{ "session": { "name": "GSE266139_RNAseq_expression", "description": "Auto-generated session for GSE266139 on 2026-06-10T16:57:42", "views": [ { "id": "lgv1", "type": "LinearGenomeView", "tracks": [ { "id": "F-8qwRhumS", "type": "FeatureTrack", "configuration": "Rat GRCr8 (rn8) Genes and Transcripts-GRCr8", "minimized": false, "displays": [ { "id": "uZq89S4_XC", "type": "LinearBasicDisplay", "heightPreConfig": 152, "configuration": "Rat GRCr8 (rn8) Genes and Transcripts-GRCr8-LinearBasicDisplay" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_SD_M_GSM8241338", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_SD_M_GSM8241338-LinearWiggleDisplay", "color": "#1f77b4", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_SD_M_GSM8241339", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_SD_M_GSM8241339-LinearWiggleDisplay", "color": "#1f77b4", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_SD_M_GSM8241340", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_SD_M_GSM8241340-LinearWiggleDisplay", "color": "#1f77b4", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_SD_M_GSM8241341", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_SD_M_GSM8241341-LinearWiggleDisplay", "color": "#1f77b4", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_SD_M_GSM8241342", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_SD_M_GSM8241342-LinearWiggleDisplay", "color": "#1f77b4", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_SD_M_GSM8241343", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_SD_M_GSM8241343-LinearWiggleDisplay", "color": "#ff7f0e", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_SD_M_GSM8241344", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_SD_M_GSM8241344-LinearWiggleDisplay", "color": "#ff7f0e", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_SD_M_GSM8241345", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_SD_M_GSM8241345-LinearWiggleDisplay", "color": "#ff7f0e", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_SD_M_GSM8241346", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_SD_M_GSM8241346-LinearWiggleDisplay", "color": "#ff7f0e", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_SD_M_GSM8241347", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_SD_M_GSM8241347-LinearWiggleDisplay", "color": "#ff7f0e", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_SD_M_GSM8241348", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_SD_M_GSM8241348-LinearWiggleDisplay", "color": "#2ca02c", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_SD_M_GSM8241349", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_SD_M_GSM8241349-LinearWiggleDisplay", "color": "#2ca02c", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_SD_M_GSM8241350", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_SD_M_GSM8241350-LinearWiggleDisplay", "color": "#2ca02c", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_SD_M_GSM8241351", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_SD_M_GSM8241351-LinearWiggleDisplay", "color": "#2ca02c", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_SD_M_GSM8241352", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_SD_M_GSM8241352-LinearWiggleDisplay", "color": "#2ca02c", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_SD_M_GSM8241353", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_SD_M_GSM8241353-LinearWiggleDisplay", "color": "#d62728", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_SD_M_GSM8241354", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_SD_M_GSM8241354-LinearWiggleDisplay", "color": "#d62728", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_SD_M_GSM8241355", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_SD_M_GSM8241355-LinearWiggleDisplay", "color": "#d62728", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_SD_M_GSM8241356", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_SD_M_GSM8241356-LinearWiggleDisplay", "color": "#d62728", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_SD_M_GSM8241357", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_SD_M_GSM8241357-LinearWiggleDisplay", "color": "#d62728", "defaultRendering": "xyplot" } ] } ], "displayedRegions": [ { "assemblyName": "GRCr8", "refName": "Chr4", "start": 0, "end": 1000000000 } ], "bpPerPx": 1090.9315, "offsetPx": 11288.767443235438 } ], "sessionTracks": [ { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_SD_M_GSM8241338", "name": "RNAseq_heart_left_ventricle_SD_M_GSM8241338", "category": [ "RNA-Seq", "heart_left_ventricle", "SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "adult; sodium chloride solution", "Tissue": "heart_left_ventricle", "Strain": "SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=70508", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE266139", "Project Title": "Transcriptomic analysis of the left and right ventricles in a rat model of pulmonary hypertension", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE266139", "Project Accession ID": "GSE266139", "Sample Accession ID": "GSM8241338", "PubMed ID": "PMID:40652243", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE266139/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_SD_M_GSM8241338.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_SD_M_GSM8241338-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_SD_M_GSM8241339", "name": "RNAseq_heart_left_ventricle_SD_M_GSM8241339", "category": [ "RNA-Seq", "heart_left_ventricle", "SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "adult; sodium chloride solution", "Tissue": "heart_left_ventricle", "Strain": "SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=70508", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE266139", "Project Title": "Transcriptomic analysis of the left and right ventricles in a rat model of pulmonary hypertension", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE266139", "Project Accession ID": "GSE266139", "Sample Accession ID": "GSM8241339", "PubMed ID": "PMID:40652243", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE266139/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_SD_M_GSM8241339.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_SD_M_GSM8241339-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_SD_M_GSM8241340", "name": "RNAseq_heart_left_ventricle_SD_M_GSM8241340", "category": [ "RNA-Seq", "heart_left_ventricle", "SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "adult; sodium chloride solution", "Tissue": "heart_left_ventricle", "Strain": "SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=70508", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE266139", "Project Title": "Transcriptomic analysis of the left and right ventricles in a rat model of pulmonary hypertension", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE266139", "Project Accession ID": "GSE266139", "Sample Accession ID": "GSM8241340", "PubMed ID": "PMID:40652243", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE266139/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_SD_M_GSM8241340.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_SD_M_GSM8241340-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_SD_M_GSM8241341", "name": "RNAseq_heart_left_ventricle_SD_M_GSM8241341", "category": [ "RNA-Seq", "heart_left_ventricle", "SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "adult; sodium chloride solution", "Tissue": "heart_left_ventricle", "Strain": "SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=70508", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE266139", "Project Title": "Transcriptomic analysis of the left and right ventricles in a rat model of pulmonary hypertension", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE266139", "Project Accession ID": "GSE266139", "Sample Accession ID": "GSM8241341", "PubMed ID": "PMID:40652243", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE266139/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_SD_M_GSM8241341.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_SD_M_GSM8241341-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_SD_M_GSM8241342", "name": "RNAseq_heart_left_ventricle_SD_M_GSM8241342", "category": [ "RNA-Seq", "heart_left_ventricle", "SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "adult; sodium chloride solution", "Tissue": "heart_left_ventricle", "Strain": "SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=70508", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE266139", "Project Title": "Transcriptomic analysis of the left and right ventricles in a rat model of pulmonary hypertension", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE266139", "Project Accession ID": "GSE266139", "Sample Accession ID": "GSM8241342", "PubMed ID": "PMID:40652243", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE266139/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_SD_M_GSM8241342.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_SD_M_GSM8241342-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_SD_M_GSM8241343", "name": "RNAseq_heart_right_ventricle_SD_M_GSM8241343", "category": [ "RNA-Seq", "heart_right_ventricle", "SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "adult; sodium chloride solution", "Tissue": "heart_right_ventricle", "Strain": "SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=70508", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE266139", "Project Title": "Transcriptomic analysis of the left and right ventricles in a rat model of pulmonary hypertension", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE266139", "Project Accession ID": "GSE266139", "Sample Accession ID": "GSM8241343", "PubMed ID": "PMID:40652243", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE266139/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_SD_M_GSM8241343.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_SD_M_GSM8241343-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_SD_M_GSM8241344", "name": "RNAseq_heart_right_ventricle_SD_M_GSM8241344", "category": [ "RNA-Seq", "heart_right_ventricle", "SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "adult; sodium chloride solution", "Tissue": "heart_right_ventricle", "Strain": "SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=70508", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE266139", "Project Title": "Transcriptomic analysis of the left and right ventricles in a rat model of pulmonary hypertension", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE266139", "Project Accession ID": "GSE266139", "Sample Accession ID": "GSM8241344", "PubMed ID": "PMID:40652243", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE266139/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_SD_M_GSM8241344.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_SD_M_GSM8241344-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_SD_M_GSM8241345", "name": "RNAseq_heart_right_ventricle_SD_M_GSM8241345", "category": [ "RNA-Seq", "heart_right_ventricle", "SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "adult; sodium chloride solution", "Tissue": "heart_right_ventricle", "Strain": "SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=70508", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE266139", "Project Title": "Transcriptomic analysis of the left and right ventricles in a rat model of pulmonary hypertension", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE266139", "Project Accession ID": "GSE266139", "Sample Accession ID": "GSM8241345", "PubMed ID": "PMID:40652243", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE266139/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_SD_M_GSM8241345.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_SD_M_GSM8241345-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_SD_M_GSM8241346", "name": "RNAseq_heart_right_ventricle_SD_M_GSM8241346", "category": [ "RNA-Seq", "heart_right_ventricle", "SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "adult; sodium chloride solution", "Tissue": "heart_right_ventricle", "Strain": "SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=70508", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE266139", "Project Title": "Transcriptomic analysis of the left and right ventricles in a rat model of pulmonary hypertension", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE266139", "Project Accession ID": "GSE266139", "Sample Accession ID": "GSM8241346", "PubMed ID": "PMID:40652243", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE266139/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_SD_M_GSM8241346.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_SD_M_GSM8241346-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_SD_M_GSM8241347", "name": "RNAseq_heart_right_ventricle_SD_M_GSM8241347", "category": [ "RNA-Seq", "heart_right_ventricle", "SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "adult; sodium chloride solution", "Tissue": "heart_right_ventricle", "Strain": "SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=70508", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE266139", "Project Title": "Transcriptomic analysis of the left and right ventricles in a rat model of pulmonary hypertension", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE266139", "Project Accession ID": "GSE266139", "Sample Accession ID": "GSM8241347", "PubMed ID": "PMID:40652243", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE266139/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_SD_M_GSM8241347.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_SD_M_GSM8241347-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_SD_M_GSM8241348", "name": "RNAseq_heart_left_ventricle_SD_M_GSM8241348", "category": [ "RNA-Seq", "heart_left_ventricle", "SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "adult;60.0 mg/kg monocrotaline", "Tissue": "heart_left_ventricle", "Strain": "SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=70508", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE266139", "Project Title": "Transcriptomic analysis of the left and right ventricles in a rat model of pulmonary hypertension", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE266139", "Project Accession ID": "GSE266139", "Sample Accession ID": "GSM8241348", "PubMed ID": "PMID:40652243", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE266139/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_SD_M_GSM8241348.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_SD_M_GSM8241348-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_SD_M_GSM8241349", "name": "RNAseq_heart_left_ventricle_SD_M_GSM8241349", "category": [ "RNA-Seq", "heart_left_ventricle", "SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "adult;60.0 mg/kg monocrotaline", "Tissue": "heart_left_ventricle", "Strain": "SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=70508", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE266139", "Project Title": "Transcriptomic analysis of the left and right ventricles in a rat model of pulmonary hypertension", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE266139", "Project Accession ID": "GSE266139", "Sample Accession ID": "GSM8241349", "PubMed ID": "PMID:40652243", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE266139/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_SD_M_GSM8241349.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_SD_M_GSM8241349-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_SD_M_GSM8241350", "name": "RNAseq_heart_left_ventricle_SD_M_GSM8241350", "category": [ "RNA-Seq", "heart_left_ventricle", "SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "adult;60.0 mg/kg monocrotaline", "Tissue": "heart_left_ventricle", "Strain": "SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=70508", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE266139", "Project Title": "Transcriptomic analysis of the left and right ventricles in a rat model of pulmonary hypertension", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE266139", "Project Accession ID": "GSE266139", "Sample Accession ID": "GSM8241350", "PubMed ID": "PMID:40652243", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE266139/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_SD_M_GSM8241350.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_SD_M_GSM8241350-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_SD_M_GSM8241351", "name": "RNAseq_heart_left_ventricle_SD_M_GSM8241351", "category": [ "RNA-Seq", "heart_left_ventricle", "SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "adult;60.0 mg/kg monocrotaline", "Tissue": "heart_left_ventricle", "Strain": "SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=70508", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE266139", "Project Title": "Transcriptomic analysis of the left and right ventricles in a rat model of pulmonary hypertension", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE266139", "Project Accession ID": "GSE266139", "Sample Accession ID": "GSM8241351", "PubMed ID": "PMID:40652243", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE266139/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_SD_M_GSM8241351.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_SD_M_GSM8241351-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_SD_M_GSM8241352", "name": "RNAseq_heart_left_ventricle_SD_M_GSM8241352", "category": [ "RNA-Seq", "heart_left_ventricle", "SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "adult;60.0 mg/kg monocrotaline", "Tissue": "heart_left_ventricle", "Strain": "SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=70508", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE266139", "Project Title": "Transcriptomic analysis of the left and right ventricles in a rat model of pulmonary hypertension", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE266139", "Project Accession ID": "GSE266139", "Sample Accession ID": "GSM8241352", "PubMed ID": "PMID:40652243", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE266139/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_SD_M_GSM8241352.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_SD_M_GSM8241352-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_SD_M_GSM8241353", "name": "RNAseq_heart_right_ventricle_SD_M_GSM8241353", "category": [ "RNA-Seq", "heart_right_ventricle", "SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "adult;60.0 mg/kg monocrotaline", "Tissue": "heart_right_ventricle", "Strain": "SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=70508", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE266139", "Project Title": "Transcriptomic analysis of the left and right ventricles in a rat model of pulmonary hypertension", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE266139", "Project Accession ID": "GSE266139", "Sample Accession ID": "GSM8241353", "PubMed ID": "PMID:40652243", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE266139/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_SD_M_GSM8241353.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_SD_M_GSM8241353-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#d62728" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#d62728" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_SD_M_GSM8241354", "name": "RNAseq_heart_right_ventricle_SD_M_GSM8241354", "category": [ "RNA-Seq", "heart_right_ventricle", "SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "adult;60.0 mg/kg monocrotaline", "Tissue": "heart_right_ventricle", "Strain": "SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=70508", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE266139", "Project Title": "Transcriptomic analysis of the left and right ventricles in a rat model of pulmonary hypertension", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE266139", "Project Accession ID": "GSE266139", "Sample Accession ID": "GSM8241354", "PubMed ID": "PMID:40652243", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE266139/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_SD_M_GSM8241354.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_SD_M_GSM8241354-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#d62728" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#d62728" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_SD_M_GSM8241355", "name": "RNAseq_heart_right_ventricle_SD_M_GSM8241355", "category": [ "RNA-Seq", "heart_right_ventricle", "SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "adult;60.0 mg/kg monocrotaline", "Tissue": "heart_right_ventricle", "Strain": "SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=70508", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE266139", "Project Title": "Transcriptomic analysis of the left and right ventricles in a rat model of pulmonary hypertension", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE266139", "Project Accession ID": "GSE266139", "Sample Accession ID": "GSM8241355", "PubMed ID": "PMID:40652243", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE266139/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_SD_M_GSM8241355.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_SD_M_GSM8241355-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#d62728" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#d62728" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_SD_M_GSM8241356", "name": "RNAseq_heart_right_ventricle_SD_M_GSM8241356", "category": [ "RNA-Seq", "heart_right_ventricle", "SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "adult;60.0 mg/kg monocrotaline", "Tissue": "heart_right_ventricle", "Strain": "SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=70508", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE266139", "Project Title": "Transcriptomic analysis of the left and right ventricles in a rat model of pulmonary hypertension", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE266139", "Project Accession ID": "GSE266139", "Sample Accession ID": "GSM8241356", "PubMed ID": "PMID:40652243", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE266139/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_SD_M_GSM8241356.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_SD_M_GSM8241356-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#d62728" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#d62728" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_SD_M_GSM8241357", "name": "RNAseq_heart_right_ventricle_SD_M_GSM8241357", "category": [ "RNA-Seq", "heart_right_ventricle", "SD" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "adult;60.0 mg/kg monocrotaline", "Tissue": "heart_right_ventricle", "Strain": "SD", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=70508", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE266139", "Project Title": "Transcriptomic analysis of the left and right ventricles in a rat model of pulmonary hypertension", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE266139", "Project Accession ID": "GSE266139", "Sample Accession ID": "GSM8241357", "PubMed ID": "PMID:40652243", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE266139/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_SD_M_GSM8241357.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_SD_M_GSM8241357-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#d62728" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#d62728" } }, "defaultRendering": "xyplot" } ] } ] } }