Workflow: expression values from HPC RGD workflow (processed before workflow 2.1); computed sex, strand and library prep added by RGD attribute backfill 1.0 (2026-10-20) using the workflow 2.1 rules. Note: ComputedSex is called from sex-gene expression: R = (Xist TPM + 1) / (median TPM of Uty, Ddx3y, Kdm5d and Eif2s3y + 1); R >= 10 is called F, R <= 1 is called M, and other values, or samples where Xist and the Y-gene median are both below 1 TPM, are Undetermined. Females express Xist and males the Y-linked genes. Sry is reported but not used in the calculation. XYRatio (X:Y read coverage) is shown for reference only. Agreement compares ComputedSex with InputSex (submitted to GEO).
SampleID	InputSex	ComputedSex	XYRatio	Agreement	Xist	Uty	Sry	Ddx3y	Kdm5d	Eif2s3y	ComputedStrand	ComputedLibraryPrep	PctMRNA	PctIntronic	PctIntergenic	PctRibosomal	UniqPct	MultiPct	TooShortPct	NonPolyA_perM	LibraryPrepRule	LibraryPrepQC	LibraryPrepReason
GSM4458815	M	M	NA	Agree	0.31	17.23	0.00	44.63	31.54	50.24	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.516363	0.389569	0.065942	0.028126	88.20	7.47	2.11	5049	LP2 (2026-09-30)	PASS	NonPolyA_perM 5049 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458816	M	M	NA	Agree	0.14	11.97	0.00	45.86	21.31	52.20	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.692292	0.225368	0.073969	0.008371	87.53	8.11	1.75	6233	LP2 (2026-09-30)	PASS	NonPolyA_perM 6233 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458817	M	M	NA	Agree	0.10	11.18	0.00	42.38	17.60	37.76	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.679789	0.22749	0.081112	0.011609	86.56	8.93	1.57	7635	LP2 (2026-09-30)	PASS	NonPolyA_perM 7635 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458818	M	M	NA	Agree	0.17	14.68	0.00	46.29	22.42	48.80	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.694058	0.220822	0.07254	0.01258	87.49	7.76	2.33	5487	LP2 (2026-09-30)	PASS	NonPolyA_perM 5487 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458819	M	M	NA	Agree	0.06	10.18	0.00	38.26	17.00	37.26	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.595511	0.208629	0.05809	0.13777	78.33	18.40	1.19	4762	LP2 (2026-09-30)	PASS	NonPolyA_perM 4762 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458820	M	M	NA	Agree	0.13	6.78	0.00	22.52	12.86	16.36	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.34125	0.13835	0.038645	0.481756	46.32	48.76	3.69	4377	LP2 (2026-09-30)	LOW_MAPPING	NonPolyA_perM 4377 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458821	M	M	NA	Agree	0.07	8.87	0.00	34.48	16.37	38.69	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.727816	0.16346	0.080765	0.027959	84.76	10.72	1.70	7074	LP2 (2026-09-30)	PASS	NonPolyA_perM 7074 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458822	M	M	NA	Agree	0.10	8.56	0.00	34.72	16.27	38.98	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.717249	0.166934	0.076385	0.039431	84.22	11.40	1.76	6640	LP2 (2026-09-30)	PASS	NonPolyA_perM 6640 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458823	M	M	NA	Agree	0.07	6.82	0.00	26.56	10.70	28.92	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.643909	0.140799	0.078572	0.13672	73.51	20.91	2.66	8771	LP2 (2026-09-30)	PASS	NonPolyA_perM 8771 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458824	M	M	NA	Agree	0.12	8.27	0.00	29.31	11.47	31.11	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.691676	0.162646	0.072677	0.073	81.90	14.08	1.66	6245	LP2 (2026-09-30)	PASS	NonPolyA_perM 6245 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458825	M	M	NA	Agree	0.43	22.79	0.00	68.43	33.58	54.02	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.563331	0.359656	0.064092	0.012921	89.92	6.00	1.81	7001	LP2 (2026-09-30)	PASS	NonPolyA_perM 7001 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458826	M	M	NA	Agree	0.44	26.57	0.00	74.23	36.59	56.77	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.543622	0.374146	0.056373	0.025858	89.68	6.38	2.01	5863	LP2 (2026-09-30)	PASS	NonPolyA_perM 5863 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458827	M	M	NA	Agree	0.24	21.58	1.35	64.29	28.87	52.01	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.565964	0.335548	0.058414	0.040075	87.38	8.56	1.73	7196	LP2 (2026-09-30)	PASS	NonPolyA_perM 7196 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458828	M	M	NA	Agree	0.58	18.87	0.00	50.99	24.61	37.51	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.477276	0.370963	0.048253	0.103507	83.84	13.19	1.47	3979	LP2 (2026-09-30)	PASS	NonPolyA_perM 3979 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458829	M	M	NA	Agree	0.44	17.43	0.00	51.14	25.49	40.65	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.537721	0.344139	0.056241	0.0619	86.37	10.30	1.32	6542	LP2 (2026-09-30)	PASS	NonPolyA_perM 6542 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458830	M	M	NA	Agree	0.30	17.73	0.00	52.87	23.59	42.43	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.594418	0.273344	0.058236	0.074001	84.19	11.94	1.68	6479	LP2 (2026-09-30)	PASS	NonPolyA_perM 6479 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458831	M	M	NA	Agree	0.24	15.14	0.00	46.44	19.55	31.35	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.533992	0.290608	0.050625	0.124775	80.83	15.81	1.67	5012	LP2 (2026-09-30)	PASS	NonPolyA_perM 5012 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458832	M	M	NA	Agree	0.49	20.24	0.00	52.94	26.03	45.11	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.541589	0.335025	0.052648	0.070737	85.68	10.89	1.54	6058	LP2 (2026-09-30)	PASS	NonPolyA_perM 6058 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458833	M	M	NA	Agree	0.32	17.22	0.00	49.90	23.92	41.78	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.522866	0.320104	0.051889	0.105141	82.76	13.82	1.65	5315	LP2 (2026-09-30)	PASS	NonPolyA_perM 5315 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458834	M	M	NA	Agree	0.23	15.43	0.00	48.05	21.09	36.54	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.591747	0.265395	0.053648	0.089211	83.42	12.77	2.06	5667	LP2 (2026-09-30)	PASS	NonPolyA_perM 5667 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458835	M	M	NA	Agree	0.09	8.52	0.00	31.09	14.23	31.89	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.605113	0.12865	0.053931	0.212306	70.98	25.63	1.24	5842	LP2 (2026-09-30)	PASS	NonPolyA_perM 5842 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458836	M	M	NA	Agree	0.05	10.86	0.00	40.38	14.04	37.52	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.656734	0.109844	0.047748	0.185674	74.13	22.72	1.46	3552	LP2 (2026-09-30)	PASS	NonPolyA_perM 3552 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458837	M	M	NA	Agree	0.19	11.76	0.00	36.10	14.97	30.50	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.476719	0.176789	0.042968	0.303524	64.25	32.75	1.33	4946	LP2 (2026-09-30)	PASS	NonPolyA_perM 4946 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458838	M	M	NA	Agree	0.43	19.95	0.00	55.85	29.31	52.15	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.534917	0.342165	0.052936	0.069982	85.84	10.64	1.53	6235	LP2 (2026-09-30)	PASS	NonPolyA_perM 6235 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458839	M	M	NA	Agree	0.23	16.55	0.00	48.20	21.51	38.14	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.542336	0.24259	0.050377	0.164697	77.12	19.73	1.42	4921	LP2 (2026-09-30)	PASS	NonPolyA_perM 4921 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458840	M	M	NA	Agree	0.34	18.93	0.00	51.73	22.98	40.11	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.563873	0.263325	0.051797	0.121005	80.49	15.81	1.66	5888	LP2 (2026-09-30)	PASS	NonPolyA_perM 5888 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458841	M	M	NA	Agree	0.24	13.61	0.00	43.17	19.29	34.00	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.558126	0.244627	0.053567	0.14368	78.69	17.98	1.36	5752	LP2 (2026-09-30)	PASS	NonPolyA_perM 5752 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458842	M	M	NA	Agree	0.29	14.33	0.00	45.34	21.78	39.84	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.600963	0.234782	0.054709	0.109546	81.87	14.87	1.47	5224	LP2 (2026-09-30)	PASS	NonPolyA_perM 5224 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458843	M	M	NA	Agree	0.21	11.00	0.00	44.65	16.50	39.15	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.756138	0.131545	0.073341	0.038976	83.43	10.44	4.10	9023	LP2 (2026-09-30)	PASS	NonPolyA_perM 9023 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458844	M	M	NA	Agree	0.16	14.46	0.00	46.56	18.64	36.89	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.593037	0.208045	0.168373	0.030545	81.71	9.45	5.01	6873	LP2 (2026-09-30)	PASS	NonPolyA_perM 6873 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458845	M	M	NA	Agree	0.08	11.53	0.00	42.30	14.51	40.09	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.777817	0.124169	0.085765	0.012248	84.93	9.62	3.03	9758	LP2 (2026-09-30)	PASS	NonPolyA_perM 9758 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458846	M	M	NA	Agree	0.10	17.20	0.00	53.37	16.85	45.03	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.56236	0.237733	0.183212	0.016695	82.55	8.65	4.84	10323	LP2 (2026-09-30)	PASS	NonPolyA_perM 10323 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458847	M	M	NA	Agree	0.04	9.29	0.00	33.05	15.72	32.38	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.771501	0.118901	0.083283	0.026315	83.88	10.81	3.35	6797	LP2 (2026-09-30)	PASS	NonPolyA_perM 6797 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458848	M	M	NA	Agree	0.14	10.79	0.00	36.04	15.53	30.88	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.781303	0.114193	0.080583	0.023921	85.04	10.30	2.61	6576	LP2 (2026-09-30)	PASS	NonPolyA_perM 6576 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458849	M	M	NA	Agree	0.06	8.90	0.00	25.48	10.77	24.23	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.726049	0.133675	0.11413	0.026145	78.62	14.86	3.18	9291	LP2 (2026-09-30)	PASS	NonPolyA_perM 9291 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458850	M	M	NA	Agree	0.17	17.08	0.00	56.79	19.89	49.89	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.772758	0.146535	0.07315	0.007557	87.85	7.56	2.27	8961	LP2 (2026-09-30)	PASS	NonPolyA_perM 8961 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458851	M	M	NA	Agree	0.13	18.27	0.00	61.25	26.82	52.26	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.692537	0.223865	0.064329	0.019269	87.57	6.72	3.90	7936	LP2 (2026-09-30)	PASS	NonPolyA_perM 7936 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458852	M	M	NA	Agree	0.23	17.43	0.00	48.66	22.13	47.21	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.699121	0.213553	0.075746	0.01158	87.08	7.47	3.15	8979	LP2 (2026-09-30)	PASS	NonPolyA_perM 8979 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458853	M	M	NA	Agree	0.03	17.68	0.00	57.19	21.09	50.41	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.727374	0.167711	0.077348	0.027566	84.71	10.20	2.98	6845	LP2 (2026-09-30)	PASS	NonPolyA_perM 6845 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458854	M	M	NA	Agree	0.11	18.28	0.00	57.59	24.06	60.11	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.737103	0.171339	0.071587	0.019972	86.14	8.41	3.32	9598	LP2 (2026-09-30)	PASS	NonPolyA_perM 9598 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458855	M	M	NA	Agree	0.14	12.15	0.00	43.11	20.39	41.81	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.712379	0.177289	0.07223	0.038103	82.21	9.81	5.72	8426	LP2 (2026-09-30)	PASS	NonPolyA_perM 8426 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458856	M	M	NA	Agree	0.14	14.17	0.00	46.92	21.51	40.48	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.717137	0.183884	0.069315	0.029664	84.10	8.62	5.09	8694	LP2 (2026-09-30)	PASS	NonPolyA_perM 8694 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458857	M	M	NA	Agree	0.17	13.05	0.00	51.45	18.44	45.15	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.712815	0.170967	0.065177	0.051041	83.62	10.63	3.69	9124	LP2 (2026-09-30)	PASS	NonPolyA_perM 9124 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458858	M	M	NA	Agree	0.06	15.17	0.00	54.04	20.95	48.10	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.716218	0.183487	0.074115	0.02618	84.76	9.04	3.94	10651	LP2 (2026-09-30)	PASS	NonPolyA_perM 10651 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458859	M	M	NA	Agree	0.20	14.97	0.00	54.01	23.05	46.48	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.711738	0.189958	0.067281	0.031023	85.74	8.53	3.78	8371	LP2 (2026-09-30)	PASS	NonPolyA_perM 8371 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458860	M	M	NA	Agree	0.17	12.79	0.00	52.93	21.09	43.94	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.74162	0.164227	0.06622	0.027933	84.72	8.47	4.80	7598	LP2 (2026-09-30)	PASS	NonPolyA_perM 7598 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458861	M	M	NA	Agree	0.21	14.31	0.00	48.96	21.99	43.98	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.723167	0.190649	0.069577	0.016607	86.16	7.35	4.32	8451	LP2 (2026-09-30)	PASS	NonPolyA_perM 8451 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458862	M	M	NA	Agree	0.06	16.33	2.24	59.14	22.35	50.96	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.727361	0.186155	0.072662	0.013822	85.41	7.47	4.75	9388	LP2 (2026-09-30)	PASS	NonPolyA_perM 9388 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458863	M	M	NA	Agree	0.13	17.74	0.00	48.48	25.56	40.70	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.718445	0.192969	0.065554	0.023032	86.14	7.57	4.24	7606	LP2 (2026-09-30)	PASS	NonPolyA_perM 7606 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458864	M	M	NA	Agree	0.14	19.84	0.00	63.87	26.43	52.06	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.713692	0.204109	0.064172	0.018027	87.67	6.82	3.63	7685	LP2 (2026-09-30)	PASS	NonPolyA_perM 7685 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458865	M	M	NA	Agree	0.16	21.36	0.00	72.74	30.46	67.82	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.728947	0.195436	0.058037	0.01758	88.01	6.43	3.84	6054	LP2 (2026-09-30)	PASS	NonPolyA_perM 6054 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458866	M	M	NA	Agree	0.16	17.41	0.00	61.63	26.13	60.46	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.693701	0.226172	0.072941	0.007186	87.68	6.83	3.36	9878	LP2 (2026-09-30)	PASS	NonPolyA_perM 9878 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458867	M	M	NA	Agree	0.08	12.65	0.00	43.59	20.06	39.41	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.695073	0.162223	0.05915	0.083554	81.97	12.74	3.68	6230	LP2 (2026-09-30)	PASS	NonPolyA_perM 6230 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458868	M	M	NA	Agree	0.10	12.39	0.00	40.54	18.61	36.32	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.704513	0.164174	0.062774	0.068539	83.74	11.95	2.57	6211	LP2 (2026-09-30)	PASS	NonPolyA_perM 6211 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458869	M	M	NA	Agree	0.19	14.19	0.00	41.31	20.60	40.98	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.699769	0.205177	0.071738	0.023316	85.90	8.41	3.61	8410	LP2 (2026-09-30)	PASS	NonPolyA_perM 8410 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458870	M	M	NA	Agree	0.12	16.08	0.00	54.55	23.99	41.23	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.718277	0.197105	0.0615	0.023118	87.47	7.33	3.47	6781	LP2 (2026-09-30)	PASS	NonPolyA_perM 6781 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458871	M	M	NA	Agree	0.08	12.48	0.00	31.56	17.74	29.72	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.691345	0.182274	0.077458	0.048923	82.18	12.23	3.53	5231	LP2 (2026-09-30)	PASS	NonPolyA_perM 5231 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458872	M	M	NA	Agree	0.10	10.18	0.00	33.96	15.25	24.36	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.694401	0.17552	0.078828	0.051251	82.27	12.29	3.20	7964	LP2 (2026-09-30)	PASS	NonPolyA_perM 7964 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458873	M	M	NA	Agree	0.11	9.90	0.00	24.06	13.57	26.82	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.68623	0.172513	0.099427	0.04183	79.71	14.48	2.97	5774	LP2 (2026-09-30)	PASS	NonPolyA_perM 5774 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458874	M	M	NA	Agree	0.20	18.22	0.00	57.75	21.38	49.66	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.681386	0.232356	0.063722	0.022536	87.56	7.15	3.40	8264	LP2 (2026-09-30)	PASS	NonPolyA_perM 8264 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458875	M	M	NA	Agree	0.12	13.24	0.00	46.31	21.46	43.33	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.671693	0.210815	0.056996	0.060496	84.76	10.09	3.60	6545	LP2 (2026-09-30)	PASS	NonPolyA_perM 6545 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458876	M	M	NA	Agree	0.21	16.32	0.00	36.89	20.19	31.88	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.580476	0.30462	0.076093	0.038812	85.83	9.31	2.64	8103	LP2 (2026-09-30)	PASS	NonPolyA_perM 8103 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458877	M	M	NA	Agree	0.29	15.05	0.00	44.10	19.88	39.05	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.679907	0.207278	0.069092	0.043723	84.34	10.38	3.21	8302	LP2 (2026-09-30)	PASS	NonPolyA_perM 8302 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not
GSM4458878	M	M	NA	Agree	0.40	18.00	0.00	58.46	31.37	52.06	SECOND_READ_TRANSCRIPTION_STRAND	RRNA_DEPLETED	0.542955	0.327067	0.058321	0.071657	83.98	10.69	3.83	6612	LP2 (2026-09-30)	PASS	NonPolyA_perM 6612 >= 700: non-polyadenylated small RNAs retained, as rRNA depletion does and oligo-dT selection does not