# RGD-PIPELINE: ftp-file-extracts # MODULE: annotations-version-1.1.9 (Oct 10, 2019) # GENERATED-ON: 2024/10/26 # PURPOSE: annotations about active Dog objects extracted from RGD database # ONTOLOGY: MP: Mammalian Phenotype # CONTACT: rgd.data@mcw.edu # FORMAT: tab delimited text # NOTES: multiple values in a single column are separated by '|' # #COLUMN INFORMATION: # #1 RGD_ID unique RGD_ID of the annotated object #2 OBJECT_SYMBOL official symbol of the annotated object #3 OBJECT_NAME official name of the annotated object #4 OBJECT_TYPE annotated object data type: one of ['gene','qtl','strain'] #5 TERM_ACC_ID ontology term accession id #6 TERM_NAME ontology term name #7 QUALIFIER optional qualifier #8 EVIDENCE evidence #9 WITH with info #10 ASPECT aspect #11 REFERENCES db references (Reference RGDID|PUBMED ID) #12 CREATED_DATE created date #13 ASSIGNED_BY assigned by #14 MESH_OMIM_ID MESH:xxx or OMIM:xxx id corresponding to RDO:xxx id found in TERM_ACC_ID column (RGD/CTD Disease Ontology annotations only) #15 CURATION_NOTES curation notes provided by RGD curators #16 ORIGINAL_REFERENCE original reference RGD_ID OBJECT_SYMBOL OBJECT_NAME OBJECT_TYPE TERM_ACC_ID TERM_NAME QUALIFIER EVIDENCE WITH ASPECT REFERENCES CREATED_DATE ASSIGNED_BY MESH_OMIM_ID CURATION_NOTES ORIGINAL_REFERENCE 12090012 KIT KIT proto-oncogene, receptor tyrosine kinase gene MP:0002938 white spotting IAGP N RGD:12801476 20210603 OMIA Coat colour, white spotting, KIT-related PMID:23134432|PMID:23659249 12153264 KRT71 keratin 71 gene MP:0000410 waved hair IAGP N RGD:12801476 20230823 OMIA Curly coat PMID:19713490|PMID:22971920|PMID:27994129|PMID:30444027|PMID:30456859|PMID:31658272|PMID:34196995|PMID:36427679|PMID:37582787 12175281 MC1R melanocortin 1 receptor gene MP:0012017 grizzled coat color IAGP N RGD:12801476 20230823 OMIA Coat colour, grizzle PMID:20525767|PMID:29932470|PMID:34751460|PMID:35595349|PMID:35510419|PMID:37582787 12233617 MSTN myostatin gene MP:0009461 skeletal muscle hypertrophy IAGP N RGD:12801476 20230517 OMIA Muscular hypertrophy (double muscling) PMID:17530926|PMID:17651971|PMID:21175702|PMID:30125951|PMID:33854530|PMID:26459633|PMID:17884234 12262328 RSPO2 R-spondin 2 gene MP:0000418 focal hair loss IAGP N RGD:12801476 20210603 OMIA Improper coat PMID:20562213|PMID:27994129 12293696 MITF melanocyte inducing transcription factor gene MP:0002938 white spotting IAGP N RGD:12801476 20230118 OMIA Coat colour, white spotting PMID:2323567|PMID:15475400|PMID:17906626|PMID:11178229|PMID:18704695|PMID:17121617|PMID:17548862|PMID:20224736|PMID:25116146|PMID:31658272|PMID:33539602|PMID:33672409|PMID:34165209|PMID:34751460|PMID:35510420|PMID:31027231|PMID:35510419 12317503 FGF5 fibroblast growth factor 5 gene MP:0002881 long hair IAGP N RGD:12801476 20231004 OMIA Hair, long PMID:731015|PMID:18505865|PMID:19713490|PMID:16879338|PMID:15812847|PMID:23384345|PMID:27994129|PMID:31658272|PMID:33863806|PMID:37582787|PMID:37778752 12372074 TBXT T-box transcription factor T gene MP:0000592 short tail IAGP N RGD:12801476 20240724 OMIA Tail, short PMID:11252170|PMID:18505865|PMID:18854372|PMID:17850278|PMID:31658272|PMID:36848350|PMID:37277858|PMID:37582787|PMID:28855671