{ "session": { "name": "GSE216264_RNAseq_expression", "description": "Auto-generated session for GSE216264 on 2026-04-09T09:15:37", "views": [ { "id": "lgv1", "type": "LinearGenomeView", "tracks": [ { "id": "F-8qwRhumS", "type": "FeatureTrack", "configuration": "Rat GRCr8 (rn8) Genes and Transcripts-GRCr8", "minimized": false, "displays": [ { "id": "uZq89S4_XC", "type": "LinearBasicDisplay", "heightPreConfig": 152, "configuration": "Rat GRCr8 (rn8) Genes and Transcripts-GRCr8-LinearBasicDisplay" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665240", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665240-LinearWiggleDisplay", "color": "#1f77b4", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665241", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665241-LinearWiggleDisplay", "color": "#ff7f0e", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665242", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665242-LinearWiggleDisplay", "color": "#1f77b4", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665243", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665243-LinearWiggleDisplay", "color": "#ff7f0e", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665244", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665244-LinearWiggleDisplay", "color": "#2ca02c", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665245", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665245-LinearWiggleDisplay", "color": "#d62728", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665246", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665246-LinearWiggleDisplay", "color": "#2ca02c", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665247", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665247-LinearWiggleDisplay", "color": "#d62728", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665248", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665248-LinearWiggleDisplay", "color": "#9467bd", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665249", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665249-LinearWiggleDisplay", "color": "#8c564b", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665250", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665250-LinearWiggleDisplay", "color": "#8c564b", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665251", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665251-LinearWiggleDisplay", "color": "#9467bd", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665252", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665252-LinearWiggleDisplay", "color": "#1f77b4", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665253", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665253-LinearWiggleDisplay", "color": "#ff7f0e", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665254", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665254-LinearWiggleDisplay", "color": "#2ca02c", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665255", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665255-LinearWiggleDisplay", "color": "#d62728", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665256", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665256-LinearWiggleDisplay", "color": "#8c564b", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665257", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665257-LinearWiggleDisplay", "color": "#9467bd", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665258", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665258-LinearWiggleDisplay", "color": "#1f77b4", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665259", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665259-LinearWiggleDisplay", "color": "#ff7f0e", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665260", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665260-LinearWiggleDisplay", "color": "#2ca02c", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665261", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665261-LinearWiggleDisplay", "color": "#d62728", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665262", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665262-LinearWiggleDisplay", "color": "#8c564b", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665263", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665263-LinearWiggleDisplay", "color": "#9467bd", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665264", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665264-LinearWiggleDisplay", "color": "#e377c2", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665265", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665265-LinearWiggleDisplay", "color": "#7f7f7f", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665266", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665266-LinearWiggleDisplay", "color": "#bcbd22", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665267", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665267-LinearWiggleDisplay", "color": "#17becf", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665268", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665268-LinearWiggleDisplay", "color": "#bcbd22", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665269", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665269-LinearWiggleDisplay", "color": "#17becf", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665270", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665270-LinearWiggleDisplay", "color": "#e377c2", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665271", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665271-LinearWiggleDisplay", "color": "#7f7f7f", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665272", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665272-LinearWiggleDisplay", "color": "#bcbd22", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665273", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665273-LinearWiggleDisplay", "color": "#17becf", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665274", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665274-LinearWiggleDisplay", "color": "#1f77b4", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665275", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665275-LinearWiggleDisplay", "color": "#ff7f0e", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665276", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665276-LinearWiggleDisplay", "color": "#1f77b4", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665277", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665277-LinearWiggleDisplay", "color": "#ff7f0e", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665278", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665278-LinearWiggleDisplay", "color": "#2ca02c", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665279", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665279-LinearWiggleDisplay", "color": "#d62728", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665280", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665280-LinearWiggleDisplay", "color": "#2ca02c", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665281", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665281-LinearWiggleDisplay", "color": "#d62728", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665282", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665282-LinearWiggleDisplay", "color": "#1f77b4", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665283", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665283-LinearWiggleDisplay", "color": "#ff7f0e", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665284", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665284-LinearWiggleDisplay", "color": "#2ca02c", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665285", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665285-LinearWiggleDisplay", "color": "#d62728", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665286", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665286-LinearWiggleDisplay", "color": "#2ca02c", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665287", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665287-LinearWiggleDisplay", "color": "#d62728", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665288", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665288-LinearWiggleDisplay", "color": "#1f77b4", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665289", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665289-LinearWiggleDisplay", "color": "#ff7f0e", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665290", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665290-LinearWiggleDisplay", "color": "#2ca02c", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665291", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665291-LinearWiggleDisplay", "color": "#d62728", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665292", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665292-LinearWiggleDisplay", "color": "#8c564b", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665293", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665293-LinearWiggleDisplay", "color": "#9467bd", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665294", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665294-LinearWiggleDisplay", "color": "#9467bd", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665295", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665295-LinearWiggleDisplay", "color": "#8c564b", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665296", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665296-LinearWiggleDisplay", "color": "#e377c2", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665297", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665297-LinearWiggleDisplay", "color": "#9467bd", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665298", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665298-LinearWiggleDisplay", "color": "#8c564b", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665299", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665299-LinearWiggleDisplay", "color": "#e377c2", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665300", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665300-LinearWiggleDisplay", "color": "#1f77b4", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665301", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665301-LinearWiggleDisplay", "color": "#ff7f0e", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665302", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665302-LinearWiggleDisplay", "color": "#1f77b4", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665303", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665303-LinearWiggleDisplay", "color": "#ff7f0e", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665304", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665304-LinearWiggleDisplay", "color": "#2ca02c", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665305", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665305-LinearWiggleDisplay", "color": "#d62728", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665306", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665306-LinearWiggleDisplay", "color": "#2ca02c", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665307", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665307-LinearWiggleDisplay", "color": "#d62728", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665308", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665308-LinearWiggleDisplay", "color": "#2ca02c", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665309", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665309-LinearWiggleDisplay", "color": "#d62728", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665310", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665310-LinearWiggleDisplay", "color": "#2ca02c", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665311", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665311-LinearWiggleDisplay", "color": "#d62728", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665312", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665312-LinearWiggleDisplay", "color": "#7f7f7f", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665313", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665313-LinearWiggleDisplay", "color": "#7f7f7f", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665314", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665314-LinearWiggleDisplay", "color": "#7f7f7f", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665315", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665315-LinearWiggleDisplay", "color": "#bcbd22", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665316", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665316-LinearWiggleDisplay", "color": "#bcbd22", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665317", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665317-LinearWiggleDisplay", "color": "#17becf", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665318", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665318-LinearWiggleDisplay", "color": "#17becf", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665319", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665319-LinearWiggleDisplay", "color": "#17becf", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665320", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665320-LinearWiggleDisplay", "color": "#1f77b4", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665321", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665321-LinearWiggleDisplay", "color": "#1f77b4", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665322", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665322-LinearWiggleDisplay", "color": "#1f77b4", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665323", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665323-LinearWiggleDisplay", "color": "#1f77b4", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665324", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665324-LinearWiggleDisplay", "color": "#8c564b", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665325", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665325-LinearWiggleDisplay", "color": "#8c564b", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665326", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665326-LinearWiggleDisplay", "color": "#8c564b", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665327", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665327-LinearWiggleDisplay", "color": "#8c564b", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665328", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665328-LinearWiggleDisplay", "color": "#e377c2", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665329", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665329-LinearWiggleDisplay", "color": "#e377c2", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665330", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665330-LinearWiggleDisplay", "color": "#e377c2", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665331", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665331-LinearWiggleDisplay", "color": "#e377c2", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665332", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665332-LinearWiggleDisplay", "color": "#9467bd", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665333", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665333-LinearWiggleDisplay", "color": "#9467bd", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665334", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665334-LinearWiggleDisplay", "color": "#9467bd", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665335", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665335-LinearWiggleDisplay", "color": "#9467bd", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665336", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665336-LinearWiggleDisplay", "color": "#9467bd", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665337", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665337-LinearWiggleDisplay", "color": "#8c564b", "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "configuration": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665338", "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665338-LinearWiggleDisplay", "color": "#e377c2", "defaultRendering": "xyplot" } ] } ], "displayedRegions": [ { "assemblyName": "GRCr8", "refName": "Chr4", "start": 0, "end": 1000000000 } ], "bpPerPx": 1090.9315, "offsetPx": 11288.767443235438 } ], "sessionTracks": [ { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665240", "name": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665240", "category": [ "RNA-Seq", "heart_left_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;49.0 days thoracic aorta constriction sham procedure", "Tissue": "heart_left_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665240", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665240.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665240-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665241", "name": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665241", "category": [ "RNA-Seq", "heart_right_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;49.0 days thoracic aorta constriction sham procedure", "Tissue": "heart_right_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665241", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665241.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665241-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665242", "name": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665242", "category": [ "RNA-Seq", "heart_left_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;49.0 days thoracic aorta constriction sham procedure", "Tissue": "heart_left_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665242", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665242.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665242-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665243", "name": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665243", "category": [ "RNA-Seq", "heart_right_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;49.0 days thoracic aorta constriction sham procedure", "Tissue": "heart_right_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665243", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665243.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665243-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665244", "name": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665244", "category": [ "RNA-Seq", "heart_left_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;1.1 mm dia 49.0 days pulmonary artery occlusion", "Tissue": "heart_left_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665244", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665244.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665244-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665245", "name": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665245", "category": [ "RNA-Seq", "heart_right_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;1.1 mm dia 49.0 days pulmonary artery occlusion", "Tissue": "heart_right_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665245", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665245.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665245-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#d62728" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#d62728" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665246", "name": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665246", "category": [ "RNA-Seq", "heart_left_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;1.1 mm dia 49.0 days pulmonary artery occlusion", "Tissue": "heart_left_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665246", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665246.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665246-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665247", "name": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665247", "category": [ "RNA-Seq", "heart_right_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;1.1 mm dia 49.0 days pulmonary artery occlusion", "Tissue": "heart_right_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665247", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665247.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665247-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#d62728" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#d62728" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665248", "name": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665248", "category": [ "RNA-Seq", "heart_right_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;0.6 mm dia 49.0 days thoracic aorta constriction", "Tissue": "heart_right_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665248", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665248.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665248-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#9467bd" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#9467bd" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665249", "name": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665249", "category": [ "RNA-Seq", "heart_left_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;0.6 mm dia 49.0 days thoracic aorta constriction", "Tissue": "heart_left_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665249", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665249.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665249-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#8c564b" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#8c564b" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665250", "name": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665250", "category": [ "RNA-Seq", "heart_left_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;0.6 mm dia 49.0 days thoracic aorta constriction", "Tissue": "heart_left_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665250", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665250.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665250-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#8c564b" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#8c564b" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665251", "name": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665251", "category": [ "RNA-Seq", "heart_right_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;0.6 mm dia 49.0 days thoracic aorta constriction", "Tissue": "heart_right_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665251", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665251.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665251-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#9467bd" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#9467bd" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665252", "name": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665252", "category": [ "RNA-Seq", "heart_left_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;49.0 days thoracic aorta constriction sham procedure", "Tissue": "heart_left_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665252", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665252.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665252-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665253", "name": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665253", "category": [ "RNA-Seq", "heart_right_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;49.0 days thoracic aorta constriction sham procedure", "Tissue": "heart_right_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665253", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665253.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665253-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665254", "name": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665254", "category": [ "RNA-Seq", "heart_left_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;1.1 mm dia 49.0 days pulmonary artery occlusion", "Tissue": "heart_left_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665254", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665254.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665254-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665255", "name": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665255", "category": [ "RNA-Seq", "heart_right_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;1.1 mm dia 49.0 days pulmonary artery occlusion", "Tissue": "heart_right_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665255", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665255.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665255-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#d62728" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#d62728" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665256", "name": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665256", "category": [ "RNA-Seq", "heart_left_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;0.6 mm dia 49.0 days thoracic aorta constriction", "Tissue": "heart_left_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665256", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665256.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665256-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#8c564b" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#8c564b" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665257", "name": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665257", "category": [ "RNA-Seq", "heart_right_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;0.6 mm dia 49.0 days thoracic aorta constriction", "Tissue": "heart_right_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665257", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665257.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665257-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#9467bd" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#9467bd" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665258", "name": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665258", "category": [ "RNA-Seq", "heart_left_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;49.0 days thoracic aorta constriction sham procedure", "Tissue": "heart_left_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665258", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665258.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665258-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665259", "name": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665259", "category": [ "RNA-Seq", "heart_right_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;49.0 days thoracic aorta constriction sham procedure", "Tissue": "heart_right_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665259", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665259.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665259-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665260", "name": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665260", "category": [ "RNA-Seq", "heart_left_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;1.1 mm dia 49.0 days pulmonary artery occlusion", "Tissue": "heart_left_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665260", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665260.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665260-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665261", "name": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665261", "category": [ "RNA-Seq", "heart_right_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;1.1 mm dia 49.0 days pulmonary artery occlusion", "Tissue": "heart_right_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665261", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665261.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665261-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#d62728" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#d62728" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665262", "name": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665262", "category": [ "RNA-Seq", "heart_left_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;0.6 mm dia 49.0 days thoracic aorta constriction", "Tissue": "heart_left_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665262", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665262.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665262-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#8c564b" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#8c564b" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665263", "name": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665263", "category": [ "RNA-Seq", "heart_right_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;0.6 mm dia 49.0 days thoracic aorta constriction", "Tissue": "heart_right_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665263", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665263.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665263-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#9467bd" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#9467bd" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665264", "name": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665264", "category": [ "RNA-Seq", "heart_left_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "203.0d;154.0 days pulmonary artery occlusion sham procedure", "Tissue": "heart_left_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665264", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665264.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665264-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#e377c2" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#e377c2" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665265", "name": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665265", "category": [ "RNA-Seq", "heart_right_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "203.0d;154.0 days pulmonary artery occlusion sham procedure", "Tissue": "heart_right_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665265", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665265.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665265-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#7f7f7f" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#7f7f7f" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665266", "name": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665266", "category": [ "RNA-Seq", "heart_left_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "203.0d;1.1 mm dia 154.0 days pulmonary artery occlusion", "Tissue": "heart_left_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665266", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665266.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665266-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#bcbd22" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#bcbd22" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665267", "name": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665267", "category": [ "RNA-Seq", "heart_right_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "203.0d;1.1 mm dia 154.0 days pulmonary artery occlusion", "Tissue": "heart_right_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665267", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665267.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665267-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#17becf" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#17becf" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665268", "name": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665268", "category": [ "RNA-Seq", "heart_left_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "203.0d;1.1 mm dia 154.0 days pulmonary artery occlusion", "Tissue": "heart_left_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665268", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665268.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665268-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#bcbd22" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#bcbd22" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665269", "name": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665269", "category": [ "RNA-Seq", "heart_right_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "203.0d;1.1 mm dia 154.0 days pulmonary artery occlusion", "Tissue": "heart_right_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665269", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665269.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665269-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#17becf" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#17becf" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665270", "name": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665270", "category": [ "RNA-Seq", "heart_left_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "203.0d;154.0 days pulmonary artery occlusion sham procedure", "Tissue": "heart_left_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665270", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665270.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665270-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#e377c2" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#e377c2" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665271", "name": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665271", "category": [ "RNA-Seq", "heart_right_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "203.0d;154.0 days pulmonary artery occlusion sham procedure", "Tissue": "heart_right_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665271", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665271.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665271-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#7f7f7f" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#7f7f7f" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665272", "name": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665272", "category": [ "RNA-Seq", "heart_left_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "203.0d;1.1 mm dia 154.0 days pulmonary artery occlusion", "Tissue": "heart_left_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665272", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665272.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665272-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#bcbd22" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#bcbd22" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665273", "name": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665273", "category": [ "RNA-Seq", "heart_right_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "203.0d;1.1 mm dia 154.0 days pulmonary artery occlusion", "Tissue": "heart_right_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665273", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665273.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665273-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#17becf" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#17becf" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665274", "name": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665274", "category": [ "RNA-Seq", "heart_left_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "231.0d;182.0 days thoracic aorta constriction sham procedure", "Tissue": "heart_left_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665274", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665274.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665274-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665275", "name": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665275", "category": [ "RNA-Seq", "heart_right_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "231.0d;182.0 days thoracic aorta constriction sham procedure", "Tissue": "heart_right_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665275", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665275.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665275-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665276", "name": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665276", "category": [ "RNA-Seq", "heart_left_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "231.0d;182.0 days thoracic aorta constriction sham procedure", "Tissue": "heart_left_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665276", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665276.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665276-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665277", "name": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665277", "category": [ "RNA-Seq", "heart_right_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "231.0d;182.0 days thoracic aorta constriction sham procedure", "Tissue": "heart_right_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665277", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665277.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665277-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665278", "name": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665278", "category": [ "RNA-Seq", "heart_left_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "231.0d;0.6 mm dia 182.0 days thoracic aorta constriction", "Tissue": "heart_left_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665278", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665278.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665278-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665279", "name": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665279", "category": [ "RNA-Seq", "heart_right_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "231.0d;0.6 mm dia 182.0 days thoracic aorta constriction", "Tissue": "heart_right_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665279", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665279.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665279-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#d62728" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#d62728" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665280", "name": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665280", "category": [ "RNA-Seq", "heart_left_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "231.0d;0.6 mm dia 182.0 days thoracic aorta constriction", "Tissue": "heart_left_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665280", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665280.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665280-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665281", "name": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665281", "category": [ "RNA-Seq", "heart_right_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "231.0d;0.6 mm dia 182.0 days thoracic aorta constriction", "Tissue": "heart_right_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665281", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665281.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665281-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#d62728" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#d62728" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665282", "name": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665282", "category": [ "RNA-Seq", "heart_left_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "231.0d;182.0 days thoracic aorta constriction sham procedure", "Tissue": "heart_left_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665282", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665282.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665282-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665283", "name": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665283", "category": [ "RNA-Seq", "heart_right_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "231.0d;182.0 days thoracic aorta constriction sham procedure", "Tissue": "heart_right_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665283", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665283.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665283-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665284", "name": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665284", "category": [ "RNA-Seq", "heart_left_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "231.0d;0.6 mm dia 182.0 days thoracic aorta constriction", "Tissue": "heart_left_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665284", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665284.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665284-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665285", "name": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665285", "category": [ "RNA-Seq", "heart_right_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "231.0d;0.6 mm dia 182.0 days thoracic aorta constriction", "Tissue": "heart_right_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665285", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665285.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665285-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#d62728" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#d62728" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665286", "name": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665286", "category": [ "RNA-Seq", "heart_left_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "231.0d;0.6 mm dia 182.0 days thoracic aorta constriction", "Tissue": "heart_left_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665286", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665286.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665286-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665287", "name": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665287", "category": [ "RNA-Seq", "heart_right_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "231.0d;0.6 mm dia 182.0 days thoracic aorta constriction", "Tissue": "heart_right_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665287", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665287.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665287-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#d62728" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#d62728" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665288", "name": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665288", "category": [ "RNA-Seq", "heart_left_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;49.0 days thoracic aorta constriction sham procedure", "Tissue": "heart_left_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665288", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665288.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665288-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665289", "name": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665289", "category": [ "RNA-Seq", "heart_right_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;49.0 days thoracic aorta constriction sham procedure", "Tissue": "heart_right_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665289", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665289.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665289-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665290", "name": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665290", "category": [ "RNA-Seq", "heart_left_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;1.1 mm dia 49.0 days pulmonary artery occlusion", "Tissue": "heart_left_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665290", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665290.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665290-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665291", "name": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665291", "category": [ "RNA-Seq", "heart_right_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;1.1 mm dia 49.0 days pulmonary artery occlusion", "Tissue": "heart_right_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665291", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665291.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665291-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#d62728" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#d62728" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665292", "name": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665292", "category": [ "RNA-Seq", "heart_left_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;0.6 mm dia 49.0 days thoracic aorta constriction", "Tissue": "heart_left_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665292", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665292.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665292-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#8c564b" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#8c564b" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665293", "name": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665293", "category": [ "RNA-Seq", "heart_right_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;0.6 mm dia 49.0 days thoracic aorta constriction", "Tissue": "heart_right_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665293", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665293.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665293-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#9467bd" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#9467bd" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665294", "name": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665294", "category": [ "RNA-Seq", "interventricular_septum", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;49.0 days thoracic aorta constriction sham procedure", "Tissue": "interventricular_septum", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665294", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665294.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665294-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#9467bd" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#9467bd" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665295", "name": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665295", "category": [ "RNA-Seq", "interventricular_septum", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;1.1 mm dia 49.0 days pulmonary artery occlusion", "Tissue": "interventricular_septum", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665295", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665295.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665295-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#8c564b" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#8c564b" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665296", "name": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665296", "category": [ "RNA-Seq", "interventricular_septum", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;0.6 mm dia 49.0 days thoracic aorta constriction", "Tissue": "interventricular_septum", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665296", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665296.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665296-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#e377c2" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#e377c2" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665297", "name": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665297", "category": [ "RNA-Seq", "interventricular_septum", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;49.0 days thoracic aorta constriction sham procedure", "Tissue": "interventricular_septum", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665297", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665297.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665297-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#9467bd" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#9467bd" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665298", "name": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665298", "category": [ "RNA-Seq", "interventricular_septum", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;1.1 mm dia 49.0 days pulmonary artery occlusion", "Tissue": "interventricular_septum", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665298", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665298.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665298-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#8c564b" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#8c564b" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665299", "name": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665299", "category": [ "RNA-Seq", "interventricular_septum", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;0.6 mm dia 49.0 days thoracic aorta constriction", "Tissue": "interventricular_septum", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665299", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665299.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665299-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#e377c2" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#e377c2" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665300", "name": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665300", "category": [ "RNA-Seq", "heart_left_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;49.0 days thoracic aorta constriction sham procedure", "Tissue": "heart_left_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665300", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665300.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665300-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665301", "name": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665301", "category": [ "RNA-Seq", "heart_right_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;49.0 days thoracic aorta constriction sham procedure", "Tissue": "heart_right_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665301", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665301.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665301-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665302", "name": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665302", "category": [ "RNA-Seq", "heart_left_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;49.0 days thoracic aorta constriction sham procedure", "Tissue": "heart_left_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665302", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665302.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665302-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665303", "name": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665303", "category": [ "RNA-Seq", "heart_right_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;49.0 days thoracic aorta constriction sham procedure", "Tissue": "heart_right_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665303", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665303.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665303-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#ff7f0e" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665304", "name": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665304", "category": [ "RNA-Seq", "heart_left_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;1.1 mm dia 49.0 days pulmonary artery occlusion", "Tissue": "heart_left_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665304", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665304.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665304-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665305", "name": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665305", "category": [ "RNA-Seq", "heart_right_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;1.1 mm dia 49.0 days pulmonary artery occlusion", "Tissue": "heart_right_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665305", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665305.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665305-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#d62728" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#d62728" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665306", "name": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665306", "category": [ "RNA-Seq", "heart_left_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;1.1 mm dia 49.0 days pulmonary artery occlusion", "Tissue": "heart_left_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665306", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665306.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665306-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665307", "name": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665307", "category": [ "RNA-Seq", "heart_right_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;1.1 mm dia 49.0 days pulmonary artery occlusion", "Tissue": "heart_right_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665307", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665307.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665307-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#d62728" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#d62728" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665308", "name": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665308", "category": [ "RNA-Seq", "heart_left_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;1.1 mm dia 49.0 days pulmonary artery occlusion", "Tissue": "heart_left_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665308", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665308.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665308-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665309", "name": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665309", "category": [ "RNA-Seq", "heart_right_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;1.1 mm dia 49.0 days pulmonary artery occlusion", "Tissue": "heart_right_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665309", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665309.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665309-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#d62728" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#d62728" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665310", "name": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665310", "category": [ "RNA-Seq", "heart_left_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;1.1 mm dia 49.0 days pulmonary artery occlusion", "Tissue": "heart_left_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665310", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665310.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_left_ventricle_WKYLEWF1_Ebv_M_GSM6665310-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#2ca02c" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665311", "name": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665311", "category": [ "RNA-Seq", "heart_right_ventricle", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;1.1 mm dia 49.0 days pulmonary artery occlusion", "Tissue": "heart_right_ventricle", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665311", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665311.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_heart_right_ventricle_WKYLEWF1_Ebv_M_GSM6665311-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#d62728" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#d62728" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665312", "name": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665312", "category": [ "RNA-Seq", "interventricular_septum", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "203.0d;1.1 mm dia 154.0 days pulmonary artery occlusion", "Tissue": "interventricular_septum", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665312", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665312.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665312-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#7f7f7f" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#7f7f7f" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665313", "name": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665313", "category": [ "RNA-Seq", "interventricular_septum", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "203.0d;1.1 mm dia 154.0 days pulmonary artery occlusion", "Tissue": "interventricular_septum", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665313", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665313.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665313-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#7f7f7f" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#7f7f7f" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665314", "name": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665314", "category": [ "RNA-Seq", "interventricular_septum", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "203.0d;1.1 mm dia 154.0 days pulmonary artery occlusion", "Tissue": "interventricular_septum", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665314", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665314.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665314-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#7f7f7f" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#7f7f7f" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665315", "name": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665315", "category": [ "RNA-Seq", "interventricular_septum", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "203.0d;154.0 days pulmonary artery occlusion sham procedure", "Tissue": "interventricular_septum", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665315", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665315.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665315-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#bcbd22" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#bcbd22" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665316", "name": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665316", "category": [ "RNA-Seq", "interventricular_septum", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "203.0d;154.0 days pulmonary artery occlusion sham procedure", "Tissue": "interventricular_septum", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665316", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665316.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665316-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#bcbd22" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#bcbd22" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665317", "name": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665317", "category": [ "RNA-Seq", "interventricular_septum", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "231.0d;0.6 mm dia 182.0 days thoracic aorta constriction", "Tissue": "interventricular_septum", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665317", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665317.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665317-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#17becf" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#17becf" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665318", "name": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665318", "category": [ "RNA-Seq", "interventricular_septum", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "231.0d;0.6 mm dia 182.0 days thoracic aorta constriction", "Tissue": "interventricular_septum", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665318", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665318.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665318-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#17becf" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#17becf" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665319", "name": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665319", "category": [ "RNA-Seq", "interventricular_septum", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "231.0d;0.6 mm dia 182.0 days thoracic aorta constriction", "Tissue": "interventricular_septum", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665319", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665319.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665319-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#17becf" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#17becf" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665320", "name": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665320", "category": [ "RNA-Seq", "interventricular_septum", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "231.0d;182.0 days thoracic aorta constriction sham procedure", "Tissue": "interventricular_septum", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665320", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665320.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665320-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665321", "name": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665321", "category": [ "RNA-Seq", "interventricular_septum", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "231.0d;182.0 days thoracic aorta constriction sham procedure", "Tissue": "interventricular_septum", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665321", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665321.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665321-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665322", "name": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665322", "category": [ "RNA-Seq", "interventricular_septum", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "231.0d;182.0 days thoracic aorta constriction sham procedure", "Tissue": "interventricular_septum", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665322", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665322.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665322-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665323", "name": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665323", "category": [ "RNA-Seq", "interventricular_septum", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "231.0d;182.0 days thoracic aorta constriction sham procedure", "Tissue": "interventricular_septum", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665323", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665323.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665323-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#1f77b4" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665324", "name": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665324", "category": [ "RNA-Seq", "interventricular_septum", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;1.1 mm dia 49.0 days pulmonary artery occlusion", "Tissue": "interventricular_septum", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "F", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665324", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665324.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665324-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#8c564b" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#8c564b" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665325", "name": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665325", "category": [ "RNA-Seq", "interventricular_septum", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;1.1 mm dia 49.0 days pulmonary artery occlusion", "Tissue": "interventricular_septum", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665325", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665325.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665325-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#8c564b" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#8c564b" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665326", "name": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665326", "category": [ "RNA-Seq", "interventricular_septum", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;1.1 mm dia 49.0 days pulmonary artery occlusion", "Tissue": "interventricular_septum", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665326", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665326.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665326-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#8c564b" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#8c564b" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665327", "name": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665327", "category": [ "RNA-Seq", "interventricular_septum", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;1.1 mm dia 49.0 days pulmonary artery occlusion", "Tissue": "interventricular_septum", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665327", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665327.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665327-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#8c564b" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#8c564b" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665328", "name": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665328", "category": [ "RNA-Seq", "interventricular_septum", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;0.6 mm dia 49.0 days thoracic aorta constriction", "Tissue": "interventricular_septum", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665328", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665328.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665328-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#e377c2" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#e377c2" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665329", "name": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665329", "category": [ "RNA-Seq", "interventricular_septum", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;0.6 mm dia 49.0 days thoracic aorta constriction", "Tissue": "interventricular_septum", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665329", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665329.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665329-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#e377c2" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#e377c2" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665330", "name": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665330", "category": [ "RNA-Seq", "interventricular_septum", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;0.6 mm dia 49.0 days thoracic aorta constriction", "Tissue": "interventricular_septum", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665330", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665330.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665330-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#e377c2" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#e377c2" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665331", "name": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665331", "category": [ "RNA-Seq", "interventricular_septum", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;0.6 mm dia 49.0 days thoracic aorta constriction", "Tissue": "interventricular_septum", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665331", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665331.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665331-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#e377c2" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#e377c2" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665332", "name": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665332", "category": [ "RNA-Seq", "interventricular_septum", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;49.0 days thoracic aorta constriction sham procedure", "Tissue": "interventricular_septum", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665332", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665332.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665332-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#9467bd" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#9467bd" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665333", "name": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665333", "category": [ "RNA-Seq", "interventricular_septum", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;49.0 days thoracic aorta constriction sham procedure", "Tissue": "interventricular_septum", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665333", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665333.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665333-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#9467bd" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#9467bd" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665334", "name": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665334", "category": [ "RNA-Seq", "interventricular_septum", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;49.0 days thoracic aorta constriction sham procedure", "Tissue": "interventricular_septum", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665334", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665334.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665334-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#9467bd" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#9467bd" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665335", "name": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665335", "category": [ "RNA-Seq", "interventricular_septum", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;49.0 days thoracic aorta constriction sham procedure", "Tissue": "interventricular_septum", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665335", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665335.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665335-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#9467bd" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#9467bd" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665336", "name": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665336", "category": [ "RNA-Seq", "interventricular_septum", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;49.0 days thoracic aorta constriction sham procedure", "Tissue": "interventricular_septum", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665336", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665336.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665336-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#9467bd" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#9467bd" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665337", "name": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665337", "category": [ "RNA-Seq", "interventricular_septum", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;1.1 mm dia 49.0 days pulmonary artery occlusion", "Tissue": "interventricular_septum", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665337", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665337.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665337-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#8c564b" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#8c564b" } }, "defaultRendering": "xyplot" } ] }, { "type": "QuantitativeTrack", "trackId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665338", "name": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665338", "category": [ "RNA-Seq", "interventricular_septum", "WKYLEWF1_Ebv" ], "assemblyNames": [ "GRCr8" ], "metadata": { "Sample Characteristic": "98.0d;0.6 mm dia 49.0 days thoracic aorta constriction", "Tissue": "interventricular_septum", "Strain": "WKYLEWF1_Ebv", "RGD Strain Report": "https://rgd.mcw.edu/rgdweb/report/strain/main.html?id=407550225", "Sex": "M", "Computed Sex": "M", "RGD Metadata Report": "https://rgd.mcw.edu/rgdweb/report/expressionStudy/main.html?geoAcc=GSE216264", "Project Title": "Transcriptome changes in a rat model of progressive heart failure", "Project Repository Link": "https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216264", "Project Accession ID": "GSE216264", "Sample Accession ID": "GSM6665338", "PubMed ID": "PMID:39196177", "Data Processing": "HPC RGD workflow", "Read alignment": "STAR v2.7.10b", "Genome version": "GCF_036323735.1 GRCr8", "Expression Quantification": "RSEM v1.3.1" }, "adapter": { "type": "BigWigAdapter", "bigWigLocation": { "locationType": "UriLocation", "uri": "https://download.rgd.mcw.edu/expression/GSE216264/Genome-wide_read_coverage_BigWig_files/RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665338.bigwig" } }, "displays": [ { "type": "LinearWiggleDisplay", "displayId": "RNAseq_interventricular_septum_WKYLEWF1_Ebv_M_GSM6665338-LinearWiggleDisplay", "renderer": { "type": "XYPlotRenderer", "color1": "#e377c2" }, "renderers": { "XYPlotRenderer": { "type": "XYPlotRenderer", "color1": "#e377c2" } }, "defaultRendering": "xyplot" } ] } ] } }