# RGD-PIPELINE: ftp-file-extracts # MODULE: annotations-version-1.1.9 (Oct 10, 2019) # GENERATED-ON: 2023/02/25 # PURPOSE: annotations about active Chinchilla objects extracted from RGD database # ONTOLOGY: MP: Mammalian Phenotype # CONTACT: rgd.data@mcw.edu # FORMAT: tab delimited text # NOTES: multiple values in a single column are separated by '|' # #COLUMN INFORMATION: # #1 RGD_ID unique RGD_ID of the annotated object #2 OBJECT_SYMBOL official symbol of the annotated object #3 OBJECT_NAME official name of the annotated object #4 OBJECT_TYPE annotated object data type: one of ['gene','qtl','strain'] #5 TERM_ACC_ID ontology term accession id #6 TERM_NAME ontology term name #7 QUALIFIER optional qualifier #8 EVIDENCE evidence #9 WITH with info #10 ASPECT aspect #11 REFERENCES db references (Reference RGDID|PUBMED ID) #12 CREATED_DATE created date #13 ASSIGNED_BY assigned by #14 MESH_OMIM_ID MESH:xxx or OMIM:xxx id corresponding to RDO:xxx id found in TERM_ACC_ID column (RGD/CTD Disease Ontology annotations only) #15 CURATION_NOTES curation notes provided by RGD curators #16 ORIGINAL_REFERENCE original reference RGD_ID OBJECT_SYMBOL OBJECT_NAME OBJECT_TYPE TERM_ACC_ID TERM_NAME QUALIFIER EVIDENCE WITH ASPECT REFERENCES CREATED_DATE ASSIGNED_BY MESH_OMIM_ID CURATION_NOTES ORIGINAL_REFERENCE 8742383 Lrp1 LDL receptor related protein 1 gene MP:0001651 obsolete necrosis ISO RGD:1307535 P RGD:9068941 20230223 RGD PMID:24865476|REF_RGD_ID:13800516 8749983 Hspa9 heat shock protein family A (Hsp70) member 9 gene MP:0001651 obsolete necrosis ISO RGD:1311806 P RGD:9068941 20230223 RGD PMID:22965249|REF_RGD_ID:13432139 8797119 Cacybp calcyclin binding protein gene MP:0001651 obsolete necrosis ISO RGD:1303146 P RGD:9068941 20230223 RGD PMID:16440310|REF_RGD_ID:2326117 8805780 Rhoa ras homolog family member A gene MP:0001651 obsolete necrosis ISO RGD:619921 P RGD:9068941 20230223 RGD PMID:20858895|REF_RGD_ID:7242937 8904889 Kdm4a lysine demethylase 4A gene MP:0001651 obsolete necrosis ISO RGD:1306378 P RGD:9068941 20230223 RGD PMID:24747049|REF_RGD_ID:9587433 8948078 Kcnk2 potassium two pore domain channel subfamily K member 2 gene MP:0001651 obsolete necrosis ISO RGD:621448 P RGD:9068941 20230223 RGD PMID:24705172|REF_RGD_ID:9831164 8988157 Arhgef1 Rho guanine nucleotide exchange factor 1 gene MP:0001651 obsolete necrosis ISO RGD:620951 P RGD:9068941 20230223 RGD PMID:20858895|REF_RGD_ID:7242937 9004368 Ppp1r15a protein phosphatase 1, regulatory subunit 15A gene MP:0001651 obsolete necrosis ISO RGD:621526 P RGD:9068941 20230225 RGD PMID:21925170|REF_RGD_ID:9999170 9019253 Ccn2 cellular communication network factor 2 gene MP:0001651 obsolete necrosis ISO RGD:621392 P RGD:9068941 20230223 RGD PMID:20858895|REF_RGD_ID:7242937