58341287 - 22301074;30032202 116889240 MODEL JAAIVD010000014;XM_032890390;XM_032890391 XP_032746281;XP_032746282 P2Y purinoceptor 4 protein-coding 625973191 Cnot3 CCR4-NOT transcription complex subunit 3 INVOLVED IN determination of left/right symmetry (ortholog); gene expression (ortholog); mRNA catabolic process (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); developmental and epileptic encephalopathy 11 (ortholog); genetic disease (ortholog); FOUND IN CCR4-NOT complex (ortholog); P-body (ortholog) 2 178235235 178251235 + 22301074;30032202 116892699 MODEL JAAIVD010000001;XM_032894557;XM_032894558;XM_032894559;XM_032894560 XP_032750448;XP_032750449;XP_032750450;XP_032750451 protein-coding 625973221 Efnb3 ephrin B3 ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN adult walking behavior (ortholog); axon choice point recognition (ortholog); axon guidance (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH movement disease (ortholog); FOUND IN glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog); plasma membrane (ortholog) 9 49165136 49170422 - 30032202 116909601 MODEL JAAIVD010000002;XM_032913224 XP_032769115 ephrin-B3 protein-coding 625973230 LOC116904482 NEDD4-binding protein 1-like 6 144415988 144417223 + 30032202 116904482 MODEL JAAIVD010000024;XM_032907284 XP_032763175 protein-coding 625973234 Fkbp6 FKBP prolyl isomerase family member 6 (inactive) ENCODES a protein that exhibits Hsp90 protein binding (ortholog); identical protein binding (ortholog); peptidyl-prolyl cis-trans isomerase activity (ortholog); INVOLVED IN meiotic cell cycle (ortholog); piRNA processing (ortholog); positive regulation of viral genome replication (ortholog); ASSOCIATED WITH genetic disease (ortholog); male infertility (ortholog); spermatogenic failure 77 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); fibrillar center (ortholog) 16 18661315 18732104 + 22301074 116885655 MODEL JAAIVD010000004;XM_032886958;XM_032886959 XP_032742849;XP_032742850 FKBP prolyl isomerase 6;inactive peptidyl-prolyl cis-trans isomerase FKBP6 protein-coding 625973251 Cd68 CD68 molecule INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to nutrient levels (ortholog); cellular response to oxidised low-density lipoprotein particle stimulus (ortholog); ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); adult T-cell leukemia/lymphoma (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); FOUND IN lysosome (ortholog); plasma membrane (ortholog) 9 49275365 49277810 - 22301074;30032202 116910475 MODEL JAAIVD010000002;XM_032914349;XM_032914350 XP_032770240;XP_032770241 macrosialin protein-coding 625973264 LOC116902505 small nucleolar RNA SNORA73 family 5 99579148 99579351 + 116902505 MODEL JAAIVD010000023;XR_004388115 snorna 625973267 LOC116897474 U7 small nuclear RNA 3 208316577 208316638 + 116897474 MODEL JAAIVD010000012;XR_004387500 snrna 625973270 LOC116889488 small nucleolar RNA SNORA48 X 23154876 23155019 + 116889488 MODEL JAAIVD010000014;XR_004386439 snorna 625973273 Lyn LYN proto-oncogene, Src family tyrosine kinase ENCODES a protein that exhibits enzyme binding (ortholog); ephrin receptor binding (ortholog); gamma-tubulin binding (ortholog); INVOLVED IN autophagy (ortholog); B cell homeostasis (ortholog); B cell proliferation (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; erythropoietin signaling pathway; ASSOCIATED WITH Cardiomegaly (ortholog); COVID-19 (ortholog); endometriosis (ortholog); FOUND IN adherens junction (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) 7 72960195 73071603 - 22301074;30032202 116905089 MODEL JAAIVD010000026;XM_032907811;XM_032907812 XP_032763702;XP_032763703 tyrosine-protein kinase Lyn protein-coding 625973294 Trnap-ugg transfer RNA proline (anticodon UGG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889724 MODEL JAAIVD010000061 trna 625973295 Sstr2 somatostatin receptor 2 ENCODES a protein that exhibits PDZ domain binding (ortholog); protein heterodimerization activity (ortholog); somatostatin receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cellular response to estradiol stimulus (ortholog); cellular response to glucocorticoid stimulus (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); Experimental Diabetes Mellitus (ortholog); neuroendocrine tumor (ortholog); FOUND IN cytosol (ortholog); G protein-coupled receptor heterodimeric complex (ortholog); membrane (ortholog) 9 75682951 75690131 - 22301074;30032202 116909177 MODEL JAAIVD010000002;XM_032912667;XM_032912668 XP_032768558;XP_032768559 somatostatin receptor type 2 protein-coding 625973307 Zbtb48 zinc finger and BTB domain containing 48 ENCODES a protein that exhibits double-stranded telomeric DNA binding (ortholog); identical protein binding (ortholog); RNA binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); regulation of RNA metabolic process (ortholog); telomere maintenance via telomere lengthening (ortholog); FOUND IN chromosome, telomeric region (ortholog); nucleoplasm (ortholog) 1 8713165 8721333 + 22301074;30032202 116892380 MODEL JAAIVD010000025;XM_032894047 XP_032749938 telomere zinc finger-associated protein protein-coding 625973322 LOC116912002 COP9 signalosome complex subunit 8-like 11 51014189 51014852 + 116912002 MODEL JAAIVD010000006 pseudo 625973323 St3gal6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 ENCODES a protein that exhibits N-acetyllactosaminide alpha-2,3-sialyltransferase activity (ortholog); INVOLVED IN cellular response to interleukin-6 (ortholog); glycolipid biosynthetic process (ortholog); glycoprotein biosynthetic process (ortholog) 4 42459534 42492143 - 30032202 116898914 MODEL JAAIVD010000003;XM_032900323 XP_032756214 type 2 lactosamine alpha-2,3-sialyltransferase protein-coding 625973337 Fcer1g Fc fragment of IgE receptor Ig ENCODES a protein that exhibits identical protein binding (ortholog); IgE binding (ortholog); IgE receptor activity (ortholog); INVOLVED IN antigen processing and presentation of exogenous peptide antigen via MHC class I (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); cell surface receptor signaling pathway (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH drug allergy (ortholog); Experimental Liver Cirrhosis (ortholog); Genetic Predisposition to Disease (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); Fc-epsilon receptor I complex (ortholog) 10 50394281 50398895 - 22301074;30032202 116911016 MODEL JAAIVD010000005;XM_032914748;XR_004389299 XP_032770639 high affinity immunoglobulin epsilon receptor subunit gamma protein-coding 625973348 LOC116886002 small nucleolar RNA SNORA51 16 9257279 9257410 + 116886002 MODEL JAAIVD010000004;XR_004386074 snorna 625973351 Spaca6 sperm acrosome associated 6 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); sperm-egg recognition (ortholog); FOUND IN acrosomal vesicle (ortholog); plasma membrane (ortholog) 2 100768843 100779627 - 30032202 116891789 MODEL JAAIVD010000001;XM_032893141;XR_004386860;XR_004386861 XP_032749032 sperm acrosome membrane-associated protein 6 protein-coding 625973368 Tex28 testis expressed 28 X 128143905 128164577 - 30032202 116888247 MODEL JAAIVD010000014;XM_032889533 XP_032745424 testis-specific protein TEX28 protein-coding 625973374 Mrpl22 mitochondrial ribosomal protein L22 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 9 40061885 40070417 - 22301074;30032202 116908668 MODEL JAAIVD010000002;XM_032911951 XP_032767842 39S ribosomal protein L22, mitochondrial protein-coding 625973385 Gpr75 G protein-coupled receptor 75 ENCODES a protein that exhibits C-C chemokine receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN chemokine-mediated signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); FOUND IN plasma membrane (ortholog) 11 98389718 98391763 + 22301074;30032202 116912638 MODEL JAAIVD010000006;XM_032916756 XP_032772647 probable G-protein coupled receptor 75 protein-coding 625973390 LOC116883397 uncharacterized LOC116883397 14 47494696 47495831 - 116883397 MODEL JAAIVD010000009;XR_004385756 ncrna 625973394 LOC116890077 olfactory receptor 2AP1 1 215231782 215232711 - 22301074;30032202 116890077 MODEL JAAIVD010000025;XM_032890840 XP_032746731 protein-coding 625973397 Atp2a3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); calcium ion binding (ortholog); calcium ion transmembrane transporter activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); calcium ion transport from cytosol to endoplasmic reticulum (ortholog); endoplasmic reticulum calcium ion homeostasis (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH adenoma (ortholog); Experimental Diabetes Mellitus (ortholog); hypertension (ortholog); FOUND IN endoplasmic reticulum (ortholog); sarcoplasmic reticulum (ortholog) 9 42518578 42548788 - 22301074;30032202 116908799 MODEL JAAIVD010000002;XM_032912201 XP_032768092 sarcoplasmic/endoplasmic reticulum calcium ATPase 3 protein-coding 625973422 LOC116906513 U4 spliceosomal RNA 7 51673584 51673740 + 116906513 MODEL JAAIVD010000026 pseudo 625973423 LOC116890074 olfactory receptor 9K2 1 215061473 215062447 - 22301074;30032202 116890074 MODEL JAAIVD010000025;XM_032890837 XP_032746728 protein-coding 625973427 LOC116895434 cleavage and polyadenylation specificity factor subunit 3-like 3 67598376 67600368 + 116895434 MODEL JAAIVD010000012 pseudo 625973428 Tnip1 TNFAIP3 interacting protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); mitogen-activated protein kinase binding (ortholog); polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN glycoprotein biosynthetic process (ortholog); leukocyte cell-cell adhesion (ortholog); MyD88-dependent toll-like receptor signaling pathway (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); asthma (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 9 37348670 37389165 - 30032202 116908971 MODEL JAAIVD010000002;XM_032912434 XP_032768325 TNFAIP3-interacting protein 1 protein-coding 625973450 Dio3 iodothyronine deiodinase 3 ENCODES a protein that exhibits thyroxine 5'-deiodinase activity (ortholog); thyroxine 5-deiodinase activity (ortholog); INVOLVED IN apoptotic process (ortholog); brown fat cell proliferation (ortholog); positive regulation of multicellular organism growth (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Neoplasms (ortholog); congestive heart failure (ortholog) 7 127842023 127844080 + 22301074;30032202 116905913 MODEL JAAIVD010000026;XM_032908899 XP_032764790 thyroxine 5-deiodinase protein-coding 625973455 Ell3 elongation factor for RNA polymerase II 3 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN DNA-templated transcription elongation (ortholog); negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); negative regulation of signal transduction by p53 class mediator (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription elongation factor complex (ortholog) 5 99592097 99596088 - 22301074;30032202 116901861 MODEL JAAIVD010000023;XM_032904058;XM_032904059 XP_032759949;XP_032759950 RNA polymerase II elongation factor ELL3 protein-coding 625973473 Capn13 calpain 13 7 19844063 19916586 + 22301074;30032202 116905945 MODEL JAAIVD010000026;XM_032908939 XP_032764830 calpain-13 protein-coding 625973499 LOC116897414 U1 spliceosomal RNA 3 60952271 60952435 - 116897414 MODEL JAAIVD010000012;XR_004387456 snrna 625973502 LOC116904392 protein FAM114A2-like 6 97461442 97462916 + 116904392 MODEL JAAIVD010000024 pseudo 625973503 Mcm9 minichromosome maintenance 9 homologous recombination repair factor ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); chromatin binding (ortholog); DNA helicase activity (ortholog); INVOLVED IN DNA damage response (ortholog); DNA replication (ortholog); double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH genetic disease (ortholog); hepatocellular carcinoma (ortholog); ovarian dysgenesis 4 (ortholog); FOUND IN MCM8-MCM9 complex (ortholog); nucleus (ortholog) 18 30516090 30589821 - 22301074;30032202 116886841 MODEL JAAIVD010000013;XM_032888289 XP_032744180 DNA helicase MCM9 protein-coding 625973519 Hipk2 homeodomain interacting protein kinase 2 ENCODES a protein that exhibits DNA binding (ortholog); protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); adult walking behavior (ortholog); anterior/posterior pattern specification (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); nephrosclerosis (ortholog); ureteral obstruction (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nuclear body (ortholog) 6 100928625 101106317 + 22301074;30032202 116903939 MODEL JAAIVD010000024;XM_032906717;XM_032906718;XM_032906719;XM_032906720 XP_032762608;XP_032762609;XP_032762610;XP_032762611 homeodomain-interacting protein kinase 2 protein-coding 625973545 LOC116900627 signal-regulatory protein beta-1-like 5 108199778 108280814 - 30032202 116900627 MODEL JAAIVD010000023;XM_032902344 XP_032758235 protein-coding 625973556 LOC116905921 uncharacterized LOC116905921 7 129936534 129937851 + 116905921 MODEL JAAIVD010000026;XR_004388578 ncrna 625973560 LOC116888075 39S ribosomal protein L15, mitochondrial-like X 90122493 90127490 + 116888075 MODEL JAAIVD010000014 pseudo 625973561 Bcar3 BCAR3 adaptor protein, NSP family member ENCODES a protein that exhibits kinase binding (ortholog); phosphotyrosine residue binding (ortholog); INVOLVED IN endothelin receptor signaling pathway (ortholog); epidermal growth factor receptor signaling pathway (ortholog); insulin receptor signaling pathway (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); substance-related disorder (ortholog); FOUND IN focal adhesion (ortholog); membrane (ortholog) 3 37310848 37355820 - 22301074;30032202 116896298 MODEL JAAIVD010000012;XM_032897385 XP_032753276 breast cancer anti-estrogen resistance protein 3 protein-coding 625973575 Ing4 inhibitor of growth family member 4 ENCODES a protein that exhibits histone H3K14 acetyltransferase activity (ortholog); histone H3K4me3 reader activity (ortholog); histone H4K12 acetyltransferase activity (ortholog); INVOLVED IN DNA replication-dependent chromatin disassembly (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); Lymphatic Metastasis (ortholog); prostate cancer (ortholog); FOUND IN histone acetyltransferase complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 6 22846757 22855425 - 30032202 116903264 MODEL JAAIVD010000024;XM_032905658;XM_032905659;XM_032905660 XP_032761549;XP_032761550;XP_032761551 inhibitor of growth protein 4 protein-coding 625973591 Akr1b10 aldo-keto reductase family 1 member B10 ENCODES a protein that exhibits alcohol dehydrogenase (NADP+) activity (ortholog); aldose reductase (NADPH) activity (ortholog); all-trans-retinol dehydrogenase (NADP+) activity (ortholog); INVOLVED IN cellular detoxification of aldehyde (ortholog); daunorubicin metabolic process (ortholog); doxorubicin metabolic process (ortholog); PARTICIPATES IN retinol metabolic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Colorectal Neoplasms (ortholog); contact dermatitis (ortholog); FOUND IN cytosol (ortholog); extracellular region (ortholog); lysosome (ortholog) 6 105304507 105316485 - 30032202 116903979 MODEL JAAIVD010000024;XM_032906787 XP_032762678 protein-coding 625973605 Pusl1 pseudouridine synthase like 1 ENCODES a protein that exhibits tRNA pseudouridine(38-40) synthase activity (ortholog); INVOLVED IN tRNA pseudouridine synthesis (ortholog); FOUND IN mitochondrion (ortholog) 1 4739020 4743551 + 22301074;30032202 116891649 MODEL JAAIVD010000025;XM_032892895;XM_032892903;XM_032892914;XR_004386857 XP_032748786;XP_032748794;XP_032748805 tRNA pseudouridine synthase-like 1 protein-coding 625973626 LOC116902474 U6 spliceosomal RNA 5 78658481 78658583 + 116902474 MODEL JAAIVD010000023;XR_004388092 snrna 625973629 Tmem98 transmembrane protein 98 INVOLVED IN negative regulation of myelination (ortholog); negative regulation of oligodendrocyte differentiation (ortholog); negative regulation of protein localization to nucleus (ortholog); ASSOCIATED WITH genetic disease (ortholog); Nanophthalmos 4 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); extracellular exosome (ortholog) 9 89618507 89629198 - 30032202 116909542 MODEL JAAIVD010000002;XM_032913158 XP_032769049 protein-coding 625973640 Dhodh dihydroorotate dehydrogenase (quinone) ENCODES a protein that exhibits dihydroorotase activity (ortholog); dihydroorotate dehydrogenase (quinone) activity (ortholog); dihydroorotate dehydrogenase activity (ortholog); INVOLVED IN 'de novo' pyrimidine nucleobase biosynthetic process (ortholog); 'de novo' UMP biosynthetic process (ortholog); female pregnancy (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; de novo pyrimidine biosynthetic pathway; dihydropyrimidinase deficiency pathway; ASSOCIATED WITH beta thalassemia (ortholog); erythroleukemia (ortholog); Experimental Arthritis (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); neuronal cell body (ortholog) 17 29313558 29327396 - 22301074;30032202 116886393 MODEL JAAIVD010000011;XM_032887861 XP_032743752 dihydroorotate dehydrogenase (quinone), mitochondrial protein-coding 625973653 LOC116905699 leydig cell tumor 10 kDa protein-like 7 62379617 62379924 + 116905699 MODEL JAAIVD010000026 pseudo 625973654 LOC116904770 small nucleolar RNA SNORA17 6 42759330 42759446 + 116904770 MODEL JAAIVD010000024 pseudo 625973655 Pck2 phosphoenolpyruvate carboxykinase 2, mitochondrial ENCODES a protein that exhibits manganese ion binding (ortholog); phosphoenolpyruvate carboxykinase (GTP) activity (ortholog); phosphoenolpyruvate carboxykinase activity (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cellular response to tumor necrosis factor (ortholog); gluconeogenesis (ortholog); PARTICIPATES IN gluconeogenesis pathway; ASSOCIATED WITH COVID-19 (ortholog); Endotoxemia (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 12 69459224 69468598 - 22301074;30032202 116913578 MODEL JAAIVD010000007;XM_032917797 XP_032773688 phosphoenolpyruvate carboxykinase [GTP], mitochondrial protein-coding 625973669 Lrrc20 leucine rich repeat containing 20 18 27306861 27408519 + 22301074 116887252 MODEL JAAIVD010000013;XM_032888819 XP_032744710 leucine-rich repeat-containing protein 20 protein-coding 625973678 LOC116911823 small nucleolar RNA SNORA17 10 66725275 66725407 - 116911823 MODEL JAAIVD010000005;XR_004389360 snorna 625973681 Cpb2 carboxypeptidase B2 ENCODES a protein that exhibits carboxypeptidase activity (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); fibrinolysis (ortholog); liver regeneration (ortholog); PARTICIPATES IN fibrinolysis pathway; ASSOCIATED WITH amenorrhea (ortholog); Angina Pectoris (ortholog); Bacteremia (ortholog); FOUND IN extracellular region (ortholog) 12 49111148 49154142 - 22301074;30032202 116913520 MODEL JAAIVD010000007;XM_032917721;XM_032917722 XP_032773612;XP_032773613 protein-coding 625973700 Farp1 FERM, ARH/RhoGEF and pleckstrin domain protein 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN dendrite morphogenesis (ortholog); enzyme-linked receptor protein signaling pathway (ortholog); postsynaptic actin cytoskeleton organization (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); substance-related disorder (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog); dendrite (ortholog) 12 3598207 3671454 - 22301074;30032202 116913134 MODEL JAAIVD010000007;XM_032917337;XM_032917338 XP_032773228;XP_032773229 FERM, ARHGEF and pleckstrin domain-containing protein 1 protein-coding 625973733 LOC116910638 U6 spliceosomal RNA 9 84333528 84333632 + 116910638 MODEL JAAIVD010000002;XR_004389176 snrna 625973736 LOC116885222 uncharacterized LOC116885222 16 40128132 40129614 - 116885222 MODEL JAAIVD010000004;XR_004385996 ncrna 625973740 LOC116889132 synaptonemal complex protein 3-like X 117042590 117056784 - 30032202 116889132 MODEL JAAIVD010000014;XM_032890303 XP_032746194 protein-coding 625973752 LOC116897497 small nucleolar RNA SNORA5 3 60582579 60582714 + 116897497 MODEL JAAIVD010000012;XR_004387518 snorna 625973755 Ik IK cytokine ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN mitotic cell cycle (ortholog); mitotic spindle assembly checkpoint signaling (ortholog); mRNA splicing, via spliceosome (ortholog); FOUND IN mitotic spindle pole (ortholog); nuclear chromosome (ortholog); nuclear speck (ortholog) 15 7622976 7637903 - 30032202 116884453 MODEL JAAIVD010000010;XM_032885552 XP_032741443 protein Red protein-coding 625973779 Slain1 SLAIN motif family member 1 12 21032597 21092503 - 30032202 116913087 MODEL JAAIVD010000007;XM_032917219;XM_032917220 XP_032773110;XP_032773111 SLAIN motif-containing protein 1 protein-coding 625973792 LOC116893675 olfactory receptor 5A1-like 2 12249352 12250626 - 22301074;30032202 116893675 MODEL JAAIVD010000001;XM_032895391 XP_032751282 protein-coding 625973796 LOC116902457 olfactory receptor 1J2-like 5 13172209 13173136 - 116902457 MODEL JAAIVD010000023 pseudo 625973797 LOC116912730 mortality factor 4-like protein 1 11 79330325 79331285 - 116912730 MODEL JAAIVD010000006 pseudo 625973798 LOC116903894 basic salivary proline-rich protein 3-like 6 16097641 16100672 + 116903894 MODEL JAAIVD010000024;XM_032906655 XP_032762546 protein-coding 625973802 Orai1 ORAI calcium release-activated calcium modulator 1 ENCODES a protein that exhibits calcium channel activity (ortholog); identical protein binding (ortholog); store-operated calcium channel activity (ortholog); INVOLVED IN calcineurin-NFAT signaling cascade (ortholog); calcium ion import (ortholog); calcium ion transmembrane transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH congenital structural myopathy (ortholog); genetic disease (ortholog); hypertension (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell periphery (ortholog); growth cone (ortholog) 16 30793006 30808209 - 30032202 116885656 MODEL JAAIVD010000004;XM_032886960;XM_032886961 XP_032742851;XP_032742852 calcium release-activated calcium channel protein 1 protein-coding 625973814 Plcd1 phospholipase C delta 1 ENCODES a protein that exhibits C-type glycerophospholipase activity (ortholog); calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to calcium ion (ortholog); G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN G protein mediated signaling pathway; ASSOCIATED WITH alopecia (ortholog); Alzheimer's disease (ortholog); congestive heart failure (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) 8 110311679 110334165 - 22301074;30032202 116907903 MODEL JAAIVD010000027;XM_032911101;XM_032911102 XP_032766992;XP_032766993 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 protein-coding 625973836 LOC116909403 immunity-related GTPase family M protein-like 9 40035736 40037238 - 22301074;30032202 116909403 MODEL JAAIVD010000002;XM_032912968 XP_032768859 protein-coding 625973841 LOC116902988 uncharacterized LOC116902988 6 136485065 136488603 - 116902988 MODEL JAAIVD010000024;XR_004388246 ncrna 625973846 LOC116892932 40S ribosomal protein S27-like 2 206372497 206373236 - 22301074;30032202 116892932 MODEL JAAIVD010000001;XM_032894870 XP_032750761 protein-coding 625973851 Kcns3 potassium voltage-gated channel modifier subfamily S member 3 ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) 7 31097039 31144334 - 22301074;30032202 116904876 MODEL JAAIVD010000026;XM_032907473;XM_032907474;XM_032907475;XM_032907476 XP_032763364;XP_032763365;XP_032763366;XP_032763367 potassium voltage-gated channel subfamily S member 3 protein-coding 625973867 Col6a2 collagen type VI alpha 2 chain ENCODES a protein that exhibits collagen binding (ortholog); INVOLVED IN neuron apoptotic process (ortholog); phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); response to glucose (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Bethlem myopathy (ortholog); Bethlem myopathy 1A (ortholog); Bethlem myopathy 1B (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog); plasma membrane (ortholog) 8 106522041 106550111 + 116907851 MODEL JAAIVD010000027;XM_032911041 XP_032766932 collagen alpha-2(VI) chain protein-coding 625973899 LOC116890503 small nucleolar RNA SNORA48 1 254715122 254715259 - 116890503 MODEL JAAIVD010000025;XR_004386689 snorna 625973902 Rps27l ribosomal protein S27 like ENCODES a protein that exhibits translation activator activity (ortholog); INVOLVED IN DNA damage response, signal transduction by p53 class mediator (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); mitotic G1 DNA damage checkpoint signaling (ortholog); PARTICIPATES IN ribosome biogenesis pathway; FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); nucleolus (ortholog) 8 61305467 61308963 + 22301074;30032202;8441676 116907713 MODEL JAAIVD010000027;X59375;XM_032910839 CAA42019;XP_032766730 40S ribosomal protein S27-like protein-coding 625973910 Fshr follicle stimulating hormone receptor ENCODES a protein that exhibits follicle-stimulating hormone receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN follicle-stimulating hormone signaling pathway; vasopressin signaling pathway via receptor type 2; ASSOCIATED WITH 46 XX gonadal dysgenesis (ortholog); amenorrhea (ortholog); genetic disease (ortholog); FOUND IN cell surface (ortholog); endosome (ortholog); membrane (ortholog) 7 3624717 3809156 + 22301074;30032202 116905657 MODEL JAAIVD010000026;XM_032908629;XM_032908630 XP_032764520;XP_032764521 follicle-stimulating hormone receptor protein-coding 625973927 Gucd1 guanylyl cyclase domain containing 1 INVOLVED IN liver regeneration (ortholog); response to cAMP (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog) 18 11930018 11940245 + 116887007 MODEL JAAIVD010000013;XM_032888491;XM_032888492 XP_032744382;XP_032744383 protein GUCD1 protein-coding 625973942 LOC116889089 serine/threonine-protein phosphatase PP1-gamma catalytic subunit-like X 99305315 99306560 - 116889089 MODEL JAAIVD010000014 pseudo 625973943 Zbtb7b zinc finger and BTB domain containing 7B ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN adaptive thermogenesis (ortholog); lactation (ortholog); negative regulation of CD8-positive, alpha-beta T cell differentiation (ortholog); ASSOCIATED WITH obesity (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 3 64273353 64289201 + 22301074;30032202 116896645 MODEL JAAIVD010000012;XM_032897966;XM_032897967;XM_032897968;XM_032897970 XP_032753857;XP_032753858;XP_032753859;XP_032753861 zinc finger and BTB domain-containing protein 7B protein-coding 625973960 Kctd13 potassium channel tetramerization domain containing 13 ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN cell migration (ortholog); negative regulation of Rho protein signal transduction (ortholog); neural precursor cell proliferation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal dominant nocturnal frontal lobe epilepsy 5 (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 2 74947439 74965251 - 22301074;30032202 116891497 MODEL JAAIVD010000001;XM_032892608 XP_032748499 BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 1 protein-coding 625973970 LOC116908159 glutathione S-transferase P-like 8 39833927 39834555 + 116908159 MODEL JAAIVD010000027 pseudo 625973971 LOC116900060 acyl-CoA-binding protein-like 5 6443428 6443915 + 22301074;30032202 116900060 MODEL JAAIVD010000023;XM_032901852 XP_032757743 protein-coding 625973976 Wdr64 WD repeat domain 64 10 54222742 54338900 + 22301074 116911383 MODEL JAAIVD010000005;XM_032915334 XP_032771225 WD repeat-containing protein 64 protein-coding 625974007 Abhd17a abhydrolase domain containing 17A, depalmitoylase ENCODES a protein that exhibits palmitoyl-(protein) hydrolase activity (ortholog); INVOLVED IN negative regulation of NLRP3 inflammasome complex assembly (ortholog); negative regulation of protein localization to microtubule (ortholog); negative regulation of vesicle fusion (ortholog); FOUND IN endosome membrane (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) 1 154295704 154302137 + 30032202 116905023 MODEL JAAIVD010000025;XM_032907706 XP_032763597 alpha/beta hydrolase domain-containing protein 17A protein-coding 625974016 Prr19 proline rich 19 FOUND IN chromosome (ortholog); nucleus (ortholog) 2 169411318 169414134 - 116894478 MODEL JAAIVD010000001;XM_032896188;XM_032896189 XP_032752079;XP_032752080 proline-rich protein 19 protein-coding 625974026 C2H11orf86 chromosome 2 C11orf86 homolog 2 3155474 3157375 + 116890768 MODEL JAAIVD010000001;XM_032891233;XM_032891234 XP_032747124;XP_032747125 uncharacterized protein C11orf86 homolog protein-coding 625974036 LOC116890420 U7 small nuclear RNA 1 245514851 245514916 - 116890420 MODEL JAAIVD010000025 pseudo 625974037 Nmu neuromedin U ENCODES a protein that exhibits neuromedin U receptor binding (ortholog); neuropeptide activity (ortholog); type 1 neuromedin U receptor binding (ortholog); INVOLVED IN eating behavior (ortholog); energy homeostasis (ortholog); gastric acid secretion (ortholog); ASSOCIATED WITH obesity (ortholog); FOUND IN extracellular region (ortholog); terminal bouton (ortholog) 11 33074495 33099367 - 22301074;30032202 116911970 MODEL JAAIVD010000006;XM_032915889 XP_032771780 neuromedin-U protein-coding 625974048 Marchf4 membrane associated ring-CH-type finger 4 ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); ASSOCIATED WITH frontotemporal dementia (ortholog); FOUND IN Golgi stack (ortholog); trans-Golgi network (ortholog) 4 146021830 146133128 - 22301074;30032202 116899484 MODEL JAAIVD010000003;XM_032901318 XP_032757209 E3 ubiquitin-protein ligase MARCH4 protein-coding 625974056 Zfp90 ZFP90 zinc finger protein ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of DNA-templated transcription (ortholog); FOUND IN nucleus (ortholog) 17 26165478 26167903 + 30032202 116886410 MODEL JAAIVD010000011;XM_032887885 XP_032743776 zinc finger protein 90 homolog protein-coding 625974061 LOC116908939 proton-coupled amino acid transporter 1 9 37628173 37658295 + 30032202 116908939 MODEL JAAIVD010000002;XM_032912397 XP_032768288 protein-coding 625974076 LOC116908657 periphilin-1-like 9 8738282 8744874 + 30032202 116908657 MODEL JAAIVD010000002;XM_032911932;XM_032911933 XP_032767823;XP_032767824 protein-coding 625974085 Slc25a40 solute carrier family 25 member 40 ENCODES a protein that exhibits glutathione transmembrane transporter activity (ortholog); INVOLVED IN erythrocyte development (ortholog); FOUND IN mitochondrion (ortholog) 6 140323578 140367277 + 30032202 116904142 MODEL JAAIVD010000024;XM_032907032;XM_032907033;XM_032907034 XP_032762923;XP_032762924;XP_032762925 protein-coding 625974107 Vpreb3 V-set pre-B cell surrogate light chain 3 18 11499559 11500957 - 30032202 116887214 MODEL JAAIVD010000013;XM_032888776 XP_032744667 pre-B lymphocyte protein 3 protein-coding 625974112 LOC116911309 60S ribosomal protein L37-like 10 84832891 84833196 - 22301074;30032202 116911309 MODEL JAAIVD010000005;XM_032915224 XP_032771115 protein-coding 625974116 Trip10 thyroid hormone receptor interactor 10 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN epithelial to mesenchymal transition (ortholog); negative regulation of cardiac muscle cell apoptotic process (ortholog); positive regulation of cell growth involved in cardiac muscle cell development (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; insulin signaling pathway; ASSOCIATED WITH Diabetic Nephropathies (ortholog); Huntington's disease (ortholog) 4 88654908 88669109 + 22301074 116899218 MODEL JAAIVD010000003;XM_032900813;XM_032900814 XP_032756704;XP_032756705 cdc42-interacting protein 4 protein-coding 625974140 Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); IkappaB kinase activity (ortholog); INVOLVED IN B cell homeostasis (ortholog); canonical NF-kappaB signal transduction (ortholog); cellular response to tumor necrosis factor (ortholog); PARTICIPATES IN adenosine signaling pathway; FasL mediated signaling pathway; granulocyte-macrophage colony-stimulating factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); breast cancer (ortholog); Choroidal Neovascularization (ortholog); FOUND IN CD40 receptor complex (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) 13 63723847 63773590 + 22301074;30032202 116914376 MODEL JAAIVD010000008;XM_032918578;XM_032918579 XP_032774469;XP_032774470 inhibitor of nuclear factor kappa-B kinase subunit beta protein-coding 625974169 Ppp1r13l protein phosphatase 1 regulatory subunit 13 like ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cardiac muscle contraction (ortholog); cardiac right ventricle morphogenesis (ortholog); embryonic camera-type eye development (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH ARRHYTHMOGENIC CARDIOMYOPATHY WITH VARIABLE ECTODERMAL ABNORMALITIES (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); autosomal recessive disease (ortholog); FOUND IN cytosol (ortholog) 2 171241108 171261481 - 30032202 116892534 MODEL JAAIVD010000001;XM_032894294;XM_032894295 XP_032750185;XP_032750186 relA-associated inhibitor protein-coding 625974190 LOC116889281 peptidyl-prolyl cis-trans isomerase D-like X 62901698 62902811 - 116889281 MODEL JAAIVD010000014 pseudo 625974191 Ralyl RALY RNA binding protein like ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog) 3 147299387 147979976 + 22301074;30032202 116897043 MODEL JAAIVD010000012;XM_032898664 XP_032754555 RNA-binding Raly-like protein protein-coding 625974203 Unc119b unc-119 lipid binding chaperone B ENCODES a protein that exhibits lipid binding (ortholog); INVOLVED IN cilium assembly (ortholog); lipoprotein transport (ortholog); FOUND IN ciliary transition zone (ortholog); sperm end piece (ortholog); sperm midpiece (ortholog) 16 38690044 38699661 + 30032202 116885645 MODEL JAAIVD010000004;XM_032886953 XP_032742844 protein unc-119 homolog B protein-coding 625974212 Slc25a14 solute carrier family 25 member 14 ENCODES a protein that exhibits chloride transmembrane transporter activity (ortholog); protein homodimerization activity (ortholog); proton transmembrane transporter activity (ortholog); INVOLVED IN inorganic anion transport (ortholog); regulation of cellular response to oxidative stress (ortholog); FOUND IN mitochondrial envelope (ortholog); mitochondrion (ortholog) X 109642871 109683211 - 22301074 116888370 MODEL JAAIVD010000014;XM_032889639;XM_032889640;XM_032889641;XM_032889642;XM_032889643;XM_032889644;XM_032889645;XM_032889646 XP_032745530;XP_032745531;XP_032745532;XP_032745533;XP_032745534;XP_032745535;XP_032745536;XP_032745537 brain mitochondrial carrier protein 1 protein-coding 625974246 LOC116903108 uncharacterized LOC116903108 6 6006986 6042230 - 116903108 MODEL JAAIVD010000024;XR_004388250 ncrna 625974250 Asb6 ankyrin repeat and SOCS box containing 6 5 4793332 4797970 + 22301074;30032202 116901174 MODEL JAAIVD010000023;XM_032902834;XM_032902835 XP_032758725;XP_032758726 ankyrin repeat and SOCS box protein 6 protein-coding 625974263 LOC116886788 U6 spliceosomal RNA 17 24890172 24890265 + 116886788 MODEL JAAIVD010000011 pseudo 625974264 LOC116889144 developmental pluripotency-associated protein 4-like X 57772459 57773163 - 116889144 MODEL JAAIVD010000014 pseudo 625974265 LOC116907198 galectin-8-like 8 3912996 3924913 - 116907198 MODEL JAAIVD010000027 pseudo 625974266 LOC116906420 U1 spliceosomal RNA 7 68109878 68110041 - 116906420 MODEL JAAIVD010000026;XR_004388682 snrna 625974269 Spata4 spermatogenesis associated 4 FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog) 13 33828315 33837673 + 30032202 116914729 MODEL JAAIVD010000008;XM_032919162 XP_032775053 spermatogenesis-associated protein 4 protein-coding 625974278 LOC116894140 olfactory receptor 56A4-like 2 104054814 104055770 - 22301074 116894140 MODEL JAAIVD010000001;XM_032895858 XP_032751749 protein-coding 625974281 LOC116904886 ferritin light chain 1-like 7 33316192 33316971 + 116904886 MODEL JAAIVD010000026 pseudo 625974282 LOC116885577 uncharacterized LOC116885577 16 41585849 41587787 + 116885577 MODEL JAAIVD010000004;XR_004386024 ncrna 625974288 Nr4a3 nuclear receptor subfamily 4 group A member 3 ENCODES a protein that exhibits cAMP response element binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); INVOLVED IN adult behavior (ortholog); animal organ regeneration (ortholog); axon guidance (ortholog); ASSOCIATED WITH extraskeletal myxoid chondrosarcoma (ortholog); Hypercholesterolemia (ortholog); Insulin Resistance (ortholog); FOUND IN transcription regulator complex (ortholog) 1 101130273 101171318 + 22301074;30032202 116902004 MODEL JAAIVD010000025;XM_032904273;XM_032904281;XM_032904289 XP_032760164;XP_032760172;XP_032760180 protein-coding 625974308 Coxfa4 cytochrome c oxidase associated subunit FA4 ENCODES a protein that exhibits protein-containing complex binding (ortholog); ASSOCIATED WITH mitochondrial complex IV deficiency nuclear type 21 (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) 6 126886617 126893618 + 116904074 MODEL JAAIVD010000024;XM_032906938 XP_032762829 Ndufa4 NDUFA4 mitochondrial complex associated;cytochrome c oxidase subunit NDUFA4 protein-coding 625974316 Smad2 SMAD family member 2 ENCODES a protein that exhibits chromatin binding (ortholog); co-SMAD binding (ortholog); disordered domain specific binding (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); adrenal gland development (ortholog); anterior/posterior pattern specification (ortholog); PARTICIPATES IN activin signaling pathway; altered transforming growth factor-beta Smad dependent signaling pathway; colorectal cancer pathway; ASSOCIATED WITH acromicric dysplasia (ortholog); breast carcinoma (ortholog); cervical cancer (ortholog); FOUND IN activin responsive factor complex (ortholog); chromatin (ortholog); cytoplasm (ortholog) 15 55673845 55736167 - 22301074;30032202 116885018 MODEL JAAIVD010000010;XM_032886258;XM_032886259;XM_032886260;XM_032886261 XP_032742149;XP_032742150;XP_032742151;XP_032742152 mothers against decapentaplegic homolog 2 protein-coding 625974341 Wdr4 WDR4 tRNA N7-guanosine methyltransferase non-catalytic subunit ENCODES a protein that exhibits enzyme activator activity (ortholog); INVOLVED IN tRNA (guanine-N7)-methylation (ortholog); tRNA modification (ortholog); ASSOCIATED WITH Galloway-Mowat syndrome (ortholog); Galloway-Mowat Syndrome 6 (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); tRNA (m7G46) methyltransferase complex (ortholog) 18 2352632 2368838 + 22301074;30032202 116887568 MODEL JAAIVD010000013;XM_032889188 XP_032745079 WD repeat domain 4;tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 protein-coding 625974355 LOC116904319 argininosuccinate synthase-like 6 60825252 60826451 + 116904319 MODEL JAAIVD010000024 pseudo 625974356 LOC116902751 nucleoporin SEH1-like 6 6724491 6727482 + 116902751 MODEL JAAIVD010000024 pseudo 625974357 LOC116889729 energy-coupling factor transporter ATP-binding protein EcfA1-like 22301074;30032202 116889729 MODEL JAAIVD010000065;XM_032890604 XP_032746495 protein-coding 625974358 Trnah-gug transfer RNA histidin (anticodon GUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60801337 60801408 + 116897697 MODEL JAAIVD010000012 trna 625974359 LOC116889544 small nucleolar RNA SNORA11 X 12166588 12166707 - 116889544 MODEL JAAIVD010000014;XR_004386479 snorna 625974362 LOC116893761 prohibitin-like 2 29404366 29406224 + 116893761 MODEL JAAIVD010000001 pseudo 625974363 Rims4 regulating synaptic membrane exocytosis 4 ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN regulation of membrane potential (ortholog); regulation of synapse organization (ortholog); regulation of synaptic vesicle exocytosis (ortholog); FOUND IN glutamatergic synapse (ortholog); synapse (ortholog); synaptic membrane (ortholog) 5 154057495 154117237 + 30032202 116902372 MODEL JAAIVD010000023;XM_032904868;XM_032904869 XP_032760759;XP_032760760 regulating synaptic membrane exocytosis protein 4 protein-coding 625974375 LOC116906345 U7 small nuclear RNA 7 37822918 37822982 + 116906345 MODEL JAAIVD010000026;XR_004388625 snrna 625974378 Tcf3 transcription factor 3 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN B cell lineage commitment (ortholog); cell development (ortholog); chromatin remodeling (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); agammaglobulinemia (ortholog); Agammaglobulinemia 8 (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 154448448 154472581 + 22301074;30032202 116905048 MODEL JAAIVD010000025;XM_032907740;XM_032907749;XM_032907756;XM_032907766;XM_032907773 XP_032763631;XP_032763640;XP_032763647;XP_032763657;XP_032763664 transcription factor E2-alpha protein-coding 625974410 Igsf9b immunoglobulin superfamily member 9B ENCODES a protein that exhibits kinase binding (ortholog); INVOLVED IN homophilic cell-cell adhesion (ortholog); positive regulation of inhibitory postsynaptic potential (ortholog); synaptic membrane adhesion (ortholog); FOUND IN dendrite (ortholog); GABA-ergic synapse (ortholog); inhibitory synapse (ortholog) 8 23190907 23237374 + 22301074;30032202 116906657 MODEL JAAIVD010000027;XM_032909441;XM_032909442 XP_032765332;XP_032765333 protein turtle homolog B protein-coding 625974436 Scara5 scavenger receptor class A member 5 ENCODES a protein that exhibits ferritin receptor activity (ortholog); INVOLVED IN cellular response to heat (ortholog); endocytosis (ortholog); intracellular iron ion homeostasis (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) 12 58686988 58783442 - 22301074 116913487 MODEL JAAIVD010000007;XM_032917687 XP_032773578 protein-coding 625974449 LOC116894390 pregnancy-specific glycoprotein 22-like 2 157084728 157099547 + 30032202 116894390 MODEL JAAIVD010000001;XM_032896097 XP_032751988 protein-coding 625974458 Irag1 inositol 1,4,5-triphosphate receptor associated 1 INVOLVED IN negative regulation of smooth muscle contraction (ortholog); phosphatidylinositol-mediated signaling (ortholog); relaxation of vascular associated smooth muscle (ortholog) 2 90471437 90585299 + 30032202 116891655 MODEL JAAIVD010000001;XM_032892900;XM_032892901;XM_032892902 XP_032748791;XP_032748792;XP_032748793 protein MRVI1 protein-coding 625974489 Dot1l DOT1 like histone lysine methyltransferase ENCODES a protein that exhibits DNA binding (ortholog); histone H3K79 methyltransferase activity (ortholog); histone H3K79 trimethyltransferase activity (ortholog); INVOLVED IN gene expression (ortholog); negative regulation of gene expression, epigenetic (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH acute biphenotypic leukemia (ortholog); Colorectal Neoplasms (ortholog); Developmental Disease (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 154089673 154127485 - 22301074;30032202 116904902 MODEL JAAIVD010000025;XM_032907512;XM_032907520;XM_032907525 XP_032763403;XP_032763411;XP_032763416 histone-lysine N-methyltransferase, H3 lysine-79 specific protein-coding 625974531 LOC116900778 UMP-CMP kinase-like 5 153344453 153345163 + 116900778 MODEL JAAIVD010000023 pseudo 625974532 Adam29 ADAM metallopeptidase domain 29 INVOLVED IN energy homeostasis (ortholog); gene expression (ortholog); respiratory system process (ortholog); FOUND IN external side of plasma membrane (ortholog); sperm head plasma membrane (ortholog) 13 34054048 34056390 + 22301074;30032202 116915013 MODEL JAAIVD010000008;XM_032919416 XP_032775307 disintegrin and metalloproteinase domain-containing protein 29 protein-coding 625974535 Fbxo3 F-box protein 3 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN response to lipopolysaccharide (ortholog); SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (ortholog); FOUND IN nucleus (ortholog); SCF ubiquitin ligase complex (ortholog) 5 81847214 81878156 + 22301074 116901693 MODEL JAAIVD010000023;XM_032903820;XM_032903821;XM_032903822 XP_032759711;XP_032759712;XP_032759713 F-box only protein 3 protein-coding 625974556 Mlana melan-A ASSOCIATED WITH contact dermatitis (ortholog); malignant mesothelioma (ortholog); melanoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog); melanosome (ortholog) 2 29792885 29806746 + 22301074;30032202 116893766 MODEL JAAIVD010000001;XM_032895468 XP_032751359 melanoma antigen recognized by T-cells 1 protein-coding 625974565 Parp11 poly(ADP-ribose) polymerase family member 11 ENCODES a protein that exhibits NAD+ poly-ADP-ribosyltransferase activity (ortholog); NAD+-protein mono-ADP-ribosyltransferase activity (ortholog); INVOLVED IN nuclear envelope organization (ortholog); protein auto-ADP-ribosylation (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; FOUND IN nuclear body (ortholog); nuclear envelope (ortholog); nucleoplasm (ortholog) 6 20409954 20447186 - 22301074 116903234 MODEL JAAIVD010000024;XM_032905610;XM_032905611;XM_032905613 XP_032761501;XP_032761502;XP_032761504 protein mono-ADP-ribosyltransferase PARP11 protein-coding 625974583 Fitm1 fat storage inducing transmembrane protein 1 ENCODES a protein that exhibits diacylglycerol binding (ortholog); triglyceride binding (ortholog); INVOLVED IN fat cell differentiation (ortholog); lipid droplet formation (ortholog); lipid droplet organization (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 12 69432855 69434127 - 22301074;30032202 116913829 MODEL JAAIVD010000007;XM_032918141 XP_032774032 fat storage-inducing transmembrane protein 1 protein-coding 625974589 Ptpn14 protein tyrosine phosphatase non-receptor type 14 ENCODES a protein that exhibits protein tyrosine phosphatase activity (ortholog); receptor tyrosine kinase binding (ortholog); transcription coregulator activity (ortholog); INVOLVED IN lymphangiogenesis (ortholog); negative regulation of cell population proliferation (ortholog); regulation of protein export from nucleus (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Choanal Atresia and Lymphedema (ortholog); esophageal atresia/tracheoesophageal fistula (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 10 67797609 67942067 + 22301074;30032202 116911666 MODEL JAAIVD010000005;XM_032915621 XP_032771512 tyrosine-protein phosphatase non-receptor type 14 protein-coding 625974612 Erlin1 ER lipid raft associated 1 ENCODES a protein that exhibits cholesterol binding (ortholog); INVOLVED IN ERAD pathway (ortholog); negative regulation of cholesterol biosynthetic process (ortholog); negative regulation of fatty acid biosynthetic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hereditary spastic paraplegia (ortholog); hereditary spastic paraplegia 62 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); protein-containing complex (ortholog) 2 43566615 43601897 - 22301074;30032202 116891205 MODEL JAAIVD010000001;XM_032892032 XP_032747923 erlin-1 protein-coding 625974628 LOC116910955 high mobility group protein B1-like 10 82834926 82839268 - 116910955 MODEL JAAIVD010000005 pseudo 625974629 LOC116884103 U2 spliceosomal RNA 14 61901301 61901449 + 116884103 MODEL JAAIVD010000009 pseudo 625974630 LOC116896475 zinc finger MYM-type protein 1-like 1 31219976 31236686 + 22301074 116896475 MODEL JAAIVD010000025;XM_032897643;XM_032897651;XM_032897660;XM_032897668 XP_032753534;XP_032753542;XP_032753551;XP_032753559 protein-coding 625974649 Tmem132e transmembrane protein 132E INVOLVED IN posterior lateral line neuromast hair cell development (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 99 (ortholog); Breast Cancer, Familial (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cell body (ortholog) 9 88060998 88116320 - 116910386 MODEL JAAIVD010000002;XM_032914230 XP_032770121 protein-coding 625974662 LOC116905766 dehydrogenase/reductase SDR family member 7-like 7 86848592 86869412 - 116905766 MODEL JAAIVD010000026;XM_032908733 XP_032764624 protein-coding 625974670 Znf629 zinc finger protein 629 FOUND IN nucleoplasm (ortholog) 2 74284575 74293363 + 30032202 116891464 MODEL JAAIVD010000001;XM_032892553;XM_032892554 XP_032748444;XP_032748445 protein-coding 625974682 LOC116896072 discoidin, CUB and LCCL domain-containing protein 1-like 3 210529978 210568971 + 116896072 MODEL JAAIVD010000012 pseudo 625974683 LOC116910973 uncharacterized LOC116910973 10 88838756 88839378 - 116910973 MODEL JAAIVD010000005 pseudo 625974684 LOC116906184 DNA polymerase alpha catalytic subunit-like 7 113028470 113211031 + 30032202 116906184 MODEL JAAIVD010000026;XM_032909150 XP_032765041 protein-coding 625974699 Prox2 prospero homeobox 2 7 99196136 99205324 - 30032202 116905286 MODEL JAAIVD010000026;XM_032908147 XP_032764038 prospero homeobox protein 2 protein-coding 625974706 LOC116884424 40S ribosomal protein S3a-like 15 79196328 79200709 - 116884424 MODEL JAAIVD010000010 pseudo 625974707 LOC116892208 uncharacterized LOC116892208 2 155048293 155049000 - 116892208 MODEL JAAIVD010000001;XR_004386926 ncrna 625974711 C2H19orf47 chromosome 2 C19orf47 homolog 2 168366034 168387479 - 30032202 116892422 MODEL JAAIVD010000001;XM_032894104;XM_032894105 XP_032749995;XP_032749996 uncharacterized protein C19orf47 homolog protein-coding 625974728 LOC116894879 U6 spliceosomal RNA 2 221384443 221384549 + 116894879 MODEL JAAIVD010000001;XR_004387090 snrna 625974731 LOC116888944 60S ribosomal protein L7-like X 3013099 3013621 + 116888944 MODEL JAAIVD010000014 pseudo 625974732 Cacna1i calcium voltage-gated channel subunit alpha1 I ENCODES a protein that exhibits low voltage-gated calcium channel activity (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion import (ortholog); calcium ion transport (ortholog); calcium ion transport into cytosol (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); hydrocephalus (ortholog); Hyperalgesia (ortholog) 1 250055465 250165515 + 22301074;30032202 116913793 MODEL JAAIVD010000025;XM_032918103 XP_032773994 voltage-dependent T-type calcium channel subunit alpha-1I protein-coding 625974773 Znf883 zinc finger protein 883 1 91428369 91431694 - 30032202 116901455 MODEL JAAIVD010000025;XM_032903401 XP_032759292 protein-coding 625974778 LOC116893870 X-linked lymphocyte-regulated protein 3A-like 2 63051616 63061706 + 30032202 116893870 MODEL JAAIVD010000001;XM_032895594 XP_032751485 protein-coding 625974789 Syne4 spectrin repeat containing nuclear envelope family member 4 INVOLVED IN establishment of epithelial cell apical/basal polarity (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 76 (ortholog); nonsyndromic deafness (ortholog); FOUND IN nuclear outer membrane (ortholog) 2 165687924 165692852 - 30032202 116892323 MODEL JAAIVD010000001;XM_032893947;XM_032893948;XM_032893949 XP_032749838;XP_032749839;XP_032749840 nesprin-4 protein-coding 625974805 LOC116904705 small nucleolar RNA SNORA17 6 53626307 53626439 + 116904705 MODEL JAAIVD010000024;XR_004388400 snorna 625974808 LOC116913641 non-histone chromosomal protein HMG-17-like 12 26585102 26585363 - 116913641 MODEL JAAIVD010000007 pseudo 625974809 Rai14 retinoic acid induced 14 FOUND IN nucleoplasm (ortholog) 3 170025696 170160520 + 30032202 116897124 MODEL JAAIVD010000012;XM_032898780 XP_032754671 ankycorbin protein-coding 625974830 Rbp3 retinol binding protein 3 ENCODES a protein that exhibits retinol binding (ortholog); PARTICIPATES IN altered retinoid cycle metabolic pathway; retinitis pigmentosa pathway; retinoid cycle metabolic pathway; ASSOCIATED WITH autoimmune disease (ortholog); cone-rod dystrophy (ortholog); fundus dystrophy (ortholog); FOUND IN cone matrix sheath (ortholog); extracellular region (ortholog); interphotoreceptor matrix (ortholog) 13 9723908 9733055 + 22301074;7916695 116914662 A0A8A1UAH2 MODEL AB211044;AM408328;HM217603;HM217604;HM217605;HM217606;HM217744;HM217745;HM217746;HM217747;HM217748;HM217750;HM217751;HM217753;HM217754;JAAIVD010000008;JX457660;X69523;XM_032919064 ADJ19154;ADJ19155;ADJ19156;ADJ19157;ADJ19158;ADJ19160;ADJ19161;ADJ19163;ADJ19164;ADJ39577;ADJ39578;ADJ39579;ADJ39580;AGB51534;BAE46536;CAL64035;XP_032774955 IRBP interphotoreceptor retinoid binding protein;retinol-binding protein 3 protein-coding 625974838 Dock6 dedicator of cytokinesis 6 ASSOCIATED WITH Adams-Oliver syndrome (ortholog); Adams-Oliver Syndrome 2 (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog) 8 18066408 18118195 - 30032202 116906819 MODEL JAAIVD010000027;XM_032909699;XM_032909700;XM_032909701;XM_032909702 XP_032765590;XP_032765591;XP_032765592;XP_032765593 dedicator of cytokinesis protein 6 protein-coding 625974896 LOC116895249 olfactory receptor 8D1-like 3 83035 83991 - 116895249 MODEL JAAIVD010000012 pseudo 625974897 Cnot11 CCR4-NOT transcription complex subunit 11 FOUND IN CCR4-NOT complex (ortholog) 4 115776587 115786530 + 22301074;30032202 116899318 MODEL JAAIVD010000003;XM_032900986 XP_032756877 protein-coding 625974908 Znf444 zinc finger protein 444 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 2 179939068 179957758 - 30032202 116892725 MODEL JAAIVD010000001;XM_032894595;XM_032894596;XM_032894597;XM_032894599 XP_032750486;XP_032750487;XP_032750488;XP_032750490 protein-coding 625974925 Zbtb17 zinc finger and BTB domain containing 17 ENCODES a protein that exhibits core promoter sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN ectoderm development (ortholog); G1 to G0 transition (ortholog); gastrulation with mouth forming second (ortholog); FOUND IN nucleus (ortholog); protein-containing complex (ortholog); protein-DNA complex (ortholog) 1 16679010 16699799 - 22301074;30032202 116893350 MODEL JAAIVD010000025;XM_032895158 XP_032751049 zinc finger and BTB domain-containing protein 17 protein-coding 625974945 LOC116904821 U6 spliceosomal RNA 6 33470134 33470240 - 116904821 MODEL JAAIVD010000024;XR_004388472 snrna 625974948 LOC116888176 heat shock protein HSP 90-beta-like X 117855257 117857338 + 116888176 MODEL JAAIVD010000014 pseudo 625974949 Armcx3 armadillo repeat containing X-linked 3 INVOLVED IN axonal transport of mitochondrion (ortholog); intracellular protein localization (ortholog); mitochondrion organization (ortholog); FOUND IN cytosol (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) X 87055254 87060140 + 22301074;30032202 116888530 MODEL JAAIVD010000014;XM_032889827 XP_032745718 armadillo repeat-containing X-linked protein 3 protein-coding 625974958 LOC116884512 mesoderm induction early response protein 3-like 15 71707685 71709407 + 116884512 MODEL JAAIVD010000010 pseudo 625974959 LOC116897463 U7 small nuclear RNA 3 80232953 80233019 + 116897463 MODEL JAAIVD010000012 pseudo 625974960 Npm1 nucleophosmin 1 ENCODES a protein that exhibits ATP binding (ortholog); core promoter sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); cardiac muscle hypertrophy (ortholog); cell volume homeostasis (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH Acute Erythroleukemia (ortholog); acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 5980484 5990573 - 30032202 116909134 MODEL JAAIVD010000002;XM_032912618 XP_032768509 nucleophosmin protein-coding 625974975 LOC116913637 septin-2-like 12 55723860 55724990 + 116913637 MODEL JAAIVD010000007 pseudo 625974976 Pou3f2 POU class 3 homeobox 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN astrocyte development (ortholog); cerebral cortex radially oriented cell migration (ortholog); epidermis development (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) 1 120849091 120850789 + 22301074;30032202 116902824 MODEL JAAIVD010000025;XM_032905157 XP_032761048 POU domain, class 3, transcription factor 2 protein-coding 625974981 LOC116902557 small nucleolar RNA SNORA48 5 128370841 128370988 - 116902557 MODEL JAAIVD010000023;XR_004388156 snorna 625974984 LOC116913012 U6atac minor spliceosomal RNA 11 5151429 5151543 + 116913012 MODEL JAAIVD010000006 pseudo 625974985 LOC116904317 syntenin-1-like 6 60401335 60406803 + 116904317 MODEL JAAIVD010000024 pseudo 625974986 Trnas-aga transfer RNA serine (anticodon AGA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 6067633 6067701 - 116895136 MODEL JAAIVD010000001 trna 625974987 Slc35e1 solute carrier family 35 member E1 FOUND IN Golgi apparatus (ortholog) 13 14298552 14311453 - 30032202 116915084 MODEL JAAIVD010000008;XM_032919508;XM_032919509 XP_032775399;XP_032775400 protein-coding 625974998 Syndig1 synapse differentiation inducing 1 ENCODES a protein that exhibits glutamate receptor binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN intracellular protein transport (ortholog); positive regulation of synapse assembly (ortholog); regulation of postsynapse assembly (ortholog); FOUND IN cell body (ortholog); dendritic shaft (ortholog); dendritic spine (ortholog) 5 129338338 129506170 + 30032202 116902082 MODEL JAAIVD010000023;XM_032904372;XM_032904374;XM_032904375;XM_032904376;XM_032904377;XM_032904378;XM_032904379;XM_032904380;XM_032904381 XP_032760263;XP_032760265;XP_032760266;XP_032760267;XP_032760268;XP_032760269;XP_032760270;XP_032760271;XP_032760272 synapse differentiation-inducing gene protein 1 protein-coding 625975028 Guca1a guanylate cyclase activator 1A ENCODES a protein that exhibits calcium sensitive guanylate cyclase activator activity (ortholog); guanylate cyclase regulator activity (ortholog); INVOLVED IN phototransduction (ortholog); positive regulation of guanylate cyclase activity (ortholog); visual perception (ortholog); ASSOCIATED WITH cone-rod dystrophy 14 (ortholog); retinitis pigmentosa (ortholog); FOUND IN cone photoreceptor outer segment (ortholog); photoreceptor inner segment (ortholog); photoreceptor outer segment (ortholog) 4 82476542 82486204 + 22301074;30032202 116898041 MODEL JAAIVD010000003;XM_032899433 XP_032755324 guanylyl cyclase-activating protein 1 protein-coding 625975036 Bclaf3 BCLAF1 and THRAP3 family member 3 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); positive regulation of stem cell population maintenance (ortholog); FOUND IN nucleus (ortholog); spliceosomal complex (ortholog) X 33261598 33318446 - 30032202 116888396 MODEL JAAIVD010000014;XM_032889670;XM_032889671;XM_032889672;XM_032889673 XP_032745561;XP_032745562;XP_032745563;XP_032745564 protein-coding 625975059 Pigm phosphatidylinositol glycan anchor biosynthesis class M ENCODES a protein that exhibits dol-P-Man:GlcN-acyl-PI alpha-1,4-mannosyltransferase activity (ortholog); mannosyltransferase activity (ortholog); INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); Glycosylphosphatidylinositol Biosynthesis Defect 1 (ortholog); Venous Thrombosis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); glycosylphosphatidylinositol-mannosyltransferase I complex (ortholog) 10 51490760 51494205 + 22301074;30032202 116911210 MODEL JAAIVD010000005;XM_032915087 XP_032770978 GPI mannosyltransferase 1 protein-coding 625975064 Cdk2ap1 cyclin dependent kinase 2 associated protein 1 ENCODES a protein that exhibits DNA polymerase binding (ortholog); INVOLVED IN face morphogenesis (ortholog); in utero embryonic development (ortholog); regulation of transcription by RNA polymerase II (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 16 29519103 29528039 + 30032202 116885500 MODEL JAAIVD010000004;XM_032886792;XM_032886793 XP_032742683;XP_032742684 cyclin-dependent kinase 2-associated protein 1 protein-coding 625975075 LOC116887868 proteasome subunit beta type-3-like X 47075414 47076025 - 116887868 MODEL JAAIVD010000014 pseudo 625975076 Meltf melanotransferrin ENCODES a protein that exhibits iron ion binding (ortholog); INVOLVED IN iron ion transport (ortholog); negative regulation of substrate adhesion-dependent cell spreading (ortholog); positive regulation of extracellular matrix disassembly (ortholog); ASSOCIATED WITH melanoma (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) 4 16719084 16737642 + 22301074;30032202 116898758 MODEL JAAIVD010000003;XM_032900078 XP_032755969 protein-coding 625975095 LOC116910941 zinc finger protein 883-like 10 75754791 75776326 + 116910941 MODEL JAAIVD010000005 pseudo 625975096 Itfg1 integrin alpha FG-GAP repeat containing 1 17 13191388 13263308 - 30032202 116886612 MODEL JAAIVD010000011;XM_032888122 XP_032744013 T-cell immunomodulatory protein protein-coding 625975109 LOC116900716 BPI fold-containing family A member 2-like 5 133377180 133385758 + 22301074 116900716 MODEL JAAIVD010000023;XM_032902421 XP_032758312 protein-coding 625975121 LOC116914106 small nucleolar RNA SNORA42/SNORA80 family 12 62811944 62812073 + 116914106 MODEL JAAIVD010000007;XR_004389673 snorna 625975124 Clk1 CDC like kinase 1 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN peptidyl-serine phosphorylation (ortholog); peptidyl-threonine phosphorylation (ortholog); peptidyl-tyrosine phosphorylation (ortholog); ASSOCIATED WITH influenza (ortholog); FOUND IN nuclear membrane (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 4 133979656 133991359 + 22301074;30032202 116899430 MODEL JAAIVD010000003;XM_032901183;XM_032901184 XP_032757074;XP_032757075 dual specificity protein kinase CLK1 protein-coding 625975146 Sall3 spalt like transcription factor 3 INVOLVED IN forelimb morphogenesis (ortholog); hindlimb morphogenesis (ortholog); negative regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH Burkitt lymphoma (ortholog); Craniofacial Abnormalities (ortholog); gastrointestinal stromal tumor (ortholog) 15 51252054 51269047 + 30032202 116884766 MODEL JAAIVD010000010;XM_032885983;XM_032885984 XP_032741874;XP_032741875 sal-like protein 3 protein-coding 625975155 LOC116904751 small nucleolar RNA SNORA17 6 61085464 61085587 + 116904751 MODEL JAAIVD010000024 pseudo 625975156 Arhgap32 Rho GTPase activating protein 32 INVOLVED IN cerebellum development (ortholog); positive regulation of axon extension (ortholog); positive regulation of neuron migration (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Ependymomas (ortholog); FOUND IN actin cytoskeleton (ortholog); cell cortex (ortholog); cytosol (ortholog) 8 27709299 27961852 + 22301074;30032202 116906606 MODEL JAAIVD010000027;XM_032909357;XM_032909358;XM_032909360;XM_032909361;XM_032909362;XM_032909363;XM_032909364 XP_032765248;XP_032765249;XP_032765251;XP_032765252;XP_032765253;XP_032765254;XP_032765255 rho GTPase-activating protein 32 protein-coding 625975199 LOC116894881 U6 spliceosomal RNA 2 75355292 75355398 + 116894881 MODEL JAAIVD010000001;XR_004387092 snrna 625975202 LOC116914986 U1 small nuclear ribonucleoprotein C-like 13 24675256 24676796 - 22301074;30032202 116914986 MODEL JAAIVD010000008;XM_032919386 XP_032775277 protein-coding 625975206 Odad3 outer dynein arm docking complex subunit 3 INVOLVED IN cilium movement (ortholog); determination of left/right symmetry (ortholog); outer dynein arm assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); Kartagener syndrome (ortholog); primary ciliary dyskinesia (ortholog); FOUND IN axoneme (ortholog); centriole (ortholog); ciliary basal body (ortholog) 8 18239611 18252948 - 30032202 116908073 MODEL JAAIVD010000027;XM_032911348 XP_032767239 Ccdc151 coiled-coil domain containing 151;coiled-coil domain-containing protein 151 protein-coding 625975223 LOC116894617 vomeronasal type-2 receptor 116-like 2 185817515 185834450 + 22301074;30032202 116894617 MODEL JAAIVD010000001;XM_032896331;XM_032896332 XP_032752222;XP_032752223 protein-coding 625975233 LOC116902839 uncharacterized LOC116902839 6 25473742 25475159 + 116902839 MODEL JAAIVD010000024;XR_004388240 ncrna 625975237 Hoxb8 homeobox B8 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); anterior/posterior pattern specification (ortholog); dorsal spinal cord development (ortholog); ASSOCIATED WITH obsessive-compulsive disorder (ortholog); trichotillomania (ortholog); FOUND IN nucleoplasm (ortholog) 9 58098599 58101984 - 22301074;30032202 116908554 MODEL JAAIVD010000002;XM_032911758;XM_032911759 XP_032767649;XP_032767650 homeobox protein Hox-B8 protein-coding 625975248 LOC116900643 40S ribosomal protein S3a-like 5 111173389 111174195 - 116900643 MODEL JAAIVD010000023 pseudo 625975249 LOC116908398 small nucleolar RNA SNORA17 8 60269541 60269670 - 116908398 MODEL JAAIVD010000027;XR_004388942 snorna 625975252 Ccdc57 coiled-coil domain containing 57 INVOLVED IN axoneme assembly (ortholog); centriole replication (ortholog); cerebrospinal fluid circulation (ortholog); FOUND IN centriolar satellite (ortholog); centriole (ortholog); centrosome (ortholog) 9 63102595 63206175 + 116909857 MODEL JAAIVD010000002;XM_032913584 XP_032769475 coiled-coil domain-containing protein 57 protein-coding 625975275 Barx1 BARX homeobox 1 INVOLVED IN animal organ development (ortholog); anterior/posterior pattern specification (ortholog); cell-cell signaling (ortholog); ASSOCIATED WITH esophagus adenocarcinoma (ortholog) 14 67647846 67651332 + 22301074;30032202 116883978 MODEL JAAIVD010000009;XM_032885210 XP_032741101 homeobox protein BarH-like 1 protein-coding 625975283 LOC116887144 putative deoxyribonuclease TATDN1 18 31998536 31999436 + 30032202 116887144 MODEL JAAIVD010000013;XM_032888693 XP_032744584 protein-coding 625975287 LOC116900422 olfactory receptor 4P4-like 5 70484982 70485908 - 22301074 116900422 MODEL JAAIVD010000023;XM_032902165 XP_032758056 protein-coding 625975290 Csnk2a2ip casein kinase 2 subunit alpha' interacting protein FOUND IN nucleus (ortholog) 4 77926103 77928287 + 116898021 MODEL JAAIVD010000003;XM_032899412 XP_032755303 Csnka2ip casein kinase II subunit alpha'-interacting protein protein-coding 625975293 Tkfc triokinase and FMN cyclase ENCODES a protein that exhibits FAD-AMP lyase (cyclizing) activity (ortholog); glycerone kinase activity (ortholog); triokinase activity (ortholog); INVOLVED IN carbohydrate metabolic process (ortholog); carbohydrate phosphorylation (ortholog); fructose catabolic process to hydroxyacetone phosphate and glyceraldehyde-3-phosphate (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); inherited metabolic disorder (ortholog); Sengers syndrome (ortholog); FOUND IN cytosol (ortholog) 2 10072608 10084976 - 22301074;30032202 116890964 MODEL JAAIVD010000001;XM_032891625 XP_032747516 triokinase/FMN cyclase protein-coding 625975314 Cep57 centrosomal protein 57 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); microtubule binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); protein homooligomerization (ortholog); spermatid development (ortholog); ASSOCIATED WITH genetic disease (ortholog); mosaic variegated aneuploidy syndrome (ortholog); mosaic variegated aneuploidy syndrome 1 (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 9660651 9680946 - 22301074;30032202 116906787 MODEL JAAIVD010000027;XM_032909649 XP_032765540 centrosomal protein of 57 kDa protein-coding 625975329 Ccdc61 coiled-coil domain containing 61 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN centriole assembly (ortholog); mitotic spindle assembly (ortholog); FOUND IN centriolar satellite (ortholog); centriolar subdistal appendage (ortholog); centrosome (ortholog) 2 171713220 171732106 + 30032202 116892561 MODEL JAAIVD010000001;XM_032894339 XP_032750230 coiled-coil domain-containing protein 61 protein-coding 625975347 Gng2 G protein subunit gamma 2 ENCODES a protein that exhibits G-protein beta-subunit binding (ortholog); INVOLVED IN cell population proliferation (ortholog); G protein-coupled receptor signaling pathway (ortholog); positive regulation of epithelial cell migration (ortholog); PARTICIPATES IN eicosanoid signaling pathway; Hedgehog signaling pathway; FOUND IN heterotrimeric G-protein complex (ortholog); synapse (ortholog) 12 89691540 89791008 - 22301074;30032202 116914044 MODEL JAAIVD010000007;XM_032918322;XM_032918323 XP_032774213;XP_032774214 guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 protein-coding 625975358 Racgap1 Rac GTPase activating protein 1 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-tubulin binding (ortholog); gamma-tubulin binding (ortholog); INVOLVED IN actomyosin contractile ring assembly (ortholog); erythrocyte differentiation (ortholog); mitotic cytokinesis (ortholog); ASSOCIATED WITH congenital dyserythropoietic anemia type IIIb (ortholog); hepatocellular carcinoma (ortholog); polycystic ovary syndrome (ortholog); FOUND IN centralspindlin complex (ortholog); cleavage furrow (ortholog); cytoplasmic side of plasma membrane (ortholog) 1 272425695 272454934 - 22301074 116885175 MODEL JAAIVD010000025;XM_032886392 XP_032742283 rac GTPase-activating protein 1 protein-coding 625975379 Tex55 testis expressed 55 FOUND IN nucleus (ortholog); sperm flagellum (ortholog) 4 23745744 23760934 - 30032202 116897992 MODEL JAAIVD010000003;XM_032899394 XP_032755285 testis-specific expressed protein 55 protein-coding 625975385 Cab39 calcium binding protein 39 ENCODES a protein that exhibits kinase binding (ortholog); protein kinase activator activity (ortholog); protein serine/threonine kinase activator activity (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); response to activity (ortholog); response to thyroid hormone (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); hyperthyroidism (ortholog); Lymphatic Metastasis (ortholog); FOUND IN cytoplasm (ortholog); protein-containing complex (ortholog); serine/threonine protein kinase complex (ortholog) 4 157953998 158015389 + 30032202 116899583 MODEL JAAIVD010000003;XM_032901522 XP_032757413 calcium-binding protein 39 protein-coding 625975398 LOC116889689 uncharacterized protein MG323-like 22301074 116889689 MODEL JAAIVD010000052;XM_032890576 XP_032746467 protein-coding 625975399 Lrrc27 leucine rich repeat containing 27 2 62606628 62637295 - 22301074 116891364 MODEL JAAIVD010000001;XM_032892361 XP_032748252 leucine-rich repeat-containing protein 27 protein-coding 625975414 LOC116902275 ATP synthase subunit g, mitochondrial-like 1 32478164 32481625 + 116902275 MODEL JAAIVD010000025 pseudo 625975415 Cd24 CD24 molecule ENCODES a protein that exhibits carbohydrate binding (ortholog); Hsp70 protein binding (ortholog); Hsp90 protein binding (ortholog); INVOLVED IN B cell receptor transport into membrane raft (ortholog); cell activation (ortholog); cell migration (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); multiple sclerosis (ortholog); pancreatic cancer (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); membrane (ortholog) 18 43294265 43299558 + 22301074;30032202 116887029 MODEL JAAIVD010000013;XM_032888521 XP_032744412 signal transducer CD24 protein-coding 625975421 Atp8b1 ATPase phospholipid transporting 8B1 ENCODES a protein that exhibits aminophospholipid flippase activity (ortholog); cardiolipin binding (ortholog); lipid carrier activity (ortholog); INVOLVED IN aminophospholipid transport (ortholog); apical protein localization (ortholog); bile acid and bile salt transport (ortholog); ASSOCIATED WITH benign recurrent intrahepatic cholestasis 1 (ortholog); genetic disease (ortholog); intrahepatic cholestasis (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); endoplasmic reticulum (ortholog) 15 66608902 66744446 + 22301074;30032202 116884444 MODEL JAAIVD010000010;XM_032885539 XP_032741430 phospholipid-transporting ATPase IC protein-coding 625975453 Nup98 nucleoporin 98 and 96 precursor ENCODES a protein that exhibits molecular condensate scaffold activity (ortholog); mRNA binding (ortholog); nuclear localization sequence binding (ortholog); INVOLVED IN nuclear pore complex assembly (ortholog); positive regulation of mRNA splicing, via spliceosome (ortholog); protein import into nucleus (ortholog); PARTICIPATES IN CRM1 export pathway; mRNA nuclear export pathway; ASSOCIATED WITH Acute Erythroleukemia (ortholog); acute myeloid leukemia (ortholog); anemia (ortholog); FOUND IN kinetochore (ortholog); nuclear body (ortholog); nuclear envelope (ortholog) 2 100418214 100506747 - 22301074;30032202 116891783 MODEL JAAIVD010000001;XM_032893127;XM_032893128;XM_032893129;XM_032893130;XM_032893131 XP_032749018;XP_032749019;XP_032749020;XP_032749021;XP_032749022 nuclear pore complex protein Nup98-Nup96 protein-coding 625975502 LOC116904249 uncharacterized LOC116904249 6 124619111 124628333 + 116904249 MODEL JAAIVD010000024;XM_032907207 XP_032763098 uncharacterized protein LOC116904249 protein-coding 625975510 Grik1 glutamate ionotropic receptor kainate type subunit 1 ENCODES a protein that exhibits extracellularly glutamate-gated ion channel activity (ortholog); glutamate binding (ortholog); glutamate-gated calcium ion channel activity (ortholog); INVOLVED IN adult behavior (ortholog); behavioral response to pain (ortholog); excitatory postsynaptic potential (ortholog); PARTICIPATES IN long term potentiation; ASSOCIATED WITH childhood absence epilepsy (ortholog); status epilepticus (ortholog); visual epilepsy (ortholog); FOUND IN dendrite (ortholog); glutamatergic synapse (ortholog); ionotropic glutamate receptor complex (ortholog) 4 55563597 55946907 + 22301074;30032202 116899024 MODEL JAAIVD010000003;XM_032900471;XM_032900472;XM_032900473;XM_032900474;XM_032900475;XM_032900476 XP_032756362;XP_032756363;XP_032756364;XP_032756365;XP_032756366;XP_032756367 glutamate receptor ionotropic, kainate 1 protein-coding 625975539 Abca13 ATP binding cassette subfamily A member 13 INVOLVED IN ceramide transport (ortholog); positive regulation of cholesterol transport (ortholog); positive regulation of synaptic vesicle endocytosis (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); Disease Progression (ortholog); gastric adenocarcinoma (ortholog); FOUND IN intracellular vesicle (ortholog) 11 78232591 78796827 + 22301074;30032202 116912346 MODEL JAAIVD010000006;XM_032916398 XP_032772289 ATP-binding cassette sub-family A member 13 protein-coding 625975603 LOC116900127 olfactory receptor 50-like 5 14466106 14467053 + 22301074;30032202 116900127 MODEL JAAIVD010000023;XM_032901901 XP_032757792 protein-coding 625975606 LOC116907834 eukaryotic translation initiation factor 1-like 8 6657224 6657560 + 116907834 MODEL JAAIVD010000027 pseudo 625975607 LOC116908990 U1 small nuclear ribonucleoprotein C-like 9 39824001 39824442 + 116908990 MODEL JAAIVD010000002 pseudo 625975608 LOC116883959 prolactin-8A9-like 14 46634645 46648616 - 116883959 MODEL JAAIVD010000009 pseudo 625975609 LOC116915167 U6 spliceosomal RNA 13 41786503 41786608 + 116915167 MODEL JAAIVD010000008;XR_004389829 snrna 625975612 LOC116898284 CXXC motif containing zinc binding protein-like 4 167737942 167738280 + 116898284 MODEL JAAIVD010000003 pseudo 625975613 LOC116884946 transmembrane protein 189-like 15 24977983 24979627 - 116884946 MODEL JAAIVD010000010 pseudo 625975614 Wtip WT1 interacting protein ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN miRNA-mediated gene silencing by inhibition of translation (ortholog); miRNA-mediated post-transcriptional gene silencing (ortholog); negative regulation of hippo signaling (ortholog); FOUND IN P-body (ortholog) 2 164546847 164580957 + 30032202 116892286 MODEL JAAIVD010000001;XM_032893883 XP_032749774 Wilms tumor protein 1-interacting protein protein-coding 625975626 LOC116906779 olfactory receptor 147-like 8 32139041 32139997 + 22301074;30032202 116906779 MODEL JAAIVD010000027;XM_032909630 XP_032765521 protein-coding 625975630 Chd8 chromodomain helicase DNA binding protein 8 ENCODES a protein that exhibits armadillo repeat domain binding (ortholog); ATP binding (ortholog); ATP-dependent chromatin remodeler activity (ortholog); INVOLVED IN brain development (ortholog); chromatin remodeling (ortholog); digestive tract development (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN MLL1 complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 12 71633621 71692242 + 22301074 116914027 MODEL JAAIVD010000007;XM_032918291;XM_032918292;XM_032918293;XM_032918294;XM_032918295 XP_032774182;XP_032774183;XP_032774184;XP_032774185;XP_032774186 chromodomain-helicase-DNA-binding protein 8 protein-coding 625975685 LOC116910979 zinc finger protein 431-like 1 215286809 215311864 + 22301074 116910979 MODEL JAAIVD010000025;XM_032914694 XP_032770585 protein-coding 625975693 LOC116910985 zinc finger protein Rlf-like 10 79248014 79254525 + 116910985 MODEL JAAIVD010000005 pseudo 625975694 LOC116904651 U6 spliceosomal RNA 6 1441726 1441816 + 116904651 MODEL JAAIVD010000024 pseudo 625975695 LOC116892710 inorganic pyrophosphatase-like 2 21288600 21289544 + 116892710 MODEL JAAIVD010000001 pseudo 625975696 Csmd2 CUB and Sushi multiple domains 2 INVOLVED IN maintenance of postsynaptic density structure (ortholog); postsynaptic density assembly (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); prostate cancer (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog) 1 29574792 30144390 - 116896414 MODEL JAAIVD010000025;XM_032897562 XP_032753453 CUB and sushi domain-containing protein 2 protein-coding 625975771 LOC116894408 keratin-associated protein 13-1-like 2 158546418 158546995 - 116894408 MODEL JAAIVD010000001;XM_032896114 XP_032752005 protein-coding 625975775 Tspyl4 TSPY like 4 ASSOCIATED WITH melanoma (ortholog) 18 36112055 36116330 - 22301074;30032202 116887083 MODEL JAAIVD010000013;XM_032888592 XP_032744483 testis-specific Y-encoded-like protein 4 protein-coding 625975780 Prr11 proline rich 11 INVOLVED IN regulation of cell cycle (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 9 83683887 83703700 + 30032202 116909375 MODEL JAAIVD010000002;XM_032912929 XP_032768820 proline-rich protein 11 protein-coding 625975794 Tmigd1 transmembrane and immunoglobulin domain containing 1 ENCODES a protein that exhibits cell adhesion mediator activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN brush border assembly (ortholog); cell aggregation (ortholog); cell migration (ortholog); FOUND IN adherens junction (ortholog); cell surface (ortholog); cytoplasm (ortholog) 9 95579264 95594045 + 116909773 MODEL JAAIVD010000002;XM_032913461;XM_032913462;XM_032913463;XM_032913464 XP_032769352;XP_032769353;XP_032769354;XP_032769355 transmembrane and immunoglobulin domain-containing protein 1 protein-coding 625975817 Zcchc18 zinc finger CCHC-type containing 18 X 88868633 88871921 - 30032202 116888671 MODEL JAAIVD010000014;XM_032889967;XM_032889968;XM_032889969;XM_032889970 XP_032745858;XP_032745859;XP_032745860;XP_032745861 zinc finger CCHC domain-containing protein 18 protein-coding 625975834 Znf385a zinc finger protein 385A ENCODES a protein that exhibits p53 binding (ortholog); INVOLVED IN apoptotic process (ortholog); DNA damage response (ortholog); negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); PARTICIPATES IN p53 signaling pathway; FOUND IN chromatin (ortholog); cytosol (ortholog) 1 259744088 259769788 + 22301074;30032202 116883207 MODEL JAAIVD010000025;XM_032884233;XM_032884234;XM_032884238 XP_032740124;XP_032740125;XP_032740129 protein-coding 625975852 LOC116883740 ferritin heavy chain-like 14 16747554 16748380 - 116883740 MODEL JAAIVD010000009 pseudo 625975853 Atp5mc3 ATP synthase membrane subunit c locus 3 ENCODES a protein that exhibits ligand-gated channel activity (ortholog); INVOLVED IN pore complex assembly (ortholog); response to (R)-carnitine (ortholog); response to ethanol (ortholog); ASSOCIATED WITH COVID-19 (ortholog); early-onset dystonia and/or spastic paraplegia (ortholog); genetic disease (ortholog); FOUND IN cation channel complex (ortholog); mitochondrion (ortholog) 5 51261420 51264143 - 22301074;30032202 116901526 MODEL JAAIVD010000023;XM_032903504;XM_032903505 XP_032759395;XP_032759396 ATP synthase F(0) complex subunit C3, mitochondrial protein-coding 625975865 Camk1g calcium/calmodulin dependent protein kinase IG ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); INVOLVED IN protein phosphorylation (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); FOUND IN calcium- and calmodulin-dependent protein kinase complex (ortholog); endomembrane system (ortholog); plasma membrane (ortholog) 10 71330143 71353988 - 22301074;30032202 116911297 MODEL JAAIVD010000005;XM_032915207;XM_032915208 XP_032771098;XP_032771099 calcium/calmodulin-dependent protein kinase type 1G protein-coding 625975884 Rnf207 ring finger protein 207 ENCODES a protein that exhibits Hsp70 protein binding (ortholog); protein-folding chaperone binding (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN positive regulation of gene expression (ortholog); positive regulation of membrane repolarization during ventricular cardiac muscle cell action potential (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog) 1 8423195 8435582 + 22301074;30032202 116892262 MODEL JAAIVD010000025;XM_032893852 XP_032749743 protein-coding 625975905 LOC116900683 cystatin-S-like 5 128708074 128712797 + 22301074;30032202 116900683 MODEL JAAIVD010000023;XM_032902386 XP_032758277 protein-coding 625975910 Pkd1 polycystin 1, transient receptor potential channel interacting ENCODES a protein that exhibits calcium channel activity (ortholog); monoatomic cation channel activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN blood vessel development (ortholog); branching morphogenesis of an epithelial tube (ortholog); calcium ion transmembrane transport (ortholog); ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); Abnormal Cortical Gyration (ortholog); Animal Disease Models (ortholog); FOUND IN basolateral plasma membrane (ortholog); calcium channel complex (ortholog); cation channel complex (ortholog) 9 1832236 1879756 + 22301074 116909158 MODEL JAAIVD010000002;XM_032912645 XP_032768536 polycystin-1 protein-coding 625975961 Mrps31 mitochondrial ribosomal protein S31 ENCODES a protein that exhibits protein domain specific binding (ortholog); FOUND IN mitochondrion (ortholog) 13 64007723 64028177 - 22301074;30032202 116914492 MODEL JAAIVD010000008;XM_032918804 XP_032774695 28S ribosomal protein S31, mitochondrial protein-coding 625975972 LOC116895255 olfactory receptor 2AG1-like 3 310599 311546 + 22301074 116895255 MODEL JAAIVD010000012;XM_032896573 XP_032752464 protein-coding 625975975 Zw10 zw10 kinetochore protein INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); establishment of mitotic spindle orientation (ortholog); Golgi organization (ortholog); ASSOCIATED WITH osteosarcoma (ortholog); FOUND IN cytosol (ortholog); Dsl1/NZR complex (ortholog); endoplasmic reticulum (ortholog) 8 43543801 43568549 + 22301074;30032202 116907121 MODEL JAAIVD010000027;XM_032910094 XP_032765985 centromere/kinetochore protein zw10 homolog protein-coding 625975995 Smarcb1 SWI/SNF related BAF chromatin remodeling complex subunit B1 ENCODES a protein that exhibits ATP-dependent chromatin remodeler activity (ortholog); DNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN blastocyst development (ortholog); blastocyst hatching (ortholog); cell differentiation (ortholog); PARTICIPATES IN SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH atypical teratoid rhabdoid tumor (ortholog); autism spectrum disorder (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN chromatin (ortholog); fibrillar center (ortholog); nBAF complex (ortholog) 18 11525831 11548754 + 22301074;30032202 116886820 MODEL JAAIVD010000013;XM_032888249;XM_032888250 XP_032744140;XP_032744141 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1;SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 protein-coding 625976010 Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 ENCODES a protein that exhibits DNA polymerase binding (ortholog); G-rich strand telomeric DNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN DNA geometric change (ortholog); lung development (ortholog); male gonad development (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); Alzheimer's disease (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN Cajal body (ortholog); catalytic step 2 spliceosome (ortholog); chromatin (ortholog) 6 89625026 89633791 + 22301074 116903817 MODEL JAAIVD010000024;XM_032906520;XM_032906521;XM_032906522;XM_032906523;XM_032906524;XM_032906525;XM_032906526;XM_032906527;XR_004388299;XR_004388300 XP_032762411;XP_032762412;XP_032762413;XP_032762414;XP_032762415;XP_032762416;XP_032762417;XP_032762418 heterogeneous nuclear ribonucleoproteins A2/B1 protein-coding 625976049 Znf691 zinc finger protein 691 1 37775365 37779547 + 30032202 116887107 MODEL JAAIVD010000025;XM_032888645;XM_032888654;XM_032888663 XP_032744536;XP_032744545;XP_032744554 protein-coding 625976061 Lamb2 laminin subunit beta 2 ENCODES a protein that exhibits integrin binding (ortholog); structural constituent of synapse-associated extracellular matrix (ortholog); INVOLVED IN astrocyte development (ortholog); axon extension involved in regeneration (ortholog); axon guidance (ortholog); ASSOCIATED WITH atypical hemolytic-uremic syndrome (ortholog); cognitive disorder (ortholog); Diabetic Nephropathies (ortholog); FOUND IN basement membrane (ortholog); laminin trimer (ortholog); laminin-121 trimer (ortholog) 8 99811972 99824437 + 30032202 116907592 MODEL JAAIVD010000027;XM_032910632 XP_032766523 laminin subunit beta-2 protein-coding 625976098 Mrpl33 mitochondrial ribosomal protein L33 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 7 22541847 22550056 - 22301074;30032202 116905963 MODEL JAAIVD010000026;XM_032908968 XP_032764859 39S ribosomal protein L33, mitochondrial protein-coding 625976106 Neu3 neuraminidase 3 ENCODES a protein that exhibits alpha-sialidase activity (ortholog); exo-alpha-sialidase activity (ortholog); INVOLVED IN carbohydrate metabolic process (ortholog); ganglioside catabolic process (ortholog); negative regulation of clathrin-dependent endocytosis (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); FOUND IN early endosome membrane (ortholog); external side of plasma membrane (ortholog); lysosomal membrane (ortholog) 2 98090758 98101356 - 30032202 116891728 MODEL JAAIVD010000001;XM_032893024;XM_032893025 XP_032748915;XP_032748916 sialidase-3 protein-coding 625976116 Borcs6 BLOC-1 related complex subunit 6 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN lysosome localization (ortholog); ASSOCIATED WITH Fraser syndrome 3 (ortholog); FOUND IN BORC complex (ortholog) 9 48653782 48655752 + 30032202 116909772 MODEL JAAIVD010000002;XM_032913460 XP_032769351 BLOC-1-related complex subunit 6 protein-coding 625976121 Cr2 complement C3d receptor 2 ENCODES a protein that exhibits complement binding (ortholog); complement receptor activity (ortholog); DNA binding (ortholog); INVOLVED IN B cell activation (ortholog); B cell differentiation (ortholog); B cell proliferation (ortholog); ASSOCIATED WITH common variable immunodeficiency (ortholog); common variable immunodeficiency 2 (ortholog); common variable immunodeficiency 7 (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) 10 78706856 78738408 + 116911299 MODEL JAAIVD010000005;XM_032915210;XM_032915211 XP_032771101;XP_032771102 complement receptor type 2 protein-coding 625976151 LOC116887589 butyrophilin subfamily 1 member A1-like 18 7159511 7167457 - 30032202 116887589 MODEL JAAIVD010000013;XM_032889212 XP_032745103 protein-coding 625976162 LOC116910733 U6atac minor spliceosomal RNA 9 3423582 3423707 - 116910733 MODEL JAAIVD010000002;XR_004389251 snrna 625976165 LOC116893583 40S ribosomal protein S23-like 2 229321495 229321950 + 116893583 MODEL JAAIVD010000001 pseudo 625976166 Sh3gl2 SH3 domain containing GRB2 like 2, endophilin A1 ENCODES a protein that exhibits identical protein binding (ortholog); lipid binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to brain-derived neurotrophic factor stimulus (ortholog); dendrite extension (ortholog); lipid tube assembly (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; FOUND IN early endosome (ortholog); glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog) 1 68546762 68721309 - 22301074;30032202 116900537 MODEL JAAIVD010000025;XM_032902267 XP_032758158 endophilin-A1 protein-coding 625976179 Bbox1 gamma-butyrobetaine hydroxylase 1 ENCODES a protein that exhibits gamma-butyrobetaine dioxygenase activity (ortholog); identical protein binding (ortholog); zinc ion binding (ortholog); INVOLVED IN carnitine biosynthetic process (ortholog); PARTICIPATES IN carnitine biosynthetic pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog) 5 88548871 88596069 - 22301074;30032202 116900530 MODEL JAAIVD010000023;XM_032902257 XP_032758148 gamma-butyrobetaine dioxygenase protein-coding 625976191 LOC116894906 small nucleolar RNA SNORA71 2 34224442 34224573 - 116894906 MODEL JAAIVD010000001;XR_004387108 snorna 625976194 Bscl2 BSCL2 lipid droplet biogenesis associated, seipin ENCODES a protein that exhibits phospholipid binding (ortholog); INVOLVED IN adipose tissue development (ortholog); cytosolic lipolysis (ortholog); fat cell differentiation (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); Asthenozoospermia (ortholog); autosomal dominant distal hereditary motor neuronopathy 13 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); lipid droplet (ortholog) 2 9098005 9109758 - 22301074;30032202 116890921 MODEL JAAIVD010000001;XM_032891554;XM_032891555;XM_032891556 XP_032747445;XP_032747446;XP_032747447 seipin protein-coding 625976217 LOC116914927 60S ribosomal protein L34-like 13 6222491 6223042 + 116914927 MODEL JAAIVD010000008 pseudo 625976218 Dbndd2 dysbindin domain containing 2 ENCODES a protein that exhibits ATPase binding (ortholog); INVOLVED IN apoptotic process (ortholog); ERK1 and ERK2 cascade (ortholog); monoatomic ion homeostasis (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); lysosome (ortholog) 5 153474942 153501787 - 22301074;30032202 116902359 MODEL JAAIVD010000023;XM_032904849;XM_032904850;XM_032904851;XM_032904852;XM_032904853 XP_032760740;XP_032760741;XP_032760742;XP_032760743;XP_032760744 dysbindin domain-containing protein 2 protein-coding 625976237 Alkal2 ALK and LTK ligand 2 ENCODES a protein that exhibits cytokine activity (ortholog); receptor signaling protein tyrosine kinase activator activity (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN adipose tissue development (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); energy homeostasis (ortholog); FOUND IN extracellular region (ortholog) 7 44283661 44293334 + 22301074;30032202 116904941 MODEL JAAIVD010000026;XM_032907585;XM_032907586 XP_032763476;XP_032763477 protein-coding 625976251 Timp1 TIMP metallopeptidase inhibitor 1 ENCODES a protein that exhibits cytokine activity (ortholog); metalloendopeptidase inhibitor activity (ortholog); peptidase inhibitor activity (ortholog); INVOLVED IN cartilage development (ortholog); cellular response to acetaldehyde (ortholog); cellular response to peptide (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; ASSOCIATED WITH adrenoleukodystrophy (ortholog); adult respiratory distress syndrome (ortholog); alcoholic liver cirrhosis (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) X 2777611 2782506 + 22301074;30032202 116889399 MODEL JAAIVD010000014;XM_032890503;XM_032890504;XM_032890505;XM_032890506 XP_032746394;XP_032746395;XP_032746396;XP_032746397 metalloproteinase inhibitor 1 protein-coding 625976272 LOC116900470 olfactory receptor 4A5-like 5 71439886 71440830 - 22301074 116900470 MODEL JAAIVD010000023;XM_032902206 XP_032758097 protein-coding 625976275 Snx32 sorting nexin 32 INVOLVED IN endosomal transport (ortholog); endosome to lysosome transport via multivesicular body sorting pathway (ortholog); neuron projection extension (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); COVID-19 (ortholog); FOUND IN early endosome (ortholog); late endosome (ortholog); plasma membrane (ortholog) 2 2162851 2180581 + 22301074;30032202 116890710 MODEL JAAIVD010000001;XM_032891146;XM_032891147;XM_032891148;XM_032891149;XM_032891150;XM_032891151 XP_032747037;XP_032747038;XP_032747039;XP_032747040;XP_032747041;XP_032747042 sorting nexin-32 protein-coding 625976308 LOC116903125 solute carrier organic anion transporter family member 1A4 6 7344779 7394222 - 22301074;30032202 116903125 MODEL JAAIVD010000024;XM_032905477 XP_032761368 protein-coding 625976327 Npnt nephronectin ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN branching involved in ureteric bud morphogenesis (ortholog); cell-cell adhesion mediated by integrin (ortholog); cell-matrix adhesion (ortholog); ASSOCIATED WITH bilateral renal aplasia (ortholog); renal agenesis (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) 3 25960569 26032001 + 22301074 116896236 MODEL JAAIVD010000012;XM_032897299;XM_032897300;XM_032897301;XM_032897302 XP_032753190;XP_032753191;XP_032753192;XP_032753193 protein-coding 625976350 LOC116888679 40S ribosomal protein S2-like X 3254550 3255296 + 116888679 MODEL JAAIVD010000014 pseudo 625976351 LOC116911886 U6 spliceosomal RNA 10 9499475 9499569 + 116911886 MODEL JAAIVD010000005 pseudo 625976352 Daglb diacylglycerol lipase beta ENCODES a protein that exhibits lipase activity (ortholog); monoacylglycerol lipase activity (ortholog); triacylglycerol lipase activity (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); cannabinoid biosynthetic process (ortholog); icosanoid metabolic process (ortholog); PARTICIPATES IN N-cadherin signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); FOUND IN plasma membrane (ortholog) 16 9646453 9688453 - 22301074 116885483 MODEL JAAIVD010000004;XM_032886772;XM_032886773 XP_032742663;XP_032742664 sn1-specific diacylglycerol lipase beta protein-coding 625976377 Ggact gamma-glutamylamine cyclotransferase ENCODES a protein that exhibits gamma-glutamylaminecyclotransferase activity (ortholog); INVOLVED IN modified amino acid catabolic process (ortholog) 12 2004355 2005323 + 30032202 116913624 MODEL JAAIVD010000007;XM_032917888 XP_032773779 gamma-glutamylaminecyclotransferase protein-coding 625976382 LOC116887654 60S acidic ribosomal protein P0-like 18 21280655 21282916 - 116887654 MODEL JAAIVD010000013 pseudo 625976383 Phf20 PHD finger protein 20 ASSOCIATED WITH Dwarfism (ortholog); FOUND IN histone acetyltransferase complex (ortholog); MLL1 complex (ortholog); nuclear membrane (ortholog) 5 135553830 135658973 + 22301074;30032202 116902201 MODEL JAAIVD010000023;XM_032904579 XP_032760470 protein-coding 625976405 Rnase13 ribonuclease A family member 13 (inactive) 12 71975317 71975915 + 30032202 116913977 MODEL JAAIVD010000007;XM_032918249 XP_032774140 probable inactive ribonuclease-like protein 13 protein-coding 625976410 Trnaq-uug transfer RNA glutamine (anticodon UUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42541063 42541134 + 116884240 MODEL JAAIVD010000009 trna 625976411 LOC116906481 small nucleolar RNA SNORA40 7 95696248 95696368 + 116906481 MODEL JAAIVD010000026 pseudo 625976412 LOC116888239 60S ribosomal protein L9-like 1 78958876 78959467 - 116888239 MODEL JAAIVD010000025 pseudo 625976413 Dolk dolichol kinase ENCODES a protein that exhibits dolichol kinase activity (ortholog); INVOLVED IN dolichyl monophosphate biosynthetic process (ortholog); ASSOCIATED WITH congenital disorder of glycosylation Im (ortholog); dilated cardiomyopathy (ortholog); hypertrophic cardiomyopathy 26 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); nucleolus (ortholog) 5 5344330 5346430 + 30032202 116901187 MODEL JAAIVD010000023;XM_032902871 XP_032758762 protein-coding 625976418 LOC116910642 U6 spliceosomal RNA 9 83357397 83357500 + 116910642 MODEL JAAIVD010000002;XR_004389179 snrna 625976421 Rad21 RAD21 cohesin complex component ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription factor binding (ortholog); lncRNA binding (ortholog); INVOLVED IN chromatin looping (ortholog); negative regulation of G2/M transition of mitotic cell cycle (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH Cerebral Hemorrhage (ortholog); colorectal carcinoma (ortholog); Cornelia de Lange syndrome (ortholog); FOUND IN chromatin (ortholog); chromosome, centromeric region (ortholog); cohesin complex (ortholog) 1 226305500 226332431 + 22301074;30032202 116911365 MODEL JAAIVD010000025;XM_032915295 XP_032771186 double-strand-break repair protein rad21 homolog protein-coding 625976439 LOC116904718 U1 spliceosomal RNA 6 76563463 76563613 + 116904718 MODEL JAAIVD010000024 pseudo 625976440 LOC116906142 chromobox protein homolog 1-like 7 92495500 92499318 - 116906142 MODEL JAAIVD010000026 pseudo 625976441 LOC116908231 transcription initiation factor IIA subunit 2-like 8 82809799 82810479 - 116908231 MODEL JAAIVD010000027 pseudo 625976442 Bbs7 Bardet-Biedl syndrome 7 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN brain development (ortholog); eye development (ortholog); fat cell differentiation (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl Syndrome 1/7, Digenic (ortholog); FOUND IN axoneme (ortholog); BBSome (ortholog); centrosome (ortholog) 3 117374255 117413920 + 22301074;30032202 116896926 MODEL JAAIVD010000012;XM_032898495 XP_032754386 Bardet-Biedl syndrome 7 protein protein-coding 625976466 Add2 adducin 2 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); cytoskeletal anchor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); barbed-end actin filament capping (ortholog); ASSOCIATED WITH hereditary spherocytosis type 1 (ortholog); hypertension (ortholog); IgA glomerulonephritis (ortholog); FOUND IN cytoplasmic vesicle (ortholog); F-actin capping protein complex (ortholog); glutamatergic synapse (ortholog) 6 60203871 60238746 - 30032202 116903558 MODEL JAAIVD010000024;XM_032906175 XP_032762066 beta-adducin protein-coding 625976484 Il9r interleukin 9 receptor ENCODES a protein that exhibits interleukin-9 binding (ortholog); interleukin-9 receptor activity (ortholog); INVOLVED IN B cell differentiation (ortholog); B cell proliferation (ortholog); immunoglobulin mediated immune response (ortholog); ASSOCIATED WITH asthma (ortholog); Brain Injuries (ortholog); cystic fibrosis (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) 9 3686394 3695671 + 22301074;30032202 116910504 MODEL JAAIVD010000002;XM_032914400;XM_032914401 XP_032770291;XP_032770292 interleukin-9 receptor protein-coding 625976498 LOC116912436 S-adenosylmethionine decarboxylase proenzyme-like 11 76892855 76893319 - 22301074;30032202 116912436 MODEL JAAIVD010000006;XM_032916504 XP_032772395 protein-coding 625976502 Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha ENCODES a protein that exhibits BAT3 complex binding (ortholog); identical protein binding (ortholog); INVOLVED IN ERAD pathway (ortholog); negative regulation of ERAD pathway (ortholog); negative regulation of ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extrinsic component of synaptic vesicle membrane (ortholog) 1 153827879 153844654 + 22301074;30032202 116904602 MODEL JAAIVD010000025;XM_032907402;XM_032907405 XP_032763293;XP_032763296 small glutamine rich tetratricopeptide repeat containing alpha;small glutamine-rich tetratricopeptide repeat-containing protein alpha protein-coding 625976520 Lrguk leucine rich repeats and guanylate kinase domain containing INVOLVED IN axoneme assembly (ortholog); spermatogenesis (ortholog); FOUND IN acrosomal vesicle (ortholog); manchette (ortholog) 6 105554894 105661575 - 22301074;30032202 116903986 MODEL JAAIVD010000024;XM_032906791 XP_032762682 leucine-rich repeat and guanylate kinase domain-containing protein protein-coding 625976544 LOC116897964 caspase-6-like 4 20645978 20650968 - 116897964 MODEL JAAIVD010000003 pseudo 625976545 Ufsp1 UFM1 specific peptidase 1 ENCODES a protein that exhibits cysteine-type peptidase activity (ortholog); deUFMylase activity (ortholog); INVOLVED IN protein maturation (ortholog); protein ufmylation (ortholog); FOUND IN cytosol (ortholog) 16 16736494 16737631 - 116885202 MODEL JAAIVD010000004;XM_032886434 XP_032742325 UFM1 specific peptidase 1 (inactive);inactive Ufm1-specific protease 1 protein-coding 625976550 Dlx6 distal-less homeobox 6 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); embryonic limb morphogenesis (ortholog); epithelial cell differentiation (ortholog); ASSOCIATED WITH Craniofacial Abnormalities (ortholog); split hand-foot malformation 1 (ortholog); Weissenbacher-Zweymuller syndrome (ortholog) 6 131814929 131819391 - 22301074;30032202 116904089 MODEL JAAIVD010000024;XM_032906960 XP_032762851 homeobox protein DLX-6 protein-coding 625976557 Ufl1 UFM1 specific ligase 1 ENCODES a protein that exhibits protein kinase binding (ortholog); UFM1 ligase activity (ortholog); INVOLVED IN DNA damage checkpoint signaling (ortholog); DNA damage response (ortholog); erythrocyte differentiation (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 1 152369587 152402671 - 22301074;30032202 116904139 MODEL JAAIVD010000025;XM_032907031 XP_032762922 E3 UFM1-protein ligase 1 protein-coding 625976580 LOC116887666 vacuolar protein-sorting-associated protein 36-like 18 28612613 28646063 + 116887666 MODEL JAAIVD010000013 pseudo 625976581 LOC116896918 60S ribosomal protein L29-like 3 116458279 116458749 + 116896918 MODEL JAAIVD010000012 pseudo 625976582 Znf687 zinc finger protein 687 ASSOCIATED WITH Paget's disease of bone (ortholog); Paget's disease of bone 6 (ortholog); FOUND IN nucleoplasm (ortholog) 3 62232232 62241214 + 116896573 MODEL JAAIVD010000012;XM_032897784;XM_032897785;XM_032897786;XM_032897787 XP_032753675;XP_032753676;XP_032753677;XP_032753678 protein-coding 625976606 Hydin HYDIN axonemal central pair apparatus protein INVOLVED IN axonemal central apparatus assembly (ortholog); brain development (ortholog); cilium movement (ortholog); ASSOCIATED WITH Asthenozoospermia (ortholog); genetic disease (ortholog); hydrocephalus (ortholog); FOUND IN axonemal central apparatus (ortholog); axonemal central pair projection (ortholog); cilium (ortholog) 17 29968133 30319264 + 30032202 116886165 MODEL JAAIVD010000011;XM_032887538 XP_032743429 hydrocephalus-inducing protein homolog protein-coding 625976697 Mybpc1 myosin binding protein C1 ENCODES a protein that exhibits myosin binding (ortholog); ASSOCIATED WITH congenital myopathy 16 (ortholog); distal arthrogryposis (ortholog); distal arthrogryposis type 1B (ortholog) 1 167593897 167681383 - 22301074 116907801 MODEL JAAIVD010000025;XM_032910951 XP_032766842 myosin-binding protein C, slow-type protein-coding 625976727 Hmx2 H6 family homeobox 2 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN brain development (ortholog); inner ear morphogenesis (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH High Myopia (ortholog) 2 70297741 70299643 - 22301074;30032202 116893881 MODEL JAAIVD010000001;XM_032895603 XP_032751494 homeobox protein HMX2 protein-coding 625976732 Cebpb CCAAT enhancer binding protein beta ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); cellular response to amino acid stimulus (ortholog); cellular response to interleukin-1 (ortholog); PARTICIPATES IN forkhead class A signaling pathway; interleukin-3 signaling pathway; interleukin-4 signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Alzheimer's disease (ortholog); Bacteremia (ortholog); FOUND IN C/EBP complex (ortholog); CHOP-C/EBP complex (ortholog); chromatin (ortholog) 5 150315288 150316758 - 30032202 116902306 MODEL JAAIVD010000023;XM_032904751 XP_032760642 CCAAT/enhancer-binding protein beta protein-coding 625976737 Nanos3 nanos C2HC-type zinc finger 3 ENCODES a protein that exhibits enzyme activator activity (ortholog); RNA binding (ortholog); INVOLVED IN germ cell development (ortholog); mRNA destabilization (ortholog); negative regulation of apoptotic signaling pathway (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) 17 16109834 16118066 + 30032202 116886537 MODEL JAAIVD010000011;XM_032888056;XR_004386109 XP_032743947 nanos homolog 3 protein-coding 625976746 Gmnc geminin coiled-coil domain containing ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN cerebrospinal fluid circulation (ortholog); cilium assembly (ortholog); DNA replication (ortholog) 4 13281996 13290237 + 30032202 116897857 MODEL JAAIVD010000003;XM_032899265 XP_032755156 geminin coiled-coil domain-containing protein 1 protein-coding 625976755 Tbrg1 transforming growth factor beta regulator 1 INVOLVED IN DNA replication (ortholog); negative regulation of cell population proliferation (ortholog); protein localization to nucleoplasm (ortholog); ASSOCIATED WITH intellectual disability (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 8 33810844 33818305 - 22301074;30032202 116906659 MODEL JAAIVD010000027;XM_032909444 XP_032765335 protein-coding 625976768 LOC116888207 60S ribosome subunit biogenesis protein NIP7 homolog X 127020658 127024298 + 116888207 MODEL JAAIVD010000014 pseudo 625976769 Pdgfc platelet derived growth factor C ENCODES a protein that exhibits platelet-derived growth factor receptor binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN activation of transmembrane receptor protein tyrosine kinase activity (ortholog); animal organ morphogenesis (ortholog); bone development (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); Mesothelioma (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); extracellular region (ortholog) 3 72320097 72500390 - 22301074;30032202 116896754 MODEL JAAIVD010000012;XM_032898198 XP_032754089 platelet-derived growth factor C protein-coding 625976779 LOC116902738 uncharacterized LOC116902738 6 58588042 58589039 + 116902738 MODEL JAAIVD010000024;XR_004388234 ncrna 625976783 LOC116911649 60S ribosomal protein L28-like 10 37035923 37036384 + 116911649 MODEL JAAIVD010000005 pseudo 625976784 Cfap276 cilia and flagella associated protein 276 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease intermediate type (ortholog); FOUND IN axonemal B tubule inner sheath (ortholog); axonemal microtubule (ortholog); cytoplasm (ortholog) 3 49717411 49724662 - 116895361 MODEL JAAIVD010000012;XM_032896658 XP_032752549 C3H1orf194 chromosome 3 C1orf194 homolog;protein C1orf194 homolog protein-coding 625976793 LOC116893403 argininosuccinate synthase-like 2 173179580 173183799 - 116893403 MODEL JAAIVD010000001 pseudo 625976794 LOC116894979 small nucleolar RNA SNORA41 2 215702955 215703095 - 116894979 MODEL JAAIVD010000001;XR_004387170 snorna 625976797 Pld2 phospholipase D2 ENCODES a protein that exhibits D-type glycerophospholipase activity (ortholog); protein kinase C binding (ortholog); INVOLVED IN cellular response to phorbol 13-acetate 12-myristate (ortholog); G protein-coupled receptor internalization (ortholog); neuron projection development (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; glycerophospholipid metabolic pathway; mTOR signaling pathway; ASSOCIATED WITH Cardiomegaly (ortholog); congestive heart failure (ortholog); Experimental Seizures (ortholog); FOUND IN brush border membrane (ortholog); caveola (ortholog); lamellipodium (ortholog) 9 50154899 50171322 + 22301074;30032202 116909527 MODEL JAAIVD010000002;XM_032913135 XP_032769026 protein-coding 625976826 Csf3r colony stimulating factor 3 receptor ENCODES a protein that exhibits granulocyte colony-stimulating factor binding (ortholog); INVOLVED IN amelogenesis (ortholog); neutrophil chemotaxis (ortholog); regulation of myeloid cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); bacterial pneumonia (ortholog); chronic myelomonocytic leukemia (ortholog) 1 32256795 32275611 - 22301074;30032202 116887008 MODEL JAAIVD010000025;XM_032888497 XP_032744388 granulocyte colony-stimulating factor receptor protein-coding 625976847 Dppa2 developmental pluripotency associated 2 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN epigenetic regulation of gene expression (ortholog); lung-associated mesenchyme development (ortholog); positive regulation of stem cell proliferation (ortholog); ASSOCIATED WITH primary ovarian insufficiency (ortholog); FOUND IN nucleus (ortholog) 4 32824012 32831008 + 30032202 116897895 MODEL JAAIVD010000003;XM_032899301 XP_032755192 developmental pluripotency-associated protein 2 protein-coding 625976856 LOC116913609 olfactory receptor 1537-like 12 269364 270323 - 22301074;30032202 116913609 MODEL JAAIVD010000007;XM_032917861 XP_032773752 protein-coding 625976859 LOC116895894 60S ribosomal protein L26-like 3 116172859 116180508 + 116895894 MODEL JAAIVD010000012 pseudo 625976860 Prss58 serine protease 58 6 41739979 41744030 - 22301074 116902696 MODEL JAAIVD010000024;XM_032905052 XP_032760943 protein-coding 625976868 LOC116898898 guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5-like 4 40128359 40128639 - 116898898 MODEL JAAIVD010000003 pseudo 625976869 LOC116907275 olfactory receptor 867-like 8 16159756 16160660 + 116907275 MODEL JAAIVD010000027 pseudo 625976870 LOC116887105 keratin-associated protein 10-3-like 18 1132896 1133624 - 22301074;30032202 116887105 MODEL JAAIVD010000013;XM_032888638;XM_032888639 XP_032744529;XP_032744530 keratin-associated protein 10-11-like protein-coding 625976876 Exoc3l1 exocyst complex component 3 like 1 INVOLVED IN exocytosis (ortholog); peptide hormone secretion (ortholog); FOUND IN exocyst (ortholog); secretory granule (ortholog) 17 25016534 25032641 - 22301074;30032202 116886373 MODEL JAAIVD010000011;XM_032887837 XP_032743728 exocyst complex component 3-like protein protein-coding 625976894 LOC116906333 U6 spliceosomal RNA 7 25641756 25641845 - 116906333 MODEL JAAIVD010000026 pseudo 625976895 Rgcc regulator of cell cycle ENCODES a protein that exhibits kinase activator activity (ortholog); protein kinase activator activity (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); complement receptor mediated signaling pathway (ortholog); fibroblast activation (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Myocardial Ischemia (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nucleolus (ortholog) 12 45057701 45070287 + 22301074;30032202 116913752 MODEL JAAIVD010000007;XM_032918058 XP_032773949 regulator of cell cycle RGCC protein-coding 625976904 LOC116899946 U2 spliceosomal RNA 4 180783529 180783677 - 116899946 MODEL JAAIVD010000003 pseudo 625976905 LOC116902634 small nucleolar RNA SNORD11B 5 6641436 6641515 - 116902634 MODEL JAAIVD010000023;XR_004388211 snorna 625976908 LOC116888918 protein scribble homolog X 53156542 53162386 + 116888918 MODEL JAAIVD010000014 pseudo 625976909 Akna AT-hook transcription factor INVOLVED IN delamination (ortholog); epithelial to mesenchymal transition (ortholog); neuroblast delamination (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); fibrillar center (ortholog) 1 90184299 90223257 + 30032202 116901283 MODEL JAAIVD010000025;XM_032903069 XP_032758960 microtubule organization protein AKNA protein-coding 625976935 Kiaa1191 KIAA1191 ortholog FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) 14 72893153 72905488 - 30032202 116915205 MODEL JAAIVD010000009;XM_032919571;XM_032919572;XM_032919573;XM_032919574;XM_032919575 XP_032775462;XP_032775463;XP_032775464;XP_032775465;XP_032775466 putative monooxygenase p33MONOX protein-coding 625976961 Irak1 interleukin 1 receptor associated kinase 1 ENCODES a protein that exhibits heat shock protein binding (ortholog); identical protein binding (ortholog); interleukin-1 receptor binding (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); cellular response to heat (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH ankylosing spondylitis (ortholog); asthma (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); lipid droplet (ortholog) X 128545848 128555519 + 22301074;30032202 116888497 MODEL JAAIVD010000014;XM_032889781 XP_032745672 interleukin-1 receptor-associated kinase 1 protein-coding 625976980 LOC116914318 calcium-binding and coiled-coil domain-containing protein 2-like 13 44078651 44080046 - 116914318 MODEL JAAIVD010000008 pseudo 625976981 Saysd1 SAYSVFN motif domain containing 1 ENCODES a protein that exhibits UFM1-modified protein reader activity (ortholog); INVOLVED IN protein quality control for misfolded or incompletely synthesized proteins (ortholog); rescue of stalled cytosolic ribosome (ortholog); FOUND IN endoplasmic reticulum (ortholog) 12 89882162 89887833 - 116913776 MODEL JAAIVD010000007;XM_032918081 XP_032773972 SAYSvFN domain-containing protein 1 protein-coding 625976987 LOC116884689 protein transport protein Sec61 subunit gamma-like 15 3243509 3243704 + 116884689 MODEL JAAIVD010000010 pseudo 625976988 LOC116888768 gamma-aminobutyric acid receptor-associated protein-like 2 X 23763238 23763747 + 116888768 MODEL JAAIVD010000014 pseudo 625976989 LOC116900419 olfactory receptor 4P4-like 5 70427123 70428052 - 22301074 116900419 MODEL JAAIVD010000023;XM_032902163 XP_032758054 protein-coding 625976992 Cnih2 cornichon family AMPA receptor auxiliary protein 2 INVOLVED IN localization within membrane (ortholog); negative regulation of anterograde synaptic vesicle transport (ortholog); negative regulation of receptor localization to synapse (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); dendrite (ortholog); dendritic shaft (ortholog) 2 2553190 2558848 + 22301074;30032202 116890737 MODEL JAAIVD010000001;XM_032891194;XM_032891195 XP_032747085;XP_032747086 protein cornichon homolog 2 protein-coding 625977005 LOC116914340 histone H2B type 1-H-like 13 50783296 50791484 + 116914340 MODEL JAAIVD010000008 pseudo 625977006 LOC116897407 U6 spliceosomal RNA 3 196100470 196100576 - 116897407 MODEL JAAIVD010000012;XR_004387450 snrna 625977009 Trnaa-cgc transfer RNA alanine (anticodon CGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42441825 42441896 - 116884185 MODEL JAAIVD010000009 trna 625977010 LOC116899984 U2 small nuclear ribonucleoprotein B''-like 5 141627539 141631106 - 116899984 MODEL JAAIVD010000023 pseudo 625977011 Defb128 defensin beta 128 INVOLVED IN defense response to Gram-negative bacterium (ortholog); defense response to Gram-positive bacterium (ortholog) 5 131799302 131802086 + 22301074 116900694 MODEL JAAIVD010000023;XM_032902397 XP_032758288 beta-defensin 128 protein-coding 625977015 Cnksr1 connector enhancer of kinase suppressor of Ras 1 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT2 receptor; interleukin-3 signaling pathway; ASSOCIATED WITH intellectual disability (ortholog); Neurodevelopmental Disorders (ortholog); Usher syndrome type 2C (ortholog); FOUND IN cell cortex (ortholog) 1 24005740 24016635 + 22301074 116894818 MODEL JAAIVD010000025;XM_032896493 XP_032752384 protein-coding 625977040 Ncapd3 non-SMC condensin II complex subunit D3 ENCODES a protein that exhibits histone H4K20me1 reader activity (ortholog); INVOLVED IN cerebral cortex development (ortholog); meiotic chromosome separation (ortholog); mitotic chromosome condensation (ortholog); ASSOCIATED WITH intellectual disability (ortholog); primary autosomal recessive microcephaly 22 (ortholog); FOUND IN condensed chromosome (ortholog); condensed nuclear chromosome (ortholog); condensin complex (ortholog) 8 22923814 22991550 + 22301074;30032202 116908038 MODEL JAAIVD010000027;XM_032911311 XP_032767202 condensin-2 complex subunit D3 protein-coding 625977079 LOC116885342 PRELI domain-containing protein 1, mitochondrial-like 1 33580172 33580985 - 116885342 MODEL JAAIVD010000025 pseudo 625977080 Ralgps1 Ral GEF with PH domain and SH3 binding motif 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN regulation of Ral protein signal transduction (ortholog); ASSOCIATED WITH urinary bladder cancer (ortholog) 5 2265024 2499438 + 22301074;30032202 116901122 MODEL JAAIVD010000023;XM_032902700;XM_032902701;XM_032902703;XM_032902704;XM_032902705;XM_032902706 XP_032758591;XP_032758592;XP_032758594;XP_032758595;XP_032758596;XP_032758597 ras-specific guanine nucleotide-releasing factor RalGPS1 protein-coding 625977116 LOC116894003 olfactory receptor 51G1-like 2 101636981 101637938 + 22301074 116894003 MODEL JAAIVD010000001;XM_032895719 XP_032751610 protein-coding 625977119 LOC116904914 uncharacterized LOC116904914 7 38234909 38235902 + 116904914 MODEL JAAIVD010000026;XR_004388476 ncrna 625977123 Ccdc92b coiled-coil domain containing 92B 9 93352951 93374244 + 116909892 MODEL JAAIVD010000002;XM_032913638;XM_032913639 XP_032769529;XP_032769530 protein-coding 625977134 LOC116893276 carcinoembryonic antigen-related cell adhesion molecule 3-like 2 144368934 144395529 - 22301074;30032202 116893276 MODEL JAAIVD010000001;XM_032895121 XP_032751012 protein-coding 625977143 LOC116883234 40S ribosomal protein S3a-like 14 58760993 58761580 + 116883234 MODEL JAAIVD010000009 pseudo 625977144 LOC116910009 proteasome subunit beta type-3-like 9 34458367 34458987 - 116910009 MODEL JAAIVD010000002 pseudo 625977145 LOC116909306 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4-like 9 91767543 91768333 + 116909306 MODEL JAAIVD010000002 pseudo 625977146 LOC116914870 uncharacterized LOC116914870 13 14364441 14365226 + 116914870 MODEL JAAIVD010000008;XR_004389781 ncrna 625977150 LOC116895347 pancreatic alpha-amylase-like 3 46108034 46116475 + 116895347 MODEL JAAIVD010000012 pseudo 625977151 LOC116914583 uncharacterized LOC116914583 13 69267210 69680553 - 116914583 MODEL JAAIVD010000008;XR_004389755 ncrna 625977157 Tll1 tolloid like 1 ENCODES a protein that exhibits collagen binding (ortholog); ASSOCIATED WITH atrial heart septal defect 6 (ortholog); congenital heart disease (ortholog); coronary artery disease (ortholog) 13 24882031 25070285 + 22301074 116914791 MODEL JAAIVD010000008;XM_032919237 XP_032775128 tolloid-like protein 1 protein-coding 625977182 LOC116899977 protein FAM162A-like 5 133814768 133815181 - 116899977 MODEL JAAIVD010000023 pseudo 625977183 Rad52 RAD52 DNA repair protein ENCODES a protein that exhibits DNA binding (ortholog); identical protein binding (ortholog); single-stranded DNA binding (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); DNA double-strand break processing involved in repair via single-strand annealing (ortholog); DNA recombination (ortholog); ASSOCIATED WITH colon cancer (ortholog); colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleus (ortholog); protein-containing complex (ortholog); protein-DNA complex (ortholog) 6 26823788 26833471 - 22301074;30032202 116903337 MODEL JAAIVD010000024;XM_032905785;XM_032905786 XP_032761676;XP_032761677 DNA repair protein RAD52 homolog;RAD52 homolog, DNA repair protein protein-coding 625977199 Prkcb protein kinase C beta ENCODES a protein that exhibits calcium channel regulator activity (ortholog); calcium,diacylglycerol-dependent serine/threonine kinase activity (ortholog); chromatin binding (ortholog); INVOLVED IN B cell activation (ortholog); B cell receptor signaling pathway (ortholog); calcium ion transport (ortholog); PARTICIPATES IN insulin signaling pathway; interleukin-2 signaling pathway; protein kinase C (PKC) signaling pathway; ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); Alzheimer's disease (ortholog); autistic disorder (ortholog); FOUND IN brush border membrane (ortholog); calyx of Held (ortholog); centrosome (ortholog) 2 79220402 79556347 - 22301074 116891553 MODEL JAAIVD010000001;XM_032892723;XM_032892724 XP_032748614;XP_032748615 protein kinase C beta type protein-coding 625977225 LOC116887203 heat shock 70 kDa protein 1A-like 18 7565264 7568166 - 22301074;30032202 116887203 MODEL JAAIVD010000013;XM_032888760 XP_032744651 protein-coding 625977230 Dpt dermatopontin ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); INVOLVED IN cell adhesion (ortholog); collagen fibril organization (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH lung adenocarcinoma (ortholog); sensorineural hearing loss (ortholog); varicose veins (ortholog) 10 43980576 44009720 + 30032202 116911674 MODEL JAAIVD010000005;XM_032915628 XP_032771519 protein-coding 625977238 Slc67a1 solute carrier family 67 member 1 ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN xenobiotic detoxification by transmembrane export across the plasma membrane (ortholog); xenobiotic transport (ortholog); ASSOCIATED WITH breast adenocarcinoma (ortholog); breast cancer (ortholog); Breast Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); nuclear envelope (ortholog) 2 6200664 6225923 - 22301074;30032202 116890833 MODEL JAAIVD010000001;XM_032891354 XP_032747245 Slc22a18 solute carrier family 22 member 18 protein-coding 625977253 LOC116908167 uncharacterized LOC116908167 8 45570069 45583150 - 116908167 MODEL JAAIVD010000027;XM_032911465 XP_032767356 uncharacterized protein LOC116908167 protein-coding 625977265 Nme5 NME/NM23 family member 5 ENCODES a protein that exhibits 3'-5'-DNA exonuclease activity (ortholog); nucleoside diphosphate kinase activity (ortholog); INVOLVED IN cilium assembly (ortholog); DNA catabolic process (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ASSOCIATED WITH hydrocephalus (ortholog); Primary Ciliary Dyskinesia 48 (ortholog); FOUND IN 9+2 motile cilium (ortholog); radial spoke (ortholog); sperm flagellum (ortholog) 15 9780415 9796660 + 22301074;30032202 116884810 MODEL JAAIVD010000010;XM_032886041;XM_032886042 XP_032741932;XP_032741933 nucleoside diphosphate kinase homolog 5 protein-coding 625977278 LOC116884047 spermatogenesis-associated protein 31D4-like 14 78408317 78413907 - 116884047 MODEL JAAIVD010000009;XM_032885293 XP_032741184 protein-coding 625977284 Ermn ermin ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN actin filament organization (ortholog); morphogenesis of a branching structure (ortholog); regulation of cell projection organization (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); filopodium (ortholog) 5 35877012 35882539 - 22301074;30032202 116901425 MODEL JAAIVD010000023;XM_032903317 XP_032759208 protein-coding 625977291 Zscan20 zinc finger and SCAN domain containing 20 1 29534928 29555685 + 30032202 116896341 MODEL JAAIVD010000025;XM_032897447 XP_032753338 zinc finger and SCAN domain-containing protein 20 protein-coding 625977302 Rasgef1a RasGEF domain family member 1A ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN cell migration (ortholog); positive regulation of Ras protein signal transduction (ortholog) 6 28640010 28721387 - 22301074;30032202 116903353 MODEL JAAIVD010000024;XM_032905828 XP_032761719 ras-GEF domain-containing family member 1A protein-coding 625977319 Kifbp kinesin family binding protein ENCODES a protein that exhibits kinesin binding (ortholog); protein sequestering activity (ortholog); INVOLVED IN in utero embryonic development (ortholog); mitochondrion transport along microtubule (ortholog); transport along microtubule (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 3 (ortholog); complex cortical dysplasia with other brain malformations (ortholog); Goldberg-Shprintzen syndrome (ortholog) 18 28390495 28414544 - 22301074 116887126 MODEL JAAIVD010000013;XM_032888673 XP_032744564 KIF-binding protein protein-coding 625977330 Rad1 RAD1 checkpoint DNA exonuclease INVOLVED IN cellular response to ionizing radiation (ortholog); DNA damage checkpoint signaling (ortholog); meiotic recombination checkpoint signaling (ortholog); FOUND IN checkpoint clamp complex (ortholog); chromosome (ortholog); nucleoplasm (ortholog) 3 170243333 170251512 - 22301074;30032202 116897126 MODEL JAAIVD010000012;XM_032898782;XM_032898783;XM_032898784 XP_032754673;XP_032754674;XP_032754675 cell cycle checkpoint protein RAD1 protein-coding 625977345 LOC116902762 lithostathine-2 6 67921234 67923499 - 30032202 116902762 MODEL JAAIVD010000024;XM_032905110 XP_032761001 protein-coding 625977352 LOC116893905 60S ribosomal protein L36a-like 2 75301937 75302296 + 22301074;30032202 116893905 MODEL JAAIVD010000001;XM_032895629 XP_032751520 protein-coding 625977357 LOC116895677 40S ribosomal protein S13-like 3 198706774 198707227 - 116895677 MODEL JAAIVD010000012 pseudo 625977358 LOC116897871 cystatin-A-like 4 21298343 21303216 - 22301074;30032202 116897871 MODEL JAAIVD010000003;XM_032899279 XP_032755170 protein-coding 625977365 Igsf5 immunoglobulin superfamily member 5 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN bicellular tight junction (ortholog); cell surface (ortholog) 4 48266315 48304200 - 30032202 116898947 MODEL JAAIVD010000003;XM_032900363 XP_032756254 protein-coding 625977378 Ndufs3 NADH:ubiquinone oxidoreductase core subunit S3 ENCODES a protein that exhibits NADH dehydrogenase (ubiquinone) activity (ortholog); NADH dehydrogenase activity (ortholog); INVOLVED IN mitochondrial electron transport, NADH to ubiquinone (ortholog); mitochondrial respiratory chain complex I assembly (ortholog); reactive oxygen species metabolic process (ortholog); PARTICIPATES IN doxorubicin pharmacokinetics pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Neoplasms (ortholog); Cardiomegaly (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) 5 65069124 65076356 - 22301074 116901604 MODEL JAAIVD010000023;XM_032903631 XP_032759522 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial protein-coding 625977389 LOC116904219 60S ribosomal protein L37a-like 1 153383907 153384154 - 116904219 MODEL JAAIVD010000025 pseudo 625977390 LOC116895874 histone deacetylase 1-like 3 105658122 105659468 + 116895874 MODEL JAAIVD010000012 pseudo 625977391 LOC116888537 transcriptional regulator ATRX X 65349556 65488454 - 22301074 116888537 MODEL JAAIVD010000014;XM_032889831;XM_032889832;XM_032889833;XM_032889834;XM_032889835;XM_032889836;XM_032889837;XM_032889838;XM_032889839;XM_032889840;XM_032889841;XM_032889842;XM_032889843 XP_032745722;XP_032745723;XP_032745724;XP_032745725;XP_032745726;XP_032745727;XP_032745728;XP_032745729;XP_032745730;XP_032745731;XP_032745732;XP_032745733;XP_032745734 protein-coding 625977451 LOC116909070 male-enhanced antigen 1-like 9 71847884 71848620 - 116909070 MODEL JAAIVD010000002 pseudo 625977452 LOC116908762 40S ribosomal protein S10-like 9 51342635 51343151 + 116908762 MODEL JAAIVD010000002 pseudo 625977453 LOC116887748 U2 spliceosomal RNA 18 19982292 19982444 + 116887748 MODEL JAAIVD010000013 pseudo 625977454 Adpgk ADP dependent glucokinase ENCODES a protein that exhibits ADP-specific glucokinase activity (ortholog); INVOLVED IN glucose metabolic process (ortholog); FOUND IN endoplasmic reticulum (ortholog) 8 53146457 53172221 + 30032202 116907355 MODEL JAAIVD010000027;XM_032910288;XM_032910289 XP_032766179;XP_032766180 ADP-dependent glucokinase protein-coding 625977468 LOC116900200 ubiquitin-conjugating enzyme E2 S-like 5 51149840 51158678 + 116900200 MODEL JAAIVD010000023 pseudo 625977469 Evpl envoplakin INVOLVED IN keratinocyte differentiation (ortholog); peptide cross-linking (ortholog); regulation of antibacterial peptide production (ortholog); FOUND IN cornified envelope (ortholog); cytosol (ortholog); intermediate filament cytoskeleton (ortholog) 9 67831155 67844984 + 22301074;30032202 116909658 MODEL JAAIVD010000002;XM_032913311 XP_032769202 protein-coding 625977494 Prrx1 paired related homeobox 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN artery morphogenesis (ortholog); cartilage development (ortholog); embryonic cranial skeleton morphogenesis (ortholog); ASSOCIATED WITH agnathia-otocephaly complex (ortholog); atrial fibrillation (ortholog); Craniosynostosis Syndrome, Autosomal Recessive (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 10 42510994 42576674 - 22301074 116911263 MODEL JAAIVD010000005;XM_032915168;XM_032915169 XP_032771059;XP_032771060 paired mesoderm homeobox protein 1 protein-coding 625977506 Slc10a1 solute carrier family 10 member 1 ENCODES a protein that exhibits bile acid transmembrane transporter activity (ortholog); bile acid:sodium symporter activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); cellular response to xenobiotic stimulus (ortholog); response to estrogen (ortholog); ASSOCIATED WITH alcoholic hepatitis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); FOUND IN basolateral plasma membrane (ortholog); membrane (ortholog); plasma membrane (ortholog) 7 95174213 95186115 - 22301074;30032202 116905231 MODEL JAAIVD010000026;XM_032908052 XP_032763943 sodium/bile acid cotransporter protein-coding 625977515 LOC116895538 TD and POZ domain-containing protein 4-like 3 120728320 120729401 + 116895538 MODEL JAAIVD010000012 pseudo 625977516 Gata1 GATA binding protein 1 ENCODES a protein that exhibits C2H2 zinc finger domain binding (ortholog); chromatin binding (ortholog); chromatin DNA binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); basophil differentiation (ortholog); cell development (ortholog); ASSOCIATED WITH acute megakaryocytic leukemia (ortholog); acute myeloid leukemia (ortholog); Altitude Sickness (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-DNA complex (ortholog) X 15363902 15367198 - 22301074;30032202 116889070 MODEL JAAIVD010000014;XM_032890253 XP_032746144 erythroid transcription factor protein-coding 625977523 Nup210l nucleoporin 210 like INVOLVED IN Sertoli cell development (ortholog); spermatid development (ortholog); ASSOCIATED WITH Spermatogenic Failure 97 (ortholog) 3 63431640 63537990 - 30032202 116896619 MODEL JAAIVD010000012;XM_032897883 XP_032753774 nuclear pore membrane glycoprotein 210-like protein-coding 625977565 Ddx43 DEAD-box helicase 43 8 72580525 72609117 + 22301074;30032202 116907660 MODEL JAAIVD010000027;XM_032910752 XP_032766643 probable ATP-dependent RNA helicase DDX43 protein-coding 625977585 Psmg2 proteasome assembly chaperone 2 ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN chaperone-mediated protein complex assembly (ortholog); mitotic spindle assembly checkpoint signaling (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH proteosome-associated autoinflammatory syndrome 4 (ortholog); FOUND IN nucleus (ortholog); protein folding chaperone complex (ortholog) 15 63620728 63636697 - 30032202 116884795 MODEL JAAIVD010000010;XM_032886030 XP_032741921 protein-coding 625977596 LOC116890242 olfactory receptor 11A1-like 1 271314532 271315464 + 22301074 116890242 MODEL JAAIVD010000025;XM_032890970 XP_032746861 protein-coding 625977599 LOC116901677 ribosome biogenesis protein NSA2 homolog 5 80155012 80157620 - 116901677 MODEL JAAIVD010000023 pseudo 625977600 LOC116887647 AT-rich interactive domain-containing protein 5B-like 18 18557947 18645183 + 30032202 116887647 MODEL JAAIVD010000013;XM_032889235 XP_032745126 protein-coding 625977607 Toe1 target of EGR1, exonuclease ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); poly(A)-specific ribonuclease activity (ortholog); snRNA binding (ortholog); INVOLVED IN snRNA 3'-end processing (ortholog); ASSOCIATED WITH genetic disease (ortholog); Hereditary Neoplastic Syndromes (ortholog); pontocerebellar hypoplasia (ortholog); FOUND IN Cajal body (ortholog); cytoplasm (ortholog) 1 40440429 40443987 - 22301074;30032202 116898489 MODEL JAAIVD010000025;XM_032899733 XP_032755624 target of EGR1 protein 1 protein-coding 625977620 LOC116904479 40S ribosomal protein S6-like 6 141732216 141743989 + 116904479 MODEL JAAIVD010000024 pseudo 625977621 Nop14 NOP14 nucleolar protein ENCODES a protein that exhibits enzyme binding (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 11 70397740 70418738 + 22301074;30032202 116911943 MODEL JAAIVD010000006;XM_032915844 XP_032771735 nucleolar protein 14 protein-coding 625977643 Lss lanosterol synthase ENCODES a protein that exhibits lanosterol synthase activity (ortholog); INVOLVED IN cholesterol biosynthetic process (ortholog); cholesterol biosynthetic process via desmosterol (ortholog); cholesterol biosynthetic process via lathosterol (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH alopecia-mental retardation syndrome 4 (ortholog); cataract (ortholog); cataract 44 (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum membrane (ortholog); lipid droplet (ortholog) 8 106591950 106619854 - 22301074;30032202 116907854 MODEL JAAIVD010000027;XM_032911044 XP_032766935 protein-coding 625977669 LOC116895590 heat shock cognate 71 kDa protein-like 3 146178169 146180073 - 116895590 MODEL JAAIVD010000012 pseudo 625977670 Znf609 zinc finger protein 609 ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); promoter-specific chromatin binding (ortholog); INVOLVED IN positive regulation of neuron migration (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of myoblast proliferation (ortholog); ASSOCIATED WITH urinary bladder cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 8 60004341 60137991 - 30032202 116907443 MODEL JAAIVD010000027;XM_032910414;XM_032910415 XP_032766305;XP_032766306 protein-coding 625977687 LOC116910613 60S ribosomal protein L7a-like 9 23419306 23420103 + 116910613 MODEL JAAIVD010000002 pseudo 625977688 LOC116908055 uncharacterized LOC116908055 8 38791085 38794584 + 116908055 MODEL JAAIVD010000027;XR_004388870 ncrna 625977693 LOC116895062 small nucleolar RNA SNORA17 2 41797541 41797663 - 116895062 MODEL JAAIVD010000001 pseudo 625977694 Ptges3 prostaglandin E synthase 3 ENCODES a protein that exhibits DNA polymerase binding (ortholog); enzyme binding (ortholog); Hsp90 protein binding (ortholog); INVOLVED IN cell population proliferation (ortholog); chaperone-mediated protein complex assembly (ortholog); cyclooxygenase pathway (ortholog); PARTICIPATES IN aldosterone signaling pathway; cortisol signaling pathway; estrogen signaling pathway; ASSOCIATED WITH atherosclerosis (ortholog); autism spectrum disorder (ortholog); breast cancer (ortholog); FOUND IN actin filament (ortholog); cytosol (ortholog); neuronal cell body (ortholog) 1 155539577 155557116 + 30032202 116905857 MODEL JAAIVD010000025;XM_032908842 XP_032764733 protein-coding 625977706 Ccdc78 coiled-coil domain containing 78 INVOLVED IN de novo centriole assembly involved in multi-ciliated epithelial cell differentiation (ortholog); skeletal muscle contraction (ortholog); ASSOCIATED WITH centronuclear myopathy (ortholog); centronuclear myopathy 4 (ortholog); congenital structural myopathy (ortholog); FOUND IN centriole (ortholog); cytoplasm (ortholog); deuterosome (ortholog) 9 3050734 3056423 + 30032202 116909146 MODEL JAAIVD010000002;XM_032912631 XP_032768522 coiled-coil domain-containing protein 78 protein-coding 625977722 LOC116890005 olfactory receptor 9 1 183892095 183893033 + 22301074 116890005 MODEL JAAIVD010000025;XM_032890790 XP_032746681 protein-coding 625977725 Yae1 YAE1 maturation factor of ABCE1 INVOLVED IN protein maturation (ortholog) 14 36810406 36816931 - 116883599 MODEL JAAIVD010000009;XM_032884781 XP_032740672 protein YAE1 homolog protein-coding 625977732 Gpr17 G protein-coupled receptor 17 ENCODES a protein that exhibits receptor serine/threonine kinase binding (ortholog); INVOLVED IN negative regulation of inflammatory response to antigenic stimulus (ortholog); oligodendrocyte differentiation (ortholog); ASSOCIATED WITH brain infarction (ortholog); Hypercholesterolemia (ortholog); Insulin Resistance (ortholog) 15 12287971 12290159 + 22301074;30032202 116884272 MODEL JAAIVD010000010;XM_032885356 XP_032741247 uracil nucleotide/cysteinyl leukotriene receptor protein-coding 625977737 Rnf11 ring finger protein 11 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN protein autoubiquitination (ortholog); ubiquitin-dependent protein catabolic process (ortholog); PARTICIPATES IN tumor necrosis factor mediated signaling pathway; FOUND IN ubiquitin ligase complex (ortholog) 1 45384780 45408061 + 116898953 MODEL JAAIVD010000025;XM_032900373 XP_032756264 protein-coding 625977744 LOC116915231 DNA repair protein RAD51 homolog 1-like 14 27211290 27212197 + 116915231 MODEL JAAIVD010000009 pseudo 625977745 Ddx47 DEAD-box helicase 47 INVOLVED IN extrinsic apoptotic signaling pathway via death domain receptors (ortholog); RNA splicing (ortholog); rRNA processing (ortholog); ASSOCIATED WITH intellectual disability (ortholog); FOUND IN nucleolus (ortholog) 6 14425476 14437668 - 22301074 116903164 MODEL JAAIVD010000024;XM_032905531 XP_032761422 probable ATP-dependent RNA helicase DDX47 protein-coding 625977761 Myl1 myosin light chain 1 ENCODES a protein that exhibits structural constituent of muscle (ortholog); INVOLVED IN cardiac muscle contraction (ortholog); muscle contraction (ortholog); ASSOCIATED WITH congenital myopathy 14 (ortholog); Heart Injuries (ortholog); FOUND IN contractile muscle fiber (ortholog); myofibril (ortholog) 4 139919487 139938935 + 22301074;30032202 116898209 MODEL JAAIVD010000003;XM_032899568;XM_032899569;XM_032899570 XP_032755459;XP_032755460;XP_032755461 myosin light chain 1/3, skeletal muscle isoform protein-coding 625977777 Dnmt1 DNA methyltransferase 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA (cytosine-5-)-methyltransferase activity (ortholog); DNA binding (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to bisphenol A (ortholog); cellular response to lead ion (ortholog); PARTICIPATES IN DNA modification pathway; glycine N-methyltransferase deficiency pathway; homocysteine metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); alopecia areata (ortholog); FOUND IN heterochromatin (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 8 17168919 17213593 - 22301074;30032202;9878564 116906812 MODEL AB012214;JAAIVD010000027;XM_032909689 BAA37118;XP_032765580 DNA (cytosine-5)-methyltransferase 1;DNA cytosine 5 methyltransferase protein-coding 625977819 Slc28a1 solute carrier family 28 member 1 ENCODES a protein that exhibits azole transmembrane transporter activity (ortholog); pyrimidine nucleobase transmembrane transporter activity (ortholog); pyrimidine- and adenosine-specific:sodium symporter activity (ortholog); INVOLVED IN azole transmembrane transport (ortholog); cytidine transport (ortholog); nucleoside import across plasma membrane (ortholog); PARTICIPATES IN capecitabine pharmacodynamics pathway; capecitabine pharmacokinetics pathway; gemcitabine pharmacodynamics pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); High Myopia (ortholog); Uridine-Cytidineuria (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); plasma membrane (ortholog) 2 119090960 119128571 - 22301074;30032202 116894268 MODEL JAAIVD010000001;XM_032895978 XP_032751869 sodium/nucleoside cotransporter 1 protein-coding 625977838 Crym crystallin mu ENCODES a protein that exhibits delta1-piperideine-2-carboxylate reductase activity (ortholog); hormone binding (ortholog); NADP binding (ortholog); INVOLVED IN mitochondrial transport (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); response to hormone (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 40 (ortholog); congestive heart failure (ortholog); Deafness (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 2 81494094 81509349 + 30032202 116891584 MODEL JAAIVD010000001;XM_032892764 XP_032748655 ketimine reductase mu-crystallin protein-coding 625977850 Rev3l REV3 like, DNA directed polymerase zeta catalytic subunit ENCODES a protein that exhibits DNA-directed DNA polymerase activity (ortholog); INVOLVED IN DNA biosynthetic process (ortholog); DNA repair (ortholog); error-prone translesion synthesis (ortholog); ASSOCIATED WITH colon carcinoma (ortholog); genetic disease (ortholog); FOUND IN nucleolus (ortholog); site of DNA damage (ortholog); zeta DNA polymerase complex (ortholog) 18 39535642 39691188 + 22301074;30032202 116887026 MODEL JAAIVD010000013;XM_032888520 XP_032744411 DNA polymerase zeta catalytic subunit protein-coding 625977886 LOC116906398 small nucleolar RNA SNORD113/SNORD114 family 7 127270842 127270904 + 116906398 MODEL JAAIVD010000026 pseudo 625977887 LOC116909394 40S ribosomal protein S4, X isoform-like 9 38424105 38424856 + 116909394 MODEL JAAIVD010000002 pseudo 625977888 Scn5a sodium voltage-gated channel alpha subunit 5 ENCODES a protein that exhibits ankyrin binding (ortholog); calmodulin binding (ortholog); enzyme binding (ortholog); INVOLVED IN atrial cardiac muscle cell action potential (ortholog); AV node cell action potential (ortholog); AV node cell to bundle of His cell communication (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); atrial fibrillation (ortholog); atrial standstill 1 (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); endoplasmic reticulum (ortholog) 8 110720187 110818278 - 22301074;30032202 116907917 MODEL JAAIVD010000027;XM_032911120;XM_032911121;XM_032911122;XM_032911123;XM_032911124;XM_032911125;XM_032911126;XM_032911127;XM_032911128 XP_032767011;XP_032767012;XP_032767013;XP_032767014;XP_032767015;XP_032767016;XP_032767017;XP_032767018;XP_032767019 sodium channel protein type 5 subunit alpha protein-coding 625977932 P3h4 prolyl 3-hydroxylase family member 4 (inactive) INVOLVED IN bone remodeling (ortholog); collagen biosynthetic process (ortholog); collagen fibril organization (ortholog); FOUND IN catalytic complex (ortholog); endoplasmic reticulum (ortholog); synaptonemal complex (ortholog) 9 59711486 59717318 - 22301074;30032202 116909996 MODEL JAAIVD010000002;XM_032913781 XP_032769672 endoplasmic reticulum protein SC65 protein-coding 625977944 Ngrn neugrin, neurite outgrowth associated ENCODES a protein that exhibits rRNA binding (ortholog); INVOLVED IN mitochondrial ribosome assembly (ortholog); positive regulation of mitochondrial translation (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) 2 119983067 119989281 - 30032202 116891925 MODEL JAAIVD010000001;XM_032893357;XM_032893358;XR_004386869 XP_032749248;XP_032749249 neugrin protein-coding 625977958 LOC116904732 small nucleolar RNA SNORA17 6 23783886 23784013 - 116904732 MODEL JAAIVD010000024;XR_004388422 snorna 625977961 LOC116883203 sorbitol dehydrogenase-like 14 40898775 40906946 - 116883203 MODEL JAAIVD010000009 pseudo 625977962 LOC116911890 U6 spliceosomal RNA 10 21336814 21336925 + 116911890 MODEL JAAIVD010000005;XR_004389400 snrna 625977965 LOC116904552 killer cell lectin-like receptor 4 6 17679120 17699132 + 116904552 MODEL JAAIVD010000024 pseudo 625977966 Cdk4 cyclin dependent kinase 4 ENCODES a protein that exhibits cyclin binding (ortholog); cyclin-dependent protein serine/threonine kinase activity (ortholog); kinase activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); cellular response to interleukin-4 (ortholog); cellular response to ionomycin (ortholog); PARTICIPATES IN G1/S transition pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); Brain Neoplasms (ortholog); Brain Stem Neoplasms (ortholog); FOUND IN bicellular tight junction (ortholog); chromatin (ortholog); cyclin D1-CDK4 complex (ortholog) 1 205492306 205496087 + 22301074;30032202 116909810 MODEL JAAIVD010000025;XM_032913514;XM_032913522 XP_032769405;XP_032769413 cyclin-dependent kinase 4 protein-coding 625977979 LOC116900575 olfactory receptor 4F3/4F16/4F29 5 90322782 90323726 - 22301074 116900575 MODEL JAAIVD010000023;XM_032902298 XP_032758189 protein-coding 625977983 LOC116889552 U2 spliceosomal RNA X 63394972 63395123 + 116889552 MODEL JAAIVD010000014 pseudo 625977984 LOC116900505 60S ribosomal protein L38-like 5 73301372 73301687 + 116900505 MODEL JAAIVD010000023 pseudo 625977985 Tubg1 tubulin gamma 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN meiotic spindle organization (ortholog); spermatid development (ortholog); ASSOCIATED WITH complex cortical dysplasia with other brain malformations (ortholog); complex cortical dysplasia with other brain malformations 4 (ortholog); COVID-19 (ortholog); FOUND IN apical part of cell (ortholog); cell leading edge (ortholog); centriole (ortholog) 9 60415169 60421807 + 22301074;30032202 116910610 MODEL JAAIVD010000002;XM_032914557 XP_032770448 tubulin gamma-1 chain protein-coding 625978000 LOC116900363 double-strand-break repair protein rad21 homolog 5 69370271 69372041 - 116900363 MODEL JAAIVD010000023 pseudo 625978001 Ccdc167 coiled-coil domain containing 167 18 4147043 4163827 + 116887570 MODEL JAAIVD010000013;XM_032889190 XP_032745081 coiled-coil domain-containing protein 167 protein-coding 625978009 LOC116913204 uncharacterized LOC116913204 12 67798036 67813959 - 116913204 MODEL JAAIVD010000007;XM_032917387 XP_032773278 uncharacterized protein LOC116913204 protein-coding 625978015 Rpl6 ribosomal protein L6 ENCODES a protein that exhibits 5.8S rRNA binding (ortholog); mRNA binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN A band (ortholog); cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog) 16 32615644 32620289 - 22301074 116885520 MODEL JAAIVD010000004;XM_032886815 XP_032742706 60S ribosomal protein L6 protein-coding 625978026 LOC116883738 protein CTLA-2-beta-like 14 77276247 77278159 + 116883738 MODEL JAAIVD010000009;XM_032884969;XR_004385780 XP_032740860 protein-coding 625978037 Mgll monoglyceride lipase ENCODES a protein that exhibits hydrolase activity (ortholog); monoacylglycerol lipase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN acylglycerol catabolic process (ortholog); arachidonate metabolic process (ortholog); long-term synaptic depression (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); cocaine dependence (ortholog); FOUND IN axon (ortholog); cerebellar climbing fiber to Purkinje cell synapse (ortholog); cytosol (ortholog) 6 57502268 57603999 - 30032202 116903521 MODEL JAAIVD010000024;XM_032906129;XM_032906130;XM_032906131;XM_032906132 XP_032762020;XP_032762021;XP_032762022;XP_032762023 protein-coding 625978059 LOC116893716 olfactory receptor 5B12-like 2 13521179 13522126 + 22301074;30032202 116893716 MODEL JAAIVD010000001;XM_032895430 XP_032751321 protein-coding 625978063 Cdc23 cell division cycle 23 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); mitotic cell cycle (ortholog); mitotic metaphase chromosome alignment (ortholog); ASSOCIATED WITH infertility (ortholog); FOUND IN anaphase-promoting complex (ortholog) 15 9702596 9721195 + 22301074;30032202 116884447 MODEL JAAIVD010000010;XM_032885542 XP_032741433 cell division cycle protein 23 homolog protein-coding 625978083 Trappc6a trafficking protein particle complex subunit 6A 2 171109661 171116234 - 22301074;30032202 116892527 MODEL JAAIVD010000001;XM_032894285 XP_032750176 trafficking protein particle complex 6A protein-coding 625978093 LOC116908709 CMRF35-like molecule 2 9 69086970 69094476 + 30032202 116908709 MODEL JAAIVD010000002;XM_032912046 XP_032767937 protein-coding 625978099 Rnf152 ring finger protein 152 ENCODES a protein that exhibits small GTPase binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); negative regulation of TORC1 signaling (ortholog); positive regulation of autophagy (ortholog); FOUND IN lysosomal membrane (ortholog); lysosome (ortholog) 10 90412687 90482462 + 22301074;30032202 116911221 MODEL JAAIVD010000005;XM_032915116;XM_032915117;XM_032915118 XP_032771007;XP_032771008;XP_032771009 E3 ubiquitin-protein ligase RNF152 protein-coding 625978111 LOC116884951 28S ribosomal protein S18b, mitochondrial-like 15 29080584 29082649 - 116884951 MODEL JAAIVD010000010 pseudo 625978112 Slc26a1 solute carrier family 26 member 1 ENCODES a protein that exhibits chloride transmembrane transporter activity (ortholog); oxalate transmembrane transporter activity (ortholog); solute:inorganic anion antiporter activity (ortholog); INVOLVED IN chloride transport (ortholog); oxalate transport (ortholog); sulfate transmembrane transport (ortholog); ASSOCIATED WITH calcium oxalate nephrolithiasis (ortholog); Calcium Oxalate Nephrolithiasis 1 (ortholog); genetic disease (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) 11 18461758 18465817 - 22301074;30032202 116912169 MODEL JAAIVD010000006;XM_032916095 XP_032771986 sulfate anion transporter 1 protein-coding 625978118 LOC116896042 40S ribosomal protein S28-like 3 195643216 195656688 - 22301074;30032202 116896042 MODEL JAAIVD010000012;XM_032897043 XP_032752934 protein-coding 625978122 Cct6b chaperonin containing TCP1 subunit 6B ENCODES a protein that exhibits protein folding chaperone (ortholog); INVOLVED IN protein folding (ortholog); ASSOCIATED WITH Burkitt lymphoma (ortholog); FOUND IN chaperonin-containing T-complex (ortholog) 9 87749912 87795405 + 22301074;30032202 116909204 MODEL JAAIVD010000002;XM_032912700 XP_032768591 T-complex protein 1 subunit zeta-2 protein-coding 625978140 Carns1 carnosine synthase 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); carnosine synthase activity (ortholog); homocarnosine synthase activity (ortholog); INVOLVED IN carnosine biosynthetic process (ortholog); response to peptide (ortholog); PARTICIPATES IN histidine metabolic pathway; histidinemia pathway 2 3468077 3477761 + 22301074;30032202 116890781 MODEL JAAIVD010000001;XM_032891250;XM_032891251 XP_032747141;XP_032747142 protein-coding 625978157 LOC116895589 uncharacterized LOC116895589 3 145284397 145340357 - 22301074;30032202 116895589 MODEL JAAIVD010000012;XM_032896816 XP_032752707 uncharacterized protein LOC116895589 protein-coding 625978188 Tmem119 transmembrane protein 119 INVOLVED IN BMP signaling pathway (ortholog); endochondral ossification (ortholog); negative regulation of bone resorption (ortholog); FOUND IN endoplasmic reticulum (ortholog); plasma membrane (ortholog) 16 40178059 40180097 + 22301074;30032202 116885366 MODEL JAAIVD010000004;XM_032886640 XP_032742531 protein-coding 625978193 LOC116905546 uncharacterized LOC116905546 7 9849258 9852324 - 116905546 MODEL JAAIVD010000026;XR_004388551 ncrna 625978199 Mesd mesoderm development LRP chaperone ENCODES a protein that exhibits identical protein binding (ortholog); low-density lipoprotein particle receptor binding (ortholog); protein folding chaperone (ortholog); INVOLVED IN negative regulation of glycoprotein biosynthetic process (ortholog); ossification (ortholog); phagocytosis (ortholog); ASSOCIATED WITH osteogenesis imperfecta type 20 (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); nuclear body (ortholog) 2 116436377 116449656 - 22301074;30032202 116891882 MODEL JAAIVD010000001;XM_032893293;XM_032893294 XP_032749184;XP_032749185 LRP chaperone MESD protein-coding 625978209 LOC116896113 small proline-rich protein 2D 3 790242 790499 + 22301074 116896113 MODEL JAAIVD010000012;XM_032897077 XP_032752968 protein-coding 625978212 LOC116886730 small nucleolar RNA SNORA48 17 18036772 18036915 + 116886730 MODEL JAAIVD010000011;XR_004386140 snorna 625978215 Hsd17b10 hydroxysteroid 17-beta dehydrogenase 10 ENCODES a protein that exhibits (3S)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity (ortholog); 17-beta-hydroxysteroid dehydrogenase (NAD+) activity (ortholog); 3-hydroxy-2-methylbutyryl-CoA dehydrogenase activity (ortholog); INVOLVED IN androgen metabolic process (ortholog); bile acid biosynthetic process (ortholog); brexanolone metabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyacyl-CoA dehydrogenase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); azoospermia (ortholog); COVID-19 (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrial nucleoid (ortholog); mitochondrial ribonuclease P complex (ortholog) X 12745821 12748369 - 30032202 116889141 MODEL JAAIVD010000014;XM_032890313 XP_032746204 3-hydroxyacyl-CoA dehydrogenase type-2 protein-coding 625978225 Mllt6 MLLT6, PHD finger containing ENCODES a protein that exhibits histone binding (ortholog); nucleosome binding (ortholog); INVOLVED IN chromatin organization (ortholog); negative regulation of urine volume (ortholog); positive regulation of gene expression (ortholog) 9 56698690 56720015 - 30032202 116908640 MODEL JAAIVD010000002;XM_032911898 XP_032767789 protein AF-17 protein-coding 625978249 Bcr BCR activator of RhoGEF and GTPase ENCODES a protein that exhibits enzyme binding (ortholog); GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); activation of GTPase activity (ortholog); brain development (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); B-lymphoblastic leukemia/lymphoma (ortholog); Blast Crisis (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) 18 12267193 12394969 - 22301074;30032202 116886883 MODEL JAAIVD010000013;XM_032888340 XP_032744231 breakpoint cluster region protein protein-coding 625978275 Capn6 calpain 6 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN microtubule bundle formation (ortholog); regulation of cytoskeleton organization (ortholog); ASSOCIATED WITH hypertension (ortholog); prostate cancer (ortholog); FOUND IN microtubule (ortholog); perinuclear region of cytoplasm (ortholog); spindle microtubule (ortholog) X 95821940 95839772 - 22301074;30032202 116889186 MODEL JAAIVD010000014;XM_032890346 XP_032746237 calpain-6 protein-coding 625978291 LOC116898361 transmembrane protein 126A-like 4 57641120 57644173 + 116898361 MODEL JAAIVD010000003 pseudo 625978292 Cdk13 cyclin dependent kinase 13 ENCODES a protein that exhibits cyclin binding (ortholog); protein kinase binding (ortholog); RNA polymerase II CTD heptapeptide repeat kinase activity (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); hemopoiesis (ortholog); negative regulation of stem cell differentiation (ortholog); ASSOCIATED WITH amenorrhea (ortholog); autism spectrum disorder (ortholog); autosomal dominant Wolfram syndrome (ortholog); FOUND IN cyclin K-CDK13 complex (ortholog); nuclear cyclin-dependent protein kinase holoenzyme complex (ortholog); nuclear speck (ortholog) 14 36574353 36663779 + 22301074;30032202 116883386 MODEL JAAIVD010000009;XM_032884506;XM_032884507 XP_032740397;XP_032740398 cyclin-dependent kinase 13 protein-coding 625978312 LOC116891998 40S ribosomal protein S29-like 2 134475200 134475494 + 116891998 MODEL JAAIVD010000001 pseudo 625978313 LOC116893085 nuclear pore complex protein Nup133-like 2 51535592 51538756 - 116893085 MODEL JAAIVD010000001 pseudo 625978314 LOC116890604 small nucleolar RNA SNORA26 1 118863447 118863567 + 116890604 MODEL JAAIVD010000025;XR_004386755 snorna 625978317 Cmip c-Maf inducing protein INVOLVED IN in utero embryonic development (ortholog); ASSOCIATED WITH esophageal atresia (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 17 36906850 37112484 + 30032202 116886459 MODEL JAAIVD010000011;XM_032887960 XP_032743851 C-Maf-inducing protein protein-coding 625978342 Carhsp1 calcium regulated heat stable protein 1 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); INVOLVED IN regulation of mRNA stability (ortholog); ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); FOUND IN cytoplasmic exosome (RNase complex) (ortholog); cytosol (ortholog); P granule (ortholog) 9 13361391 13374940 + 30032202 116910439 MODEL JAAIVD010000002;XM_032914287;XM_032914288 XP_032770178;XP_032770179 calcium-regulated heat-stable protein 1 protein-coding 625978353 LOC116910296 histidine triad nucleotide-binding protein 1-like 9 46497882 46498243 + 116910296 MODEL JAAIVD010000002 pseudo 625978354 Tpo thyroid peroxidase ENCODES a protein that exhibits iodide peroxidase activity (ortholog); INVOLVED IN cellular response to nitric oxide (ortholog); embryonic hemopoiesis (ortholog); response to lipid (ortholog); PARTICIPATES IN thyroid hormone biosynthetic pathway; ASSOCIATED WITH autoimmune disease (ortholog); congenital hypothyroidism (ortholog); Congenital Nongoitrous Hypothyroidism (ortholog); FOUND IN cell surface (ortholog) 7 43494061 43556229 - 22301074;30032202 116905659 MODEL JAAIVD010000026;XM_032908631 XP_032764522 protein-coding 625978375 Fnbp1l formin binding protein 1 like ENCODES a protein that exhibits GTPase binding (ortholog); INVOLVED IN cilium assembly (ortholog); clathrin-dependent endocytosis (ortholog); membrane invagination (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) 3 37202625 37301464 + 22301074 116896297 MODEL JAAIVD010000012;XM_032897380;XM_032897381;XM_032897382;XM_032897384 XP_032753271;XP_032753272;XP_032753273;XP_032753275 formin-binding protein 1-like protein-coding 625978401 Adamts2 ADAM metallopeptidase with thrombospondin type 1 motif 2 ENCODES a protein that exhibits peptidase activity (ortholog); INVOLVED IN collagen fibril organization (ortholog); lung development (ortholog); protein processing (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Ehlers-Danlos syndrome (ortholog); Ehlers-Danlos syndrome dermatosparaxis type (ortholog); FOUND IN extracellular matrix (ortholog) 9 33261095 33461782 + 22301074;30032202 116909670 MODEL JAAIVD010000002;XM_032913325 XP_032769216 A disintegrin and metalloproteinase with thrombospondin motifs 2 protein-coding 625978427 LOC116900506 uncharacterized LOC116900506 5 75174948 75257649 + 116900506 MODEL JAAIVD010000023;XR_004387932 ncrna 625978432 Mlycd malonyl-CoA decarboxylase ENCODES a protein that exhibits identical protein binding (ortholog); malonyl-CoA decarboxylase activity (ortholog); INVOLVED IN acetyl-CoA biosynthetic process (ortholog); fatty acid biosynthetic process (ortholog); fatty acid oxidation (ortholog); PARTICIPATES IN malonic aciduria pathway; methylmalonic aciduria, cobalamin-related pathway; propanoate metabolic pathway; ASSOCIATED WITH Cardiac Fibrosis (ortholog); cardiomyopathy (ortholog); Cardiotoxicity (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 17 39040413 39056454 + 22301074;30032202 116886361 MODEL JAAIVD010000011;XM_032887823 XP_032743714 malonyl-CoA decarboxylase, mitochondrial protein-coding 625978441 LOC116908678 ubiquitin-conjugating enzyme E2 R2-like 1 159335560 159392067 + 30032202 116908678 MODEL JAAIVD010000025;XM_032912024 XP_032767915 protein-coding 625978449 LOC116906485 small nucleolar RNA SNORA79 7 104711932 104712074 - 116906485 MODEL JAAIVD010000026;XR_004388728 snorna 625978452 LOC116898444 exocrine gland-secreted peptide 1-like 4 95833735 95835763 - 22301074 116898444 MODEL JAAIVD010000003;XM_032899712 XP_032755603 protein-coding 625978456 Kcnb1 potassium voltage-gated channel subfamily B member 1 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); outward rectifier potassium channel activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN action potential (ortholog); cellular response to calcium ion (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN insulin secretion pathway; ASSOCIATED WITH developmental and epileptic encephalopathy (ortholog); developmental and epileptic encephalopathy 26 (ortholog); Diaphragmatic Hernia (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); cell surface (ortholog) 5 150791833 150879525 + 22301074;30032202 116902317 MODEL JAAIVD010000023;XM_032904764 XP_032760655 protein-coding 625978463 LOC116895841 40S ribosomal protein S6-like 3 82765985 82766710 - 116895841 MODEL JAAIVD010000012 pseudo 625978464 LOC116887789 U1 spliceosomal RNA 18 46089757 46089905 - 116887789 MODEL JAAIVD010000013 pseudo 625978465 Tshz3 teashirt zinc finger homeobox 3 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); kidney morphogenesis (ortholog); kidney smooth muscle cell differentiation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); CAKUT (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN growth cone (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 161867738 161940106 - 22301074;30032202 116892258 MODEL JAAIVD010000001;XM_032893839 XP_032749730 teashirt homolog 3 protein-coding 625978471 Nup133 nucleoporin 133 ENCODES a protein that exhibits structural constituent of nuclear pore (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); nephron development (ortholog); neural tube development (ortholog); PARTICIPATES IN mRNA nuclear export pathway; ASSOCIATED WITH Galloway-Mowat syndrome (ortholog); Galloway-Mowat Syndrome 8 (ortholog); nephrotic syndrome type 18 (ortholog); FOUND IN kinetochore (ortholog); nuclear envelope (ortholog); nuclear membrane (ortholog) 17 43451589 43501145 - 22301074;30032202 116886394 MODEL JAAIVD010000011;XM_032887862;XR_004386102 XP_032743753 nuclear pore complex protein Nup133 protein-coding 625978504 Crybb1 crystallin beta B1 ENCODES a protein that exhibits structural constituent of eye lens (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 17 multiple types (ortholog) 16 41706326 41720170 - 30032202 116885716 MODEL JAAIVD010000004;XM_032887024;XM_032887025;XM_032887026 XP_032742915;XP_032742916;XP_032742917 beta-crystallin B1 protein-coding 625978519 LOC116898272 PHD finger-like domain-containing protein 5A 4 164505591 164505951 + 116898272 MODEL JAAIVD010000003 pseudo 625978520 LOC116897590 small nucleolar RNA SNORA17 3 119869354 119869481 + 116897590 MODEL JAAIVD010000012;XR_004387593 snorna 625978523 Rrp1b ribosomal RNA processing 1B ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN cellular response to virus (ortholog); negative regulation of GTPase activity (ortholog); positive regulation of apoptotic process (ortholog); FOUND IN chromosome (ortholog); euchromatin (ortholog); granular component (ortholog) 18 1807923 1831455 - 22301074;30032202 116887129 MODEL JAAIVD010000013;XM_032888677 XP_032744568 ribosomal RNA processing protein 1 homolog B protein-coding 625978543 LOC116897508 small nucleolar RNA SNORA44 3 135507000 135507111 - 116897508 MODEL JAAIVD010000012;XR_004387528 snorna 625978546 Rassf5 Ras association domain family member 5 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); positive regulation of protein ubiquitination (ortholog); regulation of protein localization to nucleus (ortholog); ASSOCIATED WITH Kidney Neoplasms (ortholog); lung non-small cell carcinoma (ortholog); neuroblastoma (ortholog); FOUND IN nucleus (ortholog) 10 4567552 4631853 + 22301074;30032202 116911011 MODEL JAAIVD010000005;XM_032914740;XM_032914741 XP_032770631;XP_032770632 ras association domain-containing protein 5 protein-coding 625978559 LOC116900903 alpha-enolase-like 5 77562594 77563187 - 116900903 MODEL JAAIVD010000023 pseudo 625978560 LOC116886741 small nucleolar RNA SNORA17 17 23350432 23350563 - 116886741 MODEL JAAIVD010000011;XR_004386148 snorna 625978563 Hes1 hes family bHLH transcription factor 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN adenohypophysis development (ortholog); aorta morphogenesis (ortholog); artery morphogenesis (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); amyotrophic lateral sclerosis (ortholog); Breast Neoplasms (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nuclear matrix (ortholog) 4 14946704 14949676 + 22301074;30032202 116898744 MODEL JAAIVD010000003;XM_032900059 XP_032755950 transcription factor HES-1 protein-coding 625978571 LOC116894006 olfactory receptor 51J1 2 101663338 101664291 - 22301074 116894006 MODEL JAAIVD010000001;XM_032895721 XP_032751612 protein-coding 625978574 Mtfr1 mitochondrial fission regulator 1 INVOLVED IN aerobic respiration (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); plasma membrane (ortholog) 3 134768993 134803413 - 30032202 116897007 MODEL JAAIVD010000012;XM_032898613 XP_032754504 protein-coding 625978586 Ankrd27 ankyrin repeat domain 27 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); SNARE binding (ortholog); INVOLVED IN early endosome to late endosome transport (ortholog); endocytic recycling (ortholog); endosome to melanosome transport (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH eosinophilic esophagitis (ortholog); FOUND IN early endosome (ortholog); late endosome (ortholog); lysosome (ortholog) 2 163025733 163077616 - 30032202 116892263 MODEL JAAIVD010000001;XM_032893849 XP_032749740 ankyrin repeat domain-containing protein 27 protein-coding 625978619 LOC116905561 GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like 7 70127303 70128830 + 22301074;30032202 116905561 MODEL JAAIVD010000026;XM_032908586 XP_032764477 protein-coding 625978623 LOC116898455 putative KHDC1-like protein 4 98739555 98743160 + 22301074;30032202 116898455 MODEL JAAIVD010000003;XM_032899715 XP_032755606 protein-coding 625978629 Map6d1 MAP6 domain containing 1 ENCODES a protein that exhibits calmodulin binding (ortholog); microtubule binding (ortholog); INVOLVED IN N-terminal peptidyl-L-cysteine N-palmitoylation (ortholog); negative regulation of microtubule depolymerization (ortholog); FOUND IN cis-Golgi network (ortholog); Golgi-associated vesicle (ortholog) 4 5036200 5042041 - 22301074;30032202 116898687 MODEL JAAIVD010000003;XM_032899946 XP_032755837 MAP6 domain-containing protein 1 protein-coding 625978636 LOC116899830 small nucleolar RNA SNORA51 4 134759400 134759514 - 116899830 MODEL JAAIVD010000003 pseudo 625978637 LOC116896730 uncharacterized LOC116896730 3 68083685 68098411 + 116896730 MODEL JAAIVD010000012;XR_004387361 ncrna 625978644 LOC116887608 class I histocompatibility antigen, Non-RT1.A alpha-1 chain-like 18 9485178 9492359 + 116887608 MODEL JAAIVD010000013 pseudo 625978645 LOC116894659 vascular non-inflammatory molecule 3 2 209924964 209937152 + 22301074 116894659 MODEL JAAIVD010000001;XM_032896363 XP_032752254 protein-coding 625978656 Tp53inp1 tumor protein p53 inducible nuclear protein 1 ENCODES a protein that exhibits antioxidant activity (ortholog); INVOLVED IN autophagic cell death (ortholog); cellular response to ethanol (ortholog); cellular response to hydroperoxide (ortholog); ASSOCIATED WITH abdominal obesity-metabolic syndrome 1 (ortholog); FOUND IN autophagosome (ortholog); cytosol (ortholog); nucleus (ortholog) 1 132529888 132548101 - 30032202 116903432 MODEL JAAIVD010000025;XM_032905986;XM_032905994;XM_032906002 XP_032761877;XP_032761885;XP_032761893 tumor protein p53-inducible nuclear protein 1 protein-coding 625978671 LOC116883907 ubiquitin-conjugating enzyme E2 L3-like 14 184690 185107 + 116883907 MODEL JAAIVD010000009 pseudo 625978672 Nip7 nucleolar pre-rRNA processing protein NIP7 FOUND IN nucleolus (ortholog) 17 26783960 26786337 + 22301074;30032202 116886636 MODEL JAAIVD010000011;XM_032888141 XP_032744032 60S ribosome subunit biogenesis protein NIP7 homolog protein-coding 625978681 Elovl7 ELOVL fatty acid elongase 7 ENCODES a protein that exhibits fatty acid elongase activity (ortholog); INVOLVED IN fatty acid elongation, polyunsaturated fatty acid (ortholog); fatty acid elongation, saturated fatty acid (ortholog); very long-chain fatty acid biosynthetic process (ortholog); FOUND IN endoplasmic reticulum (ortholog) 3 188679030 188747570 - 22301074;30032202 116897207 MODEL JAAIVD010000012;XM_032898914;XM_032898915 XP_032754805;XP_032754806 elongation of very long chain fatty acids protein 7 protein-coding 625978696 Syt4 synaptotagmin 4 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); clathrin binding (ortholog); INVOLVED IN dense core granule cytoskeletal transport (ortholog); insulin secretion involved in cellular response to glucose stimulus (ortholog); memory (ortholog); ASSOCIATED WITH Experimental Seizures (ortholog); melanoma (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN astrocyte projection (ortholog); axon (ortholog); dendrite (ortholog) 15 42358362 42367739 - 22301074;30032202 116884478 MODEL JAAIVD010000010;XM_032885594 XP_032741485 synaptotagmin-4 protein-coding 625978704 LOC116910898 60S ribosomal protein L7a-like 10 43945092 43945929 - 116910898 MODEL JAAIVD010000005 pseudo 625978705 LOC116901008 zinc finger and SCAN domain-containing protein 5B-like 5 112793683 112864599 - 116901008 MODEL JAAIVD010000023 pseudo 625978706 Ccna2 cyclin A2 ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase regulator activity (ortholog); protein domain specific binding (ortholog); protein kinase binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); cell cycle G1/S phase transition (ortholog); cellular response to cocaine (ortholog); PARTICIPATES IN G1/S transition pathway; p53 signaling pathway; ASSOCIATED WITH Carotid Artery Injuries (ortholog); congestive heart failure (ortholog); COVID-19 (ortholog); FOUND IN cyclin A2-CDK1 complex (ortholog); cyclin A2-CDK2 complex (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog) 3 117415041 117421426 + 22301074;30032202 116896928 MODEL JAAIVD010000012;XM_032898497;XM_032898498 XP_032754388;XP_032754389 cyclin-A2 protein-coding 625978722 Trnat-ugu transfer RNA threonine (anticodon UGU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889702 MODEL JAAIVD010000052 trna 625978723 Nup85 nucleoporin 85 INVOLVED IN chemotaxis (ortholog); lamellipodium assembly (ortholog); macrophage chemotaxis (ortholog); PARTICIPATES IN mRNA nuclear export pathway; ASSOCIATED WITH nephrotic syndrome type 17 (ortholog); FOUND IN cytosol (ortholog); kinetochore (ortholog); nuclear envelope (ortholog) 9 68515293 68534328 - 30032202 116909685 MODEL JAAIVD010000002;XM_032913345 XP_032769236 nuclear pore complex protein Nup85 protein-coding 625978746 Lgals12 galectin 12 ENCODES a protein that exhibits lactose binding (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway (ortholog); FOUND IN mitochondrion (ortholog); nucleus (ortholog) 2 147564 157431 + 30032202 116894788 MODEL JAAIVD010000001;XM_032896438 XP_032752329 galectin-12 protein-coding 625978759 Spata9 spermatogenesis associated 9 3 221194107 221224857 - 116897361 MODEL JAAIVD010000012;XM_032899120 XP_032755011 spermatogenesis-associated protein 9 protein-coding 625978767 Trnam-cau transfer RNA methionine (anticodon CAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41353532 41353604 + 116884215 MODEL JAAIVD010000009 trna 625978768 Kcna3 potassium voltage-gated channel subfamily A member 3 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); outward rectifier potassium channel activity (ortholog); voltage-gated potassium channel activity (ortholog); INVOLVED IN corpus callosum development (ortholog); optic nerve development (ortholog); potassium ion transmembrane transport (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy (ortholog); genetic disease (ortholog); hypertension (ortholog); FOUND IN axon (ortholog); calyx of Held (ortholog); glutamatergic synapse (ortholog) 3 51219111 51222235 - 22301074;2555158;30032202 116896395 MODEL JAAIVD010000012;X16001;XM_032897532 CAA34132;XP_032753423 protein-coding 625978773 Alkbh6 alkB homolog 6, nucleotide demethylase ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 2 165692976 165698221 - 116892324 MODEL JAAIVD010000001;XM_032893950 XP_032749841 alkB homolog 6;alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 APPROVED protein-coding 625978784 Pbxip1 PBX homeobox interacting protein 1 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); transcription coactivator activity (ortholog); transcription corepressor activity (ortholog); INVOLVED IN articular cartilage development (ortholog); cell adhesion (ortholog); cell migration (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease type 2 (ortholog); COVID-19 (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 3 64216360 64229219 - 116896638 MODEL JAAIVD010000012;XM_032897955 XP_032753846 pre-B-cell leukemia transcription factor-interacting protein 1 protein-coding 625978799 LOC116898188 aldehyde oxidase 4 4 134121829 134186493 - 22301074;30032202 116898188 MODEL JAAIVD010000003;XM_032899552 XP_032755443 protein-coding 625978836 LOC116893983 tripartite motif-containing protein 30A-like 2 101357760 101378567 + 22301074 116893983 MODEL JAAIVD010000001;XM_032895699 XP_032751590 protein-coding 625978846 Skic8 SKI8 subunit of superkiller complex INVOLVED IN negative regulation of myeloid cell differentiation (ortholog); nuclear-transcribed mRNA catabolic process (ortholog); nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription elongation pathway; FOUND IN Cdc73/Paf1 complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 48784879 48803731 - 22301074;30032202 116906810 MODEL JAAIVD010000027;XM_032909684;XM_032909685;XM_032909686;XM_032909688 XP_032765575;XP_032765576;XP_032765577;XP_032765579 Wdr61 WD repeat domain 61;WD repeat-containing protein 61 protein-coding 625978871 Zmym4 zinc finger MYM-type containing 4 1 31331699 31448611 + 22301074 116896545 MODEL JAAIVD010000025;XM_032897737 XP_032753628 zinc finger MYM-type protein 4 protein-coding 625978905 LOC116909663 ATP-binding cassette sub-family A member 8-B-like 9 79296392 79346102 + 22301074;30032202 116909663 MODEL JAAIVD010000002;XM_032913316 XP_032769207 protein-coding 625978946 LOC116889241 uncharacterized LOC116889241 X 8141164 8145114 + 116889241 MODEL JAAIVD010000014;XR_004386369 ncrna 625978950 LOC116906344 U7 small nuclear RNA 7 58874116 58874174 + 116906344 MODEL JAAIVD010000026;XR_004388624 snrna 625978953 Retreg1 reticulophagy regulator 1 ENCODES a protein that exhibits endoplasmic reticulum-autophagosome adaptor activity (ortholog); INVOLVED IN autophagy (ortholog); collagen catabolic process (ortholog); endoplasmic reticulum organization (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); genetic disease (ortholog); hereditary sensory and autonomic neuropathy (ortholog); FOUND IN cis-Golgi network (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 3 154834423 154867862 - 30032202 116897066 MODEL JAAIVD010000012;XM_032898691 XP_032754582 protein-coding 625978964 Kifap3 kinesin associated protein 3 ENCODES a protein that exhibits intraciliary transport particle B binding (ortholog); kinesin binding (ortholog); protein phosphatase binding (ortholog); INVOLVED IN anterograde dendritic transport of neurotransmitter receptor complex (ortholog); intracellular protein localization (ortholog); microtubule-based process (ortholog); FOUND IN axoneme (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 10 43011944 43134689 + 30032202 116911472 MODEL JAAIVD010000005;XM_032915455;XM_032915456 XP_032771346;XP_032771347 kinesin-associated protein 3 protein-coding 625978991 LOC116893405 barH-like 1 homeobox protein 2 173284227 173291263 - 22301074;30032202 116893405 MODEL JAAIVD010000001;XM_032895190 XP_032751081 protein-coding 625978996 Myom1 myomesin 1 ENCODES a protein that exhibits identical protein binding (ortholog); kinase binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN extraocular skeletal muscle development (ortholog); positive regulation of cAMP/PKA signal transduction (ortholog); positive regulation of gene expression (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); cardiac arrest (ortholog); cardiomyopathy (ortholog); FOUND IN M band (ortholog); sarcomere (ortholog) 4 180488447 180601631 + 22301074 116899714 MODEL JAAIVD010000003;XM_032901751;XM_032901752;XM_032901753;XM_032901754 XP_032757642;XP_032757643;XP_032757644;XP_032757645 myomesin-1 protein-coding 625979041 LOC116902818 putative vomeronasal receptor-like protein 4 6 84058455 84059367 - 116902818 MODEL JAAIVD010000024 pseudo 625979042 Srf serum response factor ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament organization (ortholog); associative learning (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH Cardiomegaly (ortholog); cardiomyopathy (ortholog); Cardiovascular Abnormalities (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 4 83307697 83316986 + 22301074;30032202 116899106 MODEL JAAIVD010000003;XM_032900623;XM_032900624 XP_032756514;XP_032756515 protein-coding 625979056 LOC116892748 zinc finger protein 54-like 2 180886813 180902635 + 30032202 116892748 MODEL JAAIVD010000001;XM_032894626 XP_032750517 protein-coding 625979064 Pycr1 pyrroline-5-carboxylate reductase 1 ENCODES a protein that exhibits identical protein binding (ortholog); pyrroline-5-carboxylate reductase activity (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); L-proline biosynthetic process (ortholog); negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH Autosomal Recessive Cutis Laxa (ortholog); autosomal recessive cutis laxa type IIB (ortholog); autosomal recessive cutis laxa type IIIB (ortholog); FOUND IN mitochondrion (ortholog); pyrroline-5-carboxylate reductase complex (ortholog) 9 63378835 63383475 + 22301074;30032202 116910110 MODEL JAAIVD010000002;XM_032913941 XP_032769832 pyrroline-5-carboxylate reductase 1, mitochondrial protein-coding 625979077 Zfr2 zinc finger RNA binding protein 2 ASSOCIATED WITH obesity (ortholog) 1 153639079 153657932 - 22301074;30032202 116904511 MODEL JAAIVD010000025;XM_032907303 XP_032763194 zinc finger RNA-binding protein 2 protein-coding 625979099 LOC116899917 small nucleolar RNA SNORD2 4 7899325 7899393 + 116899917 MODEL JAAIVD010000003;XR_004387889 snorna 625979102 LOC116897481 small nucleolar RNA SNORD22 3 90944026 90944154 + 116897481 MODEL JAAIVD010000012;XR_004387505 snorna 625979105 LOC116887890 melanoma-associated antigen B5-like X 51008404 51009411 + 30032202 116887890 MODEL JAAIVD010000014;XM_032889369 XP_032745260 protein-coding 625979108 LOC116897750 sperm-associated antigen 6 4 1956563 2018706 + 30032202 116897750 MODEL JAAIVD010000003;XM_032899184 XP_032755075 protein-coding 625979121 LOC116908348 small nucleolar RNA SNORD18 8 58482046 58482116 + 116908348 MODEL JAAIVD010000027;XR_004388899 snorna 625979124 LOC116889466 small nucleolar RNA SNORA70 X 128828086 128828210 - 116889466 MODEL JAAIVD010000014 pseudo 625979125 LOC116894423 keratin-associated protein 20-2-like 2 158836773 158836931 - 116894423 MODEL JAAIVD010000001;XM_032896127 XP_032752018 protein-coding 625979128 Faxdc2 fatty acid hydroxylase domain containing 2 INVOLVED IN positive regulation of megakaryocyte differentiation (ortholog); positive regulation of protein phosphorylation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); systemic juvenile rheumatoid arthritis (ortholog); FOUND IN cytoplasm (ortholog) 9 40144527 40169418 + 22301074;30032202 116910043 MODEL JAAIVD010000002;XM_032913830 XP_032769721 fatty acid hydroxylase domain-containing protein 2 protein-coding 625979140 LOC116887722 small nucleolar RNA SNORA17 18 39905570 39905692 + 116887722 MODEL JAAIVD010000013 pseudo 625979141 Nol3 nucleolar protein 3 ENCODES a protein that exhibits calcium ion binding (ortholog); caspase binding (ortholog); cysteine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN blood vessel remodeling (ortholog); cardiac muscle cell apoptotic process (ortholog); cellular response to hydrogen peroxide (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Familial Myoclonus (ortholog); Familial Myoclonus 1 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 17 25003375 25007662 + 30032202 116886366 MODEL JAAIVD010000011;XM_032887827 XP_032743718 protein-coding 625979148 LOC116911841 small nucleolar RNA SNORA17 10 41457875 41457946 + 116911841 MODEL JAAIVD010000005 pseudo 625979149 Pms2 PMS1 homolog 2, mismatch repair system component ENCODES a protein that exhibits DNA binding (ortholog); MutSalpha complex binding (ortholog); single base insertion or deletion binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); meiotic mismatch repair (ortholog); PARTICIPATES IN altered mismatch repair pathway; colorectal cancer pathway; mismatch repair pathway; ASSOCIATED WITH Brain Neoplasms (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN MutLalpha complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 16 9244955 9268632 - 22301074;30032202 116885869 MODEL JAAIVD010000004;XM_032887195 XP_032743086 mismatch repair endonuclease PMS2 protein-coding 625979169 Psmb3 proteasome 20S subunit beta 3 ENCODES a protein that exhibits structural constituent of proteasome (ortholog); INVOLVED IN proteasomal protein catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); regulation of proteasomal protein catabolic process (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); proteasome complex (ortholog) 9 56673145 56680402 - 22301074 116908807 MODEL JAAIVD010000002;XM_032912212 XP_032768103 proteasome subunit beta type-3 protein-coding 625979179 LOC116884676 RNA-binding protein 27 15 69416741 69420387 - 22301074;30032202 116884676 MODEL JAAIVD010000010;XM_032885849;XM_032885850;XM_032885851 XP_032741740;XP_032741741;XP_032741742 protein-coding 625979191 Hspa8 heat shock protein family A (Hsp70) member 8 ENCODES a protein that exhibits A1 adenosine receptor binding (ortholog); ATP binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN ATP metabolic process (ortholog); axo-dendritic transport (ortholog); cellular response to cadmium ion (ortholog); PARTICIPATES IN androgen signaling pathway; chaperone mediated autophagy pathway; clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); acute kidney failure (ortholog); Acute Liver Failure (ortholog); FOUND IN asymmetric synapse (ortholog); autophagosome (ortholog); axon (ortholog) 8 35401907 35405851 + 22301074;30032202 116908051 MODEL JAAIVD010000027;XM_032911324 XP_032767215 heat shock cognate 71 kDa protein protein-coding 625979204 LOC116905808 phosphomannomutase 1-like 7 9967997 9968731 - 116905808 MODEL JAAIVD010000026 pseudo 625979205 G6pc3 glucose-6-phosphatase catalytic subunit 3 ENCODES a protein that exhibits glucose-6-phosphatase activity (ortholog); INVOLVED IN gluconeogenesis (ortholog); glucose 6-phosphate metabolic process (ortholog); glucose-6-phosphate transport (ortholog); PARTICIPATES IN gluconeogenesis pathway; ASSOCIATED WITH COVID-19 (ortholog); Dursun Syndrome (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog) 9 61486619 61490926 + 30032202 116909809 MODEL JAAIVD010000002;XM_032913508;XM_032913509 XP_032769399;XP_032769400 glucose-6-phosphatase 3 protein-coding 625979218 LOC116899811 small nucleolar RNA SNORA70 4 40168257 40168394 - 116899811 MODEL JAAIVD010000003;XR_004387812 snorna 625979221 LOC116906771 baculoviral IAP repeat-containing protein 2 8 4018971 4035636 - 22301074;30032202 116906771 MODEL JAAIVD010000027;XM_032909614 XP_032765505 protein-coding 625979232 Lbhd2 LBH domain containing 2 7 128981187 128986083 + 116905916 MODEL JAAIVD010000026;XM_032908903 XP_032764794 LBH domain-containing protein 2 protein-coding 625979240 LOC116908152 uncharacterized LOC116908152 8 35006380 35131238 - 116908152 MODEL JAAIVD010000027;XM_032911455 XP_032767346 uncharacterized protein LOC116908152 protein-coding 625979247 Rapgef2 Rap guanine nucleotide exchange factor 2 ENCODES a protein that exhibits beta-1 adrenergic receptor binding (ortholog); cAMP binding (ortholog); cGMP binding (ortholog); INVOLVED IN adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); blood vessel development (ortholog); PARTICIPATES IN adenosine signaling pathway; ASSOCIATED WITH familial adult myoclonic epilepsy 7 (ortholog); Myoclonic Epilepsies (ortholog); FOUND IN apical plasma membrane (ortholog); bicellular tight junction (ortholog); cell-cell junction (ortholog) 3 74112626 74327233 + 22301074;30032202 116896767 MODEL JAAIVD010000012;XM_032898221;XM_032898222;XM_032898223;XM_032898225;XM_032898226 XP_032754112;XP_032754113;XP_032754114;XP_032754116;XP_032754117 protein-coding 625979293 Mpnd MPN domain containing ASSOCIATED WITH COVID-19 (ortholog) 4 87399896 87406791 + 22301074;30032202 116899164 MODEL JAAIVD010000003;XM_032900727;XM_032900728;XM_032900729;XR_004387692 XP_032756618;XP_032756619;XP_032756620 MPN domain-containing protein protein-coding 625979325 Uchl5 ubiquitin C-terminal hydrolase L5 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); endopeptidase inhibitor activity (ortholog); proteasome binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); forebrain morphogenesis (ortholog); lateral ventricle development (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH alcohol-associated liver disease (ortholog); Experimental Diabetes Mellitus (ortholog); Testis Reperfusion Injury (ortholog); FOUND IN cytosol (ortholog); cytosolic proteasome complex (ortholog); Ino80 complex (ortholog) 10 23696673 23738834 + 22301074;30032202 116911116 MODEL JAAIVD010000005;XM_032914960;XM_032914961;XM_032914962;XM_032914963;XR_004389314 XP_032770851;XP_032770852;XP_032770853;XP_032770854 ubiquitin carboxyl-terminal hydrolase isozyme L5 protein-coding 625979351 Cfap44 cilia and flagella associated protein 44 ENCODES a protein that exhibits peptidase activity (ortholog); INVOLVED IN cell morphogenesis (ortholog); cilium organization (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH spermatogenic failure 20 (ortholog) 4 29280868 29361123 + 22301074 116898865 MODEL JAAIVD010000003;XM_032900232 XP_032756123 cilia- and flagella-associated protein 44 protein-coding 625979390 Cptp ceramide-1-phosphate transfer protein ENCODES a protein that exhibits ceramide 1-phosphate binding (ortholog); ceramide 1-phosphate transfer activity (ortholog); phospholipid binding (ortholog); INVOLVED IN ceramide 1-phosphate transport (ortholog); glycolipid transport (ortholog); negative regulation of autophagy (ortholog); FOUND IN cytosol (ortholog); trans-Golgi network membrane (ortholog) 1 4760161 4764350 + 22301074;30032202 116891691 MODEL JAAIVD010000025;XM_032892961 XP_032748852 protein-coding 625979397 LOC116895229 nucleoside diphosphate kinase B-like 3 20009837 20010243 + 116895229 MODEL JAAIVD010000012 pseudo 625979398 Ogt O-linked N-acetylglucosamine (GlcNAc) transferase ENCODES a protein that exhibits chromatin DNA binding (ortholog); identical protein binding (ortholog); peptide binding (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to glucose stimulus (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN DNA modification pathway; hexosamine biosynthetic pathway; ASSOCIATED WITH aortic valve stenosis (ortholog); Breast Neoplasms (ortholog); Cardiomegaly (ortholog); FOUND IN cerebellar granule cell to Purkinje cell synapse (ortholog); cytosol (ortholog); euchromatin (ortholog) X 58824800 58867294 - 22301074;30032202 116887805 MODEL JAAIVD010000014;XM_032889331 XP_032745222 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit protein-coding 625979424 Wdr25 WD repeat domain 25 ASSOCIATED WITH long QT syndrome (ortholog) 7 126579429 126709516 + 22301074 116905459 MODEL JAAIVD010000026;XM_032908416;XM_032908417 XP_032764307;XP_032764308 WD repeat-containing protein 25 protein-coding 625979435 Xpo4 exportin 4 ENCODES a protein that exhibits nuclear export signal receptor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN positive regulation of protein export from nucleus (ortholog); protein export from nucleus (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 12 67172857 67253609 + 22301074;30032202 116913129 MODEL JAAIVD010000007;XM_032917292;XM_032917293 XP_032773183;XP_032773184 exportin-4 protein-coding 625979465 Spmip3 sperm microtubule inner protein 3 10 56336485 56361392 + 116910990 MODEL JAAIVD010000005;XM_032914701;XM_032914702;XM_032914703 XP_032770592;XP_032770593;XP_032770594 C10H1orf100 chromosome 10 C1orf100 homolog;sperm associated microtubule inner protein 3;uncharacterized protein C1orf100 homolog protein-coding 625979482 Cep15 centrosomal protein 15 12 82354225 82374131 + 116913369 MODEL JAAIVD010000007;XM_032917533;XM_032917534;XM_032917535;XM_032917537;XM_032917538;XM_032917539 XP_032773424;XP_032773425;XP_032773426;XP_032773428;XP_032773429;XP_032773430 C12H3orf14 chromosome 12 C3orf14 homolog;uncharacterized protein C3orf14 homolog protein-coding 625979504 Trpc5 transient receptor potential cation channel subfamily C member 5 ENCODES a protein that exhibits actin binding (ortholog); actinin binding (ortholog); ATPase binding (ortholog); INVOLVED IN negative regulation of dendrite morphogenesis (ortholog); neuron apoptotic process (ortholog); neuron differentiation (ortholog); ASSOCIATED WITH Albuminuria (ortholog); dilated cardiomyopathy 1H (ortholog); hypertension (ortholog); FOUND IN calcium channel complex (ortholog); dendrite (ortholog); growth cone (ortholog) X 96426252 96548815 + 22301074;30032202 116889334 MODEL JAAIVD010000014;XM_032890452 XP_032746343 short transient receptor potential channel 5 protein-coding 625979517 LOC116913930 tubulin alpha-1B chain-like 12 36611475 36612737 + 116913930 MODEL JAAIVD010000007 pseudo 625979518 LOC116905725 transmembrane protein 126A-like 7 185162 185554 + 116905725 MODEL JAAIVD010000026 pseudo 625979519 Nckipsd NCK interacting protein with SH3 domain INVOLVED IN positive regulation of neuron projection development (ortholog); regulation of postsynapse assembly (ortholog); FOUND IN COP9 signalosome (ortholog); glutamatergic synapse (ortholog); nucleoplasm (ortholog) 8 100139917 100149063 + 22301074;30032202 116907620 MODEL JAAIVD010000027;XM_032910675 XP_032766566 NCK-interacting protein with SH3 domain protein-coding 625979536 Dhx33 DEAH-box helicase 33 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); double-stranded RNA binding (ortholog); mRNA binding (ortholog); INVOLVED IN obsolete positive regulation of NF-kappaB transcription factor activity (ortholog); positive regulation of MAPK cascade (ortholog); positive regulation of NLRP3 inflammasome complex assembly (ortholog); FOUND IN cytoplasm (ortholog); NLRP3 inflammasome complex (ortholog); nucleolus (ortholog) 9 50608214 50627298 - 22301074;30032202 116909242 MODEL JAAIVD010000002;XM_032912746 XP_032768637 ATP-dependent RNA helicase DHX33 protein-coding 625979552 LOC116909116 C-C motif chemokine 4 9 87030600 87049199 - 22301074;30032202 116909116 MODEL JAAIVD010000002;XM_032912592 XP_032768483 protein-coding 625979560 Srsf1 serine and arginine rich splicing factor 1 ENCODES a protein that exhibits DNA topoisomerase binding (ortholog); mRNA binding (ortholog); protein kinase B binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); cardiac muscle contraction (ortholog); cellular response to interleukin-17 (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Cardiomegaly (ortholog); cervix uteri carcinoma in situ (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 82760214 82764254 - 30032202 116910588 MODEL JAAIVD010000002;XM_032914510;XM_032914511;XR_004389160 XP_032770401;XP_032770402 serine/arginine-rich splicing factor 1 protein-coding 625979574 Xpot exportin for tRNA ENCODES a protein that exhibits tRNA binding (ortholog); INVOLVED IN tRNA export from nucleus (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear pore (ortholog) 1 200023837 200063798 - 22301074;30032202 116909534 MODEL JAAIVD010000025;XM_032913152 XP_032769043 exportin-T protein-coding 625979603 Zic2 Zic family zinc finger 2 ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN axial mesoderm development (ortholog); cell differentiation (ortholog); central nervous system development (ortholog); ASSOCIATED WITH cognitive disorder (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleus (ortholog) 12 2412573 2417436 - 30032202 116913514 MODEL JAAIVD010000007;XM_032917719 XP_032773610 Zic family member 2;zinc finger protein ZIC 2 protein-coding 625979610 LOC116913836 peptidyl-prolyl cis-trans isomerase FKBP3-like 12 2750474 2751176 + 116913836 MODEL JAAIVD010000007 pseudo 625979611 Hacl1 2-hydroxyacyl-CoA lyase 1 ENCODES a protein that exhibits 2-hydroxyacyl-CoA lyase activity (ortholog); ATP binding (ortholog); carbon-carbon lyase activity (ortholog); INVOLVED IN fatty acid alpha-oxidation (ortholog); fatty acid metabolic process (ortholog); lipid metabolic process (ortholog); PARTICIPATES IN phytanic acid degradation pathway; Refsum disease pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); congenital myasthenic syndrome 5 (ortholog); FOUND IN peroxisome (ortholog) 13 7330052 7368192 - 22301074;30032202 116914690 MODEL JAAIVD010000008;XM_032919110 XP_032775001 protein-coding 625979632 LOC116894476 phosphoglycerate kinase 1-like 2 168857704 168858992 + 116894476 MODEL JAAIVD010000001 pseudo 625979633 LOC116914591 defensin 5 13 64733198 64734274 - 22301074;30032202 116914591 MODEL JAAIVD010000008;XM_032918952 XP_032774843 protein-coding 625979639 LOC116911301 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4-like 10 85401750 85401862 - 116911301 MODEL JAAIVD010000005 pseudo 625979640 Pde1c phosphodiesterase 1C ENCODES a protein that exhibits 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); 3',5'-cyclic-GMP phosphodiesterase activity (ortholog); calmodulin-activated 3',5'-cyclic-GMP phosphodiesterase activity (ortholog); INVOLVED IN negative regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); negative regulation of renin secretion into blood stream (ortholog); response to calcium ion (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH autosomal dominant nonsyndromic deafness (ortholog); autosomal dominant nonsyndromic deafness 74 (ortholog); prostate cancer (ortholog); FOUND IN cilium (ortholog); lysosome (ortholog); neuronal cell body (ortholog) 6 84886516 84978783 + 22301074 116903748 MODEL JAAIVD010000024;XM_032906437 XP_032762328 calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C protein-coding 625979660 LOC116888943 zinc finger protein 182-like X 2933223 2967619 + 30032202 116888943 MODEL JAAIVD010000014;XM_032890178 XP_032746069 protein-coding 625979667 LOC116883402 uncharacterized LOC116883402 14 28376197 28484365 + 116883402 MODEL JAAIVD010000009;XR_004385760 ncrna 625979672 Pdilt protein disulfide isomerase like, testis expressed ENCODES a protein that exhibits protein disulfide isomerase activity (ortholog); protein folding chaperone (ortholog); INVOLVED IN cell migration (ortholog); spermatid development (ortholog) 2 82149787 82181010 + 30032202 116893924 MODEL JAAIVD010000001;XM_032895644 XP_032751535 protein disulfide-isomerase-like protein of the testis protein-coding 625979688 Ccdc92 coiled-coil domain containing 92 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN adipose tissue development (ortholog); connective tissue replacement involved in inflammatory response wound healing (ortholog); energy homeostasis (ortholog); ASSOCIATED WITH Coronary Disease (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog) 16 29068560 29094986 + 30032202 116885450 MODEL JAAIVD010000004;XM_032886734;XR_004386009 XP_032742625 coiled-coil domain-containing protein 92 protein-coding 625979699 LOC116906746 cytochrome P450 4F4-like 1 157091391 157105474 + 22301074 116906746 MODEL JAAIVD010000025;XM_032909577 XP_032765468 protein-coding 625979714 LOC116895326 60S ribosomal protein L7-like 3 33916109 33916856 - 22301074;30032202 116895326 MODEL JAAIVD010000012;XM_032896634 XP_032752525 protein-coding 625979717 LOC116887102 keratin-associated protein 10-8-like 18 1112534 1113391 - 22301074;30032202 116887102 MODEL JAAIVD010000013;XM_032888634;XM_032888635 XP_032744525;XP_032744526 protein-coding 625979724 LOC116902540 small nucleolar RNA SNORA43 5 10448474 10448604 + 116902540 MODEL JAAIVD010000023;XR_004388143 snorna 625979727 Asdurf ASNSD1 upstream open reading frame 4 121859490 121868934 + 116899360 MODEL JAAIVD010000003;XM_032901069 XP_032756960 ASNSD1 upstream open reading frame protein;ASNSD1 upstream reading frame protein-coding 625979735 Gucy2f guanylate cyclase 2F, retinal ENCODES a protein that exhibits guanylate cyclase activity (ortholog); identical protein binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN cGMP metabolic process (ortholog); detection of light stimulus involved in visual perception (ortholog); PARTICIPATES IN visual phototransduction pathway; ASSOCIATED WITH retinal degeneration (ortholog); FOUND IN photoreceptor outer segment membrane (ortholog); plasma membrane (ortholog); rod photoreceptor disc membrane (ortholog) X 94237490 94330466 - 22301074;30032202 116888857 MODEL JAAIVD010000014;XM_032890124 XP_032746015 retinal guanylyl cyclase 2 protein-coding 625979759 Atosa atos homolog A 8 69242289 69312213 + 116908319 MODEL JAAIVD010000027;XM_032911606;XM_032911607;XM_032911608;XM_032911609;XM_032911610;XM_032911611 XP_032767497;XP_032767498;XP_032767499;XP_032767500;XP_032767501;XP_032767502 Fam214a family with sequence similarity 214 member A;protein FAM214A protein-coding 625979792 Sec22b SEC22 homolog B, vesicle trafficking protein INVOLVED IN negative regulation of autophagosome assembly (ortholog); positive regulation of protein catabolic process (ortholog); vesicle-mediated transport (ortholog); FOUND IN COPI-coated vesicle (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) 3 59388779 59410930 - 30032202 116896484 MODEL JAAIVD010000012;XM_032897649 XP_032753540 vesicle-trafficking protein SEC22b protein-coding 625979801 Pip5k1b phosphatidylinositol-4-phosphate 5-kinase type 1 beta ENCODES a protein that exhibits 1-phosphatidylinositol-4-phosphate 5-kinase activity (ortholog); INVOLVED IN phosphatidylinositol biosynthetic process (ortholog); phosphatidylinositol metabolic process (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; FOUND IN cytosol (ortholog); uropod (ortholog) 2 24415792 24690087 - 22301074 116891049 MODEL JAAIVD010000001;XM_032891738 XP_032747629 phosphatidylinositol 4-phosphate 5-kinase type-1 beta protein-coding 625979820 LOC116897961 leucine-rich repeat-containing protein 57-like 4 46566609 46567348 - 116897961 MODEL JAAIVD010000003 pseudo 625979821 LOC116906794 olfactory receptor 8B3-like 8 32221701 32222642 + 22301074;30032202 116906794 MODEL JAAIVD010000027;XM_032909660 XP_032765551 protein-coding 625979825 LOC116888238 uncharacterized protein C15orf39 homolog X 41433994 41437056 + 116888238 MODEL JAAIVD010000014 pseudo 625979826 Tapbpl TAP binding protein like ENCODES a protein that exhibits MHC class I protein complex binding (ortholog); INVOLVED IN negative regulation of antigen processing and presentation of peptide antigen via MHC class I (ortholog); peptide antigen assembly with MHC class I protein complex (ortholog); ASSOCIATED WITH Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); FOUND IN endoplasmic reticulum (ortholog) 6 22673071 22680557 + 116903253 MODEL JAAIVD010000024;XM_032905635 XP_032761526 tapasin-related protein protein-coding 625979837 LOC116885044 small nucleolar RNA SNORA17 15 11635073 11635203 + 116885044 MODEL JAAIVD010000010;XR_004385930 snorna 625979840 Bnip3 BCL2 interacting protein 3 ENCODES a protein that exhibits endoplasmic reticulum-autophagosome adaptor activity (ortholog); GTPase binding (ortholog); identical protein binding (ortholog); INVOLVED IN autophagic cell death (ortholog); brown fat cell differentiation (ortholog); cardiac muscle cell apoptotic process (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; intrinsic apoptotic pathway; mitochondrial autophagy pathway; ASSOCIATED WITH Chronic Intermittent Hypoxia (ortholog); chronic obstructive pulmonary disease (ortholog); congestive heart failure (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); endoplasmic reticulum membrane (ortholog) 2 62913006 62930228 + 22301074;30032202 116891369 MODEL JAAIVD010000001;XM_032892366 XP_032748257 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 protein-coding 625979850 Cfap263 cilia and flagella associated protein 263 INVOLVED IN cilium assembly (ortholog); FOUND IN centriolar satellite (ortholog); ciliary basal body (ortholog); protein-containing complex (ortholog) 17 2376127 2395742 + 30032202 116886260 MODEL JAAIVD010000011;XM_032887682 XP_032743573 Ccdc113 coiled-coil domain containing 113;coiled-coil domain-containing protein 113 protein-coding 625979863 Mmp9 matrix metallopeptidase 9 ENCODES a protein that exhibits endopeptidase activity (ortholog); fibronectin binding (ortholog); identical protein binding (ortholog); INVOLVED IN cell migration (ortholog); cellular response to cell-matrix adhesion (ortholog); cellular response to cytokine stimulus (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; syndecan signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Coronary Syndrome (ortholog); Acute Lung Injury (ortholog); FOUND IN extracellular matrix (ortholog); extracellular matrix of synaptic cleft (ortholog); extracellular region (ortholog) 5 153004445 153048368 - 22301074;30032202 116901088 A0A8A1UB38;A0A8A1UCT4 MODEL JAAIVD010000023;XM_032902652 XP_032758543 matrix metalloproteinase-9 protein-coding 625979882 Nelfb negative elongation factor complex member B ENCODES a protein that exhibits RNA polymerase inhibitor activity (ortholog); INVOLVED IN cell population proliferation (ortholog); negative regulation of stem cell differentiation (ortholog); negative regulation of transcription elongation by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; FOUND IN cytoplasm (ortholog); NELF complex (ortholog); nucleoplasm (ortholog) 5 11970116 11986272 + 22301074;30032202 116900029 MODEL JAAIVD010000023;XM_032901825 XP_032757716 negative elongation factor B protein-coding 625979898 LOC116890540 small nucleolar RNA SNORA17 1 227023628 227023759 + 116890540 MODEL JAAIVD010000025;XR_004386720 snorna 625979901 Cib1 calcium and integrin binding 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein kinase inhibitor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to growth factor stimulus (ortholog); cellular response to nerve growth factor stimulus (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Epidermodysplasia Verruciformis 3 (ortholog); Huntington's disease (ortholog); FOUND IN axon (ortholog); cell periphery (ortholog); centrosome (ortholog) 2 120019396 120025013 + 22301074 116891928 MODEL JAAIVD010000001;XM_032893364;XM_032893365 XP_032749255;XP_032749256 calcium and integrin-binding protein 1 protein-coding 625979915 Ccl24 C-C motif chemokine ligand 24 ENCODES a protein that exhibits CCR3 chemokine receptor binding (ortholog); chemokine activity (ortholog); cytokine activity (ortholog); INVOLVED IN chemokine-mediated signaling pathway (ortholog); chemotaxis (ortholog); cytoskeleton organization (ortholog); ASSOCIATED WITH allergic disease (ortholog); asthma (ortholog); atopic dermatitis (ortholog) 16 18442125 18444347 + 22301074;30032202 116885820 MODEL JAAIVD010000004;XM_032887161 XP_032743052 C-C motif chemokine 24 protein-coding 625979921 LOC116914869 disintegrin and metalloproteinase domain-containing protein 26A-like 13 44070153 44074397 - 22301074;30032202 116914869 MODEL JAAIVD010000008;XM_032919315 XP_032775206 protein-coding 625979926 LOC116888815 EKC/KEOPS complex subunit LAGE3-like X 127939615 127941712 - 30032202 116888815 MODEL JAAIVD010000014;XM_032890094 XP_032745985 protein-coding 625979934 Ropn1l rhophilin associated tail protein 1 like ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cilium movement (ortholog); flagellated sperm motility (ortholog); regulation of protein phosphorylation (ortholog); FOUND IN ciliary transition zone (ortholog); cilium (ortholog); cytoplasm (ortholog) 3 149358469 149369562 + 116895593 MODEL JAAIVD010000012;XM_032896818 XP_032752709 ropporin-1-like protein protein-coding 625979943 LOC116883476 dynactin subunit 4-like 14 42948608 42950564 + 116883476 MODEL JAAIVD010000009 pseudo 625979944 Pank2 pantothenate kinase 2 ENCODES a protein that exhibits pantothenate kinase activity (ortholog); INVOLVED IN aerobic respiration (ortholog); angiogenesis (ortholog); coenzyme A biosynthetic process (ortholog); ASSOCIATED WITH cone-rod dystrophy (ortholog); dystonia (ortholog); fundus dystrophy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial intermembrane space (ortholog) 5 110990477 111024489 + 22301074;30032202 116901990 MODEL JAAIVD010000023;XM_032904241;XM_032904242;XM_032904243;XM_032904244;XM_032904245;XM_032904246 XP_032760132;XP_032760133;XP_032760134;XP_032760135;XP_032760136;XP_032760137 pantothenate kinase 2, mitochondrial protein-coding 625979970 LOC116900416 olfactory receptor 4C46-like 5 70379680 70380594 + 22301074 116900416 MODEL JAAIVD010000023;XM_032902160 XP_032758051 protein-coding 625979973 Papola poly(A) polymerase alpha ENCODES a protein that exhibits poly(A) RNA polymerase activity (ortholog); INVOLVED IN co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway (ortholog); cytosolic mRNA polyadenylation (ortholog); mRNA 3'-end processing (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; FOUND IN nucleoplasm (ortholog) 7 123435771 123488303 + 22301074;30032202 116905441 MODEL JAAIVD010000026;XM_032908382;XM_032908383;XM_032908384;XM_032908385 XP_032764273;XP_032764274;XP_032764275;XP_032764276 protein-coding 625980005 LOC116894396 keratin-associated protein 20-2-like 2 157166723 157166893 + 116894396 MODEL JAAIVD010000001;XM_032896104 XP_032751995 protein-coding 625980008 LOC116900772 protein WFDC11-like 5 153293486 153296227 + 116900772 MODEL JAAIVD010000023;XM_032902484;XR_004387952 XP_032758375 protein-coding 625980017 Kcnh3 potassium voltage-gated channel subfamily H member 3 ENCODES a protein that exhibits inward rectifier potassium channel activity (ortholog); INVOLVED IN potassium ion transport (ortholog); FOUND IN plasma membrane (ortholog) 1 272030143 272048899 + 22301074;30032202 116884988 MODEL JAAIVD010000025;XM_032886212;XM_032886221 XP_032742103;XP_032742112 protein-coding 625980039 Tmem89 transmembrane protein 89 8 100197231 100198279 + 116907624 MODEL JAAIVD010000027;XM_032910681 XP_032766572 protein-coding 625980045 Lnp1 leukemia NUP98 fusion partner 1 ASSOCIATED WITH NEURODEVELOPMENTAL DISORDER WITH EPILEPSY AND HYPOPLASIA OF THE CORPUS CALLOSUM (ortholog) 4 41018928 41036834 - 116897919 MODEL JAAIVD010000003;XM_032899318;XM_032899319 XP_032755209;XP_032755210 protein-coding 625980056 Mchr1 melanin concentrating hormone receptor 1 ENCODES a protein that exhibits hormone binding (ortholog); melanin-concentrating hormone receptor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cell surface receptor signaling pathway (ortholog); energy homeostasis (ortholog); ASSOCIATED WITH morbid obesity (ortholog); obesity (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); ciliary membrane (ortholog); cilium (ortholog) 1 250985623 250989198 + 22301074;30032202 116913936 MODEL JAAIVD010000025;XM_032918202 XP_032774093 melanin-concentrating hormone receptor 1 protein-coding 625980062 LOC116904090 non-histone chromosomal protein HMG-17-like 1 150696242 150696514 + 22301074;30032202 116904090 MODEL JAAIVD010000025;XM_032906961 XP_032762852 protein-coding 625980065 LOC116893679 olfactory receptor 5A2-like 2 12362394 12363353 - 22301074;30032202 116893679 MODEL JAAIVD010000001;XM_032895396 XP_032751287 protein-coding 625980068 LOC116885467 U6 snRNA-associated Sm-like protein LSm6 1 89849341 89849559 + 116885467 MODEL JAAIVD010000025 pseudo 625980069 LOC116898593 40S ribosomal protein S26-like 4 177733626 177733975 - 116898593 MODEL JAAIVD010000003 pseudo 625980070 LOC116908443 U2 spliceosomal RNA 8 88146198 88146294 - 116908443 MODEL JAAIVD010000027 pseudo 625980071 LOC116884500 nucleotide exchange factor SIL1 15 8866747 9034797 + 116884500 MODEL JAAIVD010000010;XM_032885630 XP_032741521 protein-coding 625980082 Tlcd1 TLC domain containing 1 INVOLVED IN membrane assembly (ortholog); phospholipid homeostasis (ortholog); plasma membrane organization (ortholog); FOUND IN plasma membrane (ortholog) 9 92258287 92260352 - 30032202 116909413 MODEL JAAIVD010000002;XM_032912978;XM_032912979 XP_032768869;XP_032768870 TLC domain-containing protein 1 protein-coding 625980093 LOC116895562 uncharacterized LOC116895562 3 132723999 132725045 - 116895562 MODEL JAAIVD010000012;XR_004387289 ncrna 625980097 Hephl1 hephaestin like 1 ENCODES a protein that exhibits ferroxidase activity (ortholog); INVOLVED IN intracellular iron ion homeostasis (ortholog); ASSOCIATED WITH Lichen Planus Follicularis (ortholog); Pili Torti, Developmental Delay, Neurological Abnormalities (ortholog) 8 10850010 10915066 - 22301074;30032202 116906990 MODEL JAAIVD010000027;XM_032909916 XP_032765807 hephaestin-like protein 1 protein-coding 625980119 Arpc4 actin related protein 2/3 complex subunit 4 ENCODES a protein that exhibits actin filament binding (ortholog); enzyme binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN Arp2/3 complex-mediated actin nucleation (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; Rab family mediated signaling pathway; ASSOCIATED WITH Acute Otitis Media (ortholog); Developmental Delay, Language Impairment, and Ocular Abnormalities (ortholog); Down syndrome (ortholog); FOUND IN Arp2/3 protein complex (ortholog) 6 33151530 33162178 - 22301074;30032202 116903417 MODEL JAAIVD010000024;XM_032905940 XP_032761831 actin-related protein 2/3 complex subunit 4 protein-coding 625980129 Otud5 OTU deubiquitinase 5 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); deubiquitinase activity (ortholog); K48-linked deubiquitinase activity (ortholog); INVOLVED IN CD8-positive, alpha-beta T cell differentiation (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of interleukin-17 production (ortholog); ASSOCIATED WITH endocrine-cerebro-osteodysplasia syndrome (ortholog); Ependymomas (ortholog); genetic disease (ortholog); FOUND IN nucleus (ortholog) X 14258600 14292918 - 30032202 116888331 MODEL JAAIVD010000014;XM_032889603 XP_032745494 OTU domain-containing protein 5 protein-coding 625980143 LOC116889192 histone H3.3 type 1-like X 3261226 3261706 + 116889192 MODEL JAAIVD010000014 pseudo 625980144 Gpa33 glycoprotein A33 ASSOCIATED WITH Latent Tuberculosis (ortholog); FOUND IN plasma membrane (ortholog) 10 45222444 45257722 + 30032202 116911194 MODEL JAAIVD010000005;XM_032915065 XP_032770956 cell surface A33 antigen protein-coding 625980155 Ptpn5 protein tyrosine phosphatase non-receptor type 5 ENCODES a protein that exhibits identical protein binding (ortholog); phosphotyrosine residue binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN exploration behavior (ortholog); negative regulation of MAP kinase activity (ortholog); peptidyl-tyrosine dephosphorylation (ortholog); PARTICIPATES IN dopamine signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Brain Hypoxia-Ischemia (ortholog); Nerve Degeneration (ortholog); FOUND IN axon (ortholog); neuronal cell body (ortholog); perikaryon (ortholog) 2 152239601 152296567 + 22301074;30032202 116892088 MODEL JAAIVD010000001;XM_032893563 XP_032749454 tyrosine-protein phosphatase non-receptor type 5 protein-coding 625980174 Nsrp1 nuclear speckle splicing regulatory protein 1 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN developmental process (ortholog); in utero embryonic development (ortholog); positive regulation of adipose tissue development (ortholog); ASSOCIATED WITH epilepsy (ortholog); NEURODEVELOPMENTAL DISORDER WITH SPASTICITY, SEIZURES, AND BRAIN ABNORMALITIES (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 9 95721757 95755075 - 22301074 116909400 MODEL JAAIVD010000002;XM_032912966 XP_032768857 protein-coding 625980185 LOC116885692 bcl-2-like protein 2 1 4598 5083 - 30032202 116885692 MODEL JAAIVD010000025;XM_032887000 XP_032742891 protein-coding 625980188 Ccdc93 CCC complex scaffolding subunit CCDC93 INVOLVED IN aorta development (ortholog); artery development (ortholog); endocytic recycling (ortholog); FOUND IN plasma membrane (ortholog); protein-containing complex (ortholog) 10 14025488 14095153 + 30032202 116911053 MODEL JAAIVD010000005;XM_032914806 XP_032770697 coiled-coil domain containing 93;coiled-coil domain-containing protein 93 protein-coding 625980216 Tac3 tachykinin precursor 3 ENCODES a protein that exhibits neuromedin K receptor binding (ortholog); receptor ligand activity (ortholog); substance K receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); phospholipase C-activating tachykinin receptor signaling pathway (ortholog); positive regulation of blood pressure (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Delayed Puberty (ortholog); hypertension (ortholog); FOUND IN extracellular region (ortholog) 1 206172835 206179279 + 22301074;30032202 116890046 MODEL JAAIVD010000025;XM_032890817 XP_032746708 tachykinin-3 protein-coding 625980227 Tead3 TEA domain transcription factor 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN asymmetric neuroblast division (ortholog); hippo signaling (ortholog); positive regulation of stem cell population maintenance (ortholog); FOUND IN transcription regulator complex (ortholog) 18 5508992 5528877 + 22301074;30032202 116887580 MODEL JAAIVD010000013;XM_032889205 XP_032745096 transcriptional enhancer factor TEF-5 protein-coding 625980244 LOC116887649 histone deacetylase complex subunit SAP18-like 18 19031825 19032290 + 116887649 MODEL JAAIVD010000013 pseudo 625980245 Cpa3 carboxypeptidase A3 ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN angiotensin maturation (ortholog); regulation of angiotensin levels in blood (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN extracellular region (ortholog) 3 133896600 133923010 + 22301074;30032202 116895567 MODEL JAAIVD010000012;XM_032896800;XM_032896801 XP_032752691;XP_032752692 mast cell carboxypeptidase A protein-coding 625980265 LOC116891873 olfactory receptor 14A2-like 2 114427660 114428667 + 22301074;30032202 116891873 MODEL JAAIVD010000001;XM_032893273 XP_032749164 protein-coding 625980268 LOC116900334 protein cornichon homolog 1-like 5 65001650 65002370 + 116900334 MODEL JAAIVD010000023 pseudo 625980269 Larp1 La ribonucleoprotein 1, translational regulator ENCODES a protein that exhibits eukaryotic initiation factor 4E binding (ortholog); mRNA 3'-UTR binding (ortholog); mRNA 5'-UTR binding (ortholog); INVOLVED IN cell population proliferation (ortholog); cellular response to rapamycin (ortholog); mRNA stabilization (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) 9 40170459 40261310 - 22301074;30032202 116910044 MODEL JAAIVD010000002;XM_032913832;XM_032913833 XP_032769723;XP_032769724 la-related protein 1 protein-coding 625980295 Bet1 Bet1 golgi vesicular membrane trafficking protein INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); vesicle fusion with Golgi apparatus (ortholog); ASSOCIATED WITH congenital muscular dystrophy with rapid progression (ortholog); COVID-19 (ortholog); epilepsy (ortholog); FOUND IN cis-Golgi network (ortholog); endoplasmic reticulum (ortholog); Golgi cis cisterna (ortholog) 6 134439269 134449171 + 30032202 116904105 MODEL JAAIVD010000024;XM_032906977 XP_032762868 BET1 homolog protein-coding 625980303 Glrx2 glutaredoxin 2 ENCODES a protein that exhibits protein-disulfide reductase activity (ortholog); INVOLVED IN cellular response to superoxide (ortholog); FOUND IN dendrite (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 10 23657878 23666318 + 116911719 MODEL JAAIVD010000005;XM_032915691 XP_032771582 protein-coding 625980311 Gpr83 G protein-coupled receptor 83 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); neuropeptide receptor activity (ortholog); INVOLVED IN feeding behavior (ortholog); G protein-coupled receptor signaling pathway (ortholog); neuropeptide signaling pathway (ortholog); FOUND IN cilium (ortholog); non-motile cilium (ortholog); plasma membrane (ortholog) 8 10649658 10659928 + 22301074;30032202 116907842 MODEL JAAIVD010000027;XM_032911031 XP_032766922 probable G-protein coupled receptor 83 protein-coding 625980319 LOC116888687 uncharacterized LOC116888687 X 14704067 14705075 + 116888687 MODEL JAAIVD010000014;XR_004386336 ncrna 625980323 LOC116887095 keratin-associated protein 10-12-like 18 1031035 1031922 - 22301074;30032202 116887095 MODEL JAAIVD010000013;XM_032888605;XM_032888606 XP_032744496;XP_032744497 keratin-associated protein 10-7-like protein-coding 625980330 Lrrc14b leucine rich repeat containing 14B 2 203788277 203792236 - 30032202 116892923 MODEL JAAIVD010000001;XM_032894849 XP_032750740 leucine-rich repeat-containing protein 14B protein-coding 625980336 Crybg3 crystallin beta-gamma domain containing 3 ENCODES a protein that exhibits protein kinase A binding (ortholog); FOUND IN protein-containing complex (ortholog) 4 43324529 43427416 - 30032202 116898922 MODEL JAAIVD010000003;XM_032900330 XP_032756221 very large A-kinase anchor protein protein-coding 625980362 Pdrg1 p53 and DNA damage regulated 1 ASSOCIATED WITH Liver Neoplasms (ortholog) 5 132328715 132334870 - 116902132 MODEL JAAIVD010000023;XM_032904459 XP_032760350 p53 and DNA damage-regulated protein 1 protein-coding 625980371 Alpl alkaline phosphatase, biomineralization associated ENCODES a protein that exhibits alkaline phosphatase activity (ortholog); calcium ion binding (ortholog); phosphoamidase activity (ortholog); INVOLVED IN bone mineralization (ortholog); calcium ion homeostasis (ortholog); cementum mineralization (ortholog); PARTICIPATES IN hypophosphatasia pathway; vitamin B6 metabolic pathway; ASSOCIATED WITH adult hypophosphatasia (ortholog); alpha thalassemia-X-linked intellectual disability syndrome (ortholog); Alveolar Bone Loss (ortholog); FOUND IN extracellular matrix (ortholog); extracellular membrane-bounded organelle (ortholog); extracellular region (ortholog) 1 20427302 20481875 + 30032202 116894122 MODEL JAAIVD010000025;XM_032895843 XP_032751734 alkaline phosphatase, tissue-nonspecific isozyme protein-coding 625980387 Redic1 regulator of DNA class I crossover intermediates 1 ASSOCIATED WITH spermatogenic failure (ortholog) 1 264192223 264250501 + 116890288 MODEL JAAIVD010000025;XM_032891003 XP_032746894 C1H12orf40 chromosome 1 C12orf40 homolog;uncharacterized protein C12orf40 homolog protein-coding 625980399 LOC116914623 heterogeneous nuclear ribonucleoprotein A3-like 13 5483590 5484688 - 116914623 MODEL JAAIVD010000008 pseudo 625980400 LOC116888672 THO complex subunit 1-like X 39527398 39544671 - 22301074;30032202 116888672 MODEL JAAIVD010000014;XM_032889971 XP_032745862 protein-coding 625980406 Tyr tyrosinase ENCODES a protein that exhibits copper ion binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cell population proliferation (ortholog); eye pigmentation (ortholog); melanin biosynthetic process (ortholog); PARTICIPATES IN alkaptonuria pathway; disulfiram pharmacodynamics pathway; dopamine beta-hydroxylase deficiency pathway; ASSOCIATED WITH Albinism (ortholog); basal cell carcinoma (ortholog); breast cancer (ortholog); FOUND IN cytoplasm (ortholog); melanosome (ortholog); perinuclear region of cytoplasm (ortholog) 2 113783844 113860781 + 30032202 116894238 MODEL JAAIVD010000001;XM_032895943 XP_032751834 protein-coding 625980414 LOC116899407 ral GTPase-activating protein subunit beta-like 4 132549181 132552990 - 22301074;30032202 116899407 MODEL JAAIVD010000003;XM_032901144 XP_032757035 protein-coding 625980419 LOC116893063 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1-like 2 35260780 35295690 - 116893063 MODEL JAAIVD010000001;XM_032895023 XP_032750914 protein-coding 625980424 Timp2 TIMP metallopeptidase inhibitor 2 ENCODES a protein that exhibits enzyme activator activity (ortholog); integrin binding (ortholog); metalloendopeptidase inhibitor activity (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); negative regulation of metallopeptidase activity (ortholog); negative regulation of mitotic cell cycle (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); Alzheimer's disease (ortholog); Brain Injuries (ortholog); FOUND IN basement membrane (ortholog); cell surface (ortholog); extracellular region (ortholog) 9 65703117 65752768 + 22301074;30032202 116908737 MODEL JAAIVD010000002;XM_032912084 XP_032767975 metalloproteinase inhibitor 2 protein-coding 625980433 LOC116902571 small nucleolar RNA SNORA17 5 42861639 42861791 - 116902571 MODEL JAAIVD010000023 pseudo 625980434 LOC116890498 small nucleolar RNA SNORA48 1 239307802 239307945 - 116890498 MODEL JAAIVD010000025;XR_004386684 snorna 625980437 Myl7 myosin light chain 7 ASSOCIATED WITH Down syndrome (ortholog); hypertrophic cardiomyopathy (ortholog); FOUND IN A band (ortholog); dendritic spine (ortholog) 11 74853315 74856103 - 22301074;30032202 116912295 MODEL JAAIVD010000006;XM_032916298 XP_032772189 myosin regulatory light chain 2, atrial isoform protein-coding 625980447 LOC116897847 high mobility group protein B1-like 4 15023046 15023908 - 116897847 MODEL JAAIVD010000003 pseudo 625980448 LOC116906360 small nucleolar RNA SNORD113/SNORD114 family 7 127258648 127258722 + 116906360 MODEL JAAIVD010000026;XR_004388631 snorna 625980451 Tfb2m transcription factor B2, mitochondrial ENCODES a protein that exhibits mitochondrial transcription factor activity (ortholog); INVOLVED IN mitochondrial transcription (ortholog); transcription initiation at mitochondrial promoter (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog); mitochondrion (ortholog) 10 57868297 57885903 - 22301074;30032202 116911794 MODEL JAAIVD010000005;XM_032915797 XP_032771688 dimethyladenosine transferase 2, mitochondrial protein-coding 625980463 LOC116893710 olfactory receptor 5B3-like 2 13388665 13389597 - 22301074;30032202 116893710 MODEL JAAIVD010000001;XM_032895427 XP_032751318 protein-coding 625980466 LOC116902187 60S ribosomal protein L17-like 5 135027735 135028212 + 116902187 MODEL JAAIVD010000023 pseudo 625980467 LOC116894598 vomeronasal type-1 receptor 4-like 2 181619465 181620394 - 116894598 MODEL JAAIVD010000001 pseudo 625980468 Tmem131l transmembrane 131 like INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of immature T cell proliferation in thymus (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) 3 69540878 69675163 + 30032202 116896741 MODEL JAAIVD010000012;XM_032898174;XM_032898175;XM_032898177;XM_032898178;XM_032898179 XP_032754065;XP_032754066;XP_032754068;XP_032754069;XP_032754070 transmembrane protein 131-like protein-coding 625980516 LOC116906421 small nucleolar RNA SNORA42/SNORA80 family 7 37333558 37333691 + 116906421 MODEL JAAIVD010000026;XR_004388683 snorna 625980519 R3hdm2 R3H domain containing 2 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); systemic juvenile rheumatoid arthritis (ortholog); FOUND IN nucleoplasm (ortholog) 1 205820913 205948919 + 22301074 116910049 MODEL JAAIVD010000025;XM_032913844;XM_032913853;XM_032913862;XM_032913869;XM_032913876;XM_032913884;XM_032913892;XM_032913899;XM_032913907;XM_032913915;XM_032913922;XM_032913931;XM_032913938;XM_032913944;XM_032913953;XM_032913961;XM_032913968;XM_032913975 XP_032769735;XP_032769744;XP_032769753;XP_032769760;XP_032769767;XP_032769775;XP_032769783;XP_032769790;XP_032769798;XP_032769806;XP_032769813;XP_032769822;XP_032769829;XP_032769835;XP_032769844;XP_032769852;XP_032769859;XP_032769866 R3H domain-containing protein 2 protein-coding 625980576 Fancg FA complementation group G INVOLVED IN DNA damage response (ortholog); mitochondrion organization (ortholog); ovarian follicle development (ortholog); ASSOCIATED WITH Fanconi anemia (ortholog); Fanconi anemia complementation group A (ortholog); Fanconi anemia complementation group G (ortholog); FOUND IN chromatin (ortholog); mitochondrion (ortholog); nuclear speck (ortholog) 1 3496036 3503825 + 22301074;30032202 116891201 A0A8A1UEH1 MODEL JAAIVD010000025;XM_032892031;XM_032892038 XP_032747922;XP_032747929 Fanconi anemia group G protein protein-coding 625980598 Hrc histidine rich calcium binding protein ENCODES a protein that exhibits ATPase binding (ortholog); calcium ion binding (ortholog); calcium ion sequestering activity (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); negative regulation of calcium ion import into sarcoplasmic reticulum (ortholog); negative regulation of cytosolic calcium ion concentration (ortholog); ASSOCIATED WITH Body Weight (ortholog); Cardiac Fibrosis (ortholog); Cardiomegaly (ortholog); FOUND IN endoplasmic reticulum (ortholog); sarcoplasmic reticulum (ortholog); sarcoplasmic reticulum membrane (ortholog) 2 154171191 154175316 - 30032202 116892156 MODEL JAAIVD010000001;XM_032893652 XP_032749543 sarcoplasmic reticulum histidine-rich calcium-binding protein protein-coding 625980606 Apmap adipocyte plasma membrane associated protein ENCODES a protein that exhibits arylesterase activity (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cell surface (ortholog); membrane (ortholog) 5 130292430 130316315 - 22301074 116902095 MODEL JAAIVD010000023;XM_032904392;XM_032904393;XM_032904394;XM_032904395 XP_032760283;XP_032760284;XP_032760285;XP_032760286 adipocyte plasma membrane-associated protein protein-coding 625980631 LOC116907952 UHRF1-binding protein 1-like 1 168884499 168890089 + 116907952 MODEL JAAIVD010000025;XM_032911178 XP_032767069 protein-coding 625980637 Dctn6 dynactin subunit 6 ENCODES a protein that exhibits dynein complex binding (ortholog); INVOLVED IN dynein-driven meiotic oscillatory nuclear movement (ortholog); microtubule-based process (ortholog); mitotic spindle organization (ortholog); PARTICIPATES IN mitochondria transport pathway; FOUND IN centrosome (ortholog); dynactin complex (ortholog) 13 52925676 52937235 + 30032202 116914676 MODEL JAAIVD010000008;XM_032919082 XP_032774973 protein-coding 625980648 LOC116906752 POU domain, class 5, transcription factor 1-like 8 40675003 40676561 + 116906752 MODEL JAAIVD010000027 pseudo 625980649 Cdk5rap2 CDK5 regulatory subunit associated protein 2 ENCODES a protein that exhibits calmodulin binding (ortholog); gamma-tubulin binding (ortholog); microtubule binding (ortholog); INVOLVED IN brain development (ortholog); centriole replication (ortholog); centrosome cycle (ortholog); ASSOCIATED WITH coloboma (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) 1 82883603 83055450 + 22301074;30032202 116901176 MODEL JAAIVD010000025;XM_032902842 XP_032758733 CDK5 regulatory subunit-associated protein 2 protein-coding 625980690 Zpbp zona pellucida binding protein INVOLVED IN acrosome assembly (ortholog); binding of sperm to zona pellucida (ortholog); ASSOCIATED WITH spermatogenic failure 66 (ortholog); FOUND IN acrosomal vesicle (ortholog); cell body (ortholog); zona pellucida receptor complex (ortholog) 11 80234968 80397656 - 30032202 116912646 MODEL JAAIVD010000006;XM_032916764 XP_032772655 zona pellucida-binding protein 1 protein-coding 625980701 Med17 mediator complex subunit 17 ENCODES a protein that exhibits nuclear thyroid hormone receptor binding (ortholog); transcription coactivator activity (ortholog); transcription coregulator activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription initiation by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH endometriosis (ortholog); genetic disease (ortholog); infantile cerebral and cerebellar atrophy with postnatal progressive microcephaly (ortholog); FOUND IN mediator complex (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) 8 11059446 11076761 - 22301074;30032202 116906682 MODEL JAAIVD010000027;XM_032909474 XP_032765365 mediator of RNA polymerase II transcription subunit 17 protein-coding 625980717 Coil coilin ENCODES a protein that exhibits disulfide oxidoreductase activity (ortholog); identical protein binding (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); FOUND IN Cajal body (ortholog); female germ cell nucleus (ortholog); fibrillar center (ortholog) 9 81802502 81822717 - 30032202 116910193 MODEL JAAIVD010000002;XM_032914055 XP_032769946 protein-coding 625980729 LOC116891797 hemoglobin subunit beta-2 2 101816815 101818101 + 22301074;30032202 116891797 MODEL JAAIVD010000001;XM_032893151 XP_032749042 protein-coding 625980736 LOC116889502 U1 spliceosomal RNA X 110176301 110176490 - 116889502 MODEL JAAIVD010000014 pseudo 625980737 LOC116884085 small nucleolar RNA SNORA17 14 26768382 26768516 + 116884085 MODEL JAAIVD010000009;XR_004385828 snorna 625980740 LOC116884102 U2 spliceosomal RNA 14 75223282 75223352 - 116884102 MODEL JAAIVD010000009 pseudo 625980741 Slit3 slit guidance ligand 3 ENCODES a protein that exhibits Roundabout binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); aortic valve morphogenesis (ortholog); apoptotic process involved in luteolysis (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Brain Injuries (ortholog); congenital diaphragmatic hernia (ortholog); FOUND IN cell junction (ortholog); extracellular region (ortholog) 9 18295966 18884171 + 22301074;30032202 116909579 MODEL JAAIVD010000002;XM_032913200 XP_032769091 slit homolog 3 protein protein-coding 625980781 Trnak-uuu transfer RNA lysine (anticodon UUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 12103263 12103335 - 116895138 MODEL JAAIVD010000001 trna 625980782 Tas1r1 taste 1 receptor member 1 ENCODES a protein that exhibits taste receptor activity (ortholog); INVOLVED IN sensory perception of umami taste (ortholog) 1 8701445 8712898 + 22301074;30032202 116892371 MODEL JAAIVD010000025;XM_032894036 XP_032749927 taste receptor type 1 member 1 protein-coding 625980791 Mterf2 mitochondrial transcription termination factor 2 ENCODES a protein that exhibits DNA binding (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN mitochondrial nucleoid (ortholog); mitochondrion (ortholog) 1 163313933 163323780 + 22301074;30032202 116907369 MODEL JAAIVD010000025;XM_032910325;XM_032910332;XR_004388823 XP_032766216;XP_032766223 transcription termination factor 2, mitochondrial protein-coding 625980804 LOC116884938 histone-lysine N-methyltransferase EZH2-like 15 22212526 22215285 + 116884938 MODEL JAAIVD010000010 pseudo 625980805 LOC116898227 peptidyl-prolyl cis-trans isomerase A-like 4 148176452 148176948 - 116898227 MODEL JAAIVD010000003 pseudo 625980806 LOC116895665 AKT-interacting protein-like 3 193414936 193416051 + 116895665 MODEL JAAIVD010000012 pseudo 625980807 LOC116900351 olfactory receptor 5W2-like 5 69068017 69068955 - 22301074;30032202 116900351 MODEL JAAIVD010000023;XM_032902104 XP_032757995 protein-coding 625980810 Tfdp2 transcription factor Dp-2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN heart development (ortholog); negative regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH COVID-19 (ortholog); malignant mesothelioma (ortholog); FOUND IN nucleoplasm (ortholog); RNA polymerase II transcription regulator complex (ortholog) 8 87629477 87763412 + 22301074;30032202 116907040 MODEL JAAIVD010000027;XM_032909989;XM_032909990;XM_032909991;XM_032909992;XM_032909993;XM_032909994;XM_032909995 XP_032765880;XP_032765881;XP_032765882;XP_032765883;XP_032765884;XP_032765885;XP_032765886 protein-coding 625980848 Prr7 proline rich 7, synaptic ENCODES a protein that exhibits long-chain fatty acid binding (ortholog); protein tyrosine kinase binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); postsynapse to nucleus signaling pathway (ortholog); regulation of transcription by RNA polymerase I (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); neuron projection (ortholog) 14 73780510 73789129 + 116883306 MODEL JAAIVD010000009;XM_032884354 XP_032740245 proline-rich protein 7 protein-coding 625980855 Mbd6 methyl-CpG binding domain protein 6 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN chromocenter (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 205716734 205725350 - 22301074;30032202 116909914 MODEL JAAIVD010000025;XM_032913679;XM_032913687;XM_032913696;XM_032913703;XM_032913711;XM_032913719;XM_032913729;XM_032913735;XR_004389115 XP_032769570;XP_032769578;XP_032769587;XP_032769594;XP_032769602;XP_032769610;XP_032769620;XP_032769626 methyl-CpG-binding domain protein 6 protein-coding 625980899 LOC116901073 igE-binding protein-like 5 142847054 142848847 - 22301074 116901073 MODEL JAAIVD010000023;XM_032902639 XP_032758530 protein-coding 625980903 Syap1 synapse associated protein 1 INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); cellular response to insulin stimulus (ortholog); cellular response to insulin-like growth factor stimulus (ortholog); FOUND IN axon (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) X 23475294 23509347 + 30032202 116888535 MODEL JAAIVD010000014;XM_032889830 XP_032745721 synapse-associated protein 1 protein-coding 625980916 Cep126 centrosomal protein 126 INVOLVED IN cilium assembly (ortholog); cytoplasmic microtubule organization (ortholog); mitotic spindle organization (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN centrosome (ortholog); ciliary base (ortholog); midbody (ortholog) 8 4239602 4299741 - 22301074;30032202 116906758 MODEL JAAIVD010000027;XM_032909586;XM_032909587;XM_032909589;XM_032909590;XM_032909591;XM_032909592 XP_032765477;XP_032765478;XP_032765480;XP_032765481;XP_032765482;XP_032765483 centrosomal protein of 126 kDa protein-coding 625980945 LOC116883993 uncharacterized LOC116883993 14 814648 821422 - 116883993 MODEL JAAIVD010000009;XR_004385807 ncrna 625980950 Hjv hemojuvelin BMP co-receptor ENCODES a protein that exhibits BMP binding (ortholog); BMP receptor activity (ortholog); coreceptor activity (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); BMP signaling pathway (ortholog); cellular response to BMP stimulus (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH cholestasis (ortholog); Experimental Liver Cirrhosis (ortholog); hemochromatosis (ortholog); FOUND IN basolateral plasma membrane (ortholog); BMP receptor complex (ortholog); cell surface (ortholog) 3 60779233 60783026 - 30032202 116895404 MODEL JAAIVD010000012;XM_032896691 XP_032752582 hemojuvelin protein-coding 625980958 LOC116907949 olfactory receptor 7G1-like 8 14290013 14290960 + 22301074;30032202 116907949 MODEL JAAIVD010000027;XM_032911170 XP_032767061 protein-coding 625980961 Serpina7 serpin family A member 7